Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0270200 | XP_039686116.1 | 95.016 | 943 | 35 | 4 | 1 | 939 | 1 | 935 | 0.0 | 1673 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0270200 | sp|Q9XHM1|EIF3C_MEDTR | 94.468 | 940 | 46 | 4 | 1 | 939 | 1 | 935 | 0.0 | 1639 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0270200 | Q1SL20 | 95.016 | 943 | 35 | 4 | 1 | 939 | 1 | 935 | 0.0 | 1673 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0035320 | Msa0270200 | 0.834475 | 2.934440e-56 | -8.615850e-47 |
Msa0047640 | Msa0270200 | 0.867008 | 1.878270e-65 | -8.615850e-47 |
Msa0051970 | Msa0270200 | 0.836405 | 9.538319e-57 | -8.615850e-47 |
Msa0080250 | Msa0270200 | 0.818303 | 2.102925e-52 | -8.615850e-47 |
Msa0128360 | Msa0270200 | 0.837486 | 5.052786e-57 | -8.615850e-47 |
Msa0138050 | Msa0270200 | 0.834033 | 3.787794e-56 | -8.615850e-47 |
Msa0140880 | Msa0270200 | 0.826002 | 3.444320e-54 | -8.615850e-47 |
Msa0167070 | Msa0270200 | 0.823568 | 1.291644e-53 | -8.615850e-47 |
Msa0187210 | Msa0270200 | 0.825476 | 4.591882e-54 | -8.615850e-47 |
Msa0188700 | Msa0270200 | 0.958360 | 2.858393e-116 | -8.615850e-47 |
Msa0227450 | Msa0270200 | 0.824631 | 7.269966e-54 | -8.615850e-47 |
Msa0268110 | Msa0270200 | 0.813401 | 2.607452e-51 | -8.615850e-47 |
Msa0270200 | Msa0270210 | 0.840001 | 1.130744e-57 | -8.615850e-47 |
Msa0270200 | Msa0307860 | 0.874489 | 6.490601e-68 | -8.615850e-47 |
Msa0270200 | Msa0369420 | 0.830259 | 3.247563e-55 | -8.615850e-47 |
Msa0270200 | Msa0402190 | 0.804837 | 1.783234e-49 | -8.615850e-47 |
Msa0270200 | Msa0428210 | 0.882417 | 1.060137e-70 | -8.615850e-47 |
Msa0270200 | Msa0435080 | 0.802042 | 6.767138e-49 | -8.615850e-47 |
Msa0270200 | Msa0463530 | 0.817074 | 3.981931e-52 | -8.615850e-47 |
Msa0270200 | Msa0474570 | 0.805534 | 1.274689e-49 | -8.615850e-47 |
Msa0270200 | Msa0513370 | 0.810472 | 1.133399e-50 | -8.615850e-47 |
Msa0270200 | Msa0519150 | 0.879844 | 8.940574e-70 | -8.615850e-47 |
Msa0270200 | Msa0544730 | 0.870538 | 1.353115e-66 | -8.615850e-47 |
Msa0270200 | Msa0546690 | 0.814573 | 1.438473e-51 | -8.615850e-47 |
Msa0270200 | Msa0572750 | 0.811945 | 5.429706e-51 | -8.615850e-47 |
Msa0270200 | Msa0586450 | 0.811260 | 7.651187e-51 | -8.615850e-47 |
Msa0270200 | Msa0608270 | 0.884153 | 2.445980e-71 | -8.615850e-47 |
Msa0270200 | Msa0626270 | 0.803134 | 4.029135e-49 | -8.615850e-47 |
Msa0270200 | Msa0648830 | 0.878814 | 2.071059e-69 | -8.615850e-47 |
Msa0270200 | Msa0691340 | 0.834661 | 2.634403e-56 | -8.615850e-47 |
Msa0270200 | Msa0748880 | 0.804018 | 2.641415e-49 | -8.615850e-47 |
Msa0270200 | Msa0760770 | 0.817622 | 2.997201e-52 | -8.615850e-47 |
Msa0270200 | Msa0762680 | 0.803055 | 4.184302e-49 | -8.615850e-47 |
Msa0270200 | Msa0790410 | 0.924895 | 3.819082e-90 | -8.615850e-47 |
Msa0270200 | Msa0790580 | 0.821036 | 4.997594e-53 | -8.615850e-47 |
Msa0270200 | Msa0805170 | 0.811370 | 7.243496e-51 | -8.615850e-47 |
Msa0270200 | Msa0818290 | 0.810397 | 1.176268e-50 | -8.615850e-47 |
Msa0270200 | Msa0959520 | 0.806338 | 8.633539e-50 | -8.615850e-47 |
Msa0270200 | Msa1031390 | 0.818643 | 1.760959e-52 | -8.615850e-47 |
Msa0270200 | Msa1055200 | 0.851399 | 9.101980e-61 | -8.615850e-47 |
Msa0270200 | Msa1072600 | 0.808428 | 3.112656e-50 | -8.615850e-47 |
Msa0270200 | Msa1095790 | 0.828084 | 1.094161e-54 | -8.615850e-47 |
Msa0270200 | Msa1129640 | 0.810326 | 1.218758e-50 | -8.615850e-47 |
Msa0270200 | Msa1305830 | 0.804891 | 1.737369e-49 | -8.615850e-47 |
Msa0270200 | Msa1375110 | 0.817842 | 2.673286e-52 | -8.615850e-47 |
Msa0270200 | Msa1401020 | 0.802778 | 4.773897e-49 | -8.615850e-47 |
Msa0270200 | Msa1403560 | 0.961194 | 2.026847e-119 | -8.615850e-47 |
Msa0270200 | Msa1403570 | 0.840457 | 8.596115e-58 | -8.615850e-47 |
Msa0270200 | Msa1433730 | 0.825065 | 5.742490e-54 | -8.615850e-47 |
Msa0270200 | Msa1440900 | 0.815779 | 7.760477e-52 | -8.615850e-47 |
Msa0270200 | Msa1443310 | 0.896075 | 5.224504e-76 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0270200 | MtrunA17_Chr2g0277001 | 95.016 | 943 | 35 | 4 | 1 | 939 | 1 | 935 | 0.0 | 1673 |
Msa0270200 | MtrunA17_Chr7g0275381 | 93.305 | 941 | 56 | 6 | 1 | 939 | 1 | 936 | 0.0 | 1669 |
Msa0270200 | MtrunA17_Chr1g0155771 | 94.468 | 940 | 46 | 4 | 1 | 939 | 1 | 935 | 0.0 | 1639 |
Msa0270200 | MtrunA17_Chr6g0468211 | 57.241 | 580 | 135 | 10 | 262 | 837 | 62 | 532 | 0.0 | 566 |
Msa0270200 | MtrunA17_Chr2g0316781 | 51.852 | 405 | 49 | 7 | 167 | 570 | 12 | 271 | 1.97e-113 | 349 |
Msa0270200 | MtrunA17_Chr2g0303811 | 81.935 | 155 | 28 | 0 | 568 | 722 | 1 | 155 | 9.93e-86 | 271 |
Msa0270200 | MtrunA17_Chr6g0468421 | 57.752 | 258 | 41 | 3 | 325 | 582 | 1 | 190 | 1.24e-83 | 267 |
Msa0270200 | MtrunA17_Chr6g0468011 | 60.606 | 198 | 47 | 4 | 262 | 457 | 12 | 180 | 7.65e-65 | 216 |
Msa0270200 | MtrunA17_Chr6g0468411 | 75.556 | 135 | 29 | 1 | 559 | 689 | 5 | 139 | 3.79e-63 | 211 |
Msa0270200 | MtrunA17_Chr2g0303821 | 61.468 | 109 | 41 | 1 | 730 | 837 | 1 | 109 | 2.20e-37 | 137 |
Msa0270200 | MtrunA17_Chr6g0467941 | 47.917 | 144 | 23 | 2 | 546 | 689 | 1 | 92 | 3.57e-31 | 118 |
Msa0270200 | MtrunA17_Chr6g0467931 | 65.347 | 101 | 33 | 2 | 729 | 827 | 1 | 101 | 4.54e-31 | 117 |
Msa0270200 | MtrunA17_Chr6g0468001 | 57.658 | 111 | 25 | 3 | 729 | 837 | 1 | 91 | 2.07e-28 | 111 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0270200 | AT3G56150.2 | 66.526 | 947 | 262 | 14 | 1 | 939 | 1 | 900 | 0.0 | 1154 |
Msa0270200 | AT3G56150.1 | 66.526 | 947 | 262 | 14 | 1 | 939 | 1 | 900 | 0.0 | 1154 |
Msa0270200 | AT3G22860.1 | 63.799 | 616 | 204 | 6 | 246 | 851 | 181 | 787 | 0.0 | 788 |
Find 271 sgRNAs with CRISPR-Local
Find 371 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCAATGTTTGTTCTGATTTA+TGG | 0.039660 | 2_3:-1488603 | Msa0270200:three_prime_UTR |
TCTGGTTGTTATGAGAATTT+AGG | 0.156316 | 2_3:+1492674 | None:intergenic |
CAAGAAGTTCAAAGAGATTC+TGG | 0.204715 | 2_3:-1491728 | Msa0270200:CDS |
GATTTCAGATGAAATTTCTT+TGG | 0.216565 | 2_3:-1488663 | Msa0270200:three_prime_UTR |
GCACTGTAAGCCAGAGATTT+TGG | 0.217294 | 2_3:-1488471 | Msa0270200:three_prime_UTR |
GCTGGGACTCATCTTCTTCT+TGG | 0.219134 | 2_3:+1492092 | None:intergenic |
TGTAAAGATTAGGGATCTTT+TGG | 0.232109 | 2_3:+1492172 | None:intergenic |
ACATGATCCCTGACAGTTTC+AGG | 0.235192 | 2_3:+1489513 | None:intergenic |
TGTTTGTCTGAACTTTATTC+TGG | 0.235265 | 2_3:-1490755 | Msa0270200:CDS |
CAATAATGTCAAAGGCCTTC+TGG | 0.238181 | 2_3:+1489454 | None:intergenic |
GGTTTCCGCGCCACAAGTTC+CGG | 0.248793 | 2_3:+1491055 | None:intergenic |
GCCACAAGGGTTCTTATTAA+TGG | 0.250263 | 2_3:-1489483 | Msa0270200:CDS |
AACCAATGGCTTCGAGATTC+TGG | 0.262577 | 2_3:-1492648 | Msa0270200:exon |
TGCTCAGGCTTCTGCTAATA+AGG | 0.263529 | 2_3:-1492118 | Msa0270200:CDS |
CTGGTTGTTATGAGAATTTA+GGG | 0.266616 | 2_3:+1492675 | None:intergenic |
GGAAAATAGCAGGACCTTAA+TGG | 0.268698 | 2_3:-1491023 | Msa0270200:CDS |
GTTGAAGGCTTTGGCATTGC+TGG | 0.280294 | 2_3:+1492074 | None:intergenic |
GAATCATCAACCTTTATGTT+TGG | 0.286060 | 2_3:+1491484 | None:intergenic |
TTTGGTTTGTAGGTATCTAT+TGG | 0.296703 | 2_3:+1492395 | None:intergenic |
CAACAACGGGTTTGGTTTGT+AGG | 0.300152 | 2_3:+1492385 | None:intergenic |
TATGCACTTAATCTAGATTC+TGG | 0.301092 | 2_3:-1488685 | Msa0270200:three_prime_UTR |
