AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1401020

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1401020 MtrunA17_Chr7g0274481 97.117 1006 24 2 1 1003 1 1004 0.0 1983
Msa1401020 MtrunA17_Chr5g0397691 94.754 610 29 2 1 610 1 607 0.0 1097
Msa1401020 MtrunA17_Chr5g0397681 87.755 49 6 0 629 677 1 49 5.95e-23 92.8
Msa1401020 MtrunA17_Chr7g0238631 40.187 107 61 3 6 110 61 166 2.71e-14 77.0
Msa1401020 MtrunA17_Chr7g0238631 32.558 129 75 3 8 135 114 231 3.52e-11 67.0
Msa1401020 MtrunA17_Chr8g0362231 35.789 95 60 1 9 102 24 118 3.98e-13 72.8
Msa1401020 MtrunA17_Chr5g0416341 35.514 107 64 2 9 114 28 130 9.02e-13 72.0
Msa1401020 MtrunA17_Chr1g0157731 35.644 101 63 2 8 106 40 140 2.42e-12 71.2
Msa1401020 MtrunA17_Chr3g0139671 36.364 99 61 2 8 104 34 132 3.41e-12 70.9
Msa1401020 MtrunA17_Chr3g0139671 38.202 89 53 2 4 91 83 170 3.53e-12 70.9
Msa1401020 MtrunA17_Chr6g0483051 37.500 96 58 2 10 104 72 166 2.44e-11 67.8
Msa1401020 MtrunA17_Chr6g0460671 37.647 85 52 1 8 91 100 184 3.71e-11 65.9
Msa1401020 MtrunA17_Chr5g0397841 39.759 83 49 1 10 91 113 195 4.60e-11 66.6
Msa1401020 MtrunA17_Chr7g0240821 36.667 90 52 3 7 94 2 88 6.25e-11 63.5
Msa1401020 MtrunA17_Chr5g0417621 37.647 85 52 1 8 91 135 219 7.88e-11 65.5
Msa1401020 MtrunA17_Chr6g0480581 36.585 82 52 0 4 85 1 82 9.60e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1401020 AT1G09770.1 75.366 820 194 5 1 817 1 815 0.0 1216
Msa1401020 AT5G02320.1 39.252 107 62 3 6 110 75 180 5.91e-14 76.3
Msa1401020 AT5G02320.2 39.252 107 62 3 6 110 75 180 5.91e-14 76.3
Msa1401020 AT5G11510.3 38.095 105 63 2 8 110 30 134 7.59e-14 76.6
Msa1401020 AT5G11510.1 38.095 105 63 2 8 110 30 134 7.59e-14 76.6
Msa1401020 AT5G11510.4 38.095 105 63 2 8 110 30 134 7.59e-14 76.6
Msa1401020 AT5G02320.3 39.252 107 62 3 6 110 15 120 7.64e-14 75.9
Msa1401020 AT3G18100.1 36.458 96 60 1 8 102 547 642 1.25e-13 75.9
Msa1401020 AT5G11510.2 38.095 105 63 2 8 110 30 134 1.54e-13 75.5
Msa1401020 AT5G11510.5 38.095 105 63 2 8 110 30 134 1.60e-13 75.5
Msa1401020 AT3G18100.3 36.458 96 60 1 8 102 499 594 2.59e-13 74.7
Msa1401020 AT3G18100.4 36.458 96 60 1 8 102 386 481 2.76e-13 74.7
Msa1401020 AT3G18100.2 36.458 96 60 1 8 102 334 429 4.70e-13 73.9
Msa1401020 AT4G33450.1 40.000 85 50 1 8 91 20 104 3.65e-12 68.2
Msa1401020 AT2G02820.1 31.933 119 66 2 9 112 32 150 3.97e-12 70.1
Msa1401020 AT3G09370.1 38.318 107 63 3 6 110 78 183 4.00e-12 70.5
Msa1401020 AT2G02820.2 31.933 119 66 2 9 112 32 150 4.07e-12 70.5
Msa1401020 AT3G09370.2 38.318 107 63 3 6 110 83 188 4.30e-12 70.5
Msa1401020 AT3G09370.3 38.318 107 63 3 6 110 91 196 6.10e-12 69.7
Msa1401020 AT3G27920.1 33.645 107 69 2 6 110 15 121 7.19e-12 66.6
Msa1401020 AT1G14350.2 34.375 96 62 1 9 103 27 122 8.34e-12 68.9
Msa1401020 AT1G14350.1 34.375 96 62 1 9 103 27 122 8.34e-12 68.9
Msa1401020 AT2G02820.3 31.933 119 66 2 9 112 32 150 1.16e-11 67.8
Msa1401020 AT5G40360.1 37.805 82 51 0 4 85 155 236 1.27e-11 67.8
Msa1401020 AT4G18770.1 40.000 85 50 1 8 91 218 302 2.25e-11 67.8
Msa1401020 AT1G17950.1 36.667 90 56 1 3 91 1 90 3.07e-11 65.5
Msa1401020 AT5G17800.1 38.824 85 51 1 8 91 94 178 3.18e-11 66.2
Msa1401020 AT4G32730.5 34.343 99 63 2 8 104 36 134 3.20e-11 68.2
Msa1401020 AT4G32730.4 34.343 99 63 2 8 104 36 134 3.20e-11 68.2
Msa1401020 AT4G32730.3 34.343 99 63 2 8 104 36 134 3.20e-11 68.2
Msa1401020 AT4G32730.2 34.343 99 63 2 8 104 36 134 3.20e-11 68.2
Msa1401020 AT5G14750.1 36.264 91 56 2 6 94 17 107 3.76e-11 63.9
Msa1401020 AT4G32730.1 34.343 99 63 2 8 104 36 134 5.22e-11 67.4
Msa1401020 AT1G26780.1 38.824 85 51 1 8 91 99 183 6.66e-11 64.7
Msa1401020 AT1G69560.1 37.500 88 54 1 5 91 105 192 8.02e-11 65.1
Msa1401020 AT1G73410.2 40.000 90 53 1 3 91 2 91 8.97e-11 63.2
Msa1401020 AT1G69560.2 37.500 88 54 1 5 91 121 208 9.97e-11 65.1

Find 329 sgRNAs with CRISPR-Local

Find 552 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATCTCTTTCTAACTGTTTC+TGG 0.008572 tig0022499:+21958 None:intergenic
CTCTTCTATTGCATGATTCT+TGG 0.126525 tig0022499:+17919 None:intergenic
ATCCACATCCATGTCAATTT+TGG 0.165168 tig0022499:+17730 None:intergenic
ATGCAATTCATTCGGATATC+TGG 0.166956 tig0022499:+17347 None:intergenic
TGCCGGCGTCATACCACTTC+TGG 0.183947 tig0022499:+21543 None:intergenic
CTCTTCTATTGCACGATTCT+TGG 0.192329 tig0022499:+17973 None:intergenic
ATTTCATAACAGCAGCTTTC+AGG 0.225007 tig0022499:+22763 None:intergenic
GGAGTAAGGCCTGCACTTCC+AGG 0.240853 tig0022499:+21565 None:intergenic
TTGGGTGTCTGTGGATAATT+AGG 0.241982 tig0022499:+21805 None:intergenic
CATGATGGAAGCTGAAAATT+TGG 0.248037 tig0022499:-21722 Msa1401020:CDS
TGGCATCTCTGGAGCTTATT+AGG 0.252115 tig0022499:-21174 Msa1401020:CDS
TGTCTATCATGAGAATATTA+TGG 0.255255 tig0022499:+17041 None:intergenic
ATAGCTAGGGTTCTGATAAT+TGG 0.269879 tig0022499:+23503 None:intergenic
ATGTTGGTGATGAGCTATTT+TGG 0.272374 tig0022499:-17232 Msa1401020:three_prime_UTR
GGTCGCGCAGGCTTTGATTC+AGG 0.281831 tig0022499:+22423 None:intergenic
GTTCTCTGAGGAGTTCTTAA+AGG 0.283026 tig0022499:+21769 None:intergenic
AAAGCTGCTGTTATGAAATA+TGG 0.287568 tig0022499:-22759 Msa1401020:CDS
GAATTGGTTGCATCACTATC+TGG 0.302904 tig0022499:+21344 None:intergenic
TTCTGGGTCATTCAGCTTGT+TGG 0.304170 tig0022499:+21975 None:intergenic
CGGGGTCACTCCTAAGAAAA+AGG 0.305366 tig0022499:-21629 Msa1401020:CDS
AAAGGAGCTTCTAGCCTTAC+TGG 0.309592 tig0022499:-21071 Msa1401020:CDS
GATAGTTTACCCCATCTAAA+AGG 0.312071 tig0022499:+17166 None:intergenic
TAAAGGAGATGAGGCAAATT+AGG 0.312615 tig0022499:-17441 Msa1401020:exon
AGTCCACTCAGTCTTCTTAA+TGG 0.314486 tig0022499:+22647 None:intergenic
CCCTGTCATAGAAGATTATC+AGG 0.315605 tig0022499:-20960 Msa1401020:CDS
CCATTGCCTCACGAAGATAC+TGG 0.317289 tig0022499:+20160 None:intergenic
ATCTCTTTCTAACTGTTTCT+GGG 0.335857 tig0022499:+21959 None:intergenic
TAGGCCTCCTCTGGCATCTC+TGG 0.337343 tig0022499:-21185 Msa1401020:CDS
TCTTCAGCATCTTCTTGAAT+TGG 0.338010 tig0022499:+21328 None:intergenic
CACATAGGATAAACAATCTT+TGG 0.341698 tig0022499:-18132 Msa1401020:CDS
ATCTCGTCGGCTTGCTCAAT+AGG 0.342238 tig0022499:+21100 None:intergenic
TATTATGGAAAGTCTATATA+GGG 0.343529 tig0022499:+17056 None:intergenic
AGCGGAGTTATGCTATTATC+AGG 0.347966 tig0022499:+17488 None:intergenic
AGGCCCATTTGCTGCTCGTT+TGG 0.348925 tig0022499:+20988 None:intergenic
GAAGGAGTCAGCAGTGGGTT+TGG 0.354854 tig0022499:+21595 None:intergenic
TGATAATTGGTTTGGTTTCA+CGG 0.356797 tig0022499:+23516 None:intergenic
CTCCGAAGGGAACTCCTCTC+AGG 0.358383 tig0022499:-21495 Msa1401020:CDS
TCCTCGGCAGGAGGTGCATC+TGG 0.361519 tig0022499:+17665 None:intergenic
TTTGTATTCCTCTCACGAAA+TGG 0.364059 tig0022499:+22851 None:intergenic
AATGATCATAAGTAAAGGTT+TGG 0.367626 tig0022499:-17301 Msa1401020:three_prime_UTR
TCAAGTTCTTCAATAGTAGT+AGG 0.370329 tig0022499:+22099 None:intergenic
TAGGGTTCTGATAATTGGTT+TGG 0.371813 tig0022499:+23508 None:intergenic
GCTTGAGGAGATAGCAAATA+AGG 0.373696 tig0022499:-21026 Msa1401020:CDS
AAAATGTAATGGAGCACTTC+AGG 0.374473 tig0022499:-18027 Msa1401020:CDS
TGGGAATCCAGATGAGATTA+TGG 0.375690 tig0022499:-17525 Msa1401020:CDS
CCTTGACACCGCTTGTGTTA+AGG 0.376504 tig0022499:-22508 Msa1401020:CDS
ATATTATGGAAAGTCTATAT+AGG 0.377044 tig0022499:+17055 None:intergenic
AGAAGAAGAGGCACGGCAGC+AGG 0.379807 tig0022499:-21251 Msa1401020:CDS
AAAGGAGTCTTGGCTTGGTT+GGG 0.383959 tig0022499:+21787 None:intergenic
CACTTTCCATGCAATTCATT+CGG 0.387103 tig0022499:+17339 None:intergenic
GAAGCTTCCATAATCTCATC+TGG 0.387389 tig0022499:+17518 None:intergenic
TCTCGTCGGCTTGCTCAATA+GGG 0.387795 tig0022499:+21101 None:intergenic
TCAGATTTCCGATCAAGAAT+TGG 0.388348 tig0022499:-21914 Msa1401020:CDS
GAAGAGGTATGGGGATCTTA+TGG 0.394094 tig0022499:-18068 Msa1401020:CDS
AGGCTGCTGGGATTGATATA+AGG 0.394781 tig0022499:-22242 Msa1401020:CDS
GCAGGCTTTGATTCAGGATT+CGG 0.400720 tig0022499:+22429 None:intergenic
AAAATGAGGATTATGATAAA+GGG 0.404294 tig0022499:-22816 Msa1401020:CDS
GATACCTGCGGTTTGGTGAC+AGG 0.404890 tig0022499:+23416 None:intergenic
TCATCTGGATTCCCAACATC+TGG 0.408875 tig0022499:+17533 None:intergenic
TTATGATAAAGGGAGGTGTT+TGG 0.408987 tig0022499:-22806 Msa1401020:CDS
CTTGCATGGTGGCTATTTGC+TGG 0.409297 tig0022499:+17771 None:intergenic
TCTGCAACCCCTGGAAGTGC+AGG 0.411721 tig0022499:-21574 Msa1401020:CDS
GGATCCAAACGAGCAGCAAA+TGG 0.417377 tig0022499:-20992 Msa1401020:CDS
GCTACATATCAATGAAGATA+TGG 0.420115 tig0022499:-21467 Msa1401020:CDS
TAAGGCAGCGGAGGAGGAAA+AGG 0.424744 tig0022499:-22224 Msa1401020:CDS
TAGATAGACCATAGGCGTTA+CGG 0.425437 tig0022499:+20061 None:intergenic
TTCTTAAAGGAGTCTTGGCT+TGG 0.428361 tig0022499:+21782 None:intergenic
GCCGGCGTCATACCACTTCT+GGG 0.428742 tig0022499:+21544 None:intergenic
TTGGATGAAATTGCCAAGTT+GGG 0.429250 tig0022499:-21895 Msa1401020:CDS
TATGGTCTATCTAGTGTTGC+TGG 0.431068 tig0022499:-20051 Msa1401020:CDS
TGCATCCTTCAGATTTCTCC+GGG 0.432408 tig0022499:-21648 Msa1401020:CDS
TGTGAGAGGCAAGGCAGCTA+GGG 0.432419 tig0022499:+23004 None:intergenic
GCGACCTGATCCTGTTGATA+TGG 0.436108 tig0022499:-22406 Msa1401020:CDS
AGCTTTCAGGATTTCATCCT+CGG 0.436489 tig0022499:+22776 None:intergenic
GTTTGAGAAGAGGCCTCCTC+CGG 0.436599 tig0022499:-22172 Msa1401020:CDS
CAGTATCTTCGTGAGGCAAT+GGG 0.437430 tig0022499:-20159 Msa1401020:CDS
