AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0270200


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0270200 MtrunA17_Chr2g0277001 95.016 943 35 4 1 939 1 935 0.0 1673
Msa0270200 MtrunA17_Chr7g0275381 93.305 941 56 6 1 939 1 936 0.0 1669
Msa0270200 MtrunA17_Chr1g0155771 94.468 940 46 4 1 939 1 935 0.0 1639
Msa0270200 MtrunA17_Chr6g0468211 57.241 580 135 10 262 837 62 532 0.0 566
Msa0270200 MtrunA17_Chr2g0316781 51.852 405 49 7 167 570 12 271 1.97e-113 349
Msa0270200 MtrunA17_Chr2g0303811 81.935 155 28 0 568 722 1 155 9.93e-86 271
Msa0270200 MtrunA17_Chr6g0468421 57.752 258 41 3 325 582 1 190 1.24e-83 267
Msa0270200 MtrunA17_Chr6g0468011 60.606 198 47 4 262 457 12 180 7.65e-65 216
Msa0270200 MtrunA17_Chr6g0468411 75.556 135 29 1 559 689 5 139 3.79e-63 211
Msa0270200 MtrunA17_Chr2g0303821 61.468 109 41 1 730 837 1 109 2.20e-37 137
Msa0270200 MtrunA17_Chr6g0467941 47.917 144 23 2 546 689 1 92 3.57e-31 118
Msa0270200 MtrunA17_Chr6g0467931 65.347 101 33 2 729 827 1 101 4.54e-31 117
Msa0270200 MtrunA17_Chr6g0468001 57.658 111 25 3 729 837 1 91 2.07e-28 111
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0270200 AT3G56150.2 66.526 947 262 14 1 939 1 900 0.0 1154
Msa0270200 AT3G56150.1 66.526 947 262 14 1 939 1 900 0.0 1154
Msa0270200 AT3G22860.1 63.799 616 204 6 246 851 181 787 0.0 788

Find 271 sgRNAs with CRISPR-Local

Find 371 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAATGTTTGTTCTGATTTA+TGG 0.039660 2_3:-1488603 Msa0270200:three_prime_UTR
TCTGGTTGTTATGAGAATTT+AGG 0.156316 2_3:+1492674 None:intergenic
CAAGAAGTTCAAAGAGATTC+TGG 0.204715 2_3:-1491728 Msa0270200:CDS
GATTTCAGATGAAATTTCTT+TGG 0.216565 2_3:-1488663 Msa0270200:three_prime_UTR
GCACTGTAAGCCAGAGATTT+TGG 0.217294 2_3:-1488471 Msa0270200:three_prime_UTR
GCTGGGACTCATCTTCTTCT+TGG 0.219134 2_3:+1492092 None:intergenic
TGTAAAGATTAGGGATCTTT+TGG 0.232109 2_3:+1492172 None:intergenic
ACATGATCCCTGACAGTTTC+AGG 0.235192 2_3:+1489513 None:intergenic
TGTTTGTCTGAACTTTATTC+TGG 0.235265 2_3:-1490755 Msa0270200:CDS
CAATAATGTCAAAGGCCTTC+TGG 0.238181 2_3:+1489454 None:intergenic
GGTTTCCGCGCCACAAGTTC+CGG 0.248793 2_3:+1491055 None:intergenic
GCCACAAGGGTTCTTATTAA+TGG 0.250263 2_3:-1489483 Msa0270200:CDS
AACCAATGGCTTCGAGATTC+TGG 0.262577 2_3:-1492648 Msa0270200:exon
TGCTCAGGCTTCTGCTAATA+AGG 0.263529 2_3:-1492118 Msa0270200:CDS
CTGGTTGTTATGAGAATTTA+GGG 0.266616 2_3:+1492675 None:intergenic
GGAAAATAGCAGGACCTTAA+TGG 0.268698 2_3:-1491023 Msa0270200:CDS
GTTGAAGGCTTTGGCATTGC+TGG 0.280294 2_3:+1492074 None:intergenic