TCCAGTTCCCTTCCTGCCCC+TGG | 0.302069 | 2_3:+1491702 | None:intergenic |
ATCATATGATTCTTTCAGTT+TGG | 0.303868 | 2_3:-1489322 | Msa0270200:CDS |
CTTCATTGAGTTGAAGGCTT+TGG | 0.318286 | 2_3:+1492065 | None:intergenic |
CAGATTTAACAACACGCTTT+TGG | 0.326666 | 2_3:+1492337 | None:intergenic |
TTATGAAGCAACGAGAAAAT+TGG | 0.328433 | 2_3:-1491170 | Msa0270200:CDS |
GAGATGAGTGAGGAGTTAAA+AGG | 0.329554 | 2_3:-1491118 | Msa0270200:CDS |
GGAGGCGGCTATCAGAATTC+AGG | 0.346447 | 2_3:-1488853 | Msa0270200:CDS |
AATCATCAACCTTTATGTTT+GGG | 0.349179 | 2_3:+1491485 | None:intergenic |
GATTATGCCGCTGCAGCTGC+TGG | 0.352272 | 2_3:-1489033 | Msa0270200:CDS |
CCGGGATTTAGTACCTGTTC+TGG | 0.353112 | 2_3:+1490671 | None:intergenic |
TCTATTGGCTGTATTGTTGT+TGG | 0.355511 | 2_3:+1492410 | None:intergenic |
GGTGGTAGTGGAACGTCTTC+AGG | 0.355830 | 2_3:-1489009 | Msa0270200:CDS |
TAGCAAGAAAGACAGGCTTT+TGG | 0.359604 | 2_3:-1491800 | Msa0270200:CDS |
TACCCGCATGGTTAGCCTTA+GGG | 0.360330 | 2_3:-1488782 | Msa0270200:CDS |
ACTCTCAAGGGTGCAGGCTT+TGG | 0.361470 | 2_3:-1489169 | Msa0270200:CDS |
ATTTCAGATGAAATTTCTTT+GGG | 0.372007 | 2_3:-1488662 | Msa0270200:three_prime_UTR |
ATGATGAAGAGAAGGTAAAT+AGG | 0.373547 | 2_3:+1489340 | None:intergenic |
CAATGCTTTCAAGATATTCC+TGG | 0.380146 | 2_3:+1491263 | None:intergenic |
AGATTTATATGCATATGATA+TGG | 0.383704 | 2_3:+1489687 | None:intergenic |
ATGACCGTAGAGGGAGATAA+TGG | 0.387791 | 2_3:-1491142 | Msa0270200:CDS |
GGCGCGGAAACCCACCTTCC+CGG | 0.387923 | 2_3:-1491044 | Msa0270200:CDS |
GCAAGCTGGGATCAGCCAAC+TGG | 0.390557 | 2_3:-1489216 | Msa0270200:CDS |
TCCGGCTTCCTGAGCTGATC+AGG | 0.393176 | 2_3:+1491907 | None:intergenic |
AGATTTCAAAGCTTCTTCTA+AGG | 0.393340 | 2_3:-1491239 | Msa0270200:CDS |
CTATTGGCTGTATTGTTGTT+GGG | 0.393873 | 2_3:+1492411 | None:intergenic |
GCCTTGCCTTGTTTGAGAAT+AGG | 0.394600 | 2_3:+1488966 | None:intergenic |
CTACCCGCATGGTTAGCCTT+AGG | 0.397357 | 2_3:-1488783 | Msa0270200:CDS |
GCCAGGGGCAGGAAGGGAAC+TGG | 0.399839 | 2_3:-1491703 | Msa0270200:CDS |
TGATGATGGCGATGCTCCTT+GGG | 0.400541 | 2_3:-1491833 | Msa0270200:CDS |
GCTCAGTTTGATGTTAATCC+AGG | 0.401276 | 2_3:-1491589 | Msa0270200:CDS |
TCGAAGCCATTGGTTTAGTC+TGG | 0.401988 | 2_3:+1492656 | None:intergenic |
AGAGCCTTGATGTAAAGATT+AGG | 0.402756 | 2_3:+1492162 | None:intergenic |
GTGATGATGGCGATGCTCCT+TGG | 0.404468 | 2_3:-1491834 | Msa0270200:CDS |
GCTTGAAGATTTCCTTGCTC+AGG | 0.408980 | 2_3:-1492133 | Msa0270200:CDS |
CCGGTCCTCCTGAAACTGTC+AGG | 0.411793 | 2_3:-1489521 | Msa0270200:CDS |
ATGTAAGATGCACTGATTCC+AGG | 0.412950 | 2_3:+1489658 | None:intergenic |
GAGCCTTGATGTAAAGATTA+GGG | 0.415850 | 2_3:+1492163 | None:intergenic |
ATGACGGACCCATTCATGTC+TGG | 0.416244 | 2_3:-1491420 | Msa0270200:CDS |
GCCGCTGCAGCTGCTGGTGG+TGG | 0.418701 | 2_3:-1489027 | Msa0270200:CDS |
GTTTCCGCGCCACAAGTTCC+GGG | 0.419096 | 2_3:+1491056 | None:intergenic |
TTAAGTGCATAATAATAAAC+TGG | 0.419627 | 2_3:+1488697 | None:intergenic |
TAGATAATTTCTCAGTCAAC+TGG | 0.421894 | 2_3:+1489142 | None:intergenic |
TGATACTAACACATCCATTA+AGG | 0.425287 | 2_3:+1491009 | None:intergenic |
GCAGCTGCTGGTGGTGGTAG+TGG | 0.425549 | 2_3:-1489021 | Msa0270200:CDS |
AATGAGTTCAACCCTCTTCA+AGG | 0.428889 | 2_3:+1491213 | None:intergenic |
ACTGTCATCAACAACGGGTT+TGG | 0.429963 | 2_3:+1492377 | None:intergenic |
AACAGGGCTATGTCACAGTT+AGG | 0.435704 | 2_3:-1490821 | Msa0270200:CDS |
TTGAAGGCTTTGGCATTGCT+GGG | 0.436119 | 2_3:+1492075 | None:intergenic |
GAAACTTGTGCCAAAATCTC+TGG | 0.436609 | 2_3:+1488461 | None:intergenic |
CGTGCAGCACCCAAACATAA+AGG | 0.438376 | 2_3:-1491494 | Msa0270200:CDS |
TGCCCATCTCTTCGCCTTGG+AGG | 0.438441 | 2_3:+1489057 | None:intergenic |
TCAAAGAGATTCTGGAAGCC+AGG | 0.439840 | 2_3:-1491720 | Msa0270200:CDS |
GCATATAAATCTTGAGCTCC+TGG | 0.445116 | 2_3:-1489676 | Msa0270200:CDS |
GGCATATGCCCACTGAGGCC+TGG | 0.449256 | 2_3:+1491571 | None:intergenic |
ATGAGGAGCTTCATGCAAGC+TGG | 0.457408 | 2_3:-1489230 | Msa0270200:CDS |
TTCAGTCAAGCTGGTGGGAG+TGG | 0.458684 | 2_3:-1488904 | Msa0270200:CDS |
CAGAACAAACATTGGGAGCT+GGG | 0.459982 | 2_3:+1488611 | None:intergenic |
ATGAGAATGAAACTAAGAAA+GGG | 0.464510 | 2_3:-1491450 | Msa0270200:CDS |
TCAGAATCCGACACGGGCTC+CGG | 0.466090 | 2_3:+1491889 | None:intergenic |
AATTATCTTTCAGGAAAGGT+TGG | 0.471050 | 2_3:-1489727 | Msa0270200:intron |
TCAGAAATGTTGAACTCTCA+AGG | 0.471342 | 2_3:-1489182 | Msa0270200:CDS |
TCCTGCCCATCTCTTCGCCT+TGG | 0.472750 | 2_3:+1489054 | None:intergenic |
TCTAGAGGACGGGGAACGAT+TGG | 0.474394 | 2_3:-1488874 | Msa0270200:CDS |
AACTGTCAGGGATCATGTTA+TGG | 0.475362 | 2_3:-1489508 | Msa0270200:CDS |
TCTTACATCTGCTATGCTGC+TGG | 0.477105 | 2_3:-1489643 | Msa0270200:CDS |
TGAACATTGGCTGCCATGTT+GGG | 0.479489 | 2_3:+1489615 | None:intergenic |
TAATAAACTGGTAAAAGAAA+AGG | 0.479905 | 2_3:+1488709 | None:intergenic |
AGCTGCAGTTTCTTCTTCAT+CGG | 0.482972 | 2_3:-1492731 | None:intergenic |
GGGAACTGGAAGGTTTGAAC+AGG | 0.485450 | 2_3:-1491689 | Msa0270200:CDS |
GATTCTGAAACTTCTGAGCT+TGG | 0.486351 | 2_3:-1491874 | Msa0270200:CDS |
TTGTTGGGTTCATCATCAAC+GGG | 0.486651 | 2_3:+1492426 | None:intergenic |
TAAGTTGCCCCAGACATGAA+TGG | 0.490965 | 2_3:+1491411 | None:intergenic |
TCATGAAAAGACTCCAGAAC+AGG | 0.493182 | 2_3:-1490684 | Msa0270200:intron |
GTGAATATGTTGAGAGACTC+AGG | 0.493281 | 2_3:-1491321 | Msa0270200:CDS |
CAGAATTCAGGGAGGACTCA+AGG | 0.493339 | 2_3:-1488841 | Msa0270200:CDS |
GAAGCAAGGTTAGGCGGCGG+TGG | 0.493372 | 2_3:-1489090 | Msa0270200:CDS |
GTTGTTGGGTTCATCATCAA+CGG | 0.494263 | 2_3:+1492425 | None:intergenic |
TCGTCACTGTCATCAACAAC+GGG | 0.495380 | 2_3:+1492372 | None:intergenic |
TGACATTATTGCATCTCTTG+AGG | 0.496021 | 2_3:-1489442 | Msa0270200:CDS |
TCAGAACAAACATTGGGAGC+TGG | 0.496440 | 2_3:+1488610 | None:intergenic |
CATTGGGAGCTGGGAGAGGA+GGG | 0.496780 | 2_3:+1488620 | None:intergenic |
TGACGGACCCATTCATGTCT+GGG | 0.497542 | 2_3:-1491419 | Msa0270200:CDS |
GGAAAAGGATGACGAGGATG+AGG | 0.497694 | 2_3:-1491968 | Msa0270200:CDS |
CTTGGTAATGACAGGCCTCC+TGG | 0.498069 | 2_3:-1491856 | Msa0270200:CDS |
CAGGAATATCTTGAAAGCAT+TGG | 0.498525 | 2_3:-1491262 | Msa0270200:CDS |
TTATTCTGGTGGACGGGTGA+AGG | 0.499453 | 2_3:-1490741 | Msa0270200:CDS |
AAATCAAGGAGGAGGCGCTT+AGG | 0.499787 | 2_3:-1489368 | Msa0270200:CDS |
CATAAATCAGAACAAACATT+GGG | 0.500452 | 2_3:+1488604 | None:intergenic |
ATGAACATTGGCTGCCATGT+TGG | 0.505127 | 2_3:+1489614 | None:intergenic |
CTGGAAGCCAGGGGCAGGAA+GGG | 0.505830 | 2_3:-1491709 | Msa0270200:CDS |
TCAACGGGTTCAGTATCGTT+AGG | 0.505992 | 2_3:+1492441 | None:intergenic |
ACATTGGGAGCTGGGAGAGG+AGG | 0.506596 | 2_3:+1488619 | None:intergenic |
ATGTTAATCCAGGCCTCAGT+GGG | 0.508312 | 2_3:-1491579 | Msa0270200:CDS |
ACCCGCATGGTTAGCCTTAG+GGG | 0.508509 | 2_3:-1488781 | Msa0270200:CDS |
CAGAAATGTTGAACTCTCAA+GGG | 0.508616 | 2_3:-1489181 | Msa0270200:CDS |
AGATTCTGGAAGCCAGGGGC+AGG | 0.509743 | 2_3:-1491714 | Msa0270200:CDS |
AGAATTCAGGGAGGACTCAA+GGG | 0.510031 | 2_3:-1488840 | Msa0270200:CDS |
AGAATCTGCAGCTTCTGAGC+AGG | 0.511073 | 2_3:+1491628 | None:intergenic |
ATCCTTCAGCATTTCTAGCA+CGG | 0.511752 | 2_3:+1489392 | None:intergenic |
AAGTTGCCCCAGACATGAAT+GGG | 0.512091 | 2_3:+1491412 | None:intergenic |
GGCAGTGGACGTACAGGATA+CGG | 0.514533 | 2_3:-1488946 | Msa0270200:CDS |
GATGAGAATGAAACTAAGAA+AGG | 0.515170 | 2_3:-1491451 | Msa0270200:CDS |