TCCTCTTCAATCTTCTCCTC+AGG 0.438758 tig0022499:+21304 None:intergenic
TTGTATTCCTCTCACGAAAT+GGG 0.442417 tig0022499:+22852 None:intergenic
AAGAACTTGAGGGGAAAAGA+AGG 0.442866 tig0022499:-22086 Msa1401020:CDS
TTGCATCCTTCAGATTTCTC+CGG 0.443045 tig0022499:-21649 Msa1401020:CDS
TAAAGGAGTCTTGGCTTGGT+TGG 0.443688 tig0022499:+21786 None:intergenic
ATTGGATGAAATTGCCAAGT+TGG 0.444138 tig0022499:-21896 Msa1401020:CDS
CTCGCTGCCCACAAGGTCAC+TGG 0.444838 tig0022499:+21867 None:intergenic
GCCTAGGAAGTTCCCTTTGA+AGG 0.445432 tig0022499:+21203 None:intergenic
ATGCAAATTGCTGATGATAA+AGG 0.445681 tig0022499:-17458 Msa1401020:CDS
TTGAAAGTAGCCTCGATTTG+TGG 0.446119 tig0022499:+18226 None:intergenic
AATTGATTTGTCAGTAGAAA+GGG 0.446328 tig0022499:+23043 None:intergenic
AGAACCATTGCTCCCATTGT+TGG 0.447103 tig0022499:-22570 Msa1401020:CDS
TCATCCTCATCCATATCAAC+AGG 0.447260 tig0022499:+22396 None:intergenic
AAAACTTTACAGAAGAGGTA+TGG 0.447318 tig0022499:-18079 Msa1401020:CDS
AGCCAACCGAGCACGTGCTT+CGG 0.447500 tig0022499:+22359 None:intergenic
AGAGAATGATACCTGCGGTT+TGG 0.450127 tig0022499:+22962 None:intergenic
AGAGATGCCAGAGGAGGCCT+AGG 0.450878 tig0022499:+21187 None:intergenic
ACGATATATTATAGATAGCT+AGG 0.451141 tig0022499:+23489 None:intergenic
TCCTGATAATCTTCTATGAC+AGG 0.451422 tig0022499:+20959 None:intergenic
AAGAGAGAACTGAAGGCTGC+TGG 0.453605 tig0022499:-22255 Msa1401020:CDS
AGGCAGCTAGGGTTCTGATA+TGG 0.454391 tig0022499:+23015 None:intergenic
AGCTGATGAAATTAATGTGC+AGG 0.454461 tig0022499:-17831 Msa1401020:CDS
AGGAGTTCTTAAAGGAGTCT+TGG 0.456240 tig0022499:+21777 None:intergenic
TGCAGATTTGCGAACGAGTA+GGG 0.456491 tig0022499:+22710 None:intergenic
AGATAGACCATAGGCGTTAC+GGG 0.456530 tig0022499:+20062 None:intergenic
TCATACCACTTCTGGGAGTA+AGG 0.456938 tig0022499:+21551 None:intergenic
GGAGATGAGGCAAATTAGGT+TGG 0.457194 tig0022499:-17437 Msa1401020:exon
GAATTGATTTGTCAGTAGAA+AGG 0.457927 tig0022499:+23042 None:intergenic
AATAGCCACCATGCAAGATC+AGG 0.459490 tig0022499:-17765 Msa1401020:CDS
ATGAGGAGGGTCCAGATGTT+GGG 0.461664 tig0022499:-17544 Msa1401020:CDS
AGAGGTACAAGCACAACAAA+AGG 0.463961 tig0022499:-17954 Msa1401020:CDS
ATAGCATCTCCTTTACTAGT+TGG 0.464658 tig0022499:+21745 None:intergenic
TCTTCTATGACAGGGATAGT+AGG 0.466162 tig0022499:+20968 None:intergenic
GTCAGGACCATTCAACAATC+AGG 0.466466 tig0022499:+17079 None:intergenic
AGAGATTGATACCTGCGGTT+TGG 0.467365 tig0022499:+23409 None:intergenic
TATTTGCTGGTCAGCTGAGA+GGG 0.467561 tig0022499:+17784 None:intergenic
TGCAAAGCTCGTCATGTCAA+TGG 0.468139 tig0022499:+17110 None:intergenic
CAGAAATTCCGTTTGAGAAG+AGG 0.469889 tig0022499:-22182 Msa1401020:CDS
GAGTCTCAGACACCACTGTT+AGG 0.471291 tig0022499:-21688 Msa1401020:CDS
CTGAAAATTTGGCCAGGCTG+AGG 0.471566 tig0022499:-21711 Msa1401020:CDS
TTGATATAAGGCAGCGGAGG+AGG 0.474103 tig0022499:-22230 Msa1401020:CDS
AATGAGGAGGGTCCAGATGT+TGG 0.477509 tig0022499:-17545 Msa1401020:CDS
TTCCGAAGCACGTGCTCGGT+TGG 0.478007 tig0022499:-22361 Msa1401020:CDS
TACTTGTACATCACCGAGTA+CGG 0.478328 tig0022499:-23072 Msa1401020:five_prime_UTR
TGATGTTGCTGATGAGGATA+GGG 0.479449 tig0022499:-22142 Msa1401020:CDS
AATTTCATCCAATTCTTGAT+CGG 0.479560 tig0022499:+21906 None:intergenic
GGAACTTCCTAGGCCTCCTC+TGG 0.482790 tig0022499:-21194 Msa1401020:CDS
CCAGTATCTTCGTGAGGCAA+TGG 0.484875 tig0022499:-20160 Msa1401020:CDS
TGTCTGAGACTCCCTCAGCC+TGG 0.484905 tig0022499:+21699 None:intergenic
ACTACACACGCAAGGGTATG+AGG 0.488149 tig0022499:-19920 Msa1401020:intron
TTTGAATGCTCATCCTCGGC+AGG 0.488824 tig0022499:+17653 None:intergenic
TCCTTCAAAGGGAACTTCCT+AGG 0.489332 tig0022499:-21204 Msa1401020:CDS
TGACCCTAGGAAATTGCGTC+CGG 0.489894 tig0022499:-22463 Msa1401020:CDS
TTGGCATGCAGAATAGCAGC+TGG 0.489948 tig0022499:+21994 None:intergenic
GAGTAAGGCCTGCACTTCCA+GGG 0.490905 tig0022499:+21566 None:intergenic
ATACCTGCGGTTTGGTGACA+GGG 0.491281 tig0022499:+23417 None:intergenic
GCAAATAAGGAGAAGAAGAA+AGG 0.491928 tig0022499:-21013 Msa1401020:CDS
TTTGATACCCGTAACGCCTA+TGG 0.492907 tig0022499:-20069 Msa1401020:CDS
CTCCTTTCTTATCATCTCGT+CGG 0.493278 tig0022499:+21087 None:intergenic
TGCTTTCCGAAGCACGTGCT+CGG 0.495069 tig0022499:-22365 Msa1401020:CDS
AATCTGAAGGATGCAACTCC+GGG 0.495306 tig0022499:+21656 None:intergenic
ACGAGTAGCACTGCTGCCTT+CGG 0.495690 tig0022499:+21837 None:intergenic
TGGGGATCTTATGGCAGAGC+TGG 0.496603 tig0022499:-18059 Msa1401020:CDS
GGAAAGTCTATATAGGGGTC+AGG 0.497310 tig0022499:+17062 None:intergenic
TGCAATTCATTCGGATATCT+GGG 0.499115 tig0022499:+17348 None:intergenic
GTCTCCGTCAGCTCTTATCA+AGG 0.499862 tig0022499:+21147 None:intergenic
GTCTGAAGTTCAGAAGCAAA+AGG 0.500731 tig0022499:-18110 Msa1401020:CDS
AAATCTGAAGGATGCAACTC+CGG 0.500871 tig0022499:+21655 None:intergenic
AACGATCAAAAGTCCTTCAA+AGG 0.501321 tig0022499:-21216 Msa1401020:CDS
GTGAGAAGTAAGCTGGATGA+TGG 0.502979 tig0022499:-19985 Msa1401020:CDS
AAGTAAGCTGGATGATGGGA+AGG 0.506469 tig0022499:-19980 Msa1401020:CDS
AATCATGTACTTGAGAGTAC+TGG 0.506925 tig0022499:-17860 Msa1401020:CDS
AGAGGATATGTCTGATAGAA+TGG 0.507303 tig0022499:-21287 Msa1401020:CDS
ATGTGAGAGGCAAGGCAGCT+AGG 0.509224 tig0022499:+23003 None:intergenic
TCCCTGAGAGGAGTTCCCTT+CGG 0.510495 tig0022499:+21493 None:intergenic
GATGATTCGACTTGAGAAGA+AGG 0.511403 tig0022499:-19947 Msa1401020:CDS
TGATAGAATGGCTAGAGAAA+AGG 0.511992 tig0022499:-21275 Msa1401020:CDS
AAACTTTACAGAAGAGGTAT+GGG 0.512703 tig0022499:-18078 Msa1401020:CDS
TTGAGAAAACTTTACAGAAG+AGG 0.513395 tig0022499:-18084 Msa1401020:CDS
AAATGTAATGGAGCACTTCA+GGG 0.514138 tig0022499:-18026 Msa1401020:CDS
CGAGGCTACTTTCAAGCAGA+TGG 0.514181 tig0022499:-18218 Msa1401020:CDS
CGAATGAATTGCATGGAAAG+TGG 0.515406 tig0022499:-17338 Msa1401020:three_prime_UTR
AAAGTAACAAGGGCAAAACT+TGG 0.516309 tig0022499:+17264 None:intergenic
CGAAGGAGTACGACCAACAA+TGG 0.518743 tig0022499:+22557 None:intergenic
CATTGCCTCACGAAGATACT+GGG 0.519621 tig0022499:+20161 None:intergenic
TGGGTGTCTGTGGATAATTA+GGG 0.519886 tig0022499:+21806 None:intergenic
GGAAAGGACACAAAATGTAA+TGG 0.520353 tig0022499:-18038 Msa1401020:CDS
CAGAGAACACCAACTAGTAA+AGG 0.520398 tig0022499:-21754 Msa1401020:CDS
ATCTTATGGCAGAGCTGGAA+AGG 0.522445 tig0022499:-18054 Msa1401020:CDS
AGAGAGAACTGAAGGCTGCT+GGG 0.523302 tig0022499:-22254 Msa1401020:CDS
TATTGAATGATCATAAGTAA+AGG 0.524234 tig0022499:-17306 Msa1401020:three_prime_UTR
TCATCCATATCAACAGGATC+AGG 0.524361 tig0022499:+22402 None:intergenic
TTGATGTTGCTGATGAGGAT+AGG 0.524642 tig0022499:-22143 Msa1401020:CDS
TCGGCTTGCTCAATAGGGGT+TGG 0.524733 tig0022499:+21106 None:intergenic
TGAAAATTTGGCCAGGCTGA+GGG 0.525084 tig0022499:-21710 Msa1401020:CDS
AGCATTGTCGTGCTCCAGTA+AGG 0.526571 tig0022499:+21057 None:intergenic
CTGACTCCTTCTGCAACCCC+TGG 0.529271 tig0022499:-21583 Msa1401020:CDS
TGAGAATGTGAGAAGTAAGC+TGG 0.529343 tig0022499:-19992 Msa1401020:CDS
GCTTGCTCAATAGGGGTTGG+TGG 0.531592 tig0022499:+21109 None:intergenic
CACTCAGTCTTCTTAATGGA+AGG 0.532258 tig0022499:+22651 None:intergenic
CTCCAAAATTGACATGGATG+TGG 0.533640 tig0022499:-17732 Msa1401020:CDS
GCTGGATGATGGGAAGGAGA+AGG 0.534854 tig0022499:-19974 Msa1401020:CDS
CACATTAATTTCATCAGCTG+TGG 0.535052 tig0022499:+17835 None:intergenic
GGAGGAGGCCTCTTCTCAAA+CGG 0.537221 tig0022499:+22174 None:intergenic
GAGTTATGCTATTATCAGGT+TGG 0.537533 tig0022499:+17492 None:intergenic
TTGGCTTGGTTGGGTGTCTG+TGG 0.541672 tig0022499:+21796 None:intergenic
GACCCTAGGAAATTGCGTCC+GGG 0.542095 tig0022499:-22462 Msa1401020:CDS
GATCCAAACGAGCAGCAAAT+GGG 0.542547 tig0022499:-20991 Msa1401020:CDS
CAAGTTCTTCAATAGTAGTA+GGG 0.542935 tig0022499:+22100 None:intergenic
CGCCCCTGTCACCAAACCGC+AGG 0.544786 tig0022499:-23420 Msa1401020:intron
TACTTTCAAGCAGATGGACG+TGG 0.549111 tig0022499:-18212 Msa1401020:CDS
TACTACTATTGAAGAACTTG+AGG 0.549669 tig0022499:-22097 Msa1401020:CDS
ACTACTATTGAAGAACTTGA+GGG 0.551426 tig0022499:-22096 Msa1401020:CDS
AGCCGACGAGATGATAAGAA+AGG 0.552168 tig0022499:-21089 Msa1401020:CDS
GAAAAGAAGGATTGATGTTG+AGG 0.552508 tig0022499:-22073 Msa1401020:CDS
CCTTAACACAAGCGGTGTCA+AGG 0.552579 tig0022499:+22508 None:intergenic
CTATTTGCTGGTCAGCTGAG+AGG 0.553022 tig0022499:+17783 None:intergenic
TGATCGGAAATCTGAGGCGG+TGG 0.554468 tig0022499:+21922 None:intergenic
GGTTATGCCAGTGACCTTGT+GGG 0.556103 tig0022499:-21874 Msa1401020:CDS
TGAGAAAGCAAGACGTTGCA+AGG 0.556741 tig0022499:-22044 Msa1401020:CDS
GCAGTAACCCATTTCGTGAG+AGG 0.559796 tig0022499:-22859 Msa1401020:intron
GGGTTATGCCAGTGACCTTG+TGG 0.560009 tig0022499:-21875 Msa1401020:CDS
ACTTGTACATCACCGAGTAC+GGG 0.560137 tig0022499:-23071 Msa1401020:five_prime_UTR
TTGCAGATTTGCGAACGAGT+AGG 0.561949 tig0022499:+22709 None:intergenic
GCACTTCCAGGGGTTGCAGA+AGG 0.564971 tig0022499:+21577 None:intergenic
AAGTGGTATGACGCCGGCAA+GGG 0.565169 tig0022499:-21539 Msa1401020:CDS
ACGATCAAAAGTCCTTCAAA+GGG 0.567785 tig0022499:-21215 Msa1401020:CDS
TTACTAGTTGGTGTTCTCTG+AGG 0.567840 tig0022499:+21757 None:intergenic
CAAAACAGTGTAAAGCTCGT+TGG 0.569337 tig0022499:-22689 Msa1401020:CDS
CAAGAATCATGCAATAGAAG+AGG 0.569707 tig0022499:-17918 Msa1401020:CDS
GGTATGACGCCGGCAAGGGA+TGG 0.571829 tig0022499:-21535 Msa1401020:CDS
TAAAGGAGATGCTATCATGA+TGG 0.573963 tig0022499:-21737 Msa1401020:CDS
TGATACCTGCGGTTTGGAGA+CGG 0.575500 tig0022499:+22968 None:intergenic