GAATCATCAACCTTTATGTT+TGG 0.286060 2_3:+1491484 None:intergenic
TTTGGTTTGTAGGTATCTAT+TGG 0.296703 2_3:+1492395 None:intergenic
CAACAACGGGTTTGGTTTGT+AGG 0.300152 2_3:+1492385 None:intergenic
TATGCACTTAATCTAGATTC+TGG 0.301092 2_3:-1488685 Msa0270200:three_prime_UTR
TCCAGTTCCCTTCCTGCCCC+TGG 0.302069 2_3:+1491702 None:intergenic
ATCATATGATTCTTTCAGTT+TGG 0.303868 2_3:-1489322 Msa0270200:CDS
CTTCATTGAGTTGAAGGCTT+TGG 0.318286 2_3:+1492065 None:intergenic
CAGATTTAACAACACGCTTT+TGG 0.326666 2_3:+1492337 None:intergenic
TTATGAAGCAACGAGAAAAT+TGG 0.328433 2_3:-1491170 Msa0270200:CDS
GAGATGAGTGAGGAGTTAAA+AGG 0.329554 2_3:-1491118 Msa0270200:CDS
GGAGGCGGCTATCAGAATTC+AGG 0.346447 2_3:-1488853 Msa0270200:CDS
AATCATCAACCTTTATGTTT+GGG 0.349179 2_3:+1491485 None:intergenic
GATTATGCCGCTGCAGCTGC+TGG 0.352272 2_3:-1489033 Msa0270200:CDS
CCGGGATTTAGTACCTGTTC+TGG 0.353112 2_3:+1490671 None:intergenic
TCTATTGGCTGTATTGTTGT+TGG 0.355511 2_3:+1492410 None:intergenic
GGTGGTAGTGGAACGTCTTC+AGG 0.355830 2_3:-1489009 Msa0270200:CDS
TAGCAAGAAAGACAGGCTTT+TGG 0.359604 2_3:-1491800 Msa0270200:CDS
TACCCGCATGGTTAGCCTTA+GGG 0.360330 2_3:-1488782 Msa0270200:CDS
ACTCTCAAGGGTGCAGGCTT+TGG 0.361470 2_3:-1489169 Msa0270200:CDS
ATTTCAGATGAAATTTCTTT+GGG 0.372007 2_3:-1488662 Msa0270200:three_prime_UTR
ATGATGAAGAGAAGGTAAAT+AGG 0.373547 2_3:+1489340 None:intergenic
CAATGCTTTCAAGATATTCC+TGG 0.380146 2_3:+1491263 None:intergenic
AGATTTATATGCATATGATA+TGG 0.383704 2_3:+1489687 None:intergenic
ATGACCGTAGAGGGAGATAA+TGG 0.387791 2_3:-1491142 Msa0270200:CDS
GGCGCGGAAACCCACCTTCC+CGG 0.387923 2_3:-1491044 Msa0270200:CDS
GCAAGCTGGGATCAGCCAAC+TGG 0.390557 2_3:-1489216 Msa0270200:CDS
TCCGGCTTCCTGAGCTGATC+AGG 0.393176 2_3:+1491907 None:intergenic
AGATTTCAAAGCTTCTTCTA+AGG 0.393340 2_3:-1491239 Msa0270200:CDS
CTATTGGCTGTATTGTTGTT+GGG 0.393873 2_3:+1492411 None:intergenic
GCCTTGCCTTGTTTGAGAAT+AGG 0.394600 2_3:+1488966 None:intergenic
CTACCCGCATGGTTAGCCTT+AGG 0.397357 2_3:-1488783 Msa0270200:CDS
GCCAGGGGCAGGAAGGGAAC+TGG 0.399839 2_3:-1491703 Msa0270200:CDS
TGATGATGGCGATGCTCCTT+GGG 0.400541 2_3:-1491833 Msa0270200:CDS
GCTCAGTTTGATGTTAATCC+AGG 0.401276 2_3:-1491589 Msa0270200:CDS
TCGAAGCCATTGGTTTAGTC+TGG 0.401988 2_3:+1492656 None:intergenic
AGAGCCTTGATGTAAAGATT+AGG 0.402756 2_3:+1492162 None:intergenic
GTGATGATGGCGATGCTCCT+TGG 0.404468 2_3:-1491834 Msa0270200:CDS
GCTTGAAGATTTCCTTGCTC+AGG 0.408980 2_3:-1492133 Msa0270200:CDS
CCGGTCCTCCTGAAACTGTC+AGG 0.411793 2_3:-1489521 Msa0270200:CDS
ATGTAAGATGCACTGATTCC+AGG 0.412950 2_3:+1489658 None:intergenic