TCCAAGGCGAAGAGATGGGC+AGG | 0.515359 | 2_3:-1489055 | Msa0270200:CDS |
AAGGTTAGGCGGCGGTGGGT+TGG | 0.516660 | 2_3:-1489085 | Msa0270200:CDS |
ACCTGATCAGCTCAGGAAGC+CGG | 0.516893 | 2_3:-1491908 | Msa0270200:CDS |
TCATTGAACCTGATCAGCTC+AGG | 0.519230 | 2_3:-1491915 | Msa0270200:CDS |
TGCTCCGTTTGTTGTTACCC+CGG | 0.519622 | 2_3:-1491074 | Msa0270200:CDS |
GATCCCTAATCTTTACATCA+AGG | 0.521376 | 2_3:-1492166 | Msa0270200:CDS |
TGGCGGCTATTCTAGAGGAC+GGG | 0.522471 | 2_3:-1488884 | Msa0270200:CDS |
AGGACTTGATTATCAAATGT+AGG | 0.523141 | 2_3:-1492011 | Msa0270200:CDS |
TGTTGAACTCTCAAGGGTGC+AGG | 0.524552 | 2_3:-1489175 | Msa0270200:CDS |
GAGGCGGCTATCAGAATTCA+GGG | 0.525246 | 2_3:-1488852 | Msa0270200:CDS |
CTCAACATATTCACGTGTGT+GGG | 0.525787 | 2_3:+1491330 | None:intergenic |
GTGGGTTGGATCTGCCTCCA+AGG | 0.528953 | 2_3:-1489071 | Msa0270200:CDS |
TCCCCTAAGGCTAACCATGC+GGG | 0.529790 | 2_3:+1488780 | None:intergenic |
TGTTCTTGCACAGAATGTCC+AGG | 0.530188 | 2_3:-1491281 | Msa0270200:CDS |
CTGAACTTTATTCTGGTGGA+CGG | 0.530497 | 2_3:-1490748 | Msa0270200:CDS |
AAAAGCTTAGCAAGAAAGAC+AGG | 0.531266 | 2_3:-1491807 | Msa0270200:CDS |
CTCTCCATTATCTCCCTCTA+CGG | 0.531803 | 2_3:+1491138 | None:intergenic |
GTCCAGAATCTCGAAGCCAT+TGG | 0.533546 | 2_3:+1492646 | None:intergenic |
GGGCTGGTTTCTGAAGCGCA+TGG | 0.535363 | 2_3:-1490779 | Msa0270200:CDS |
CCACCTTCCCGGAAAATAGC+AGG | 0.535658 | 2_3:-1491033 | Msa0270200:CDS |
GACTCATAAGCAACAGATCA+CGG | 0.536368 | 2_3:+1490894 | None:intergenic |
AGAGGACGGGGAACGATTGG+AGG | 0.536414 | 2_3:-1488871 | Msa0270200:CDS |
GACAGGCCTCCTGGTGATGA+TGG | 0.536973 | 2_3:-1491847 | Msa0270200:CDS |
ATGCTATCAAGATCAATGAC+TGG | 0.537887 | 2_3:-1492263 | Msa0270200:CDS |
TGTTGTTACCCCGGAACTTG+TGG | 0.539965 | 2_3:-1491065 | Msa0270200:CDS |
CTGCCTCCAAGGCGAAGAGA+TGG | 0.540348 | 2_3:-1489060 | Msa0270200:CDS |
CAAACATTGGGAGCTGGGAG+AGG | 0.541139 | 2_3:+1488616 | None:intergenic |
TTGTCTGAACTTTATTCTGG+TGG | 0.542410 | 2_3:-1490752 | Msa0270200:CDS |
AGGCAAGGCAGTGGACGTAC+AGG | 0.542622 | 2_3:-1488952 | Msa0270200:CDS |
CAAGCTGGGATCAGCCAACT+GGG | 0.543584 | 2_3:-1489215 | Msa0270200:CDS |
GTGGAACGTCTTCAGGTGGC+AGG | 0.543676 | 2_3:-1489002 | Msa0270200:CDS |
AGTTCCGGGGTAACAACAAA+CGG | 0.544060 | 2_3:+1491070 | None:intergenic |
TGAGGAGCTTCATGCAAGCT+GGG | 0.544437 | 2_3:-1489229 | Msa0270200:CDS |
TAGGGAGAGTCCTGAGAGTG+AGG | 0.545078 | 2_3:-1491992 | Msa0270200:CDS |
AATGCTGAAGGATAAAATCA+AGG | 0.545420 | 2_3:-1489382 | Msa0270200:CDS |
TATGCCGCTGCAGCTGCTGG+TGG | 0.547820 | 2_3:-1489030 | Msa0270200:CDS |
GGACTTGATTATCAAATGTA+GGG | 0.548379 | 2_3:-1492010 | Msa0270200:CDS |
TCCTATTCTCAAACAAGGCA+AGG | 0.549766 | 2_3:-1488967 | Msa0270200:CDS |
CTTCTGAGCTTGGTAATGAC+AGG | 0.550457 | 2_3:-1491864 | Msa0270200:CDS |
CATAAAGGTTGATGATTCTG+TGG | 0.552363 | 2_3:-1491479 | Msa0270200:CDS |
CCATAAATCAGAACAAACAT+TGG | 0.552425 | 2_3:+1488603 | None:intergenic |
AGAATCATATGATGAAGAGA+AGG | 0.556503 | 2_3:+1489332 | None:intergenic |
GAATTTCCGCCGCTTACTTG+AGG | 0.559029 | 2_3:-1489565 | Msa0270200:CDS |
CCTGACAGTTTCAGGAGGAC+CGG | 0.559804 | 2_3:+1489521 | None:intergenic |
CTTCTAAGGTAGCCTTGAAG+AGG | 0.561694 | 2_3:-1491225 | Msa0270200:CDS |
TCTCAAACAAGGCAAGGCAG+TGG | 0.563066 | 2_3:-1488961 | Msa0270200:CDS |
CAAAGAGATTCTGGAAGCCA+GGG | 0.563451 | 2_3:-1491719 | Msa0270200:CDS |
TCTGGAAGCCAGGGGCAGGA+AGG | 0.564829 | 2_3:-1491710 | Msa0270200:CDS |
AAGAGATGCAATAATGTCAA+AGG | 0.567228 | 2_3:+1489446 | None:intergenic |
GCATTATCGTTCAGTCAAGC+TGG | 0.568957 | 2_3:-1488913 | Msa0270200:CDS |
GTGTCCCATGTGATCTCACT+AGG | 0.569429 | 2_3:+1491757 | None:intergenic |
GGACGGGGAACGATTGGAGG+CGG | 0.571631 | 2_3:-1488868 | Msa0270200:CDS |
GGAGCATCGCCATCATCACC+AGG | 0.573601 | 2_3:+1491838 | None:intergenic |
TGCCTCCAAGGCGAAGAGAT+GGG | 0.574902 | 2_3:-1489059 | Msa0270200:CDS |
ACGCTTAGCATCATGAACAT+TGG | 0.575475 | 2_3:+1489602 | None:intergenic |
ATCATGTTATGGCTGCCACA+AGG | 0.575690 | 2_3:-1489497 | Msa0270200:CDS |
GGGAGAGTCCTGAGAGTGAG+GGG | 0.577170 | 2_3:-1491990 | Msa0270200:CDS |
GTATCACTGATATACAAATA+CGG | 0.579558 | 2_3:-1490992 | Msa0270200:CDS |
TTATTGCATCTCTTGAGGTG+TGG | 0.579762 | 2_3:-1489437 | Msa0270200:CDS |
TCTCAACATATTCACGTGTG+TGG | 0.579942 | 2_3:+1491329 | None:intergenic |
TGAACTTTATTCTGGTGGAC+GGG | 0.580196 | 2_3:-1490747 | Msa0270200:CDS |
AGTGAGAAACAAACATTCAC+CGG | 0.580815 | 2_3:-1489540 | Msa0270200:CDS |
CTGAAAATAATGCACCCAGT+TGG | 0.581929 | 2_3:+1489201 | None:intergenic |
CGGTCCTCCTGAAACTGTCA+GGG | 0.584556 | 2_3:-1489520 | Msa0270200:CDS |
AAAAGCCTAGTGAGATCACA+TGG | 0.585381 | 2_3:-1491762 | Msa0270200:CDS |
AGGTTCAATGATCTCATCAT+CGG | 0.587424 | 2_3:+1491927 | None:intergenic |
GTTGCTTCATAAACCTCATG+CGG | 0.588345 | 2_3:+1491181 | None:intergenic |
GCTACAGAAGCAAGGTTAGG+CGG | 0.590150 | 2_3:-1489096 | Msa0270200:CDS |
TGAGAATGAAACTAAGAAAG+GGG | 0.591503 | 2_3:-1491449 | Msa0270200:CDS |
GTCAAGCACGAACTCCCCTA+AGG | 0.592556 | 2_3:+1488767 | None:intergenic |
GGTTCATCATCAATATCAGT+GGG | 0.592619 | 2_3:+1492462 | None:intergenic |
ACCACCACCAGCAGCTGCAG+CGG | 0.592682 | 2_3:+1489026 | None:intergenic |
AGGTTCATCATCAATATCAG+TGG | 0.593036 | 2_3:+1492461 | None:intergenic |
TTCTAAGGTAGCCTTGAAGA+GGG | 0.593307 | 2_3:-1491224 | Msa0270200:CDS |
AGAGCTACAGAAGCAAGGTT+AGG | 0.594295 | 2_3:-1489099 | Msa0270200:CDS |
GTGAAGGAATTGCTTGCGCA+AGG | 0.594439 | 2_3:-1490725 | Msa0270200:CDS |
ACTCATAAGCAACAGATCAC+GGG | 0.595404 | 2_3:+1490895 | None:intergenic |
AGATAATGGAGAGATGAGTG+AGG | 0.595500 | 2_3:-1491128 | Msa0270200:CDS |
AAGCAAGGTTAGGCGGCGGT+GGG | 0.595912 | 2_3:-1489089 | Msa0270200:CDS |
CATTTACTACAAACCGCATG+AGG | 0.596878 | 2_3:-1491194 | Msa0270200:CDS |
TGCTATCAAGATCAATGACT+GGG | 0.597590 | 2_3:-1492262 | Msa0270200:CDS |
AGGAAAGGTTGGAAAGAAGA+CGG | 0.598493 | 2_3:-1489716 | Msa0270200:CDS |
GGGAGTGGCGGCTATTCTAG+AGG | 0.598572 | 2_3:-1488889 | Msa0270200:CDS |
TTTCCGCGCCACAAGTTCCG+GGG | 0.599206 | 2_3:+1491057 | None:intergenic |
AGGGAGAGTCCTGAGAGTGA+GGG | 0.600175 | 2_3:-1491991 | Msa0270200:CDS |
TTGGCTGAGATGACCGTAGA+GGG | 0.603596 | 2_3:-1491151 | Msa0270200:CDS |
ATGAAAGAGCTACAGAAGCA+AGG | 0.604351 | 2_3:-1489104 | Msa0270200:CDS |
AGTCAAGCTGGTGGGAGTGG+CGG | 0.604909 | 2_3:-1488901 | Msa0270200:CDS |
GAAGGATAAAATCAAGGAGG+AGG | 0.606776 | 2_3:-1489376 | Msa0270200:CDS |
GTGGCGGCTATTCTAGAGGA+CGG | 0.606807 | 2_3:-1488885 | Msa0270200:CDS |
CAGGAAGCCGGAGCCCGTGT+CGG | 0.608070 | 2_3:-1491896 | Msa0270200:CDS |
CGTAGATACTTCTACCCGCA+TGG | 0.610484 | 2_3:-1488794 | Msa0270200:CDS |
GAATTCAGGGAGGACTCAAG+GGG | 0.615559 | 2_3:-1488839 | Msa0270200:CDS |
GACAGTGACGACGACGATGA+TGG | 0.616344 | 2_3:-1492360 | Msa0270200:CDS |
GGCGGCTATTCTAGAGGACG+GGG | 0.620265 | 2_3:-1488883 | Msa0270200:CDS |
ACTTGTCCTATTCTCAAACA+AGG | 0.620485 | 2_3:-1488972 | Msa0270200:CDS |
CTTCGTGTTAGTTTGTTGTG+TGG | 0.622006 | 2_3:-1488517 | Msa0270200:three_prime_UTR |
ACAGAAGCAAGGTTAGGCGG+CGG | 0.622574 | 2_3:-1489093 | Msa0270200:CDS |
TAACAACCAGACTAAACCAA+TGG | 0.622757 | 2_3:-1492662 | Msa0270200:exon |
TCCATTAATAAGAACCCTTG+TGG | 0.625098 | 2_3:+1489482 | None:intergenic |
TATTAGCAGAAGCCTGAGCA+AGG | 0.625753 | 2_3:+1492121 | None:intergenic |
TCATGTTATGGCTGCCACAA+GGG | 0.627218 | 2_3:-1489496 | Msa0270200:CDS |