AGGCCTTTGGCCACAAATCG+AGG 0.575936 tig0022499:-18236 Msa1401020:CDS
TGAGTTCCTCGCTGCCCACA+AGG 0.576016 tig0022499:+21860 None:intergenic
ACCCTAGGAAATTGCGTCCG+GGG 0.576243 tig0022499:-22461 Msa1401020:CDS
AGTAGATATGAGTGCTGCGG+TGG 0.576531 tig0022499:-17588 Msa1401020:CDS
GAAGGAGTACGACCAACAAT+GGG 0.576764 tig0022499:+22558 None:intergenic
AGATATCCGAATGAATTGCA+TGG 0.579275 tig0022499:-17345 Msa1401020:three_prime_UTR
TAGAGAAAAGGCAGAAGAAG+AGG 0.579560 tig0022499:-21263 Msa1401020:CDS
TGCTGATGATAAAGGAGATG+AGG 0.579915 tig0022499:-17450 Msa1401020:CDS
ATGAACCTGGTGATGACCCT+AGG 0.580871 tig0022499:-22476 Msa1401020:CDS
TCCGAAGGGAACTCCTCTCA+GGG 0.580985 tig0022499:-21494 Msa1401020:CDS
ACATCAAAATAACCCGGAGG+AGG 0.581361 tig0022499:+22159 None:intergenic
TTGCAGAAGGAGTCAGCAGT+GGG 0.581838 tig0022499:+21590 None:intergenic
TTATTTGCTATCTCCTCAAG+CGG 0.583374 tig0022499:+21028 None:intergenic
CAAGAATCGTGCAATAGAAG+AGG 0.584671 tig0022499:-17972 Msa1401020:CDS
GTCACTGGCATAACCCAACT+TGG 0.585958 tig0022499:+21882 None:intergenic
AGTAAGGCCTGCACTTCCAG+GGG 0.586407 tig0022499:+21567 None:intergenic
TGATATGGATGAGGATGAGA+AGG 0.587713 tig0022499:-22391 Msa1401020:CDS
AACTCCTTGATAAGAGCTGA+CGG 0.589304 tig0022499:-21151 Msa1401020:CDS
CCTGATAATCTTCTATGACA+GGG 0.589597 tig0022499:+20960 None:intergenic
GCCAGATGCACCTCCTGCCG+AGG 0.589853 tig0022499:-17666 Msa1401020:CDS
GAATGCTCATCCTCGGCAGG+AGG 0.590279 tig0022499:+17656 None:intergenic
CACCACCGTCTCCAAACCGC+AGG 0.590467 tig0022499:-22973 Msa1401020:intron
GTAAAGCTCGTTGGTATGAG+TGG 0.590546 tig0022499:-22680 Msa1401020:CDS
ATAGTGCTAAGCTCGAGCTA+CGG 0.590781 tig0022499:-21435 Msa1401020:CDS
GACTGAGTGGACTCGAGAAG+AGG 0.592125 tig0022499:-22637 Msa1401020:CDS
TTTGAGAAGAGGCCTCCTCC+GGG 0.592447 tig0022499:-22171 Msa1401020:CDS
TGGCATGCAGAATAGCAGCT+GGG 0.592750 tig0022499:+21995 None:intergenic
GAAGTGGTATGACGCCGGCA+AGG 0.595106 tig0022499:-21540 Msa1401020:CDS
TGCTGATGAGGATAGGGAGG+TGG 0.595277 tig0022499:-22136 Msa1401020:CDS
AGCTCCAGAGATGCCAGAGG+AGG 0.595601 tig0022499:+21181 None:intergenic
GCACAAATGACAGACAGTAT+TGG 0.597076 tig0022499:-17698 Msa1401020:CDS
TGAGAAGTAAGCTGGATGAT+GGG 0.598085 tig0022499:-19984 Msa1401020:CDS
TGCTTCAACAAATTCCTCGA+GGG 0.598975 tig0022499:+20122 None:intergenic
AAAAGGCAGAAGAAGAGGCA+CGG 0.599691 tig0022499:-21258 Msa1401020:CDS
ATCCACTCCGAAAAGTAACA+AGG 0.599751 tig0022499:+17253 None:intergenic
GAATGAATTGCATGGAAAGT+GGG 0.599760 tig0022499:-17337 Msa1401020:three_prime_UTR
AAGTATGCCTGATTGTTGAA+TGG 0.600039 tig0022499:-17086 Msa1401020:three_prime_UTR
TTCTAGCTCCAAAATTGACA+TGG 0.602840 tig0022499:-17738 Msa1401020:CDS
CAGGGTACAAGCACAACAGA+AGG 0.603685 tig0022499:-18008 Msa1401020:CDS
AAGTAATGAGGGAAATGAGG+AGG 0.605491 tig0022499:-17558 Msa1401020:CDS
GAAAGGGGTAGTCCCGTACT+CGG 0.605548 tig0022499:+23059 None:intergenic
GCAATGGTTCTCCACTGAGT+AGG 0.605858 tig0022499:+22582 None:intergenic
CAGCTAGGGTTCTGATATGG+TGG 0.606007 tig0022499:+23018 None:intergenic
TCAACAGGATCAGGTCGCGC+AGG 0.606256 tig0022499:+22411 None:intergenic
AGAAGTAGCCTGATCTTGCA+TGG 0.607323 tig0022499:+17757 None:intergenic
TGGAAGCTGAAAATTTGGCC+AGG 0.607474 tig0022499:-21717 Msa1401020:CDS
ATTTGCTGGTCAGCTGAGAG+GGG 0.608256 tig0022499:+17785 None:intergenic
CGATATATTATAGATAGCTA+GGG 0.608443 tig0022499:+23490 None:intergenic
ATTGATTTGTCAGTAGAAAG+GGG 0.608444 tig0022499:+23044 None:intergenic
TCTCAGACACCACTGTTAGG+AGG 0.609284 tig0022499:-21685 Msa1401020:CDS
GCTCGGTTGGCTAACACGAA+AGG 0.609461 tig0022499:-22348 Msa1401020:CDS
AGCGGAGGAGGAAAAGGAGA+GGG 0.609580 tig0022499:-22218 Msa1401020:CDS
AGAAACAGCTTGAGGAAGCG+AGG 0.613924 tig0022499:-22299 Msa1401020:CDS
GTTGCAGAAGGAGTCAGCAG+TGG 0.614178 tig0022499:+21589 None:intergenic
ATGAGGATTATGATAAAGGG+AGG 0.615783 tig0022499:-22813 Msa1401020:CDS
ATCTAGTGTTGCTGGAAACG+CGG 0.615965 tig0022499:-20043 Msa1401020:CDS
GTGACCCCGGAGAAATCTGA+AGG 0.618504 tig0022499:+21643 None:intergenic
CCCTAGGAAATTGCGTCCGG+GGG 0.618511 tig0022499:-22460 Msa1401020:CDS
TGATCCTGTTGATATGGATG+AGG 0.618540 tig0022499:-22400 Msa1401020:CDS
TAGCCTCGATTTGTGGCCAA+AGG 0.618948 tig0022499:+18233 None:intergenic
CAATGCTAAGTATCCGCTTG+AGG 0.619069 tig0022499:-21041 Msa1401020:CDS
AATTTCCTAGGGTCATCACC+AGG 0.619740 tig0022499:+22471 None:intergenic
CAGCGGAGGAGGAAAAGGAG+AGG 0.619802 tig0022499:-22219 Msa1401020:CDS
CTGGGATTGATATAAGGCAG+CGG 0.621106 tig0022499:-22236 Msa1401020:CDS
ATCTGAAGACGACGATGCGG+CGG 0.621185 tig0022499:+23447 None:intergenic
GCAATTTGCATGTCATCAAG+CGG 0.622806 tig0022499:+17470 None:intergenic
GCAGGCCTTACTCCCAGAAG+TGG 0.624004 tig0022499:-21556 Msa1401020:CDS
AAGGTTACACTACACACGCA+AGG 0.626441 tig0022499:-19928 Msa1401020:CDS
AGCAGTCAGCAGCATCACAT+AGG 0.626773 tig0022499:-18147 Msa1401020:CDS
ACGACCAACAATGGGAGCAA+TGG 0.628407 tig0022499:+22566 None:intergenic
AGAAGATGCTGAAGAGCCTG+AGG 0.629986 tig0022499:-21320 Msa1401020:CDS
GGATTCGGATCAATCTCCCC+CGG 0.632404 tig0022499:+22444 None:intergenic
CTCGTCGGCTTGCTCAATAG+GGG 0.633774 tig0022499:+21102 None:intergenic
AACAGCTTGAGGAAGCGAGG+AGG 0.635219 tig0022499:-22296 Msa1401020:CDS
GTTATCATCCTTAACACAAG+CGG 0.635250 tig0022499:+22500 None:intergenic
GCTGATGAAATTAATGTGCA+GGG 0.635673 tig0022499:-17830 Msa1401020:CDS
GGCATGCAGAATAGCAGCTG+GGG 0.637586 tig0022499:+21996 None:intergenic
GCCTGAGGAGAAGATTGAAG+AGG 0.638365 tig0022499:-21305 Msa1401020:CDS
GGCAGCGAGGAACTCACCGA+AGG 0.640181 tig0022499:-21853 Msa1401020:CDS
AGGTTACACTACACACGCAA+GGG 0.642059 tig0022499:-19927 Msa1401020:CDS
TCCCAGAAGTGGTATGACGC+CGG 0.645263 tig0022499:-21545 Msa1401020:CDS
TGTTGCTGATGAGGATAGGG+AGG 0.645550 tig0022499:-22139 Msa1401020:CDS
AGTAATGAGGGAAATGAGGA+GGG 0.645816 tig0022499:-17557 Msa1401020:CDS
CTACTATTGAAGAACTTGAG+GGG 0.649822 tig0022499:-22095 Msa1401020:CDS
TACCTGCGGTTTGGTGACAG+GGG 0.650677 tig0022499:+23418 None:intergenic
TCAATAGTAGTAGGGAACGC+AGG 0.663373 tig0022499:+22108 None:intergenic
ATTATGGAAAGTCTATATAG+GGG 0.664551 tig0022499:+17057 None:intergenic
AGCTAGGGAGAAACAGCTTG+AGG 0.665565 tig0022499:-22307 Msa1401020:CDS
AATTCTTGATCGGAAATCTG+AGG 0.665716 tig0022499:+21916 None:intergenic
GGGTACAGCAAATAGTGAAG+CGG 0.667143 tig0022499:-17810 Msa1401020:CDS
AAGGATGATAACTATGAACC+TGG 0.668836 tig0022499:-22489 Msa1401020:CDS
TAGCGTTCAAGACACTGCGA+AGG 0.670461 tig0022499:+22540 None:intergenic
CACAGTAGATATGAGTGCTG+CGG 0.672475 tig0022499:-17591 Msa1401020:CDS
CGCAGCACTCATATCTACTG+TGG 0.672664 tig0022499:+17592 None:intergenic
TCCACTCCGAAAAGTAACAA+GGG 0.677765 tig0022499:+17254 None:intergenic
TCAGCAACATCAAAATAACC+CGG 0.679101 tig0022499:+22153 None:intergenic
CTTCCATTAAGAAGACTGAG+TGG 0.680364 tig0022499:-22650 Msa1401020:CDS
CAGTGACCTTGTGGGCAGCG+AGG 0.681072 tig0022499:-21866 Msa1401020:CDS
AACTTTACAGAAGAGGTATG+GGG 0.684227 tig0022499:-18077 Msa1401020:CDS
ACTGTTAGGAGGAGAAAACC+CGG 0.686147 tig0022499:-21674 Msa1401020:CDS
CAGATCTGAAGACGACGATG+CGG 0.686816 tig0022499:+23444 None:intergenic
TGAAGCCCAGTATCTTCGTG+AGG 0.688109 tig0022499:-20166 Msa1401020:CDS
ATATGTAGCTCATCCCTGAG+AGG 0.688581 tig0022499:+21481 None:intergenic
CTAAGCTTATGCCTACTCAG+TGG 0.690760 tig0022499:-22593 Msa1401020:CDS
AGTATCTTCGTGAGGCAATG+GGG 0.691770 tig0022499:-20158 Msa1401020:CDS
GAATGAGAATGTGAGAGGCA+AGG 0.693449 tig0022499:+22995 None:intergenic
GTGCTTCAACAAATTCCTCG+AGG 0.695034 tig0022499:+20121 None:intergenic
TCTTGATCGGAAATCTGAGG+CGG 0.695426 tig0022499:+21919 None:intergenic
AGCAACACTAGATAGACCAT+AGG 0.697000 tig0022499:+20053 None:intergenic
GGATTGATATAAGGCAGCGG+AGG 0.699913 tig0022499:-22233 Msa1401020:CDS
ATAAGCTCCAGAGATGCCAG+AGG 0.701530 tig0022499:+21178 None:intergenic
GTGGTGAATGAGAATGTGAG+AGG 0.709126 tig0022499:+22990 None:intergenic
TAATTGGTTTGGTTTCACGG+TGG 0.725259 tig0022499:+23519 None:intergenic
AGTAGCCTGATCTTGCATGG+TGG 0.726412 tig0022499:+17760 None:intergenic
TGTCATAGAAGATTATCAGG+AGG 0.727087 tig0022499:-20957 Msa1401020:CDS
GCATGAAAATGATTCCCTCG+AGG 0.731393 tig0022499:-20136 Msa1401020:CDS
CAAGGAATAAAATTGCAGAG+AGG 0.745082 tig0022499:-22026 Msa1401020:CDS
TACCTGCGGTTTGGAGACGG+TGG 0.754118 tig0022499:+22971 None:intergenic
GCATCCTTCAGATTTCTCCG+GGG 0.756401 tig0022499:-21647 Msa1401020:CDS
GCAACATCAAAATAACCCGG+AGG 0.761555 tig0022499:+22156 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAGTTAACATAATATATT+AGG - tig0022499:20973-20992 Msa1401020:CDS 10.0%
!!! GTACTTTTTTTTTTTTTTTA+AGG - tig0022499:22099-22118 Msa1401020:CDS 10.0%
!!! ACAAAGTACTAATAATTTAA+AGG + tig0022499:19794-19813 None:intergenic 15.0%
!! AAAGAAAGAAAAAAAAAACA+AGG + tig0022499:19994-20013 None:intergenic 15.0%
!! TTATAATCATCTGATTAATT+AGG - tig0022499:20019-20038 Msa1401020:CDS 15.0%
!! TTTCTTTCAATTATTGTTAT+TGG - tig0022499:20714-20733 Msa1401020:intron 15.0%
!!! AACATTTTATGCTAATTTTT+GGG + tig0022499:21813-21832 None:intergenic 15.0%
!!! TAACATTTTATGCTAATTTT+TGG + tig0022499:21814-21833 None:intergenic 15.0%
!!! CTTTTTTTTTTTTTTTAAGG+AGG - tig0022499:22102-22121 Msa1401020:CDS 15.0%
!!! TTGTTTGATAATTTCAGATT+GGG - tig0022499:17348-17367 Msa1401020:three_prime_UTR 20.0%
!! AAAAATGAGGATTATGATAA+AGG - tig0022499:17742-17761 Msa1401020:CDS 20.0%
!! AAAATGAGGATTATGATAAA+GGG - tig0022499:17743-17762 Msa1401020:CDS 20.0%