GAGCCTTGATGTAAAGATTA+GGG 0.415850 2_3:+1492163 None:intergenic
ATGACGGACCCATTCATGTC+TGG 0.416244 2_3:-1491420 Msa0270200:CDS
GCCGCTGCAGCTGCTGGTGG+TGG 0.418701 2_3:-1489027 Msa0270200:CDS
GTTTCCGCGCCACAAGTTCC+GGG 0.419096 2_3:+1491056 None:intergenic
TTAAGTGCATAATAATAAAC+TGG 0.419627 2_3:+1488697 None:intergenic
TAGATAATTTCTCAGTCAAC+TGG 0.421894 2_3:+1489142 None:intergenic
TGATACTAACACATCCATTA+AGG 0.425287 2_3:+1491009 None:intergenic
GCAGCTGCTGGTGGTGGTAG+TGG 0.425549 2_3:-1489021 Msa0270200:CDS
AATGAGTTCAACCCTCTTCA+AGG 0.428889 2_3:+1491213 None:intergenic
ACTGTCATCAACAACGGGTT+TGG 0.429963 2_3:+1492377 None:intergenic
AACAGGGCTATGTCACAGTT+AGG 0.435704 2_3:-1490821 Msa0270200:CDS
TTGAAGGCTTTGGCATTGCT+GGG 0.436119 2_3:+1492075 None:intergenic
GAAACTTGTGCCAAAATCTC+TGG 0.436609 2_3:+1488461 None:intergenic
CGTGCAGCACCCAAACATAA+AGG 0.438376 2_3:-1491494 Msa0270200:CDS
TGCCCATCTCTTCGCCTTGG+AGG 0.438441 2_3:+1489057 None:intergenic
TCAAAGAGATTCTGGAAGCC+AGG 0.439840 2_3:-1491720 Msa0270200:CDS
GCATATAAATCTTGAGCTCC+TGG 0.445116 2_3:-1489676 Msa0270200:CDS
GGCATATGCCCACTGAGGCC+TGG 0.449256 2_3:+1491571 None:intergenic
ATGAGGAGCTTCATGCAAGC+TGG 0.457408 2_3:-1489230 Msa0270200:CDS
TTCAGTCAAGCTGGTGGGAG+TGG 0.458684 2_3:-1488904 Msa0270200:CDS
CAGAACAAACATTGGGAGCT+GGG 0.459982 2_3:+1488611 None:intergenic
ATGAGAATGAAACTAAGAAA+GGG 0.464510 2_3:-1491450 Msa0270200:CDS
TCAGAATCCGACACGGGCTC+CGG 0.466090 2_3:+1491889 None:intergenic
AATTATCTTTCAGGAAAGGT+TGG 0.471050 2_3:-1489727 Msa0270200:intron
TCAGAAATGTTGAACTCTCA+AGG 0.471342 2_3:-1489182 Msa0270200:CDS
TCCTGCCCATCTCTTCGCCT+TGG 0.472750 2_3:+1489054 None:intergenic
TCTAGAGGACGGGGAACGAT+TGG 0.474394 2_3:-1488874 Msa0270200:CDS
AACTGTCAGGGATCATGTTA+TGG 0.475362 2_3:-1489508 Msa0270200:CDS
TCTTACATCTGCTATGCTGC+TGG 0.477105 2_3:-1489643 Msa0270200:CDS
TGAACATTGGCTGCCATGTT+GGG 0.479489 2_3:+1489615 None:intergenic
TAATAAACTGGTAAAAGAAA+AGG 0.479905 2_3:+1488709 None:intergenic
AGCTGCAGTTTCTTCTTCAT+CGG 0.482972 2_3:-1492731 None:intergenic
GGGAACTGGAAGGTTTGAAC+AGG 0.485450 2_3:-1491689 Msa0270200:CDS
GATTCTGAAACTTCTGAGCT+TGG 0.486351 2_3:-1491874 Msa0270200:CDS
TTGTTGGGTTCATCATCAAC+GGG 0.486651 2_3:+1492426 None:intergenic
TAAGTTGCCCCAGACATGAA+TGG 0.490965 2_3:+1491411 None:intergenic
TCATGAAAAGACTCCAGAAC+AGG 0.493182 2_3:-1490684 Msa0270200:intron
GTGAATATGTTGAGAGACTC+AGG 0.493281 2_3:-1491321 Msa0270200:CDS
CAGAATTCAGGGAGGACTCA+AGG 0.493339 2_3:-1488841 Msa0270200:CDS
GAAGCAAGGTTAGGCGGCGG+TGG 0.493372 2_3:-1489090 Msa0270200:CDS