CACTGACCTCAAGTAAGCGG+CGG | 0.627273 | 2_3:+1489559 | None:intergenic |
GTCGTCACTGTCATCAACAA+CGG | 0.633735 | 2_3:+1492371 | None:intergenic |
TATCGTTCAGTCAAGCTGGT+GGG | 0.636549 | 2_3:-1488909 | Msa0270200:CDS |
GGACGTACAGGATACGGTGG+AGG | 0.637438 | 2_3:-1488940 | Msa0270200:CDS |
GAACGTCTTCAGGTGGCAGG+TGG | 0.637601 | 2_3:-1488999 | Msa0270200:CDS |
TTATCGTTCAGTCAAGCTGG+TGG | 0.641328 | 2_3:-1488910 | Msa0270200:CDS |
AAGAAAGGGGATGACTATGA+CGG | 0.642172 | 2_3:-1491436 | Msa0270200:CDS |
GTGTTCATAGTATTGTCAGT+AGG | 0.642718 | 2_3:-1489263 | Msa0270200:CDS |
TCAACATATTCACGTGTGTG+GGG | 0.645878 | 2_3:+1491331 | None:intergenic |
CACCGTGCTAGAAATGCTGA+AGG | 0.646843 | 2_3:-1489394 | Msa0270200:CDS |
GGCTTCGAGATTCTGGACAC+AGG | 0.648433 | 2_3:-1492641 | Msa0270200:intron |
GAAGTTTCAGAATCCGACAC+GGG | 0.650738 | 2_3:+1491883 | None:intergenic |
TATTAATGGAGATTTCCAGA+AGG | 0.655339 | 2_3:-1489469 | Msa0270200:CDS |
AAAATGCGTGCAGAATATGC+TGG | 0.655482 | 2_3:-1491533 | Msa0270200:CDS |
GGGGCAGGAAGGGAACTGGA+AGG | 0.655940 | 2_3:-1491699 | Msa0270200:CDS |
GCAAGAAAATGTTCACCACA+TGG | 0.657602 | 2_3:-1490867 | Msa0270200:CDS |
GGTAGTGGAACGTCTTCAGG+TGG | 0.658306 | 2_3:-1489006 | Msa0270200:CDS |
TCTCACTGACCTCAAGTAAG+CGG | 0.659845 | 2_3:+1489556 | None:intergenic |
CTCCCCTAAGGCTAACCATG+CGG | 0.664230 | 2_3:+1488779 | None:intergenic |
TTACCCCGGAACTTGTGGCG+CGG | 0.666773 | 2_3:-1491060 | Msa0270200:CDS |
CAAACTCATCAAGAAGAGCA+TGG | 0.667504 | 2_3:+1490924 | None:intergenic |
GATGTTAATCCAGGCCTCAG+TGG | 0.669943 | 2_3:-1491580 | Msa0270200:CDS |
CAGTAGGATGATGATCAATG+AGG | 0.670922 | 2_3:-1489247 | Msa0270200:CDS |
GCTGCTGGAAGTTCCCAACA+TGG | 0.671778 | 2_3:-1489628 | Msa0270200:CDS |
GGAGAGTCCTGAGAGTGAGG+GGG | 0.672377 | 2_3:-1491989 | Msa0270200:CDS |
TGTGCAAGAACAACAAACTG+AGG | 0.676475 | 2_3:+1491292 | None:intergenic |
GGCATATGCCCATAAATGTG+TGG | 0.678845 | 2_3:-1491558 | Msa0270200:CDS |
GACGGACCCATTCATGTCTG+GGG | 0.680909 | 2_3:-1491418 | Msa0270200:CDS |
TGAATATGTTGAGAGACTCA+GGG | 0.682868 | 2_3:-1491320 | Msa0270200:CDS |
AGAAGTTTCAGAATCCGACA+CGG | 0.685846 | 2_3:+1491882 | None:intergenic |
ATTGGCTGAGATGACCGTAG+AGG | 0.686209 | 2_3:-1491152 | Msa0270200:CDS |
CTGACAATACTATGAACACG+AGG | 0.689117 | 2_3:+1489267 | None:intergenic |
ATTCTTGATCTGATCAACAG+TGG | 0.701566 | 2_3:+1492284 | None:intergenic |
AAAGAGATTCTGGAAGCCAG+GGG | 0.701656 | 2_3:-1491718 | Msa0270200:CDS |
GCATCGCCATCATCACCAGG+AGG | 0.707685 | 2_3:+1491841 | None:intergenic |
TGCGGGTAGAAGTATCTACG+TGG | 0.710114 | 2_3:+1488797 | None:intergenic |
TGATCCCTGACAGTTTCAGG+AGG | 0.717851 | 2_3:+1489516 | None:intergenic |
GCGGGTAGAAGTATCTACGT+GGG | 0.720335 | 2_3:+1488798 | None:intergenic |
AATTCAGGGAGGACTCAAGG+GGG | 0.722566 | 2_3:-1488838 | Msa0270200:CDS |
GCTGAAGGATAAAATCAAGG+AGG | 0.734791 | 2_3:-1489379 | Msa0270200:CDS |
AAAGCCTAGTGAGATCACAT+GGG | 0.747188 | 2_3:-1491761 | Msa0270200:CDS |
GAAGAACAATAAGCAATACG+AGG | 0.757858 | 2_3:-1492031 | Msa0270200:CDS |
AGTGGACGTACAGGATACGG+TGG | 0.758461 | 2_3:-1488943 | Msa0270200:CDS |
TTATGGGCATATGCCCACTG+AGG | 0.770132 | 2_3:+1491566 | None:intergenic |
GCGGCTATCAGAATTCAGGG+AGG | 0.799750 | 2_3:-1488849 | Msa0270200:CDS |
TTTGTGTCGAAATGTCCATG+TGG | 0.823137 | 2_3:+1490852 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAGAAATAGAAAAAATAAA+AGG | - | chr2_3:1490699-1490718 | Msa0270200:CDS | 10.0% |
!! | CAGAAATTAAATTTGATTAT+TGG | - | chr2_3:1490828-1490847 | Msa0270200:CDS | 15.0% |
!!! | TATTTTCCTTTAATTTTCTA+TGG | + | chr2_3:1491009-1491028 | None:intergenic | 15.0% |
!!! | TAAATTTTTTTGAATTGAGT+GGG | + | chr2_3:1491080-1491099 | None:intergenic | 15.0% |
!!! | ATAAATTTTTTTGAATTGAG+TGG | + | chr2_3:1491081-1491100 | None:intergenic | 15.0% |
!!! | AAAAAATTTATTTTTGCCAT+TGG | - | chr2_3:1491090-1491109 | Msa0270200:CDS | 15.0% |
!!! | TTGTTAATTTTTTTTCTTGA+GGG | - | chr2_3:1492650-1492669 | Msa0270200:exon | 15.0% |
!! | ATCTATTTGAAAAAAATAGC+CGG | + | chr2_3:1490544-1490563 | None:intergenic | 20.0% |
!! | TGTCAATGTAAAGATAAATA+AGG | + | chr2_3:1490748-1490767 | None:intergenic | 20.0% |
!! | TATAATATTATTGCTCAACT+TGG | - | chr2_3:1490795-1490814 | Msa0270200:CDS | 20.0% |
!!! | TGTTTTTGTTTTTGTTTCTA+AGG | - | chr2_3:1490891-1490910 | Msa0270200:CDS | 20.0% |
!!! | TTTTATTTTCATCTTGTTAC+TGG | - | chr2_3:1490925-1490944 | Msa0270200:CDS | 20.0% |
!!! | TTTATTTTCATCTTGTTACT+GGG | - | chr2_3:1490926-1490945 | Msa0270200:CDS | 20.0% |
!! | TATAAGCCATAGAAAATTAA+AGG | - | chr2_3:1491000-1491019 | Msa0270200:CDS | 20.0% |
!!! | AAATTTTTTTGAATTGAGTG+GGG | + | chr2_3:1491079-1491098 | None:intergenic | 20.0% |
!! | CTATTCTTTAATTATCTTTC+AGG | - | chr2_3:1491457-1491476 | Msa0270200:CDS | 20.0% |
!! | AGATTTATATGCATATGATA+TGG | + | chr2_3:1491509-1491528 | None:intergenic | 20.0% |
!! | TAATAAACTGGTAAAAGAAA+AGG | + | chr2_3:1492487-1492506 | None:intergenic | 20.0% |
!! | TTAAGTGCATAATAATAAAC+TGG | + | chr2_3:1492499-1492518 | None:intergenic | 20.0% |
!! | ATTTCAGATGAAATTTCTTT+GGG | - | chr2_3:1492531-1492550 | Msa0270200:intron | 20.0% |
!!! | CTTGTTAATTTTTTTTCTTG+AGG | - | chr2_3:1492649-1492668 | Msa0270200:exon | 20.0% |
!!! | TGTTAATTTTTTTTCTTGAG+GGG | - | chr2_3:1492651-1492670 | Msa0270200:exon | 20.0% |
!!! | CATTTTTTCCACACATTTAT+GGG | + | chr2_3:1489646-1489665 | None:intergenic | 25.0% |
! | AATCATCAACCTTTATGTTT+GGG | + | chr2_3:1489711-1489730 | None:intergenic | 25.0% |
! | ATGAGAATGAAACTAAGAAA+GGG | - | chr2_3:1489743-1489762 | Msa0270200:intron | 25.0% |
! | GTATCACTGATATACAAATA+CGG | - | chr2_3:1490201-1490220 | Msa0270200:intron | 25.0% |
!!! | GACACAAATACTTTTTAACA+GGG | - | chr2_3:1490356-1490375 | Msa0270200:intron | 25.0% |
! | TCTATTTGAAAAAAATAGCC+GGG | + | chr2_3:1490543-1490562 | None:intergenic | 25.0% |
!! | CTTTATTAATGTACTTGTTG+TGG | - | chr2_3:1490578-1490597 | Msa0270200:intron | 25.0% |
! | AGAAAAAATAAAAGGTGATC+TGG | - | chr2_3:1490707-1490726 | Msa0270200:CDS | 25.0% |
!! | TTATTTTCATCTTGTTACTG+GGG | - | chr2_3:1490927-1490946 | Msa0270200:CDS | 25.0% |
! | TTTCTATGGCTTATACAATA+GGG | + | chr2_3:1490995-1491014 | None:intergenic | 25.0% |
!! | TTTTCTATGGCTTATACAAT+AGG | + | chr2_3:1490996-1491015 | None:intergenic | 25.0% |
! | TTTCAGTTATGCTAAAAGTA+AGG | + | chr2_3:1491142-1491161 | None:intergenic | 25.0% |
!! | TAATCGTAATCCGAAATTTT+GGG | + | chr2_3:1491304-1491323 | None:intergenic | 25.0% |
!! | ATAATCGTAATCCGAAATTT+TGG | + | chr2_3:1491305-1491324 | None:intergenic | 25.0% |
!! | CATACTTCATATTGGATTTT+TGG | - | chr2_3:1491358-1491377 | Msa0270200:CDS | 25.0% |
! | CTTTAATTATCTTTCAGGAA+AGG | - | chr2_3:1491462-1491481 | Msa0270200:CDS | 25.0% |
! | ATCATATGATTCTTTCAGTT+TGG | - | chr2_3:1491871-1491890 | Msa0270200:CDS | 25.0% |
! | GATTTCAGATGAAATTTCTT+TGG | - | chr2_3:1492530-1492549 | Msa0270200:intron | 25.0% |
! | CATAAATCAGAACAAACATT+GGG | + | chr2_3:1492592-1492611 | None:intergenic | 25.0% |
CTGGTTGTTATGAGAATTTA+GGG | + | chr2_3:1488521-1488540 | None:intergenic | 30.0% | |
TCTGGTTGTTATGAGAATTT+AGG | + | chr2_3:1488522-1488541 | None:intergenic | 30.0% | |
!! | TTTGGTTTGTAGGTATCTAT+TGG | + | chr2_3:1488801-1488820 | None:intergenic | 30.0% |
! | GTAAAGATTAGGGATCTTTT+GGG | + | chr2_3:1489023-1489042 | None:intergenic | 30.0% |