!! CATAAAACAAAATTAAAGGT+GGG + tig0022499:19655-19674 None:intergenic 20.0%
!! AAGGCATAAAACAAAATTAA+AGG + tig0022499:19659-19678 None:intergenic 20.0%
!! TTGCTGAATTAACATAAATA+GGG + tig0022499:20204-20223 None:intergenic 20.0%
!! ATTGCTGAATTAACATAAAT+AGG + tig0022499:20205-20224 None:intergenic 20.0%
!! GGATTCAAATAATAATTAAC+AGG + tig0022499:20254-20273 None:intergenic 20.0%
!! TTATACCATAGTCAAATTTA+AGG + tig0022499:20275-20294 None:intergenic 20.0%
!! AAATTTGACTATGGTATAAT+TGG - tig0022499:20276-20295 Msa1401020:intron 20.0%
!! AACAATAATTGAAAGAAACA+CGG + tig0022499:20712-20731 None:intergenic 20.0%
!! AAATTACACAATAATATGTC+CGG - tig0022499:21259-21278 Msa1401020:CDS 20.0%
!!! ACATTTTATGCTAATTTTTG+GGG + tig0022499:21812-21831 None:intergenic 20.0%
!! GTAAATCTAATTTGATCATA+TGG + tig0022499:21848-21867 None:intergenic 20.0%
!!! TGTTTTCTTTCTTGATTATA+TGG - tig0022499:22153-22172 Msa1401020:CDS 20.0%
!!! GTTTTCTTTCTTGATTATAT+GGG - tig0022499:22154-22173 Msa1401020:CDS 20.0%
!! TATTGAATGATCATAAGTAA+AGG - tig0022499:23253-23272 Msa1401020:intron 20.0%
!!! TATTTTGGATTCACTTAATT+AGG - tig0022499:23342-23361 Msa1401020:intron 20.0%
!! TATTATGGAAAGTCTATATA+GGG + tig0022499:23506-23525 None:intergenic 20.0%
!! ATATTATGGAAAGTCTATAT+AGG + tig0022499:23507-23526 None:intergenic 20.0%
! CGATATATTATAGATAGCTA+GGG + tig0022499:17072-17091 None:intergenic 25.0%
! ACGATATATTATAGATAGCT+AGG + tig0022499:17073-17092 None:intergenic 25.0%
! AATTCCAAAAATCAACTTCT+GGG + tig0022499:17314-17333 None:intergenic 25.0%
! AAATTCCAAAAATCAACTTC+TGG + tig0022499:17315-17334 None:intergenic 25.0%
!! GTTGTTTGATAATTTCAGAT+TGG - tig0022499:17347-17366 Msa1401020:three_prime_UTR 25.0%
!! TGTTTGATAATTTCAGATTG+GGG - tig0022499:17349-17368 Msa1401020:three_prime_UTR 25.0%
!!! AATTGATTTGTCAGTAGAAA+GGG + tig0022499:17519-17538 None:intergenic 25.0%
!!! AATAAAGTGTTGCAAAAATG+AGG - tig0022499:17729-17748 Msa1401020:CDS 25.0%
! TGAAATATGGTAAAAATCAG+TGG - tig0022499:17813-17832 Msa1401020:CDS 25.0%
! GAAATATGGTAAAAATCAGT+GGG - tig0022499:17814-17833 Msa1401020:CDS 25.0%
! AATTTCATCCAATTCTTGAT+CGG + tig0022499:18656-18675 None:intergenic 25.0%
! GCATAAAACAAAATTAAAGG+TGG + tig0022499:19656-19675 None:intergenic 25.0%
! ATGAAGAAAAGTGAAGTAAA+AGG + tig0022499:19678-19697 None:intergenic 25.0%
! ATTATTACATAAGATTCCAG+TGG + tig0022499:19875-19894 None:intergenic 25.0%
! AATATGCAACTAGTTCATAA+AGG + tig0022499:19942-19961 None:intergenic 25.0%
! TGAATTCACAAAAGAAGAAA+TGG + tig0022499:20081-20100 None:intergenic 25.0%
! ATAATAATTAACAGGCAGTT+TGG + tig0022499:20246-20265 None:intergenic 25.0%
! TGAATCCTTAAATTTGACTA+TGG - tig0022499:20267-20286 Msa1401020:intron 25.0%
! TTATATCTGTTGTTCTCAAT+AGG - tig0022499:20351-20370 Msa1401020:intron 25.0%
! TCATAAAAGAAAATGAAAGC+AGG + tig0022499:20782-20801 None:intergenic 25.0%
! ATTACAAAACCAACTTTGAA+GGG + tig0022499:20861-20880 None:intergenic 25.0%
! TATTACAAAACCAACTTTGA+AGG + tig0022499:20862-20881 None:intergenic 25.0%
!!! AATTGCAACAGTTTTAAGTT+AGG + tig0022499:20899-20918 None:intergenic 25.0%
!! ATCCAATAGCTTAAGTTTTA+AGG - tig0022499:21038-21057 Msa1401020:CDS 25.0%
! ATCCTTAAAACTTAAGCTAT+TGG + tig0022499:21043-21062 None:intergenic 25.0%
!!! AATAGCTTAAGTTTTAAGGA+TGG - tig0022499:21042-21061 Msa1401020:CDS 25.0%
!!! AAAATCAAGTCTGTTTTGTT+TGG + tig0022499:21285-21304 None:intergenic 25.0%
!!! CAGACTTGATTTTTTAATTG+AGG - tig0022499:21292-21311 Msa1401020:CDS 25.0%
!! TGATTGTATCTTTTCTAACT+CGG - tig0022499:21465-21484 Msa1401020:CDS 25.0%
! ATCCTCTCAATTGTTTATTA+AGG - tig0022499:21589-21608 Msa1401020:CDS 25.0%
! AAATAATATGAAGGGTTCAA+GGG + tig0022499:21708-21727 None:intergenic 25.0%
! TAAATAATATGAAGGGTTCA+AGG + tig0022499:21709-21728 None:intergenic 25.0%
!! TATTTTGTGAAATGTGTTGA+TGG - tig0022499:21929-21948 Msa1401020:CDS 25.0%
! TTAATATTCAGTCTCGATTA+CGG + tig0022499:22270-22289 None:intergenic 25.0%
! TTTCAGATGAGATCAAAAAA+AGG - tig0022499:22303-22322 Msa1401020:CDS 25.0%
!!! TTTTCAAGCTTTAAAAAAGC+AGG - tig0022499:22389-22408 Msa1401020:CDS 25.0%
! GTGGAAATAAAAAGTAATGA+GGG - tig0022499:22990-23009 Msa1401020:five_prime_UTR 25.0%
! AATGATCATAAGTAAAGGTT+TGG - tig0022499:23258-23277 Msa1401020:intron 25.0%
!! TCTTAAAACTCCTTTTAGAT+GGG - tig0022499:23383-23402 Msa1401020:intron 25.0%
!! GAATTTCGTAATGTACTTTT+TGG - tig0022499:23425-23444 Msa1401020:five_prime_UTR 25.0%
! ATTATGGAAAGTCTATATAG+GGG + tig0022499:23505-23524 None:intergenic 25.0%
! TGTCTATCATGAGAATATTA+TGG + tig0022499:23521-23540 None:intergenic 25.0%
!! TGATAATTGGTTTGGTTTCA+CGG + tig0022499:17046-17065 None:intergenic 30.0%
AAACAGCGAAATCAATGAAT+TGG + tig0022499:17225-17244 None:intergenic 30.0%
AACACACATGATCCAATTAA+GGG + tig0022499:17436-17455 None:intergenic 30.0%
TAACACACATGATCCAATTA+AGG + tig0022499:17437-17456 None:intergenic 30.0%
!! ATTGATTTGTCAGTAGAAAG+GGG + tig0022499:17518-17537 None:intergenic 30.0%
!! GAATTGATTTGTCAGTAGAA+AGG + tig0022499:17520-17539 None:intergenic 30.0%
AAAGCTGCTGTTATGAAATA+TGG - tig0022499:17800-17819 Msa1401020:CDS 30.0%
CGAAAGGTAAAAAAGCAAAA+AGG - tig0022499:18227-18246 Msa1401020:CDS 30.0%
AAAAAGCAAAAAGGAAAGCT+AGG - tig0022499:18236-18255 Msa1401020:CDS 30.0%
AAAAGCAAAAAGGAAAGCTA+GGG - tig0022499:18237-18256 Msa1401020:CDS 30.0%
!!! TTATTTTGATGTTGCTGATG+AGG - tig0022499:18411-18430 Msa1401020:intron 30.0%
CAAGTTCTTCAATAGTAGTA+GGG + tig0022499:18462-18481 None:intergenic 30.0%
TCAAGTTCTTCAATAGTAGT+AGG + tig0022499:18463-18482 None:intergenic 30.0%
TACTACTATTGAAGAACTTG+AGG - tig0022499:18462-18481 Msa1401020:intron 30.0%
ACTACTATTGAAGAACTTGA+GGG - tig0022499:18463-18482 Msa1401020:intron 30.0%
! ATCTCTTTCTAACTGTTTCT+GGG + tig0022499:18603-18622 None:intergenic 30.0%
! GTGTGAATTTCCTTTTTCTT+AGG + tig0022499:18943-18962 None:intergenic 30.0%
GCTACATATCAATGAAGATA+TGG - tig0022499:19092-19111 Msa1401020:intron 30.0%
!! ACTATCTGGTACTCATTTTT+AGG + tig0022499:19204-19223 None:intergenic 30.0%
TACTTTGTCCAGTTATTACT+TGG - tig0022499:19806-19825 Msa1401020:intron 30.0%
! TGATAATGCCAAGTAATAAC+TGG + tig0022499:19817-19836 None:intergenic 30.0%
TATGAACTAGTTGCATATTG+TGG - tig0022499:19943-19962 Msa1401020:CDS 30.0%
!! CTGATTAATTAGGTTGAAGT+TGG - tig0022499:20029-20048 Msa1401020:CDS 30.0%
! ACTTGTTACAAAAACGAAAG+TGG + tig0022499:20150-20169 None:intergenic 30.0%
TAATTTCTTTCGACCTTGTT+TGG - tig0022499:20921-20940 Msa1401020:intron 30.0%
TATCATCCATTATATGCCAT+GGG + tig0022499:20951-20970 None:intergenic 30.0%
GAAATAGTGTTGTCAAATAG+CGG - tig0022499:21102-21121 Msa1401020:CDS 30.0%
TGTGTTATACTGTACAACAA+TGG + tig0022499:21226-21245 None:intergenic 30.0%
!!! TTTTTTAATTGAGGTCGTAG+TGG - tig0022499:21301-21320 Msa1401020:CDS 30.0%
TAACTCCTCAAGTTAAGAAA+AGG - tig0022499:21391-21410 Msa1401020:CDS 30.0%
TTAATCTGCTTCACAAAAAC+TGG + tig0022499:21502-21521 None:intergenic 30.0%
! AGTTTTTGTGAAGCAGATTA+AGG - tig0022499:21501-21520 Msa1401020:CDS 30.0%
GACCTTAATAAACAATTGAG+AGG + tig0022499:21594-21613 None:intergenic 30.0%
! CATTTGTGTGTATTTGAGTT+GGG - tig0022499:21678-21697 Msa1401020:CDS 30.0%
!! ATTTGTGTGTATTTGAGTTG+GGG - tig0022499:21679-21698 Msa1401020:CDS 30.0%
AATAAGTAAAATTAGGCCTC+CGG - tig0022499:21773-21792 Msa1401020:CDS 30.0%
AGATTTACAATTTCTCACGA+TGG - tig0022499:21860-21879 Msa1401020:CDS 30.0%
GATTTACAATTTCTCACGAT+GGG - tig0022499:21861-21880 Msa1401020:CDS 30.0%
TGAACAAATCTTTCCTTTCT+CGG + tig0022499:22006-22025 None:intergenic 30.0%
!!! TTGCAGATTTTAAGATGAGA+GGG + tig0022499:22041-22060 None:intergenic 30.0%
! AATGAAGTTACCCTTTTCTA+TGG - tig0022499:22184-22203 Msa1401020:CDS 30.0%
! ATGAAGTTACCCTTTTCTAT+GGG - tig0022499:22185-22204 Msa1401020:CDS 30.0%
CGAGACTGAATATTAAACTT+TGG - tig0022499:22274-22293 Msa1401020:CDS 30.0%
ACTGAATATTAAACTTTGGC+TGG - tig0022499:22278-22297 Msa1401020:CDS 30.0%
CACATAGGATAAACAATCTT+TGG - tig0022499:22427-22446 Msa1401020:CDS 30.0%
TTGAGAAAACTTTACAGAAG+AGG - tig0022499:22475-22494 Msa1401020:CDS 30.0%
AAAACTTTACAGAAGAGGTA+TGG - tig0022499:22480-22499 Msa1401020:CDS 30.0%
! AAACTTTACAGAAGAGGTAT+GGG - tig0022499:22481-22500 Msa1401020:CDS 30.0%
GGTGGAAATAAAAAGTAATG+AGG - tig0022499:22989-23008 Msa1401020:five_prime_UTR 30.0%
AAAAAGTAATGAGGGAAATG+AGG - tig0022499:22998-23017 Msa1401020:five_prime_UTR 30.0%
ATGCAAATTGCTGATGATAA+AGG - tig0022499:23101-23120 Msa1401020:intron 30.0%
!!! CATCTAAAAGGAGTTTTAAG+AGG + tig0022499:23384-23403 None:intergenic 30.0%
! CTCTTAAAACTCCTTTTAGA+TGG - tig0022499:23382-23401 Msa1401020:intron 30.0%
! CTTAAAACTCCTTTTAGATG+GGG - tig0022499:23384-23403 Msa1401020:intron 30.0%
! TAGGGTTCTGATAATTGGTT+TGG + tig0022499:17054-17073 None:intergenic 35.0%
! ATAGCTAGGGTTCTGATAAT+TGG + tig0022499:17059-17078 None:intergenic 35.0%
CGAAATCAATGAATTGGAAG+AGG + tig0022499:17219-17238 None:intergenic 35.0%
!!! TTTTGTGTTTGTGTTGGTTG+CGG - tig0022499:17373-17392 Msa1401020:three_prime_UTR 35.0%
TTGTATTCCTCTCACGAAAT+GGG + tig0022499:17710-17729 None:intergenic 35.0%
TTTGTATTCCTCTCACGAAA+TGG + tig0022499:17711-17730 None:intergenic 35.0%
ATGAGGATTATGATAAAGGG+AGG - tig0022499:17746-17765 Msa1401020:CDS 35.0%
!! TTATGATAAAGGGAGGTGTT+TGG - tig0022499:17753-17772 Msa1401020:CDS 35.0%