GTTGTTGGGTTCATCATCAA+CGG 0.494263 2_3:+1492425 None:intergenic
TCGTCACTGTCATCAACAAC+GGG 0.495380 2_3:+1492372 None:intergenic
TGACATTATTGCATCTCTTG+AGG 0.496021 2_3:-1489442 Msa0270200:CDS
TCAGAACAAACATTGGGAGC+TGG 0.496440 2_3:+1488610 None:intergenic
CATTGGGAGCTGGGAGAGGA+GGG 0.496780 2_3:+1488620 None:intergenic
TGACGGACCCATTCATGTCT+GGG 0.497542 2_3:-1491419 Msa0270200:CDS
GGAAAAGGATGACGAGGATG+AGG 0.497694 2_3:-1491968 Msa0270200:CDS
CTTGGTAATGACAGGCCTCC+TGG 0.498069 2_3:-1491856 Msa0270200:CDS
CAGGAATATCTTGAAAGCAT+TGG 0.498525 2_3:-1491262 Msa0270200:CDS
TTATTCTGGTGGACGGGTGA+AGG 0.499453 2_3:-1490741 Msa0270200:CDS
AAATCAAGGAGGAGGCGCTT+AGG 0.499787 2_3:-1489368 Msa0270200:CDS
CATAAATCAGAACAAACATT+GGG 0.500452 2_3:+1488604 None:intergenic
ATGAACATTGGCTGCCATGT+TGG 0.505127 2_3:+1489614 None:intergenic
CTGGAAGCCAGGGGCAGGAA+GGG 0.505830 2_3:-1491709 Msa0270200:CDS
TCAACGGGTTCAGTATCGTT+AGG 0.505992 2_3:+1492441 None:intergenic
ACATTGGGAGCTGGGAGAGG+AGG 0.506596 2_3:+1488619 None:intergenic
ATGTTAATCCAGGCCTCAGT+GGG 0.508312 2_3:-1491579 Msa0270200:CDS
ACCCGCATGGTTAGCCTTAG+GGG 0.508509 2_3:-1488781 Msa0270200:CDS
CAGAAATGTTGAACTCTCAA+GGG 0.508616 2_3:-1489181 Msa0270200:CDS
AGATTCTGGAAGCCAGGGGC+AGG 0.509743 2_3:-1491714 Msa0270200:CDS
AGAATTCAGGGAGGACTCAA+GGG 0.510031 2_3:-1488840 Msa0270200:CDS
AGAATCTGCAGCTTCTGAGC+AGG 0.511073 2_3:+1491628 None:intergenic
ATCCTTCAGCATTTCTAGCA+CGG 0.511752 2_3:+1489392 None:intergenic
AAGTTGCCCCAGACATGAAT+GGG 0.512091 2_3:+1491412 None:intergenic
GGCAGTGGACGTACAGGATA+CGG 0.514533 2_3:-1488946 Msa0270200:CDS
GATGAGAATGAAACTAAGAA+AGG 0.515170 2_3:-1491451 Msa0270200:CDS
TCCAAGGCGAAGAGATGGGC+AGG 0.515359 2_3:-1489055 Msa0270200:CDS
AAGGTTAGGCGGCGGTGGGT+TGG 0.516660 2_3:-1489085 Msa0270200:CDS
ACCTGATCAGCTCAGGAAGC+CGG 0.516893 2_3:-1491908 Msa0270200:CDS
TCATTGAACCTGATCAGCTC+AGG 0.519230 2_3:-1491915 Msa0270200:CDS
TGCTCCGTTTGTTGTTACCC+CGG 0.519622 2_3:-1491074 Msa0270200:CDS
GATCCCTAATCTTTACATCA+AGG 0.521376 2_3:-1492166 Msa0270200:CDS
TGGCGGCTATTCTAGAGGAC+GGG 0.522471 2_3:-1488884 Msa0270200:CDS
AGGACTTGATTATCAAATGT+AGG 0.523141 2_3:-1492011 Msa0270200:CDS
TGTTGAACTCTCAAGGGTGC+AGG 0.524552 2_3:-1489175 Msa0270200:CDS
GAGGCGGCTATCAGAATTCA+GGG 0.525246 2_3:-1488852 Msa0270200:CDS
CTCAACATATTCACGTGTGT+GGG 0.525787 2_3:+1491330 None:intergenic
GTGGGTTGGATCTGCCTCCA+AGG 0.528953 2_3:-1489071 Msa0270200:CDS
TCCCCTAAGGCTAACCATGC+GGG 0.529790 2_3:+1488780 None:intergenic
TGTTCTTGCACAGAATGTCC+AGG 0.530188 2_3:-1491281 Msa0270200:CDS
CTGAACTTTATTCTGGTGGA+CGG 0.530497 2_3:-1490748 Msa0270200:CDS