! | TGTAAAGATTAGGGATCTTT+TGG | + | chr2_3:1489024-1489043 | None:intergenic | 30.0% |
!!! | TTTTTGCTTCATTGAGTTGA+AGG | + | chr2_3:1489137-1489156 | None:intergenic | 30.0% |
AGGACTTGATTATCAAATGT+AGG | - | chr2_3:1489182-1489201 | Msa0270200:CDS | 30.0% | |
GGACTTGATTATCAAATGTA+GGG | - | chr2_3:1489183-1489202 | Msa0270200:CDS | 30.0% | |
! | TTTAGCAACTTTTGTTAGGA+AGG | + | chr2_3:1489542-1489561 | None:intergenic | 30.0% |
!!! | GTGTTTTAGCAACTTTTGTT+AGG | + | chr2_3:1489546-1489565 | None:intergenic | 30.0% |
!!! | GCATTTTTTCCACACATTTA+TGG | + | chr2_3:1489647-1489666 | None:intergenic | 30.0% |
GAATCATCAACCTTTATGTT+TGG | + | chr2_3:1489712-1489731 | None:intergenic | 30.0% | |
GATGAGAATGAAACTAAGAA+AGG | - | chr2_3:1489742-1489761 | Msa0270200:intron | 30.0% | |
TGAGAATGAAACTAAGAAAG+GGG | - | chr2_3:1489744-1489763 | Msa0270200:intron | 30.0% | |
AGATTTCAAAGCTTCTTCTA+AGG | - | chr2_3:1489954-1489973 | Msa0270200:intron | 30.0% | |
TTATGAAGCAACGAGAAAAT+TGG | - | chr2_3:1490023-1490042 | Msa0270200:intron | 30.0% | |
TGATACTAACACATCCATTA+AGG | + | chr2_3:1490187-1490206 | None:intergenic | 30.0% | |
!! | CGACACAAATACTTTTTAAC+AGG | - | chr2_3:1490355-1490374 | Msa0270200:intron | 30.0% |
TGTTTGTCTGAACTTTATTC+TGG | - | chr2_3:1490438-1490457 | Msa0270200:intron | 30.0% | |
ATCTTTACATTGACATTGAG+TGG | - | chr2_3:1490753-1490772 | Msa0270200:CDS | 30.0% | |
TCTTTACATTGACATTGAGT+GGG | - | chr2_3:1490754-1490773 | Msa0270200:CDS | 30.0% | |
! | TATTTTCATCTTGTTACTGG+GGG | - | chr2_3:1490928-1490947 | Msa0270200:CDS | 30.0% |
!! | TATTTTTGCCATTGGTAGTT+CGG | - | chr2_3:1491098-1491117 | Msa0270200:CDS | 30.0% |
TAGCATAACTGAAATTGATG+AGG | - | chr2_3:1491148-1491167 | Msa0270200:CDS | 30.0% | |
AGCATAACTGAAATTGATGA+GGG | - | chr2_3:1491149-1491168 | Msa0270200:CDS | 30.0% | |
ATGTTCAAACCCCAAAATTT+CGG | - | chr2_3:1491291-1491310 | Msa0270200:CDS | 30.0% | |
! | AATCGTAATCCGAAATTTTG+GGG | + | chr2_3:1491303-1491322 | None:intergenic | 30.0% |
GTGAATACCACAAACAATAA+AGG | - | chr2_3:1491333-1491352 | Msa0270200:CDS | 30.0% | |
TAAAGGCTCATACTTCATAT+TGG | - | chr2_3:1491350-1491369 | Msa0270200:CDS | 30.0% | |
!! | GGATTTTTGGAAATCCTAAT+CGG | - | chr2_3:1491371-1491390 | Msa0270200:CDS | 30.0% |
AATTATCTTTCAGGAAAGGT+TGG | - | chr2_3:1491466-1491485 | Msa0270200:CDS | 30.0% | |
TATTAATGGAGATTTCCAGA+AGG | - | chr2_3:1491724-1491743 | Msa0270200:CDS | 30.0% | |
AAGAGATGCAATAATGTCAA+AGG | + | chr2_3:1491750-1491769 | None:intergenic | 30.0% | |
AATGCTGAAGGATAAAATCA+AGG | - | chr2_3:1491811-1491830 | Msa0270200:CDS | 30.0% | |
ATGATGAAGAGAAGGTAAAT+AGG | + | chr2_3:1491856-1491875 | None:intergenic | 30.0% | |
AGAATCATATGATGAAGAGA+AGG | + | chr2_3:1491864-1491883 | None:intergenic | 30.0% | |
TAGATAATTTCTCAGTCAAC+TGG | + | chr2_3:1492054-1492073 | None:intergenic | 30.0% | |
TATGCACTTAATCTAGATTC+TGG | - | chr2_3:1492508-1492527 | Msa0270200:intron | 30.0% | |
CCATAAATCAGAACAAACAT+TGG | + | chr2_3:1492593-1492612 | None:intergenic | 30.0% | |
CCAATGTTTGTTCTGATTTA+TGG | - | chr2_3:1492590-1492609 | Msa0270200:intron | 30.0% | |
TAACAACCAGACTAAACCAA+TGG | - | chr2_3:1488531-1488550 | Msa0270200:three_prime_UTR | 35.0% | |
TGAATAAACACAGAGAGAGA+CGG | + | chr2_3:1488629-1488648 | None:intergenic | 35.0% | |
GGTTCATCATCAATATCAGT+GGG | + | chr2_3:1488734-1488753 | None:intergenic | 35.0% | |
AGGTTCATCATCAATATCAG+TGG | + | chr2_3:1488735-1488754 | None:intergenic | 35.0% | |
! | CTATTGGCTGTATTGTTGTT+GGG | + | chr2_3:1488785-1488804 | None:intergenic | 35.0% |
! | TCTATTGGCTGTATTGTTGT+TGG | + | chr2_3:1488786-1488805 | None:intergenic | 35.0% |
! | CAGATTTAACAACACGCTTT+TGG | + | chr2_3:1488859-1488878 | None:intergenic | 35.0% |
!! | AGATAAGCGTTTTGATGAGA+TGG | - | chr2_3:1488883-1488902 | Msa0270200:CDS | 35.0% |
ATTCTTGATCTGATCAACAG+TGG | + | chr2_3:1488912-1488931 | None:intergenic | 35.0% | |
ATGCTATCAAGATCAATGAC+TGG | - | chr2_3:1488930-1488949 | Msa0270200:CDS | 35.0% | |
TGCTATCAAGATCAATGACT+GGG | - | chr2_3:1488931-1488950 | Msa0270200:CDS | 35.0% | |
GATCCCTAATCTTTACATCA+AGG | - | chr2_3:1489027-1489046 | Msa0270200:CDS | 35.0% | |
GAGCCTTGATGTAAAGATTA+GGG | + | chr2_3:1489033-1489052 | None:intergenic | 35.0% | |
AGAGCCTTGATGTAAAGATT+AGG | + | chr2_3:1489034-1489053 | None:intergenic | 35.0% | |
GAAGAACAATAAGCAATACG+AGG | - | chr2_3:1489162-1489181 | Msa0270200:CDS | 35.0% | |
AGGTTCAATGATCTCATCAT+CGG | + | chr2_3:1489269-1489288 | None:intergenic | 35.0% | |
AAAAGCTTAGCAAGAAAGAC+AGG | - | chr2_3:1489386-1489405 | Msa0270200:CDS | 35.0% | |
CAAGAAGTTCAAAGAGATTC+TGG | - | chr2_3:1489465-1489484 | Msa0270200:CDS | 35.0% | |
!! | CATAAAGGTTGATGATTCTG+TGG | - | chr2_3:1489714-1489733 | Msa0270200:CDS | 35.0% |
TGAATATGTTGAGAGACTCA+GGG | - | chr2_3:1489873-1489892 | Msa0270200:intron | 35.0% | |
CAATGCTTTCAAGATATTCC+TGG | + | chr2_3:1489933-1489952 | None:intergenic | 35.0% | |
! | CAGGAATATCTTGAAAGCAT+TGG | - | chr2_3:1489931-1489950 | Msa0270200:intron | 35.0% |
! | TGAGGAGTTAAAAGGTTTTG+AGG | - | chr2_3:1490083-1490102 | Msa0270200:intron | 35.0% |
!!! | ATTAAGGTCCTGCTATTTTC+CGG | + | chr2_3:1490171-1490190 | None:intergenic | 35.0% |
! | AGTTAGGTCTATGTGCTTTT+CGG | - | chr2_3:1490388-1490407 | Msa0270200:intron | 35.0% |
TTGTCTGAACTTTATTCTGG+TGG | - | chr2_3:1490441-1490460 | Msa0270200:intron | 35.0% | |
! | CTGGAGTCTTTTCATGATAA+CGG | + | chr2_3:1490506-1490525 | None:intergenic | 35.0% |
CAAATAGATGTCTCATAGCA+TGG | - | chr2_3:1490555-1490574 | Msa0270200:intron | 35.0% | |
ATCAGATACAATGTAAGCAC+CGG | + | chr2_3:1490615-1490634 | None:intergenic | 35.0% | |
!! | TTTCTTTAGAGCAGTGACAT+TGG | + | chr2_3:1490663-1490682 | None:intergenic | 35.0% |
CTTTACATTGACATTGAGTG+GGG | - | chr2_3:1490755-1490774 | Msa0270200:CDS | 35.0% | |
! | GTGGGGATTAATCAATTTTG+AGG | - | chr2_3:1490772-1490791 | Msa0270200:CDS | 35.0% |
TGTTAAACTCATAGAGCATG+AGG | - | chr2_3:1491033-1491052 | Msa0270200:CDS | 35.0% | |
GTTAAACTCATAGAGCATGA+GGG | - | chr2_3:1491034-1491053 | Msa0270200:CDS | 35.0% | |
TTAAACTCATAGAGCATGAG+GGG | - | chr2_3:1491035-1491054 | Msa0270200:CDS | 35.0% | |
AAAAGTAAGGCACACTTTGT+TGG | + | chr2_3:1491129-1491148 | None:intergenic | 35.0% | |
! | CATGCTCTTATTTCACTACA+TGG | + | chr2_3:1491199-1491218 | None:intergenic | 35.0% |
! | TCACAGAAAGTTTTCTGTCT+TGG | - | chr2_3:1491267-1491286 | Msa0270200:CDS | 35.0% |
GTATGAGCCTTTATTGTTTG+TGG | + | chr2_3:1491343-1491362 | None:intergenic | 35.0% | |
! | TTTGCCGTATTTCTATCTAC+CGG | - | chr2_3:1491399-1491418 | Msa0270200:CDS | 35.0% |
AGTGAGAAACAAACATTCAC+CGG | - | chr2_3:1491653-1491672 | Msa0270200:CDS | 35.0% | |
TCCATTAATAAGAACCCTTG+TGG | + | chr2_3:1491714-1491733 | None:intergenic | 35.0% | |
TGACATTATTGCATCTCTTG+AGG | - | chr2_3:1491751-1491770 | Msa0270200:CDS | 35.0% | |
GTGTTCATAGTATTGTCAGT+AGG | - | chr2_3:1491930-1491949 | Msa0270200:CDS | 35.0% | |
TCAGAAATGTTGAACTCTCA+AGG | - | chr2_3:1492011-1492030 | Msa0270200:CDS | 35.0% | |
CAGAAATGTTGAACTCTCAA+GGG | - | chr2_3:1492012-1492031 | Msa0270200:CDS | 35.0% | |
ACTTGTCCTATTCTCAAACA+AGG | - | chr2_3:1492221-1492240 | Msa0270200:CDS | 35.0% | |
TTGTTGGGTTCATCATCAAC+GGG | + | chr2_3:1488770-1488789 | None:intergenic | 40.0% | |
GTTGTTGGGTTCATCATCAA+CGG | + | chr2_3:1488771-1488790 | None:intergenic | 40.0% | |