ATTTCATAACAGCAGCTTTC+AGG + tig0022499:17799-17818 None:intergenic 35.0%
GTTATCATCCTTAACACAAG+CGG + tig0022499:18062-18081 None:intergenic 35.0%
AAGGATGATAACTATGAACC+TGG - tig0022499:18070-18089 Msa1401020:CDS 35.0%
ACAGAAAAAGAGAGAACTGA+AGG - tig0022499:18297-18316 Msa1401020:intron 35.0%
TCAGCAACATCAAAATAACC+CGG + tig0022499:18409-18428 None:intergenic 35.0%
CTACTATTGAAGAACTTGAG+GGG - tig0022499:18464-18483 Msa1401020:intron 35.0%
GAAAAGAAGGATTGATGTTG+AGG - tig0022499:18486-18505 Msa1401020:intron 35.0%
CAAGGAATAAAATTGCAGAG+AGG - tig0022499:18533-18552 Msa1401020:intron 35.0%
GATCTCTTTCTAACTGTTTC+TGG + tig0022499:18604-18623 None:intergenic 35.0%
AATTCTTGATCGGAAATCTG+AGG + tig0022499:18646-18665 None:intergenic 35.0%
TCAGATTTCCGATCAAGAAT+TGG - tig0022499:18645-18664 Msa1401020:intron 35.0%
ATTGGATGAAATTGCCAAGT+TGG - tig0022499:18663-18682 Msa1401020:intron 35.0%
TTGGATGAAATTGCCAAGTT+GGG - tig0022499:18664-18683 Msa1401020:intron 35.0%
ATAGCATCTCCTTTACTAGT+TGG + tig0022499:18817-18836 None:intergenic 35.0%
TAAAGGAGATGCTATCATGA+TGG - tig0022499:18822-18841 Msa1401020:intron 35.0%
! CATGATGGAAGCTGAAAATT+TGG - tig0022499:18837-18856 Msa1401020:intron 35.0%
TCTTCAGCATCTTCTTGAAT+TGG + tig0022499:19234-19253 None:intergenic 35.0%
AGAGGATATGTCTGATAGAA+TGG - tig0022499:19272-19291 Msa1401020:intron 35.0%
TGATAGAATGGCTAGAGAAA+AGG - tig0022499:19284-19303 Msa1401020:intron 35.0%
AACGATCAAAAGTCCTTCAA+AGG - tig0022499:19343-19362 Msa1401020:intron 35.0%
ACGATCAAAAGTCCTTCAAA+GGG - tig0022499:19344-19363 Msa1401020:intron 35.0%
!! TTATTTGCTATCTCCTCAAG+CGG + tig0022499:19534-19553 None:intergenic 35.0%
GCAAATAAGGAGAAGAAGAA+AGG - tig0022499:19546-19565 Msa1401020:intron 35.0%
CCTGATAATCTTCTATGACA+GGG + tig0022499:19602-19621 None:intergenic 35.0%
TCCTGATAATCTTCTATGAC+AGG + tig0022499:19603-19622 None:intergenic 35.0%
TGTCATAGAAGATTATCAGG+AGG - tig0022499:19602-19621 Msa1401020:intron 35.0%
AAAGCACATTGTGTACCAAA+GGG + tig0022499:19731-19750 None:intergenic 35.0%
! AAAAGCACATTGTGTACCAA+AGG + tig0022499:19732-19751 None:intergenic 35.0%
AAAGTGGAAGGTAGAATTTG+GGG + tig0022499:20134-20153 None:intergenic 35.0%
GAAAGTGGAAGGTAGAATTT+GGG + tig0022499:20135-20154 None:intergenic 35.0%
GTTACAAAAACGAAAGTGGA+AGG + tig0022499:20146-20165 None:intergenic 35.0%
TTTGTAGTTGTCAAGTTCCT+TGG - tig0022499:20742-20761 Msa1401020:intron 35.0%
CTATCATCCATTATATGCCA+TGG + tig0022499:20952-20971 None:intergenic 35.0%
!!! AGCTTAAGTTTTAAGGATGG+AGG - tig0022499:21045-21064 Msa1401020:CDS 35.0%
TTGTAGTGCTATAGCTTACA+TGG - tig0022499:21127-21146 Msa1401020:CDS 35.0%
TGCTATAGCTTACATGGATA+TGG - tig0022499:21133-21152 Msa1401020:CDS 35.0%
GCTATAGCTTACATGGATAT+GGG - tig0022499:21134-21153 Msa1401020:CDS 35.0%
TGTTGTACAGTATAACACAC+AGG - tig0022499:21227-21246 Msa1401020:CDS 35.0%
ACACTTATTGTATCGAGGAA+TGG - tig0022499:21423-21442 Msa1401020:CDS 35.0%
! TTTTGTGAAGCAGATTAAGG+TGG - tig0022499:21504-21523 Msa1401020:CDS 35.0%
GAAGGGGTCTTTATAATAGT+GGG - tig0022499:21563-21582 Msa1401020:CDS 35.0%
GCATTTGTGTGTATTTGAGT+TGG - tig0022499:21677-21696 Msa1401020:CDS 35.0%
TTGGGGAGAAATAAAAGTTC+CGG + tig0022499:21795-21814 None:intergenic 35.0%
AAATACACCCCTTTCTTTGT+AGG + tig0022499:21914-21933 None:intergenic 35.0%
!! TGATGGAGTATGAAAGTGTT+AGG - tig0022499:21946-21965 Msa1401020:CDS 35.0%
!! GATGGAGTATGAAAGTGTTA+GGG - tig0022499:21947-21966 Msa1401020:CDS 35.0%
!!! GTTGCAGATTTTAAGATGAG+AGG + tig0022499:22042-22061 None:intergenic 35.0%
TCTGCTAAACCCATAGAAAA+GGG + tig0022499:22197-22216 None:intergenic 35.0%
ATCTGCTAAACCCATAGAAA+AGG + tig0022499:22198-22217 None:intergenic 35.0%
TGAGATCAAAAAAAGGCCTT+TGG - tig0022499:22310-22329 Msa1401020:CDS 35.0%
! AACTTTACAGAAGAGGTATG+GGG - tig0022499:22482-22501 Msa1401020:CDS 35.0%
GGAAAGGACACAAAATGTAA+TGG - tig0022499:22521-22540 Msa1401020:CDS 35.0%
! AAAATGTAATGGAGCACTTC+AGG - tig0022499:22532-22551 Msa1401020:CDS 35.0%
! AAATGTAATGGAGCACTTCA+GGG - tig0022499:22533-22552 Msa1401020:CDS 35.0%
CTCTTCTATTGCATGATTCT+TGG + tig0022499:22643-22662 None:intergenic 35.0%
CAAGAATCATGCAATAGAAG+AGG - tig0022499:22641-22660 Msa1401020:CDS 35.0%
! AATCATGTACTTGAGAGTAC+TGG - tig0022499:22699-22718 Msa1401020:CDS 35.0%
CACATTAATTTCATCAGCTG+TGG + tig0022499:22727-22746 None:intergenic 35.0%
AGCTGATGAAATTAATGTGC+AGG - tig0022499:22728-22747 Msa1401020:CDS 35.0%
GCTGATGAAATTAATGTGCA+GGG - tig0022499:22729-22748 Msa1401020:CDS 35.0%
!! TTCTAGCTCCAAAATTGACA+TGG - tig0022499:22821-22840 Msa1401020:exon 35.0%
! ATCCACATCCATGTCAATTT+TGG + tig0022499:22832-22851 None:intergenic 35.0%
! AACTTTTGAATGCTCATCCT+CGG + tig0022499:22913-22932 None:intergenic 35.0%
GAGTTATGCTATTATCAGGT+TGG + tig0022499:23070-23089 None:intergenic 35.0%
TAAAGGAGATGAGGCAAATT+AGG - tig0022499:23118-23137 Msa1401020:intron 35.0%
TGCAATTCATTCGGATATCT+GGG + tig0022499:23214-23233 None:intergenic 35.0%
ATGCAATTCATTCGGATATC+TGG + tig0022499:23215-23234 None:intergenic 35.0%
AGATATCCGAATGAATTGCA+TGG - tig0022499:23214-23233 Msa1401020:intron 35.0%
CACTTTCCATGCAATTCATT+CGG + tig0022499:23223-23242 None:intergenic 35.0%
GAATGAATTGCATGGAAAGT+GGG - tig0022499:23222-23241 Msa1401020:intron 35.0%
AAAGTAACAAGGGCAAAACT+TGG + tig0022499:23298-23317 None:intergenic 35.0%
!!! GTTTTGCCCTTGTTACTTTT+CGG - tig0022499:23299-23318 Msa1401020:intron 35.0%
!!! ATGTTGGTGATGAGCTATTT+TGG - tig0022499:23327-23346 Msa1401020:intron 35.0%
!!! AAAGGAGTTTTAAGAGGACA+TGG + tig0022499:23378-23397 None:intergenic 35.0%
GATAGTTTACCCCATCTAAA+AGG + tig0022499:23396-23415 None:intergenic 35.0%
AAGTATGCCTGATTGTTGAA+TGG - tig0022499:23473-23492 Msa1401020:five_prime_UTR 35.0%
!! TAATTGGTTTGGTTTCACGG+TGG + tig0022499:17043-17062 None:intergenic 40.0%
AAGCAAGAGATTGATACCTG+CGG + tig0022499:17158-17177 None:intergenic 40.0%
! TGCACATTACGCGATTTTCT+AGG - tig0022499:17246-17265 Msa1401020:three_prime_UTR 40.0%
! GCACATTACGCGATTTTCTA+GGG - tig0022499:17247-17266 Msa1401020:three_prime_UTR 40.0%
CCAAAAATCAACTTCTGGGT+CGG + tig0022499:17310-17329 None:intergenic 40.0%
! TGGGGTTTTTGTGTTTGTGT+TGG - tig0022499:17367-17386 Msa1401020:three_prime_UTR 40.0%
GTTCCAAACCAACCCTTAAT+TGG - tig0022499:17421-17440 Msa1401020:three_prime_UTR 40.0%
!! GATCCAATTAAGGGTTGGTT+TGG + tig0022499:17427-17446 None:intergenic 40.0%
CACATGATCCAATTAAGGGT+TGG + tig0022499:17432-17451 None:intergenic 40.0%
TACTTGTACATCACCGAGTA+CGG - tig0022499:17487-17506 Msa1401020:CDS 40.0%
AGCTTTCAGGATTTCATCCT+CGG + tig0022499:17786-17805 None:intergenic 40.0%
CAAAACAGTGTAAAGCTCGT+TGG - tig0022499:17870-17889 Msa1401020:CDS 40.0%
CACTCAGTCTTCTTAATGGA+AGG + tig0022499:17911-17930 None:intergenic 40.0%
CTTCCATTAAGAAGACTGAG+TGG - tig0022499:17909-17928 Msa1401020:CDS 40.0%
AGTCCACTCAGTCTTCTTAA+TGG + tig0022499:17915-17934 None:intergenic 40.0%
TCATCCATATCAACAGGATC+AGG + tig0022499:18160-18179 None:intergenic 40.0%
TGATCCTGTTGATATGGATG+AGG - tig0022499:18159-18178 Msa1401020:CDS 40.0%
TCATCCTCATCCATATCAAC+AGG + tig0022499:18166-18185 None:intergenic 40.0%
TGATATGGATGAGGATGAGA+AGG - tig0022499:18168-18187 Msa1401020:CDS 40.0%
CAGAAATTCCGTTTGAGAAG+AGG - tig0022499:18377-18396 Msa1401020:intron 40.0%
TTGATGTTGCTGATGAGGAT+AGG - tig0022499:18416-18435 Msa1401020:intron 40.0%
TGATGTTGCTGATGAGGATA+GGG - tig0022499:18417-18436 Msa1401020:intron 40.0%
AAGAACTTGAGGGGAAAAGA+AGG - tig0022499:18473-18492 Msa1401020:intron 40.0%
TGGGTGTCTGTGGATAATTA+GGG + tig0022499:18756-18775 None:intergenic 40.0%
TTGGGTGTCTGTGGATAATT+AGG + tig0022499:18757-18776 None:intergenic 40.0%
TTCTTAAAGGAGTCTTGGCT+TGG + tig0022499:18780-18799 None:intergenic 40.0%
AGGAGTTCTTAAAGGAGTCT+TGG + tig0022499:18785-18804 None:intergenic 40.0%
! GTTCTCTGAGGAGTTCTTAA+AGG + tig0022499:18793-18812 None:intergenic 40.0%
! TTACTAGTTGGTGTTCTCTG+AGG + tig0022499:18805-18824 None:intergenic 40.0%
CAGAGAACACCAACTAGTAA+AGG - tig0022499:18805-18824 Msa1401020:intron 40.0%
AAATCTGAAGGATGCAACTC+CGG + tig0022499:18907-18926 None:intergenic 40.0%
TTGCATCCTTCAGATTTCTC+CGG - tig0022499:18910-18929 Msa1401020:intron 40.0%
AAAGAAAAACCATCCCTTGC+CGG + tig0022499:19036-19055 None:intergenic 40.0%
! GCAAGGGATGGTTTTTCTTT+TGG - tig0022499:19036-19055 Msa1401020:intron 40.0%
ATGAAAAAAAGTCTGCGCTC+TGG - tig0022499:19159-19178 Msa1401020:intron 40.0%
!! ACTCATTTTTAGGCTGTGGA+AGG + tig0022499:19194-19213 None:intergenic 40.0%
!! TGGTACTCATTTTTAGGCTG+TGG + tig0022499:19198-19217 None:intergenic 40.0%
GAATTGGTTGCATCACTATC+TGG + tig0022499:19218-19237 None:intergenic 40.0%
TAGAGAAAAGGCAGAAGAAG+AGG - tig0022499:19296-19315 Msa1401020:intron 40.0%
AACTCCTTGATAAGAGCTGA+CGG - tig0022499:19408-19427 Msa1401020:intron 40.0%
CTCCTTTCTTATCATCTCGT+CGG + tig0022499:19475-19494 None:intergenic 40.0%
GCTTGAGGAGATAGCAAATA+AGG - tig0022499:19533-19552 Msa1401020:intron 40.0%
TCTTCTATGACAGGGATAGT+AGG + tig0022499:19594-19613 None:intergenic 40.0%
CCCTGTCATAGAAGATTATC+AGG - tig0022499:19599-19618 Msa1401020:intron 40.0%
! TTGTTCACCTTTTCACCCTT+TGG - tig0022499:19713-19732 Msa1401020:intron 40.0%
TTGTGTACCAAAGGGTGAAA+AGG + tig0022499:19723-19742 None:intergenic 40.0%
AAGATTCCAGTGGTTTCGAA+GGG + tig0022499:19865-19884 None:intergenic 40.0%