AAAAGCTTAGCAAGAAAGAC+AGG 0.531266 2_3:-1491807 Msa0270200:CDS
CTCTCCATTATCTCCCTCTA+CGG 0.531803 2_3:+1491138 None:intergenic
GTCCAGAATCTCGAAGCCAT+TGG 0.533546 2_3:+1492646 None:intergenic
GGGCTGGTTTCTGAAGCGCA+TGG 0.535363 2_3:-1490779 Msa0270200:CDS
CCACCTTCCCGGAAAATAGC+AGG 0.535658 2_3:-1491033 Msa0270200:CDS
GACTCATAAGCAACAGATCA+CGG 0.536368 2_3:+1490894 None:intergenic
AGAGGACGGGGAACGATTGG+AGG 0.536414 2_3:-1488871 Msa0270200:CDS
GACAGGCCTCCTGGTGATGA+TGG 0.536973 2_3:-1491847 Msa0270200:CDS
ATGCTATCAAGATCAATGAC+TGG 0.537887 2_3:-1492263 Msa0270200:CDS
TGTTGTTACCCCGGAACTTG+TGG 0.539965 2_3:-1491065 Msa0270200:CDS
CTGCCTCCAAGGCGAAGAGA+TGG 0.540348 2_3:-1489060 Msa0270200:CDS
CAAACATTGGGAGCTGGGAG+AGG 0.541139 2_3:+1488616 None:intergenic
TTGTCTGAACTTTATTCTGG+TGG 0.542410 2_3:-1490752 Msa0270200:CDS
AGGCAAGGCAGTGGACGTAC+AGG 0.542622 2_3:-1488952 Msa0270200:CDS
CAAGCTGGGATCAGCCAACT+GGG 0.543584 2_3:-1489215 Msa0270200:CDS
GTGGAACGTCTTCAGGTGGC+AGG 0.543676 2_3:-1489002 Msa0270200:CDS
AGTTCCGGGGTAACAACAAA+CGG 0.544060 2_3:+1491070 None:intergenic
TGAGGAGCTTCATGCAAGCT+GGG 0.544437 2_3:-1489229 Msa0270200:CDS
TAGGGAGAGTCCTGAGAGTG+AGG 0.545078 2_3:-1491992 Msa0270200:CDS
AATGCTGAAGGATAAAATCA+AGG 0.545420 2_3:-1489382 Msa0270200:CDS
TATGCCGCTGCAGCTGCTGG+TGG 0.547820 2_3:-1489030 Msa0270200:CDS
GGACTTGATTATCAAATGTA+GGG 0.548379 2_3:-1492010 Msa0270200:CDS
TCCTATTCTCAAACAAGGCA+AGG 0.549766 2_3:-1488967 Msa0270200:CDS
CTTCTGAGCTTGGTAATGAC+AGG 0.550457 2_3:-1491864 Msa0270200:CDS
CATAAAGGTTGATGATTCTG+TGG 0.552363 2_3:-1491479 Msa0270200:CDS
CCATAAATCAGAACAAACAT+TGG 0.552425 2_3:+1488603 None:intergenic
AGAATCATATGATGAAGAGA+AGG 0.556503 2_3:+1489332 None:intergenic
GAATTTCCGCCGCTTACTTG+AGG 0.559029 2_3:-1489565 Msa0270200:CDS
CCTGACAGTTTCAGGAGGAC+CGG 0.559804 2_3:+1489521 None:intergenic
CTTCTAAGGTAGCCTTGAAG+AGG 0.561694 2_3:-1491225 Msa0270200:CDS
TCTCAAACAAGGCAAGGCAG+TGG 0.563066 2_3:-1488961 Msa0270200:CDS
CAAAGAGATTCTGGAAGCCA+GGG 0.563451 2_3:-1491719 Msa0270200:CDS
TCTGGAAGCCAGGGGCAGGA+AGG 0.564829 2_3:-1491710 Msa0270200:CDS
AAGAGATGCAATAATGTCAA+AGG 0.567228 2_3:+1489446 None:intergenic
GCATTATCGTTCAGTCAAGC+TGG 0.568957 2_3:-1488913 Msa0270200:CDS
GTGTCCCATGTGATCTCACT+AGG 0.569429 2_3:+1491757 None:intergenic
GGACGGGGAACGATTGGAGG+CGG 0.571631 2_3:-1488868 Msa0270200:CDS
GGAGCATCGCCATCATCACC+AGG 0.573601 2_3:+1491838 None:intergenic
TGCCTCCAAGGCGAAGAGAT+GGG 0.574902 2_3:-1489059 Msa0270200:CDS
ACGCTTAGCATCATGAACAT+TGG 0.575475 2_3:+1489602 None:intergenic
ATCATGTTATGGCTGCCACA+AGG 0.575690 2_3:-1489497 Msa0270200:CDS