!! | CTTCATTGAGTTGAAGGCTT+TGG | + | chr2_3:1489131-1489150 | None:intergenic | 40.0% |
AGAAGTTTCAGAATCCGACA+CGG | + | chr2_3:1489314-1489333 | None:intergenic | 40.0% | |
!! | GATTCTGAAACTTCTGAGCT+TGG | - | chr2_3:1489319-1489338 | Msa0270200:CDS | 40.0% |
! | TTGCTAAGCTTTTGATCCCA+AGG | + | chr2_3:1489379-1489398 | None:intergenic | 40.0% |
! | TAGCAAGAAAGACAGGCTTT+TGG | - | chr2_3:1489393-1489412 | Msa0270200:CDS | 40.0% |
AAAAGCCTAGTGAGATCACA+TGG | - | chr2_3:1489431-1489450 | Msa0270200:CDS | 40.0% | |
AAAGCCTAGTGAGATCACAT+GGG | - | chr2_3:1489432-1489451 | Msa0270200:CDS | 40.0% | |
GCTCAGTTTGATGTTAATCC+AGG | - | chr2_3:1489604-1489623 | Msa0270200:CDS | 40.0% | |
AAAATGCGTGCAGAATATGC+TGG | - | chr2_3:1489660-1489679 | Msa0270200:CDS | 40.0% | |
AAGAAAGGGGATGACTATGA+CGG | - | chr2_3:1489757-1489776 | Msa0270200:intron | 40.0% | |
CTGCAAGCTCTTGAAAAACT+CGG | + | chr2_3:1489833-1489852 | None:intergenic | 40.0% | |
TCAACATATTCACGTGTGTG+GGG | + | chr2_3:1489865-1489884 | None:intergenic | 40.0% | |
CTCAACATATTCACGTGTGT+GGG | + | chr2_3:1489866-1489885 | None:intergenic | 40.0% | |
TCTCAACATATTCACGTGTG+TGG | + | chr2_3:1489867-1489886 | None:intergenic | 40.0% | |
GTGAATATGTTGAGAGACTC+AGG | - | chr2_3:1489872-1489891 | Msa0270200:intron | 40.0% | |
TGTGCAAGAACAACAAACTG+AGG | + | chr2_3:1489904-1489923 | None:intergenic | 40.0% | |
!! | TTCTAAGGTAGCCTTGAAGA+GGG | - | chr2_3:1489969-1489988 | Msa0270200:intron | 40.0% |
AATGAGTTCAACCCTCTTCA+AGG | + | chr2_3:1489983-1490002 | None:intergenic | 40.0% | |
CATTTACTACAAACCGCATG+AGG | - | chr2_3:1489999-1490018 | Msa0270200:intron | 40.0% | |
GTTGCTTCATAAACCTCATG+CGG | + | chr2_3:1490015-1490034 | None:intergenic | 40.0% | |
!! | AGATAATGGAGAGATGAGTG+AGG | - | chr2_3:1490065-1490084 | Msa0270200:intron | 40.0% |
GAGATGAGTGAGGAGTTAAA+AGG | - | chr2_3:1490075-1490094 | Msa0270200:intron | 40.0% | |
!!! | TTAAGGTCCTGCTATTTTCC+GGG | + | chr2_3:1490170-1490189 | None:intergenic | 40.0% |
GGAAAATAGCAGGACCTTAA+TGG | - | chr2_3:1490170-1490189 | Msa0270200:intron | 40.0% | |
CAAACTCATCAAGAAGAGCA+TGG | + | chr2_3:1490272-1490291 | None:intergenic | 40.0% | |
ACTCATAAGCAACAGATCAC+GGG | + | chr2_3:1490301-1490320 | None:intergenic | 40.0% | |
GACTCATAAGCAACAGATCA+CGG | + | chr2_3:1490302-1490321 | None:intergenic | 40.0% | |
GCAAGAAAATGTTCACCACA+TGG | - | chr2_3:1490326-1490345 | Msa0270200:intron | 40.0% | |
TTTGTGTCGAAATGTCCATG+TGG | + | chr2_3:1490344-1490363 | None:intergenic | 40.0% | |
! | GTTAGGTCTATGTGCTTTTC+GGG | - | chr2_3:1490389-1490408 | Msa0270200:intron | 40.0% |
CTGAACTTTATTCTGGTGGA+CGG | - | chr2_3:1490445-1490464 | Msa0270200:intron | 40.0% | |
! | TGAACTTTATTCTGGTGGAC+GGG | - | chr2_3:1490446-1490465 | Msa0270200:intron | 40.0% |
TCATGAAAAGACTCCAGAAC+AGG | - | chr2_3:1490509-1490528 | Msa0270200:intron | 40.0% | |
GAATTGAGTGGGGTAAGAAA+AGG | + | chr2_3:1491069-1491088 | None:intergenic | 40.0% | |
! | TTGCCGTATTTCTATCTACC+GGG | - | chr2_3:1491400-1491419 | Msa0270200:CDS | 40.0% |
TGACCCGGTAGATAGAAATA+CGG | + | chr2_3:1491406-1491425 | None:intergenic | 40.0% | |
AGGAAAGGTTGGAAAGAAGA+CGG | - | chr2_3:1491477-1491496 | Msa0270200:CDS | 40.0% | |
GCATATAAATCTTGAGCTCC+TGG | - | chr2_3:1491517-1491536 | Msa0270200:CDS | 40.0% | |
!! | ATGTAAGATGCACTGATTCC+AGG | + | chr2_3:1491538-1491557 | None:intergenic | 40.0% |
ACGCTTAGCATCATGAACAT+TGG | + | chr2_3:1491594-1491613 | None:intergenic | 40.0% | |
AACTGTCAGGGATCATGTTA+TGG | - | chr2_3:1491685-1491704 | Msa0270200:CDS | 40.0% | |
GCCACAAGGGTTCTTATTAA+TGG | - | chr2_3:1491710-1491729 | Msa0270200:CDS | 40.0% | |
CAATAATGTCAAAGGCCTTC+TGG | + | chr2_3:1491742-1491761 | None:intergenic | 40.0% | |
TTATTGCATCTCTTGAGGTG+TGG | - | chr2_3:1491756-1491775 | Msa0270200:CDS | 40.0% | |
!! | ATCCTTCAGCATTTCTAGCA+CGG | + | chr2_3:1491804-1491823 | None:intergenic | 40.0% |
GCTGAAGGATAAAATCAAGG+AGG | - | chr2_3:1491814-1491833 | Msa0270200:CDS | 40.0% | |
GAAGGATAAAATCAAGGAGG+AGG | - | chr2_3:1491817-1491836 | Msa0270200:CDS | 40.0% | |
CTGACAATACTATGAACACG+AGG | + | chr2_3:1491929-1491948 | None:intergenic | 40.0% | |
CAGTAGGATGATGATCAATG+AGG | - | chr2_3:1491946-1491965 | Msa0270200:CDS | 40.0% | |
CTGAAAATAATGCACCCAGT+TGG | + | chr2_3:1491995-1492014 | None:intergenic | 40.0% | |
ATGAAAGAGCTACAGAAGCA+AGG | - | chr2_3:1492089-1492108 | Msa0270200:CDS | 40.0% | |
TCCTATTCTCAAACAAGGCA+AGG | - | chr2_3:1492226-1492245 | Msa0270200:CDS | 40.0% | |
!! | CTTCGTGTTAGTTTGTTGTG+TGG | - | chr2_3:1492676-1492695 | Msa0270200:five_prime_UTR | 40.0% |
!!! | GGTTTTGTTTTGCGCGATGA+AGG | + | chr2_3:1488500-1488519 | None:intergenic | 45.0% |
!! | TCGAAGCCATTGGTTTAGTC+TGG | + | chr2_3:1488540-1488559 | None:intergenic | 45.0% |
AACCAATGGCTTCGAGATTC+TGG | - | chr2_3:1488545-1488564 | Msa0270200:three_prime_UTR | 45.0% | |
! | TCAACGGGTTCAGTATCGTT+AGG | + | chr2_3:1488755-1488774 | None:intergenic | 45.0% |
!! | CAACAACGGGTTTGGTTTGT+AGG | + | chr2_3:1488811-1488830 | None:intergenic | 45.0% |
! | ACTGTCATCAACAACGGGTT+TGG | + | chr2_3:1488819-1488838 | None:intergenic | 45.0% |
TCGTCACTGTCATCAACAAC+GGG | + | chr2_3:1488824-1488843 | None:intergenic | 45.0% | |
GTCGTCACTGTCATCAACAA+CGG | + | chr2_3:1488825-1488844 | None:intergenic | 45.0% | |
GCTTGAAGATTTCCTTGCTC+AGG | - | chr2_3:1489060-1489079 | Msa0270200:CDS | 45.0% | |
TATTAGCAGAAGCCTGAGCA+AGG | + | chr2_3:1489075-1489094 | None:intergenic | 45.0% | |
TGCTCAGGCTTCTGCTAATA+AGG | - | chr2_3:1489075-1489094 | Msa0270200:CDS | 45.0% | |
! | TTGAAGGCTTTGGCATTGCT+GGG | + | chr2_3:1489121-1489140 | None:intergenic | 45.0% |
TCATTGAACCTGATCAGCTC+AGG | - | chr2_3:1489278-1489297 | Msa0270200:CDS | 45.0% | |
GAAGTTTCAGAATCCGACAC+GGG | + | chr2_3:1489313-1489332 | None:intergenic | 45.0% | |
!! | CTTCTGAGCTTGGTAATGAC+AGG | - | chr2_3:1489329-1489348 | Msa0270200:CDS | 45.0% |
! | TCAAAGAGATTCTGGAAGCC+AGG | - | chr2_3:1489473-1489492 | Msa0270200:CDS | 45.0% |
! | CAAAGAGATTCTGGAAGCCA+GGG | - | chr2_3:1489474-1489493 | Msa0270200:CDS | 45.0% |
! | AAAGAGATTCTGGAAGCCAG+GGG | - | chr2_3:1489475-1489494 | Msa0270200:CDS | 45.0% |
! | GCTGCAGATTCTTTTCAGTG+TGG | - | chr2_3:1489576-1489595 | Msa0270200:CDS | 45.0% |
ATGTTAATCCAGGCCTCAGT+GGG | - | chr2_3:1489614-1489633 | Msa0270200:CDS | 45.0% | |
GGCATATGCCCATAAATGTG+TGG | - | chr2_3:1489635-1489654 | Msa0270200:CDS | 45.0% | |
AAGTTGCCCCAGACATGAAT+GGG | + | chr2_3:1489784-1489803 | None:intergenic | 45.0% | |
TAAGTTGCCCCAGACATGAA+TGG | + | chr2_3:1489785-1489804 | None:intergenic | 45.0% | |
TGTTCTTGCACAGAATGTCC+AGG | - | chr2_3:1489912-1489931 | Msa0270200:intron | 45.0% | |
!! | CTTCTAAGGTAGCCTTGAAG+AGG | - | chr2_3:1489968-1489987 | Msa0270200:intron | 45.0% |
ATGACCGTAGAGGGAGATAA+TGG | - | chr2_3:1490051-1490070 | Msa0270200:intron | 45.0% | |
CTCTCCATTATCTCCCTCTA+CGG | + | chr2_3:1490058-1490077 | None:intergenic | 45.0% | |
AGTTCCGGGGTAACAACAAA+CGG | + | chr2_3:1490126-1490145 | None:intergenic | 45.0% | |
AACAGGGCTATGTCACAGTT+AGG | - | chr2_3:1490372-1490391 | Msa0270200:intron | 45.0% | |
!!! | GTCTATGTGCTTTTCGGGTT+GGG | - | chr2_3:1490394-1490413 | Msa0270200:intron | 45.0% |
CCAGAACAGGTACTAAATCC+CGG | - | chr2_3:1490522-1490541 | Msa0270200:intron | 45.0% | |