TAAGATTCCAGTGGTTTCGA+AGG + tig0022499:19866-19885 None:intergenic 40.0%
GAACTAGTTGCATATTGTGG+TGG - tig0022499:19946-19965 Msa1401020:CDS 40.0%
CGAAAGTGGAAGGTAGAATT+TGG + tig0022499:20136-20155 None:intergenic 40.0%
TGCTTCAACAAATTCCTCGA+GGG + tig0022499:20440-20459 None:intergenic 40.0%
TAGATAGACCATAGGCGTTA+CGG + tig0022499:20501-20520 None:intergenic 40.0%
AGCAACACTAGATAGACCAT+AGG + tig0022499:20509-20528 None:intergenic 40.0%
TATGGTCTATCTAGTGTTGC+TGG - tig0022499:20508-20527 Msa1401020:intron 40.0%
TGAGAATGTGAGAAGTAAGC+TGG - tig0022499:20567-20586 Msa1401020:intron 40.0%
TGAGAAGTAAGCTGGATGAT+GGG - tig0022499:20575-20594 Msa1401020:intron 40.0%
! GATGATTCGACTTGAGAAGA+AGG - tig0022499:20612-20631 Msa1401020:intron 40.0%
GGATCAGCTTGATTGGAATT+TGG - tig0022499:21066-21085 Msa1401020:CDS 40.0%
!!! TCAAGTCTGTTTTGTTTGGC+CGG + tig0022499:21281-21300 None:intergenic 40.0%
GTGGTCATGTGGTTTATTGA+AGG - tig0022499:21320-21339 Msa1401020:CDS 40.0%
TTTATTGAAGGCTTCGAGCA+TGG - tig0022499:21332-21351 Msa1401020:CDS 40.0%
TTATTGAAGGCTTCGAGCAT+GGG - tig0022499:21333-21352 Msa1401020:CDS 40.0%
!! CCACTCCTTTTCTTAACTTG+AGG + tig0022499:21399-21418 None:intergenic 40.0%
CCTCAAGTTAAGAAAAGGAG+TGG - tig0022499:21396-21415 Msa1401020:CDS 40.0%
GACTGACACTTATTGTATCG+AGG - tig0022499:21418-21437 Msa1401020:CDS 40.0%
!! TATCGAGGAATGGATTGTCT+TGG - tig0022499:21433-21452 Msa1401020:CDS 40.0%
! CTTTTCTAACTCGGTTGTCA+AGG - tig0022499:21474-21493 Msa1401020:CDS 40.0%
! TTAAGGTGGACTCATGGAAA+TGG - tig0022499:21518-21537 Msa1401020:CDS 40.0%
ATGGAAATGGTTACTGCCAA+GGG - tig0022499:21531-21550 Msa1401020:CDS 40.0%
GGAAGGGGTCTTTATAATAG+TGG - tig0022499:21562-21581 Msa1401020:CDS 40.0%
AGTCTCTATAGTGTGTAAGC+TGG - tig0022499:21616-21635 Msa1401020:CDS 40.0%
!!! TTATTTTTATGCGGCAGCAG+AGG + tig0022499:21745-21764 None:intergenic 40.0%
CTGTGATTCACATGATGCAA+TGG - tig0022499:21887-21906 Msa1401020:CDS 40.0%
TGCAATGGTCCTACAAAGAA+AGG - tig0022499:21902-21921 Msa1401020:CDS 40.0%
GCAATGGTCCTACAAAGAAA+GGG - tig0022499:21903-21922 Msa1401020:CDS 40.0%
CAATGGTCCTACAAAGAAAG+GGG - tig0022499:21904-21923 Msa1401020:CDS 40.0%
GTTCTTTCTAACACCGAGAA+AGG - tig0022499:21990-22009 Msa1401020:CDS 40.0%
AAAATCTGCAACAGTGCAAG+TGG - tig0022499:22050-22069 Msa1401020:CDS 40.0%
AAATCTGCAACAGTGCAAGT+GGG - tig0022499:22051-22070 Msa1401020:CDS 40.0%
! TTGAAAGTAGCCTCGATTTG+TGG + tig0022499:22336-22355 None:intergenic 40.0%
! GTCTGAAGTTCAGAAGCAAA+AGG - tig0022499:22449-22468 Msa1401020:CDS 40.0%
CTCTTCTATTGCACGATTCT+TGG + tig0022499:22589-22608 None:intergenic 40.0%
CAAGAATCGTGCAATAGAAG+AGG - tig0022499:22587-22606 Msa1401020:CDS 40.0%
! AGAGGTACAAGCACAACAAA+AGG - tig0022499:22605-22624 Msa1401020:CDS 40.0%
CTCCAAAATTGACATGGATG+TGG - tig0022499:22827-22846 Msa1401020:exon 40.0%
GCACAAATGACAGACAGTAT+TGG - tig0022499:22861-22880 Msa1401020:intron 40.0%
AAGTAATGAGGGAAATGAGG+AGG - tig0022499:23001-23020 Msa1401020:five_prime_UTR 40.0%
AGTAATGAGGGAAATGAGGA+GGG - tig0022499:23002-23021 Msa1401020:five_prime_UTR 40.0%
TGGGAATCCAGATGAGATTA+TGG - tig0022499:23034-23053 Msa1401020:five_prime_UTR 40.0%
GAAGCTTCCATAATCTCATC+TGG + tig0022499:23044-23063 None:intergenic 40.0%
AGCGGAGTTATGCTATTATC+AGG + tig0022499:23074-23093 None:intergenic 40.0%
GCAATTTGCATGTCATCAAG+CGG + tig0022499:23092-23111 None:intergenic 40.0%
TGCTGATGATAAAGGAGATG+AGG - tig0022499:23109-23128 Msa1401020:intron 40.0%
CGAATGAATTGCATGGAAAG+TGG - tig0022499:23221-23240 Msa1401020:intron 40.0%
TCCACTCCGAAAAGTAACAA+GGG + tig0022499:23308-23327 None:intergenic 40.0%
ATCCACTCCGAAAAGTAACA+AGG + tig0022499:23309-23328 None:intergenic 40.0%
!! TTACTTTTCGGAGTGGATGT+TGG - tig0022499:23311-23330 Msa1401020:intron 40.0%
AGAGATTGATACCTGCGGTT+TGG + tig0022499:17153-17172 None:intergenic 45.0%
TCTTCCGCTCACCCTAAATT+TGG - tig0022499:17284-17303 Msa1401020:three_prime_UTR 45.0%
TTCTGGGTCGGCCAAATTTA+GGG + tig0022499:17298-17317 None:intergenic 45.0%
!! CCGACCCAGAAGTTGATTTT+TGG - tig0022499:17307-17326 Msa1401020:three_prime_UTR 45.0%
ACTTGTACATCACCGAGTAC+GGG - tig0022499:17488-17507 Msa1401020:CDS 45.0%
GAATGAGAATGTGAGAGGCA+AGG + tig0022499:17567-17586 None:intergenic 45.0%
GTGGTGAATGAGAATGTGAG+AGG + tig0022499:17572-17591 None:intergenic 45.0%
AGAGAATGATACCTGCGGTT+TGG + tig0022499:17600-17619 None:intergenic 45.0%
AAGCGAGAGAATGATACCTG+CGG + tig0022499:17605-17624 None:intergenic 45.0%
GCTGAAAATCACGAAATGCG+TGG + tig0022499:17645-17664 None:intergenic 45.0%
!! ACGAAATGGGTTACTGCAAC+AGG + tig0022499:17697-17716 None:intergenic 45.0%
AGGTGTTTGGAAAAACACCG+AGG - tig0022499:17766-17785 Msa1401020:CDS 45.0%
TGCAGATTTGCGAACGAGTA+GGG + tig0022499:17852-17871 None:intergenic 45.0%
TTGCAGATTTGCGAACGAGT+AGG + tig0022499:17853-17872 None:intergenic 45.0%
GTAAAGCTCGTTGGTATGAG+TGG - tig0022499:17879-17898 Msa1401020:CDS 45.0%
CTAAGCTTATGCCTACTCAG+TGG - tig0022499:17966-17985 Msa1401020:CDS 45.0%
AGAACCATTGCTCCCATTGT+TGG - tig0022499:17989-18008 Msa1401020:CDS 45.0%
! GAAGGAGTACGACCAACAAT+GGG + tig0022499:18004-18023 None:intergenic 45.0%
AATTTCCTAGGGTCATCACC+AGG + tig0022499:18091-18110 None:intergenic 45.0%
! GCAGGCTTTGATTCAGGATT+CGG + tig0022499:18133-18152 None:intergenic 45.0%
AGGCTGCTGGGATTGATATA+AGG - tig0022499:18317-18336 Msa1401020:intron 45.0%
CTGGGATTGATATAAGGCAG+CGG - tig0022499:18323-18342 Msa1401020:intron 45.0%
ACATCAAAATAACCCGGAGG+AGG + tig0022499:18403-18422 None:intergenic 45.0%
GCAACATCAAAATAACCCGG+AGG + tig0022499:18406-18425 None:intergenic 45.0%
TCAATAGTAGTAGGGAACGC+AGG + tig0022499:18454-18473 None:intergenic 45.0%
TGAGAAAGCAAGACGTTGCA+AGG - tig0022499:18515-18534 Msa1401020:intron 45.0%
TTCTGGGTCATTCAGCTTGT+TGG + tig0022499:18587-18606 None:intergenic 45.0%
TCTTGATCGGAAATCTGAGG+CGG + tig0022499:18643-18662 None:intergenic 45.0%
!! AAAGGAGTCTTGGCTTGGTT+GGG + tig0022499:18775-18794 None:intergenic 45.0%
!! TAAAGGAGTCTTGGCTTGGT+TGG + tig0022499:18776-18795 None:intergenic 45.0%
TGGAAGCTGAAAATTTGGCC+AGG - tig0022499:18842-18861 Msa1401020:intron 45.0%
TGAAAATTTGGCCAGGCTGA+GGG - tig0022499:18849-18868 Msa1401020:intron 45.0%
ACTGTTAGGAGGAGAAAACC+CGG - tig0022499:18885-18904 Msa1401020:intron 45.0%
AATCTGAAGGATGCAACTCC+GGG + tig0022499:18906-18925 None:intergenic 45.0%
TGCATCCTTCAGATTTCTCC+GGG - tig0022499:18911-18930 Msa1401020:intron 45.0%
! CTTTTTCTTAGGAGTGACCC+CGG + tig0022499:18932-18951 None:intergenic 45.0%
! TCATACCACTTCTGGGAGTA+AGG + tig0022499:19011-19030 None:intergenic 45.0%
! TTCTTTTGGCATGACTCCGA+AGG - tig0022499:19050-19069 Msa1401020:intron 45.0%
! TCTTTTGGCATGACTCCGAA+GGG - tig0022499:19051-19070 Msa1401020:intron 45.0%
ATATGTAGCTCATCCCTGAG+AGG + tig0022499:19081-19100 None:intergenic 45.0%
ATAGTGCTAAGCTCGAGCTA+CGG - tig0022499:19124-19143 Msa1401020:intron 45.0%
TCCTCTTCAATCTTCTCCTC+AGG + tig0022499:19258-19277 None:intergenic 45.0%
AAAAGGCAGAAGAAGAGGCA+CGG - tig0022499:19301-19320 Msa1401020:intron 45.0%
TCCTTCAAAGGGAACTTCCT+AGG - tig0022499:19355-19374 Msa1401020:intron 45.0%
!! TGGCATCTCTGGAGCTTATT+AGG - tig0022499:19385-19404 Msa1401020:intron 45.0%
AGCCGACGAGATGATAAGAA+AGG - tig0022499:19470-19489 Msa1401020:intron 45.0%
!! AAAGGAGCTTCTAGCCTTAC+TGG - tig0022499:19488-19507 Msa1401020:intron 45.0%
CAATGCTAAGTATCCGCTTG+AGG - tig0022499:19518-19537 Msa1401020:intron 45.0%
GATCCAAACGAGCAGCAAAT+GGG - tig0022499:19568-19587 Msa1401020:intron 45.0%
TGGTTTCGAAGGGGTGAAAA+GGG + tig0022499:19855-19874 None:intergenic 45.0%
AGATTCCAGTGGTTTCGAAG+GGG + tig0022499:19864-19883 None:intergenic 45.0%
TGGGGAATTACGACTGAATC+AGG + tig0022499:20116-20135 None:intergenic 45.0%
CATTGCCTCACGAAGATACT+GGG + tig0022499:20401-20420 None:intergenic 45.0%
CAGTATCTTCGTGAGGCAAT+GGG - tig0022499:20400-20419 Msa1401020:intron 45.0%
AGTATCTTCGTGAGGCAATG+GGG - tig0022499:20401-20420 Msa1401020:intron 45.0%
GCATGAAAATGATTCCCTCG+AGG - tig0022499:20423-20442 Msa1401020:intron 45.0%
GTGCTTCAACAAATTCCTCG+AGG + tig0022499:20441-20460 None:intergenic 45.0%
TTTGATACCCGTAACGCCTA+TGG - tig0022499:20490-20509 Msa1401020:intron 45.0%
AGATAGACCATAGGCGTTAC+GGG + tig0022499:20500-20519 None:intergenic 45.0%
! ATCTAGTGTTGCTGGAAACG+CGG - tig0022499:20516-20535 Msa1401020:intron 45.0%
GTGAGAAGTAAGCTGGATGA+TGG - tig0022499:20574-20593 Msa1401020:intron 45.0%
!! AAGTAAGCTGGATGATGGGA+AGG - tig0022499:20579-20598 Msa1401020:intron 45.0%
AAGGTTACACTACACACGCA+AGG - tig0022499:20631-20650 Msa1401020:intron 45.0%
AGGTTACACTACACACGCAA+GGG - tig0022499:20632-20651 Msa1401020:intron 45.0%
AATGAAAGCAGGTAAGCAGC+TGG + tig0022499:20771-20790 None:intergenic 45.0%
GTCTCAATGCCCTTCAAAGT+TGG - tig0022499:20849-20868 Msa1401020:intron 45.0%
GGCATTCCCATGGCATATAA+TGG - tig0022499:20942-20961 Msa1401020:intron 45.0%
! AGCAGATTAAGGTGGACTCA+TGG - tig0022499:21512-21531 Msa1401020:CDS 45.0%
CATGGAAATGGTTACTGCCA+AGG - tig0022499:21530-21549 Msa1401020:CDS 45.0%
! GGGGTCTTTATAATAGTGGG+TGG - tig0022499:21566-21585 Msa1401020:CDS 45.0%
CTCTATAGTGTGTAAGCTGG+CGG - tig0022499:21619-21638 Msa1401020:CDS 45.0%
TCTATAGTGTGTAAGCTGGC+GGG - tig0022499:21620-21639 Msa1401020:CDS 45.0%
GGGAGAAATAAAAGTTCCGG+AGG + tig0022499:21792-21811 None:intergenic 45.0%