GGGAGAGTCCTGAGAGTGAG+GGG 0.577170 2_3:-1491990 Msa0270200:CDS
GTATCACTGATATACAAATA+CGG 0.579558 2_3:-1490992 Msa0270200:CDS
TTATTGCATCTCTTGAGGTG+TGG 0.579762 2_3:-1489437 Msa0270200:CDS
TCTCAACATATTCACGTGTG+TGG 0.579942 2_3:+1491329 None:intergenic
TGAACTTTATTCTGGTGGAC+GGG 0.580196 2_3:-1490747 Msa0270200:CDS
AGTGAGAAACAAACATTCAC+CGG 0.580815 2_3:-1489540 Msa0270200:CDS
CTGAAAATAATGCACCCAGT+TGG 0.581929 2_3:+1489201 None:intergenic
CGGTCCTCCTGAAACTGTCA+GGG 0.584556 2_3:-1489520 Msa0270200:CDS
AAAAGCCTAGTGAGATCACA+TGG 0.585381 2_3:-1491762 Msa0270200:CDS
AGGTTCAATGATCTCATCAT+CGG 0.587424 2_3:+1491927 None:intergenic
GTTGCTTCATAAACCTCATG+CGG 0.588345 2_3:+1491181 None:intergenic
GCTACAGAAGCAAGGTTAGG+CGG 0.590150 2_3:-1489096 Msa0270200:CDS
TGAGAATGAAACTAAGAAAG+GGG 0.591503 2_3:-1491449 Msa0270200:CDS
GTCAAGCACGAACTCCCCTA+AGG 0.592556 2_3:+1488767 None:intergenic
GGTTCATCATCAATATCAGT+GGG 0.592619 2_3:+1492462 None:intergenic
ACCACCACCAGCAGCTGCAG+CGG 0.592682 2_3:+1489026 None:intergenic
AGGTTCATCATCAATATCAG+TGG 0.593036 2_3:+1492461 None:intergenic
TTCTAAGGTAGCCTTGAAGA+GGG 0.593307 2_3:-1491224 Msa0270200:CDS
AGAGCTACAGAAGCAAGGTT+AGG 0.594295 2_3:-1489099 Msa0270200:CDS
GTGAAGGAATTGCTTGCGCA+AGG 0.594439 2_3:-1490725 Msa0270200:CDS
ACTCATAAGCAACAGATCAC+GGG 0.595404 2_3:+1490895 None:intergenic
AGATAATGGAGAGATGAGTG+AGG 0.595500 2_3:-1491128 Msa0270200:CDS
AAGCAAGGTTAGGCGGCGGT+GGG 0.595912 2_3:-1489089 Msa0270200:CDS
CATTTACTACAAACCGCATG+AGG 0.596878 2_3:-1491194 Msa0270200:CDS
TGCTATCAAGATCAATGACT+GGG 0.597590 2_3:-1492262 Msa0270200:CDS
AGGAAAGGTTGGAAAGAAGA+CGG 0.598493 2_3:-1489716 Msa0270200:CDS
GGGAGTGGCGGCTATTCTAG+AGG 0.598572 2_3:-1488889 Msa0270200:CDS
TTTCCGCGCCACAAGTTCCG+GGG 0.599206 2_3:+1491057 None:intergenic
AGGGAGAGTCCTGAGAGTGA+GGG 0.600175 2_3:-1491991 Msa0270200:CDS
TTGGCTGAGATGACCGTAGA+GGG 0.603596 2_3:-1491151 Msa0270200:CDS
ATGAAAGAGCTACAGAAGCA+AGG 0.604351 2_3:-1489104 Msa0270200:CDS
AGTCAAGCTGGTGGGAGTGG+CGG 0.604909 2_3:-1488901 Msa0270200:CDS
GAAGGATAAAATCAAGGAGG+AGG 0.606776 2_3:-1489376 Msa0270200:CDS
GTGGCGGCTATTCTAGAGGA+CGG 0.606807 2_3:-1488885 Msa0270200:CDS
CAGGAAGCCGGAGCCCGTGT+CGG 0.608070 2_3:-1491896 Msa0270200:CDS
CGTAGATACTTCTACCCGCA+TGG 0.610484 2_3:-1488794 Msa0270200:CDS
GAATTCAGGGAGGACTCAAG+GGG 0.615559 2_3:-1488839 Msa0270200:CDS
GACAGTGACGACGACGATGA+TGG 0.616344 2_3:-1492360 Msa0270200:CDS
GGCGGCTATTCTAGAGGACG+GGG 0.620265 2_3:-1488883 Msa0270200:CDS
ACTTGTCCTATTCTCAAACA+AGG 0.620485 2_3:-1488972 Msa0270200:CDS