TGTTGTGGTCAAGTGCATAC+CGG | - | chr2_3:1490593-1490612 | Msa0270200:intron | 45.0% | |
TTTCATCTTGTTACTGGGGG+AGG | - | chr2_3:1490931-1490950 | Msa0270200:CDS | 45.0% | |
TTCATCTTGTTACTGGGGGA+GGG | - | chr2_3:1490932-1490951 | Msa0270200:CDS | 45.0% | |
! | TTGCCATTGGTAGTTCGGTT+TGG | - | chr2_3:1491103-1491122 | Msa0270200:CDS | 45.0% |
! | TACGGCAAAAGTTGCCGATT+AGG | + | chr2_3:1491388-1491407 | None:intergenic | 45.0% |
GATTAAACCCTCACATGACC+CGG | + | chr2_3:1491421-1491440 | None:intergenic | 45.0% | |
TCTTACATCTGCTATGCTGC+TGG | - | chr2_3:1491550-1491569 | Msa0270200:CDS | 45.0% | |
! | TGAACATTGGCTGCCATGTT+GGG | + | chr2_3:1491581-1491600 | None:intergenic | 45.0% |
! | ATGAACATTGGCTGCCATGT+TGG | + | chr2_3:1491582-1491601 | None:intergenic | 45.0% |
TCTCACTGACCTCAAGTAAG+CGG | + | chr2_3:1491640-1491659 | None:intergenic | 45.0% | |
ACATGATCCCTGACAGTTTC+AGG | + | chr2_3:1491683-1491702 | None:intergenic | 45.0% | |
ATCATGTTATGGCTGCCACA+AGG | - | chr2_3:1491696-1491715 | Msa0270200:CDS | 45.0% | |
TCATGTTATGGCTGCCACAA+GGG | - | chr2_3:1491697-1491716 | Msa0270200:CDS | 45.0% | |
AGAGCTACAGAAGCAAGGTT+AGG | - | chr2_3:1492094-1492113 | Msa0270200:CDS | 45.0% | |
!! | GCCTTGCCTTGTTTGAGAAT+AGG | + | chr2_3:1492230-1492249 | None:intergenic | 45.0% |
GCATTATCGTTCAGTCAAGC+TGG | - | chr2_3:1492280-1492299 | Msa0270200:CDS | 45.0% | |
TTATCGTTCAGTCAAGCTGG+TGG | - | chr2_3:1492283-1492302 | Msa0270200:CDS | 45.0% | |
TATCGTTCAGTCAAGCTGGT+GGG | - | chr2_3:1492284-1492303 | Msa0270200:CDS | 45.0% | |
AGAATTCAGGGAGGACTCAA+GGG | - | chr2_3:1492353-1492372 | Msa0270200:CDS | 45.0% | |
TCAAGGGGGTTCAACATTGA+GGG | - | chr2_3:1492369-1492388 | Msa0270200:CDS | 45.0% | |
CAGAACAAACATTGGGAGCT+GGG | + | chr2_3:1492585-1492604 | None:intergenic | 45.0% | |
TCAGAACAAACATTGGGAGC+TGG | + | chr2_3:1492586-1492605 | None:intergenic | 45.0% | |
!! | TTATTATTATTATTATTCTT+AGG | - | chr2_3:1488682-1488701 | Msa0270200:three_prime_UTR | 5.0% |
!! | TATTATTATTATTATTCTTA+GGG | - | chr2_3:1488683-1488702 | Msa0270200:three_prime_UTR | 5.0% |
GTCCAGAATCTCGAAGCCAT+TGG | + | chr2_3:1488550-1488569 | None:intergenic | 50.0% | |
GCTGGGACTCATCTTCTTCT+TGG | + | chr2_3:1489104-1489123 | None:intergenic | 50.0% | |
! | GTTGAAGGCTTTGGCATTGC+TGG | + | chr2_3:1489122-1489141 | None:intergenic | 50.0% |
GGAAAAGGATGACGAGGATG+AGG | - | chr2_3:1489225-1489244 | Msa0270200:CDS | 50.0% | |
!! | TGATGATGGCGATGCTCCTT+GGG | - | chr2_3:1489360-1489379 | Msa0270200:CDS | 50.0% |
GTGTCCCATGTGATCTCACT+AGG | + | chr2_3:1489439-1489458 | None:intergenic | 50.0% | |
GGGAACTGGAAGGTTTGAAC+AGG | - | chr2_3:1489504-1489523 | Msa0270200:CDS | 50.0% | |
AGAATCTGCAGCTTCTGAGC+AGG | + | chr2_3:1489568-1489587 | None:intergenic | 50.0% | |
GATGTTAATCCAGGCCTCAG+TGG | - | chr2_3:1489613-1489632 | Msa0270200:CDS | 50.0% | |
TTATGGGCATATGCCCACTG+AGG | + | chr2_3:1489630-1489649 | None:intergenic | 50.0% | |
CGTGCAGCACCCAAACATAA+AGG | - | chr2_3:1489699-1489718 | Msa0270200:CDS | 50.0% | |
!! | ATGACGGACCCATTCATGTC+TGG | - | chr2_3:1489773-1489792 | Msa0270200:intron | 50.0% |
! | TGACGGACCCATTCATGTCT+GGG | - | chr2_3:1489774-1489793 | Msa0270200:intron | 50.0% |
ATTGGCTGAGATGACCGTAG+AGG | - | chr2_3:1490041-1490060 | Msa0270200:intron | 50.0% | |
TTGGCTGAGATGACCGTAGA+GGG | - | chr2_3:1490042-1490061 | Msa0270200:intron | 50.0% | |
!! | TGCTCCGTTTGTTGTTACCC+CGG | - | chr2_3:1490119-1490138 | Msa0270200:intron | 50.0% |
TGTTGTTACCCCGGAACTTG+TGG | - | chr2_3:1490128-1490147 | Msa0270200:intron | 50.0% | |
!!! | CTGCTATTTTCCGGGAAGGT+GGG | + | chr2_3:1490162-1490181 | None:intergenic | 50.0% |
!!! | GGTCTATGTGCTTTTCGGGT+TGG | - | chr2_3:1490393-1490412 | Msa0270200:intron | 50.0% |
! | TTATTCTGGTGGACGGGTGA+AGG | - | chr2_3:1490452-1490471 | Msa0270200:intron | 50.0% |
GTGAAGGAATTGCTTGCGCA+AGG | - | chr2_3:1490468-1490487 | Msa0270200:intron | 50.0% | |
CCGGGATTTAGTACCTGTTC+TGG | + | chr2_3:1490525-1490544 | None:intergenic | 50.0% | |
TCATCTTGTTACTGGGGGAG+GGG | - | chr2_3:1490933-1490952 | Msa0270200:CDS | 50.0% | |
TGGCCAAACCGAACTACCAA+TGG | + | chr2_3:1491109-1491128 | None:intergenic | 50.0% | |
TCTATCTACCGGGTCATGTG+AGG | - | chr2_3:1491410-1491429 | Msa0270200:CDS | 50.0% | |
CTATCTACCGGGTCATGTGA+GGG | - | chr2_3:1491411-1491430 | Msa0270200:CDS | 50.0% | |
GAATTTCCGCCGCTTACTTG+AGG | - | chr2_3:1491628-1491647 | Msa0270200:CDS | 50.0% | |
TGATCCCTGACAGTTTCAGG+AGG | + | chr2_3:1491680-1491699 | None:intergenic | 50.0% | |
CACCGTGCTAGAAATGCTGA+AGG | - | chr2_3:1491799-1491818 | Msa0270200:CDS | 50.0% | |
!! | AAATCAAGGAGGAGGCGCTT+AGG | - | chr2_3:1491825-1491844 | Msa0270200:CDS | 50.0% |
ATGAGGAGCTTCATGCAAGC+TGG | - | chr2_3:1491963-1491982 | Msa0270200:CDS | 50.0% | |
TGAGGAGCTTCATGCAAGCT+GGG | - | chr2_3:1491964-1491983 | Msa0270200:CDS | 50.0% | |
! | TGTTGAACTCTCAAGGGTGC+AGG | - | chr2_3:1492018-1492037 | Msa0270200:CDS | 50.0% |
GCTACAGAAGCAAGGTTAGG+CGG | - | chr2_3:1492097-1492116 | Msa0270200:CDS | 50.0% | |
TCTCAAACAAGGCAAGGCAG+TGG | - | chr2_3:1492232-1492251 | Msa0270200:CDS | 50.0% | |
GAGGCGGCTATCAGAATTCA+GGG | - | chr2_3:1492341-1492360 | Msa0270200:CDS | 50.0% | |
CAGAATTCAGGGAGGACTCA+AGG | - | chr2_3:1492352-1492371 | Msa0270200:CDS | 50.0% | |
GAATTCAGGGAGGACTCAAG+GGG | - | chr2_3:1492354-1492373 | Msa0270200:CDS | 50.0% | |
AATTCAGGGAGGACTCAAGG+GGG | - | chr2_3:1492355-1492374 | Msa0270200:CDS | 50.0% | |
CTCAAGGGGGTTCAACATTG+AGG | - | chr2_3:1492368-1492387 | Msa0270200:CDS | 50.0% | |
CAAGGGGGTTCAACATTGAG+GGG | - | chr2_3:1492370-1492389 | Msa0270200:CDS | 50.0% | |
!! | GCGGGTAGAAGTATCTACGT+GGG | + | chr2_3:1492398-1492417 | None:intergenic | 50.0% |
!! | TGCGGGTAGAAGTATCTACG+TGG | + | chr2_3:1492399-1492418 | None:intergenic | 50.0% |
CGTAGATACTTCTACCCGCA+TGG | - | chr2_3:1492399-1492418 | Msa0270200:CDS | 50.0% | |
!! | TACCCGCATGGTTAGCCTTA+GGG | - | chr2_3:1492411-1492430 | Msa0270200:CDS | 50.0% |
GGCTTCGAGATTCTGGACAC+AGG | - | chr2_3:1488552-1488571 | Msa0270200:three_prime_UTR | 55.0% | |
GACAGTGACGACGACGATGA+TGG | - | chr2_3:1488833-1488852 | Msa0270200:CDS | 55.0% | |
TAGGGAGAGTCCTGAGAGTG+AGG | - | chr2_3:1489201-1489220 | Msa0270200:CDS | 55.0% | |
AGGGAGAGTCCTGAGAGTGA+GGG | - | chr2_3:1489202-1489221 | Msa0270200:CDS | 55.0% | |
TCCTGAGAGTGAGGGGGAAA+AGG | - | chr2_3:1489210-1489229 | Msa0270200:CDS | 55.0% | |
! | TCCTTTTCCCCCTCACTCTC+AGG | + | chr2_3:1489214-1489233 | None:intergenic | 55.0% |
TGAGGGGGAAAAGGATGACG+AGG | - | chr2_3:1489219-1489238 | Msa0270200:CDS | 55.0% | |
ACCTGATCAGCTCAGGAAGC+CGG | - | chr2_3:1489285-1489304 | Msa0270200:CDS | 55.0% | |
!! | CTTGGTAATGACAGGCCTCC+TGG | - | chr2_3:1489337-1489356 | Msa0270200:CDS | 55.0% |
!! | GTGATGATGGCGATGCTCCT+TGG | - | chr2_3:1489359-1489378 | Msa0270200:CDS | 55.0% |
GACGGACCCATTCATGTCTG+GGG | - | chr2_3:1489775-1489794 | Msa0270200:intron | 55.0% | |
!!! | CCTGCTATTTTCCGGGAAGG+TGG | + | chr2_3:1490163-1490182 | None:intergenic | 55.0% |
CCACCTTCCCGGAAAATAGC+AGG | - | chr2_3:1490160-1490179 | Msa0270200:intron | 55.0% | |
!!! | GGTCCTGCTATTTTCCGGGA+AGG | + | chr2_3:1490166-1490185 | None:intergenic | 55.0% |
!!! | ATGTGCTTTTCGGGTTGGGC+TGG | - | chr2_3:1490398-1490417 | Msa0270200:intron | 55.0% |
CATCTTGTTACTGGGGGAGG+GGG | - | chr2_3:1490934-1490953 | Msa0270200:CDS | 55.0% | |