!! AGTATGAAAGTGTTAGGGCG+TGG - tig0022499:21952-21971 Msa1401020:CDS 45.0%
!! GTATGAAAGTGTTAGGGCGT+GGG - tig0022499:21953-21972 Msa1401020:CDS 45.0%
TACTTTCAAGCAGATGGACG+TGG - tig0022499:22347-22366 Msa1401020:CDS 45.0%
! GAAGAGGTATGGGGATCTTA+TGG - tig0022499:22491-22510 Msa1401020:CDS 45.0%
ATCTTATGGCAGAGCTGGAA+AGG - tig0022499:22505-22524 Msa1401020:CDS 45.0%
GGGTACAGCAAATAGTGAAG+CGG - tig0022499:22749-22768 Msa1401020:CDS 45.0%
! TATTTGCTGGTCAGCTGAGA+GGG + tig0022499:22778-22797 None:intergenic 45.0%
AATAGCCACCATGCAAGATC+AGG - tig0022499:22794-22813 Msa1401020:CDS 45.0%
AGAAGTAGCCTGATCTTGCA+TGG + tig0022499:22805-22824 None:intergenic 45.0%
! CACAGTAGATATGAGTGCTG+CGG - tig0022499:22968-22987 Msa1401020:intron 45.0%
TCATCTGGATTCCCAACATC+TGG + tig0022499:23029-23048 None:intergenic 45.0%
GGAGATGAGGCAAATTAGGT+TGG - tig0022499:23122-23141 Msa1401020:intron 45.0%
TGCAAAGCTCGTCATGTCAA+TGG + tig0022499:23452-23471 None:intergenic 45.0%
GTCAGGACCATTCAACAATC+AGG + tig0022499:23483-23502 None:intergenic 45.0%
GGAAAGTCTATATAGGGGTC+AGG + tig0022499:23500-23519 None:intergenic 45.0%
!! ATAATTAAATAGAAAAAATT+TGG - tig0022499:19890-19909 Msa1401020:intron 5.0%
!! ATTTATATAAATAATATGAA+GGG + tig0022499:21716-21735 None:intergenic 5.0%
!! TATTTATATAAATAATATGA+AGG + tig0022499:21717-21736 None:intergenic 5.0%
!!! TTTTTTTTTTTATTTTTATG+CGG + tig0022499:21754-21773 None:intergenic 5.0%
!! AAAAAAAAATAAGTAAAATT+AGG - tig0022499:21766-21785 Msa1401020:CDS 5.0%
CAGATCTGAAGACGACGATG+CGG + tig0022499:17118-17137 None:intergenic 50.0%
!! ATACCTGCGGTTTGGTGACA+GGG + tig0022499:17145-17164 None:intergenic 50.0%
! TTTAGGGTGAGCGGAAGAGA+GGG + tig0022499:17282-17301 None:intergenic 50.0%
! ATTTAGGGTGAGCGGAAGAG+AGG + tig0022499:17283-17302 None:intergenic 50.0%
! TCGGCCAAATTTAGGGTGAG+CGG + tig0022499:17291-17310 None:intergenic 50.0%
CTTCTGGGTCGGCCAAATTT+AGG + tig0022499:17299-17318 None:intergenic 50.0%
! CAGCTAGGGTTCTGATATGG+TGG + tig0022499:17544-17563 None:intergenic 50.0%
! AGGCAGCTAGGGTTCTGATA+TGG + tig0022499:17547-17566 None:intergenic 50.0%
! TGATACCTGCGGTTTGGAGA+CGG + tig0022499:17594-17613 None:intergenic 50.0%
GCAGTAACCCATTTCGTGAG+AGG - tig0022499:17700-17719 Msa1401020:CDS 50.0%
GCAATGGTTCTCCACTGAGT+AGG + tig0022499:17980-17999 None:intergenic 50.0%
ACGACCAACAATGGGAGCAA+TGG + tig0022499:17996-18015 None:intergenic 50.0%
! CGAAGGAGTACGACCAACAA+TGG + tig0022499:18005-18024 None:intergenic 50.0%
TAGCGTTCAAGACACTGCGA+AGG + tig0022499:18022-18041 None:intergenic 50.0%
! CCTTAACACAAGCGGTGTCA+AGG + tig0022499:18054-18073 None:intergenic 50.0%
CCTTGACACCGCTTGTGTTA+AGG - tig0022499:18051-18070 Msa1401020:CDS 50.0%
! ATGAACCTGGTGATGACCCT+AGG - tig0022499:18083-18102 Msa1401020:CDS 50.0%
TGACCCTAGGAAATTGCGTC+CGG - tig0022499:18096-18115 Msa1401020:CDS 50.0%
GCGACCTGATCCTGTTGATA+TGG - tig0022499:18153-18172 Msa1401020:CDS 50.0%
AGCTAGGGAGAAACAGCTTG+AGG - tig0022499:18252-18271 Msa1401020:CDS 50.0%
AGAAACAGCTTGAGGAAGCG+AGG - tig0022499:18260-18279 Msa1401020:intron 50.0%
AAGAGAGAACTGAAGGCTGC+TGG - tig0022499:18304-18323 Msa1401020:intron 50.0%
AGAGAGAACTGAAGGCTGCT+GGG - tig0022499:18305-18324 Msa1401020:intron 50.0%
GGATTGATATAAGGCAGCGG+AGG - tig0022499:18326-18345 Msa1401020:intron 50.0%
TTGATATAAGGCAGCGGAGG+AGG - tig0022499:18329-18348 Msa1401020:intron 50.0%
TGTTGCTGATGAGGATAGGG+AGG - tig0022499:18420-18439 Msa1401020:intron 50.0%
TGGCATGCAGAATAGCAGCT+GGG + tig0022499:18567-18586 None:intergenic 50.0%
TTGGCATGCAGAATAGCAGC+TGG + tig0022499:18568-18587 None:intergenic 50.0%
GTCACTGGCATAACCCAACT+TGG + tig0022499:18680-18699 None:intergenic 50.0%
GGTTATGCCAGTGACCTTGT+GGG - tig0022499:18685-18704 Msa1401020:intron 50.0%
CTGAAAATTTGGCCAGGCTG+AGG - tig0022499:18848-18867 Msa1401020:intron 50.0%
GAGTCTCAGACACCACTGTT+AGG - tig0022499:18871-18890 Msa1401020:intron 50.0%
TCTCAGACACCACTGTTAGG+AGG - tig0022499:18874-18893 Msa1401020:intron 50.0%
! GGGTTTTCTCCTCCTAACAG+TGG + tig0022499:18886-18905 None:intergenic 50.0%
GCATCCTTCAGATTTCTCCG+GGG - tig0022499:18912-18931 Msa1401020:intron 50.0%
CGGGGTCACTCCTAAGAAAA+AGG - tig0022499:18930-18949 Msa1401020:intron 50.0%
TTGCAGAAGGAGTCAGCAGT+GGG + tig0022499:18972-18991 None:intergenic 50.0%
AGAAGATGCTGAAGAGCCTG+AGG - tig0022499:19239-19258 Msa1401020:intron 50.0%
GCCTGAGGAGAAGATTGAAG+AGG - tig0022499:19254-19273 Msa1401020:intron 50.0%
GCCTAGGAAGTTCCCTTTGA+AGG + tig0022499:19359-19378 None:intergenic 50.0%
ATAAGCTCCAGAGATGCCAG+AGG + tig0022499:19384-19403 None:intergenic 50.0%
GTCTCCGTCAGCTCTTATCA+AGG + tig0022499:19415-19434 None:intergenic 50.0%
!! TCTCGTCGGCTTGCTCAATA+GGG + tig0022499:19461-19480 None:intergenic 50.0%
!! ATCTCGTCGGCTTGCTCAAT+AGG + tig0022499:19462-19481 None:intergenic 50.0%
AGCATTGTCGTGCTCCAGTA+AGG + tig0022499:19505-19524 None:intergenic 50.0%
GGATCCAAACGAGCAGCAAA+TGG - tig0022499:19567-19586 Msa1401020:intron 50.0%
GGTTTCGAAGGGGTGAAAAG+GGG + tig0022499:19854-19873 None:intergenic 50.0%
GTGGTTTCGAAGGGGTGAAA+AGG + tig0022499:19856-19875 None:intergenic 50.0%
TTTCACCCCTTCGAAACCAC+TGG - tig0022499:19856-19875 Msa1401020:intron 50.0%
TGAAGCCCAGTATCTTCGTG+AGG - tig0022499:20393-20412 Msa1401020:intron 50.0%
CCATTGCCTCACGAAGATAC+TGG + tig0022499:20402-20421 None:intergenic 50.0%
CCAGTATCTTCGTGAGGCAA+TGG - tig0022499:20399-20418 Msa1401020:intron 50.0%
! ACTACACACGCAAGGGTATG+AGG - tig0022499:20639-20658 Msa1401020:intron 50.0%
! GACCTTGTTTGGCATTCCCA+TGG - tig0022499:20932-20951 Msa1401020:intron 50.0%
TGCCATGGGAATGCCAAACA+AGG + tig0022499:20937-20956 None:intergenic 50.0%
GGATGGAGGATCAGCTTGAT+TGG - tig0022499:21059-21078 Msa1401020:CDS 50.0%
TTGAGGTCGTAGTGGTCATG+TGG - tig0022499:21309-21328 Msa1401020:CDS 50.0%
AAGTGTTAGGGCGTGGGAAA+TGG - tig0022499:21959-21978 Msa1401020:CDS 50.0%
! TAGCCTCGATTTGTGGCCAA+AGG + tig0022499:22329-22348 None:intergenic 50.0%
! CGAGGCTACTTTCAAGCAGA+TGG - tig0022499:22341-22360 Msa1401020:CDS 50.0%
AGCAGTCAGCAGCATCACAT+AGG - tig0022499:22412-22431 Msa1401020:CDS 50.0%
CAGGGTACAAGCACAACAGA+AGG - tig0022499:22551-22570 Msa1401020:CDS 50.0%
! ATTTGCTGGTCAGCTGAGAG+GGG + tig0022499:22777-22796 None:intergenic 50.0%
! CTATTTGCTGGTCAGCTGAG+AGG + tig0022499:22779-22798 None:intergenic 50.0%
CTTGCATGGTGGCTATTTGC+TGG + tig0022499:22791-22810 None:intergenic 50.0%
AGTAGCCTGATCTTGCATGG+TGG + tig0022499:22802-22821 None:intergenic 50.0%
TTTGAATGCTCATCCTCGGC+AGG + tig0022499:22909-22928 None:intergenic 50.0%
CGCAGCACTCATATCTACTG+TGG + tig0022499:22970-22989 None:intergenic 50.0%
! AGTAGATATGAGTGCTGCGG+TGG - tig0022499:22971-22990 Msa1401020:intron 50.0%
AATGAGGAGGGTCCAGATGT+TGG - tig0022499:23014-23033 Msa1401020:five_prime_UTR 50.0%
ATGAGGAGGGTCCAGATGTT+GGG - tig0022499:23015-23034 Msa1401020:five_prime_UTR 50.0%
!!! GCCCTTGTTACTTTTCGGAG+TGG - tig0022499:23304-23323 Msa1401020:intron 50.0%
ATCTGAAGACGACGATGCGG+CGG + tig0022499:17115-17134 None:intergenic 55.0%
!! TACCTGCGGTTTGGTGACAG+GGG + tig0022499:17144-17163 None:intergenic 55.0%
!! GATACCTGCGGTTTGGTGAC+AGG + tig0022499:17146-17165 None:intergenic 55.0%
GAAAGGGGTAGTCCCGTACT+CGG + tig0022499:17503-17522 None:intergenic 55.0%
TGTGAGAGGCAAGGCAGCTA+GGG + tig0022499:17558-17577 None:intergenic 55.0%
ATGTGAGAGGCAAGGCAGCT+AGG + tig0022499:17559-17578 None:intergenic 55.0%
! GACTGAGTGGACTCGAGAAG+AGG - tig0022499:17922-17941 Msa1401020:CDS 55.0%
GACCCTAGGAAATTGCGTCC+GGG - tig0022499:18097-18116 Msa1401020:CDS 55.0%
ACCCTAGGAAATTGCGTCCG+GGG - tig0022499:18098-18117 Msa1401020:CDS 55.0%
GGATTCGGATCAATCTCCCC+CGG + tig0022499:18118-18137 None:intergenic 55.0%
TGCTTTCCGAAGCACGTGCT+CGG - tig0022499:18194-18213 Msa1401020:CDS 55.0%
! GCTCGGTTGGCTAACACGAA+AGG - tig0022499:18211-18230 Msa1401020:CDS 55.0%
AACAGCTTGAGGAAGCGAGG+AGG - tig0022499:18263-18282 Msa1401020:intron 55.0%
TAAGGCAGCGGAGGAGGAAA+AGG - tig0022499:18335-18354 Msa1401020:intron 55.0%
AGCGGAGGAGGAAAAGGAGA+GGG - tig0022499:18341-18360 Msa1401020:intron 55.0%
GGAGGAGGCCTCTTCTCAAA+CGG + tig0022499:18388-18407 None:intergenic 55.0%
GTTTGAGAAGAGGCCTCCTC+CGG - tig0022499:18387-18406 Msa1401020:intron 55.0%
TTTGAGAAGAGGCCTCCTCC+GGG - tig0022499:18388-18407 Msa1401020:intron 55.0%
TGCTGATGAGGATAGGGAGG+TGG - tig0022499:18423-18442 Msa1401020:intron 55.0%
GGCATGCAGAATAGCAGCTG+GGG + tig0022499:18566-18585 None:intergenic 55.0%
! TGATCGGAAATCTGAGGCGG+TGG + tig0022499:18640-18659 None:intergenic 55.0%
GGGTTATGCCAGTGACCTTG+TGG - tig0022499:18684-18703 Msa1401020:intron 55.0%
ACGAGTAGCACTGCTGCCTT+CGG + tig0022499:18725-18744 None:intergenic 55.0%
!! TTGGCTTGGTTGGGTGTCTG+TGG + tig0022499:18766-18785 None:intergenic 55.0%
GTGACCCCGGAGAAATCTGA+AGG + tig0022499:18919-18938 None:intergenic 55.0%
! GAAGGAGTCAGCAGTGGGTT+TGG + tig0022499:18967-18986 None:intergenic 55.0%
GTTGCAGAAGGAGTCAGCAG+TGG + tig0022499:18973-18992 None:intergenic 55.0%
AGTAAGGCCTGCACTTCCAG+GGG + tig0022499:18995-19014 None:intergenic 55.0%
GAGTAAGGCCTGCACTTCCA+GGG + tig0022499:18996-19015 None:intergenic 55.0%
TCCCAGAAGTGGTATGACGC+CGG - tig0022499:19014-19033 Msa1401020:intron 55.0%
AAGTGGTATGACGCCGGCAA+GGG - tig0022499:19020-19039 Msa1401020:intron 55.0%
TCCGAAGGGAACTCCTCTCA+GGG - tig0022499:19065-19084 Msa1401020:intron 55.0%