CTTCGTGTTAGTTTGTTGTG+TGG 0.622006 2_3:-1488517 Msa0270200:three_prime_UTR
ACAGAAGCAAGGTTAGGCGG+CGG 0.622574 2_3:-1489093 Msa0270200:CDS
TAACAACCAGACTAAACCAA+TGG 0.622757 2_3:-1492662 Msa0270200:exon
TCCATTAATAAGAACCCTTG+TGG 0.625098 2_3:+1489482 None:intergenic
TATTAGCAGAAGCCTGAGCA+AGG 0.625753 2_3:+1492121 None:intergenic
TCATGTTATGGCTGCCACAA+GGG 0.627218 2_3:-1489496 Msa0270200:CDS
CACTGACCTCAAGTAAGCGG+CGG 0.627273 2_3:+1489559 None:intergenic
GTCGTCACTGTCATCAACAA+CGG 0.633735 2_3:+1492371 None:intergenic
TATCGTTCAGTCAAGCTGGT+GGG 0.636549 2_3:-1488909 Msa0270200:CDS
GGACGTACAGGATACGGTGG+AGG 0.637438 2_3:-1488940 Msa0270200:CDS
GAACGTCTTCAGGTGGCAGG+TGG 0.637601 2_3:-1488999 Msa0270200:CDS
TTATCGTTCAGTCAAGCTGG+TGG 0.641328 2_3:-1488910 Msa0270200:CDS
AAGAAAGGGGATGACTATGA+CGG 0.642172 2_3:-1491436 Msa0270200:CDS
GTGTTCATAGTATTGTCAGT+AGG 0.642718 2_3:-1489263 Msa0270200:CDS
TCAACATATTCACGTGTGTG+GGG 0.645878 2_3:+1491331 None:intergenic
CACCGTGCTAGAAATGCTGA+AGG 0.646843 2_3:-1489394 Msa0270200:CDS
GGCTTCGAGATTCTGGACAC+AGG 0.648433 2_3:-1492641 Msa0270200:intron
GAAGTTTCAGAATCCGACAC+GGG 0.650738 2_3:+1491883 None:intergenic
TATTAATGGAGATTTCCAGA+AGG 0.655339 2_3:-1489469 Msa0270200:CDS
AAAATGCGTGCAGAATATGC+TGG 0.655482 2_3:-1491533 Msa0270200:CDS
GGGGCAGGAAGGGAACTGGA+AGG 0.655940 2_3:-1491699 Msa0270200:CDS
GCAAGAAAATGTTCACCACA+TGG 0.657602 2_3:-1490867 Msa0270200:CDS
GGTAGTGGAACGTCTTCAGG+TGG 0.658306 2_3:-1489006 Msa0270200:CDS
TCTCACTGACCTCAAGTAAG+CGG 0.659845 2_3:+1489556 None:intergenic
CTCCCCTAAGGCTAACCATG+CGG 0.664230 2_3:+1488779 None:intergenic
TTACCCCGGAACTTGTGGCG+CGG 0.666773 2_3:-1491060 Msa0270200:CDS
CAAACTCATCAAGAAGAGCA+TGG 0.667504 2_3:+1490924 None:intergenic
GATGTTAATCCAGGCCTCAG+TGG 0.669943 2_3:-1491580 Msa0270200:CDS
CAGTAGGATGATGATCAATG+AGG 0.670922 2_3:-1489247 Msa0270200:CDS
GCTGCTGGAAGTTCCCAACA+TGG 0.671778 2_3:-1489628 Msa0270200:CDS
GGAGAGTCCTGAGAGTGAGG+GGG 0.672377 2_3:-1491989 Msa0270200:CDS
TGTGCAAGAACAACAAACTG+AGG 0.676475 2_3:+1491292 None:intergenic
GGCATATGCCCATAAATGTG+TGG 0.678845 2_3:-1491558 Msa0270200:CDS
GACGGACCCATTCATGTCTG+GGG 0.680909 2_3:-1491418 Msa0270200:CDS
TGAATATGTTGAGAGACTCA+GGG 0.682868 2_3:-1491320 Msa0270200:CDS
AGAAGTTTCAGAATCCGACA+CGG 0.685846 2_3:+1491882 None:intergenic
ATTGGCTGAGATGACCGTAG+AGG 0.686209 2_3:-1491152 Msa0270200:CDS
CTGACAATACTATGAACACG+AGG 0.689117 2_3:+1489267 None:intergenic
ATTCTTGATCTGATCAACAG+TGG 0.701566 2_3:+1492284 None:intergenic
AAAGAGATTCTGGAAGCCAG+GGG 0.701656 2_3:-1491718 Msa0270200:CDS