ATAGAGCATGAGGGGAAGCG+TGG | - | chr2_3:1491043-1491062 | Msa0270200:CDS | 55.0% | |
GCTGCTGGAAGTTCCCAACA+TGG | - | chr2_3:1491565-1491584 | Msa0270200:CDS | 55.0% | |
CACTGACCTCAAGTAAGCGG+CGG | + | chr2_3:1491637-1491656 | None:intergenic | 55.0% | |
CCTGACAGTTTCAGGAGGAC+CGG | + | chr2_3:1491675-1491694 | None:intergenic | 55.0% | |
CGGTCCTCCTGAAACTGTCA+GGG | - | chr2_3:1491673-1491692 | Msa0270200:CDS | 55.0% | |
CAAGCTGGGATCAGCCAACT+GGG | - | chr2_3:1491978-1491997 | Msa0270200:CDS | 55.0% | |
! | ACTCTCAAGGGTGCAGGCTT+TGG | - | chr2_3:1492024-1492043 | Msa0270200:CDS | 55.0% |
ACAGAAGCAAGGTTAGGCGG+CGG | - | chr2_3:1492100-1492119 | Msa0270200:CDS | 55.0% | |
TGCCTCCAAGGCGAAGAGAT+GGG | - | chr2_3:1492134-1492153 | Msa0270200:CDS | 55.0% | |
!! | GGTGGTAGTGGAACGTCTTC+AGG | - | chr2_3:1492184-1492203 | Msa0270200:CDS | 55.0% |
!! | GGTAGTGGAACGTCTTCAGG+TGG | - | chr2_3:1492187-1492206 | Msa0270200:CDS | 55.0% |
GGCAGTGGACGTACAGGATA+CGG | - | chr2_3:1492247-1492266 | Msa0270200:CDS | 55.0% | |
AGTGGACGTACAGGATACGG+TGG | - | chr2_3:1492250-1492269 | Msa0270200:CDS | 55.0% | |
TTCAGTCAAGCTGGTGGGAG+TGG | - | chr2_3:1492289-1492308 | Msa0270200:CDS | 55.0% | |
! | GTGGCGGCTATTCTAGAGGA+CGG | - | chr2_3:1492308-1492327 | Msa0270200:CDS | 55.0% |
! | TGGCGGCTATTCTAGAGGAC+GGG | - | chr2_3:1492309-1492328 | Msa0270200:CDS | 55.0% |
TCTAGAGGACGGGGAACGAT+TGG | - | chr2_3:1492319-1492338 | Msa0270200:CDS | 55.0% | |
GGAGGCGGCTATCAGAATTC+AGG | - | chr2_3:1492340-1492359 | Msa0270200:CDS | 55.0% | |
GCGGCTATCAGAATTCAGGG+AGG | - | chr2_3:1492344-1492363 | Msa0270200:CDS | 55.0% | |
!! | CTACCCGCATGGTTAGCCTT+AGG | - | chr2_3:1492410-1492429 | Msa0270200:CDS | 55.0% |
!! | ACCCGCATGGTTAGCCTTAG+GGG | - | chr2_3:1492412-1492431 | Msa0270200:CDS | 55.0% |
TCCCCTAAGGCTAACCATGC+GGG | + | chr2_3:1492416-1492435 | None:intergenic | 55.0% | |
CTCCCCTAAGGCTAACCATG+CGG | + | chr2_3:1492417-1492436 | None:intergenic | 55.0% | |
GTCAAGCACGAACTCCCCTA+AGG | + | chr2_3:1492429-1492448 | None:intergenic | 55.0% | |
CAAACATTGGGAGCTGGGAG+AGG | + | chr2_3:1492580-1492599 | None:intergenic | 55.0% | |
GGGAGAGTCCTGAGAGTGAG+GGG | - | chr2_3:1489203-1489222 | Msa0270200:CDS | 60.0% | |
GGAGAGTCCTGAGAGTGAGG+GGG | - | chr2_3:1489204-1489223 | Msa0270200:CDS | 60.0% | |
TCCGGCTTCCTGAGCTGATC+AGG | + | chr2_3:1489289-1489308 | None:intergenic | 60.0% | |
TCAGAATCCGACACGGGCTC+CGG | + | chr2_3:1489307-1489326 | None:intergenic | 60.0% | |
! | GACAGGCCTCCTGGTGATGA+TGG | - | chr2_3:1489346-1489365 | Msa0270200:CDS | 60.0% |
GCATCGCCATCATCACCAGG+AGG | + | chr2_3:1489355-1489374 | None:intergenic | 60.0% | |
!! | GGAGCATCGCCATCATCACC+AGG | + | chr2_3:1489358-1489377 | None:intergenic | 60.0% |
! | AGATTCTGGAAGCCAGGGGC+AGG | - | chr2_3:1489479-1489498 | Msa0270200:CDS | 60.0% |
TTACCCCGGAACTTGTGGCG+CGG | - | chr2_3:1490133-1490152 | Msa0270200:intron | 60.0% | |
TTTCCGCGCCACAAGTTCCG+GGG | + | chr2_3:1490139-1490158 | None:intergenic | 60.0% | |
GTTTCCGCGCCACAAGTTCC+GGG | + | chr2_3:1490140-1490159 | None:intergenic | 60.0% | |
GGTTTCCGCGCCACAAGTTC+CGG | + | chr2_3:1490141-1490160 | None:intergenic | 60.0% | |
!! | GGGCTGGTTTCTGAAGCGCA+TGG | - | chr2_3:1490414-1490433 | Msa0270200:intron | 60.0% |
CCGGTCCTCCTGAAACTGTC+AGG | - | chr2_3:1491672-1491691 | Msa0270200:CDS | 60.0% | |
GCAAGCTGGGATCAGCCAAC+TGG | - | chr2_3:1491977-1491996 | Msa0270200:CDS | 60.0% | |
AAGCAAGGTTAGGCGGCGGT+GGG | - | chr2_3:1492104-1492123 | Msa0270200:CDS | 60.0% | |
!! | GTGGGTTGGATCTGCCTCCA+AGG | - | chr2_3:1492122-1492141 | Msa0270200:CDS | 60.0% |
CTGCCTCCAAGGCGAAGAGA+TGG | - | chr2_3:1492133-1492152 | Msa0270200:CDS | 60.0% | |
TGCCCATCTCTTCGCCTTGG+AGG | + | chr2_3:1492139-1492158 | None:intergenic | 60.0% | |
TCCAAGGCGAAGAGATGGGC+AGG | - | chr2_3:1492138-1492157 | Msa0270200:CDS | 60.0% | |
TCCTGCCCATCTCTTCGCCT+TGG | + | chr2_3:1492142-1492161 | None:intergenic | 60.0% | |
GATTATGCCGCTGCAGCTGC+TGG | - | chr2_3:1492160-1492179 | Msa0270200:CDS | 60.0% | |
GTGGAACGTCTTCAGGTGGC+AGG | - | chr2_3:1492191-1492210 | Msa0270200:CDS | 60.0% | |
GAACGTCTTCAGGTGGCAGG+TGG | - | chr2_3:1492194-1492213 | Msa0270200:CDS | 60.0% | |
AGGCAAGGCAGTGGACGTAC+AGG | - | chr2_3:1492241-1492260 | Msa0270200:CDS | 60.0% | |
GGACGTACAGGATACGGTGG+AGG | - | chr2_3:1492253-1492272 | Msa0270200:CDS | 60.0% | |
AGTCAAGCTGGTGGGAGTGG+CGG | - | chr2_3:1492292-1492311 | Msa0270200:CDS | 60.0% | |
GGGAGTGGCGGCTATTCTAG+AGG | - | chr2_3:1492304-1492323 | Msa0270200:CDS | 60.0% | |
! | GGCGGCTATTCTAGAGGACG+GGG | - | chr2_3:1492310-1492329 | Msa0270200:CDS | 60.0% |
AGAGGACGGGGAACGATTGG+AGG | - | chr2_3:1492322-1492341 | Msa0270200:CDS | 60.0% | |
CATTGGGAGCTGGGAGAGGA+GGG | + | chr2_3:1492576-1492595 | None:intergenic | 60.0% | |
ACATTGGGAGCTGGGAGAGG+AGG | + | chr2_3:1492577-1492596 | None:intergenic | 60.0% | |
TCTGGAAGCCAGGGGCAGGA+AGG | - | chr2_3:1489483-1489502 | Msa0270200:CDS | 65.0% | |
CTGGAAGCCAGGGGCAGGAA+GGG | - | chr2_3:1489484-1489503 | Msa0270200:CDS | 65.0% | |
TCCAGTTCCCTTCCTGCCCC+TGG | + | chr2_3:1489494-1489513 | None:intergenic | 65.0% | |
GGGGCAGGAAGGGAACTGGA+AGG | - | chr2_3:1489494-1489513 | Msa0270200:CDS | 65.0% | |
GGCATATGCCCACTGAGGCC+TGG | + | chr2_3:1489625-1489644 | None:intergenic | 65.0% | |
GAAGCAAGGTTAGGCGGCGG+TGG | - | chr2_3:1492103-1492122 | Msa0270200:CDS | 65.0% | |
AAGGTTAGGCGGCGGTGGGT+TGG | - | chr2_3:1492108-1492127 | Msa0270200:CDS | 65.0% | |
TATGCCGCTGCAGCTGCTGG+TGG | - | chr2_3:1492163-1492182 | Msa0270200:CDS | 65.0% | |
ACCACCACCAGCAGCTGCAG+CGG | + | chr2_3:1492170-1492189 | None:intergenic | 65.0% | |
!! | GCAGCTGCTGGTGGTGGTAG+TGG | - | chr2_3:1492172-1492191 | Msa0270200:CDS | 65.0% |
GGACGGGGAACGATTGGAGG+CGG | - | chr2_3:1492325-1492344 | Msa0270200:CDS | 65.0% | |
CAGGAAGCCGGAGCCCGTGT+CGG | - | chr2_3:1489297-1489316 | Msa0270200:CDS | 70.0% | |
GCCAGGGGCAGGAAGGGAAC+TGG | - | chr2_3:1489490-1489509 | Msa0270200:CDS | 70.0% | |
GGCGCGGAAACCCACCTTCC+CGG | - | chr2_3:1490149-1490168 | Msa0270200:intron | 70.0% | |
GCCGCTGCAGCTGCTGGTGG+TGG | - | chr2_3:1492166-1492185 | Msa0270200:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_3 | gene | 1488471 | 1492744 | 1488471 | ID=Msa0270200;Name=Msa0270200 |
chr2_3 | mRNA | 1488471 | 1492744 | 1488471 | ID=Msa0270200-mRNA-1;Parent=Msa0270200;Name=Msa0270200-mRNA-1;_AED=0.01;_eAED=0.01;_QI=79|1|1|1|1|1|3|297|939 |
chr2_3 | exon | 1488471 | 1489736 | 1488471 | ID=Msa0270200-mRNA-1:exon:685;Parent=Msa0270200-mRNA-1 |
chr2_3 | exon | 1490685 | 1492511 | 1490685 | ID=Msa0270200-mRNA-1:exon:684;Parent=Msa0270200-mRNA-1 |
chr2_3 | exon | 1492642 | 1492744 | 1492642 | ID=Msa0270200-mRNA-1:exon:683;Parent=Msa0270200-mRNA-1 |
chr2_3 | five_prime_UTR | 1492666 | 1492744 | 1492666 | ID=Msa0270200-mRNA-1:five_prime_utr;Parent=Msa0270200-mRNA-1 |
chr2_3 | CDS | 1492642 | 1492665 | 1492642 | ID=Msa0270200-mRNA-1:cds;Parent=Msa0270200-mRNA-1 |
chr2_3 | CDS | 1490685 | 1492511 | 1490685 | ID=Msa0270200-mRNA-1:cds;Parent=Msa0270200-mRNA-1 |
chr2_3 | CDS | 1488768 | 1489736 | 1488768 | ID=Msa0270200-mRNA-1:cds;Parent=Msa0270200-mRNA-1 |
chr2_3 | three_prime_UTR | 1488471 | 1488767 | 1488471 | ID=Msa0270200-mRNA-1:three_prime_utr;Parent=Msa0270200-mRNA-1 |
Gene Sequence |
Protein sequence |