TCCCTGAGAGGAGTTCCCTT+CGG + tig0022499:19069-19088 None:intergenic 55.0%
GCTTGCTCAATAGGGGTTGG+TGG + tig0022499:19453-19472 None:intergenic 55.0%
! TCGGCTTGCTCAATAGGGGT+TGG + tig0022499:19456-19475 None:intergenic 55.0%
!! CTCGTCGGCTTGCTCAATAG+GGG + tig0022499:19460-19479 None:intergenic 55.0%
! AGGCCCATTTGCTGCTCGTT+TGG + tig0022499:19574-19593 None:intergenic 55.0%
!! GCTGGATGATGGGAAGGAGA+AGG - tig0022499:20585-20604 Msa1401020:intron 55.0%
AGGTAAGCAGCTGGCATCCA+AGG + tig0022499:20762-20781 None:intergenic 55.0%
TGGTTACTGCCAAGGGCGAA+AGG - tig0022499:21538-21557 Msa1401020:CDS 55.0%
TTACTGCCAAGGGCGAAAGG+AGG - tig0022499:21541-21560 Msa1401020:CDS 55.0%
AGGCCTTTGGCCACAAATCG+AGG - tig0022499:22323-22342 Msa1401020:CDS 55.0%
TGGGGATCTTATGGCAGAGC+TGG - tig0022499:22500-22519 Msa1401020:CDS 55.0%
! TACCTGCGGTTTGGAGACGG+TGG + tig0022499:17591-17610 None:intergenic 60.0%
CCCCCGGACGCAATTTCCTA+GGG + tig0022499:18102-18121 None:intergenic 60.0%
CCCTAGGAAATTGCGTCCGG+GGG - tig0022499:18099-18118 Msa1401020:CDS 60.0%
TCCCCCGGACGCAATTTCCT+AGG + tig0022499:18103-18122 None:intergenic 60.0%
! GGTCGCGCAGGCTTTGATTC+AGG + tig0022499:18139-18158 None:intergenic 60.0%
TCAACAGGATCAGGTCGCGC+AGG + tig0022499:18151-18170 None:intergenic 60.0%
TTCCGAAGCACGTGCTCGGT+TGG - tig0022499:18198-18217 Msa1401020:CDS 60.0%
AGCCAACCGAGCACGTGCTT+CGG + tig0022499:18203-18222 None:intergenic 60.0%
CAGCGGAGGAGGAAAAGGAG+AGG - tig0022499:18340-18359 Msa1401020:intron 60.0%
TGAGTTCCTCGCTGCCCACA+AGG + tig0022499:18702-18721 None:intergenic 60.0%
! TGTCTGAGACTCCCTCAGCC+TGG + tig0022499:18863-18882 None:intergenic 60.0%
CTGACTCCTTCTGCAACCCC+TGG - tig0022499:18976-18995 Msa1401020:intron 60.0%
GCACTTCCAGGGGTTGCAGA+AGG + tig0022499:18985-19004 None:intergenic 60.0%
! TCTGCAACCCCTGGAAGTGC+AGG - tig0022499:18985-19004 Msa1401020:intron 60.0%
GGAGTAAGGCCTGCACTTCC+AGG + tig0022499:18997-19016 None:intergenic 60.0%
GCAGGCCTTACTCCCAGAAG+TGG - tig0022499:19003-19022 Msa1401020:intron 60.0%
GCCGGCGTCATACCACTTCT+GGG + tig0022499:19018-19037 None:intergenic 60.0%
TGCCGGCGTCATACCACTTC+TGG + tig0022499:19019-19038 None:intergenic 60.0%
GAAGTGGTATGACGCCGGCA+AGG - tig0022499:19019-19038 Msa1401020:intron 60.0%
CTCCGAAGGGAACTCCTCTC+AGG - tig0022499:19064-19083 Msa1401020:intron 60.0%
! AGAAGAAGAGGCACGGCAGC+AGG - tig0022499:19308-19327 Msa1401020:intron 60.0%
GGAACTTCCTAGGCCTCCTC+TGG - tig0022499:19365-19384 Msa1401020:intron 60.0%
AGAGATGCCAGAGGAGGCCT+AGG + tig0022499:19375-19394 None:intergenic 60.0%
TAGGCCTCCTCTGGCATCTC+TGG - tig0022499:19374-19393 Msa1401020:intron 60.0%
AGCTCCAGAGATGCCAGAGG+AGG + tig0022499:19381-19400 None:intergenic 60.0%
TGCCAAGGGCGAAAGGAGGA+AGG - tig0022499:21545-21564 Msa1401020:CDS 60.0%
GCCAAGGGCGAAAGGAGGAA+GGG - tig0022499:21546-21565 Msa1401020:CDS 60.0%
CCAAGGGCGAAAGGAGGAAG+GGG - tig0022499:21547-21566 Msa1401020:CDS 60.0%
GAATGCTCATCCTCGGCAGG+AGG + tig0022499:22906-22925 None:intergenic 60.0%
CACCACCGTCTCCAAACCGC+AGG - tig0022499:17586-17605 Msa1401020:CDS 65.0%
CTCGCTGCCCACAAGGTCAC+TGG + tig0022499:18695-18714 None:intergenic 65.0%
CAGTGACCTTGTGGGCAGCG+AGG - tig0022499:18693-18712 Msa1401020:intron 65.0%
GGCAGCGAGGAACTCACCGA+AGG - tig0022499:18706-18725 Msa1401020:intron 65.0%
GGTATGACGCCGGCAAGGGA+TGG - tig0022499:19024-19043 Msa1401020:intron 65.0%
CCCCTTCCTCCTTTCGCCCT+TGG + tig0022499:21550-21569 None:intergenic 65.0%
! TCCTCGGCAGGAGGTGCATC+TGG + tig0022499:22897-22916 None:intergenic 65.0%
CGCCCCTGTCACCAAACCGC+AGG - tig0022499:17139-17158 Msa1401020:three_prime_UTR 70.0%
GCCAGATGCACCTCCTGCCG+AGG - tig0022499:22893-22912 Msa1401020:intron 70.0%
Chromosome Type Strat End Strand Name
tig0022499 gene 17018 23563 17018 ID=Msa1401020;Name=Msa1401020
tig0022499 mRNA 17018 23563 17018 ID=Msa1401020-mRNA-1;Parent=Msa1401020;Name=Msa1401020-mRNA-1;_AED=0.05;_eAED=0.05;_QI=327|1|1|1|0.5|0.4|5|424|1003
tig0022499 exon 17018 18272 17018 ID=Msa1401020-mRNA-1:exon:18105;Parent=Msa1401020-mRNA-1
tig0022499 exon 19921 20208 19921 ID=Msa1401020-mRNA-1:exon:18104;Parent=Msa1401020-mRNA-1
tig0022499 exon 20943 22877 20943 ID=Msa1401020-mRNA-1:exon:18103;Parent=Msa1401020-mRNA-1
tig0022499 exon 22974 23115 22974 ID=Msa1401020-mRNA-1:exon:18102;Parent=Msa1401020-mRNA-1
tig0022499 exon 23421 23563 23421 ID=Msa1401020-mRNA-1:exon:18101;Parent=Msa1401020-mRNA-1
tig0022499 five_prime_UTR 23421 23563 23421 ID=Msa1401020-mRNA-1:five_prime_utr;Parent=Msa1401020-mRNA-1
tig0022499 five_prime_UTR 22974 23115 22974 ID=Msa1401020-mRNA-1:five_prime_utr;Parent=Msa1401020-mRNA-1
tig0022499 five_prime_UTR 22836 22877 22836 ID=Msa1401020-mRNA-1:five_prime_utr;Parent=Msa1401020-mRNA-1
tig0022499 CDS 20943 22835 20943 ID=Msa1401020-mRNA-1:cds;Parent=Msa1401020-mRNA-1
tig0022499 CDS 19921 20208 19921 ID=Msa1401020-mRNA-1:cds;Parent=Msa1401020-mRNA-1
tig0022499 CDS 17442 18272 17442 ID=Msa1401020-mRNA-1:cds;Parent=Msa1401020-mRNA-1
tig0022499 three_prime_UTR 17018 17441 17018 ID=Msa1401020-mRNA-1:three_prime_utr;Parent=Msa1401020-mRNA-1
Gene Sequence

>Msa1401020

ATGAGGATTATGATAAAGGGAGGTGTTTGGAAAAACACCGAGGATGAAATCCTGAAAGCTGCTGTTATGAAATATGGTAAAAATCAGTGGGCTCGTATCTCGTCCCTACTCGTTCGCAAATCTGCAAAACAGTGTAAAGCTCGTTGGTATGAGTGGTTAGATCCTTCCATTAAGAAGACTGAGTGGACTCGAGAAGAGGATGAGAAGCTACTTCATCTTGCTAAGCTTATGCCTACTCAGTGGAGAACCATTGCTCCCATTGTTGGTCGTACTCCTTCGCAGTGTCTTGAACGCTATGAGAAACTCCTTGACACCGCTTGTGTTAAGGATGATAACTATGAACCTGGTGATGACCCTAGGAAATTGCGTCCGGGGGAGATTGATCCGAATCCTGAATCAAAGCCTGCGCGACCTGATCCTGTTGATATGGATGAGGATGAGAAGGAGATGCTTTCCGAAGCACGTGCTCGGTTGGCTAACACGAAAGGTAAAAAAGCAAAAAGGAAAGCTAGGGAGAAACAGCTTGAGGAAGCGAGGAGGCTCGCTTCTTTACAGAAAAAGAGAGAACTGAAGGCTGCTGGGATTGATATAAGGCAGCGGAGGAGGAAAAGGAGAGGGATTGATTATAATGCAGAAATTCCGTTTGAGAAGAGGCCTCCTCCGGGTTATTTTGATGTTGCTGATGAGGATAGGGAGGTGGAGCAGCCTGCGTTCCCTACTACTATTGAAGAACTTGAGGGGAAAAGAAGGATTGATGTTGAGGCACAGTTGAGAAAGCAAGACGTTGCAAGGAATAAAATTGCAGAGAGGCAAGATGCCCCAGCTGCTATTCTGCATGCCAACAAGCTGAATGACCCAGAAACAGTTAGAAAGAGATCAAAACTGATGCTTCCACCGCCTCAGATTTCCGATCAAGAATTGGATGAAATTGCCAAGTTGGGTTATGCCAGTGACCTTGTGGGCAGCGAGGAACTCACCGAAGGCAGCAGTGCTACTCGTGCTCTTCTCCCTAATTATCCACAGACACCCAACCAAGCCAAGACTCCTTTAAGAACTCCTCAGAGAACACCAACTAGTAAAGGAGATGCTATCATGATGGAAGCTGAAAATTTGGCCAGGCTGAGGGAGTCTCAGACACCACTGTTAGGAGGAGAAAACCCGGAGTTGCATCCTTCAGATTTCTCCGGGGTCACTCCTAAGAAAAAGGAAATTCACACTCCAAACCCACTGCTGACTCCTTCTGCAACCCCTGGAAGTGCAGGCCTTACTCCCAGAAGTGGTATGACGCCGGCAAGGGATGGTTTTTCTTTTGGCATGACTCCGAAGGGAACTCCTCTCAGGGATGAGCTACATATCAATGAAGATATGGAGATGCGTGATAGTGCTAAGCTCGAGCTACGGAGACAAGCTGATATGAAAAAAAGTCTGCGCTCTGGTTTAAGCAGCCTTCCACAGCCTAAAAATGAGTACCAGATAGTGATGCAACCAATTCAAGAAGATGCTGAAGAGCCTGAGGAGAAGATTGAAGAGGATATGTCTGATAGAATGGCTAGAGAAAAGGCAGAAGAAGAGGCACGGCAGCAGGCATTACTTAGAAAACGATCAAAAGTCCTTCAAAGGGAACTTCCTAGGCCTCCTCTGGCATCTCTGGAGCTTATTAGGAACTCCTTGATAAGAGCTGACGGAGACAAAAGTTCATTTGTTCCACCAACCCCTATTGAGCAAGCCGACGAGATGATAAGAAAGGAGCTTCTAGCCTTACTGGAGCACGACAATGCTAAGTATCCGCTTGAGGAGATAGCAAATAAGGAGAAGAAGAAAGGATCCAAACGAGCAGCAAATGGGCCTACTATCCCTGTCATAGAAGATTATCAGGAGGACGAGATGAAATCTGCTGATCAGTTGATAAAAGATGAAGCCCAGTATCTTCGTGAGGCAATGGGGCATGAAAATGATTCCCTCGAGGAATTTGTTGAAGCACATACAACTTGCATTAATGATTTAATGTACTTTGATACCCGTAACGCCTATGGTCTATCTAGTGTTGCTGGAAACGCGGAGAAGCTAGCAGCTTTGCAGAATGAATTTGAGAATGTGAGAAGTAAGCTGGATGATGGGAAGGAGAAGGAGAAGATGATTCGACTTGAGAAGAAGGTTACACTACACACGCAAGGGTATGAGATGAGATCAAAAAAAGGCCTTTGGCCACAAATCGAGGCTACTTTCAAGCAGATGGACGTGGCTGCAACAGAATTCGAGTGTTTTCAAGCTTTAAAAAAGCAGGAGCAGTCAGCAGCATCACATAGGATAAACAATCTTTGGTCTGAAGTTCAGAAGCAAAAGGAACTTGAGAAAACTTTACAGAAGAGGTATGGGGATCTTATGGCAGAGCTGGAAAGGACACAAAATGTAATGGAGCACTTCAGGGTACAAGCACAACAGAAGGAAGAAATTGAAGCCAAGAATCGTGCAATAGAAGAGGTACAAGCACAACAAAAGGAAGAGATTGAAGCCAAGAATCATGCAATAGAAGAGGCACAAGCACAACAGCAAGAAGAAACTGAAGCTAAGAATCATGTACTTGAGAGTACTGGAGCCACAGCTGATGAAATTAATGTGCAGGGTACAGCAAATAGTGAAGCGGTGCCCCTCTCAGCTGACCAGCAAATAGCCACCATGCAAGATCAGGCTACTTCTAGCTCCAAAATTGACATGGATGTGGATTCTAGTGAAGCACAAATGACAGACAGTATTGGTGTTACATTGCCAGATGCACCTCCTGCCGAGGATGAGCATTCAAAAGTTGTAGAAGACAAAAACGTTGAAGAGAATAGTGAGACCACAGTAGATATGAGTGCTGCGGTGGAAATAAAAAGTAATGAGGGAAATGAGGAGGGTCCAGATGTTGGGAATCCAGATGAGATTATGGAAGCTTCAAACCAACCTGATAATAGCATAACTCCGCTTGATGACATGCAAATTGCTGATGATAAAGGAGATGAGGCAAATTAG
Protein sequence

>Msa1401020

MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDTACVKDDNYEPGDDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTKGKKAKRKAREKQLEEARRLASLQKKRELKAAGIDIRQRRRKRRGIDYNAEIPFEKRPPPGYFDVADEDREVEQPAFPTTIEELEGKRRIDVEAQLRKQDVARNKIAERQDAPAAILHANKLNDPETVRKRSKLMLPPPQISDQELDEIAKLGYASDLVGSEELTEGSSATRALLPNYPQTPNQAKTPLRTPQRTPTSKGDAIMMEAENLARLRESQTPLLGGENPELHPSDFSGVTPKKKEIHTPNPLLTPSATPGSAGLTPRSGMTPARDGFSFGMTPKGTPLRDELHINEDMEMRDSAKLELRRQADMKKSLRSGLSSLPQPKNEYQIVMQPIQEDAEEPEEKIEEDMSDRMAREKAEEEARQQALLRKRSKVLQRELPRPPLASLELIRNSLIRADGDKSSFVPPTPIEQADEMIRKELLALLEHDNAKYPLEEIANKEKKKGSKRAANGPTIPVIEDYQEDEMKSADQLIKDEAQYLREAMGHENDSLEEFVEAHTTCINDLMYFDTRNAYGLSSVAGNAEKLAALQNEFENVRSKLDDGKEKEKMIRLEKKVTLHTQGYEMRSKKGLWPQIEATFKQMDVAATEFECFQALKKQEQSAASHRINNLWSEVQKQKELEKTLQKRYGDLMAELERTQNVMEHFRVQAQQKEEIEAKNRAIEEVQAQQKEEIEAKNHAIEEAQAQQQEETEAKNHVLESTGATADEINVQGTANSEAVPLSADQQIATMQDQATSSSKIDMDVDSSEAQMTDSIGVTLPDAPPAEDEHSKVVEDKNVEENSETTVDMSAAVEIKSNEGNEEGPDVGNPDEIMEASNQPDNSITPLDDMQIADDKGDEAN*