GCATCGCCATCATCACCAGG+AGG 0.707685 2_3:+1491841 None:intergenic
TGCGGGTAGAAGTATCTACG+TGG 0.710114 2_3:+1488797 None:intergenic
TGATCCCTGACAGTTTCAGG+AGG 0.717851 2_3:+1489516 None:intergenic
GCGGGTAGAAGTATCTACGT+GGG 0.720335 2_3:+1488798 None:intergenic
AATTCAGGGAGGACTCAAGG+GGG 0.722566 2_3:-1488838 Msa0270200:CDS
GCTGAAGGATAAAATCAAGG+AGG 0.734791 2_3:-1489379 Msa0270200:CDS
AAAGCCTAGTGAGATCACAT+GGG 0.747188 2_3:-1491761 Msa0270200:CDS
GAAGAACAATAAGCAATACG+AGG 0.757858 2_3:-1492031 Msa0270200:CDS
AGTGGACGTACAGGATACGG+TGG 0.758461 2_3:-1488943 Msa0270200:CDS
TTATGGGCATATGCCCACTG+AGG 0.770132 2_3:+1491566 None:intergenic
GCGGCTATCAGAATTCAGGG+AGG 0.799750 2_3:-1488849 Msa0270200:CDS
TTTGTGTCGAAATGTCCATG+TGG 0.823137 2_3:+1490852 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAGAAATAGAAAAAATAAA+AGG - chr2_3:1490699-1490718 Msa0270200:CDS 10.0%
!! CAGAAATTAAATTTGATTAT+TGG - chr2_3:1490828-1490847 Msa0270200:CDS 15.0%
!!! TATTTTCCTTTAATTTTCTA+TGG + chr2_3:1491009-1491028 None:intergenic 15.0%
!!! TAAATTTTTTTGAATTGAGT+GGG + chr2_3:1491080-1491099 None:intergenic 15.0%
!!! ATAAATTTTTTTGAATTGAG+TGG + chr2_3:1491081-1491100 None:intergenic 15.0%
!!! AAAAAATTTATTTTTGCCAT+TGG - chr2_3:1491090-1491109 Msa0270200:CDS 15.0%
!!! TTGTTAATTTTTTTTCTTGA+GGG - chr2_3:1492650-1492669 Msa0270200:exon 15.0%
!! ATCTATTTGAAAAAAATAGC+CGG + chr2_3:1490544-1490563 None:intergenic 20.0%
!! TGTCAATGTAAAGATAAATA+AGG + chr2_3:1490748-1490767 None:intergenic 20.0%
!! TATAATATTATTGCTCAACT+TGG - chr2_3:1490795-1490814 Msa0270200:CDS 20.0%
!!! TGTTTTTGTTTTTGTTTCTA+AGG - chr2_3:1490891-1490910 Msa0270200:CDS 20.0%
!!! TTTTATTTTCATCTTGTTAC+TGG - chr2_3:1490925-1490944 Msa0270200:CDS 20.0%
!!! TTTATTTTCATCTTGTTACT+GGG - chr2_3:1490926-1490945 Msa0270200:CDS 20.0%
!! TATAAGCCATAGAAAATTAA+AGG - chr2_3:1491000-1491019 Msa0270200:CDS 20.0%
!!! AAATTTTTTTGAATTGAGTG+GGG + chr2_3:1491079-1491098 None:intergenic 20.0%
!! CTATTCTTTAATTATCTTTC+AGG - chr2_3:1491457-1491476 Msa0270200:CDS 20.0%
!! AGATTTATATGCATATGATA+TGG + chr2_3:1491509-1491528 None:intergenic 20.0%
!! TAATAAACTGGTAAAAGAAA+AGG + chr2_3:1492487-1492506 None:intergenic 20.0%
!! TTAAGTGCATAATAATAAAC+TGG + chr2_3:1492499-1492518 None:intergenic 20.0%
!! ATTTCAGATGAAATTTCTTT+GGG - chr2_3:1492531-1492550 Msa0270200:intron 20.0%
!!! CTTGTTAATTTTTTTTCTTG+AGG - chr2_3:1492649-1492668 Msa0270200:exon 20.0%
!!! TGTTAATTTTTTTTCTTGAG+GGG - chr2_3:1492651-1492670 Msa0270200:exon 20.0%
!!! CATTTTTTCCACACATTTAT+GGG + chr2_3:1489646-1489665 None:intergenic 25.0%
! AATCATCAACCTTTATGTTT+GGG + chr2_3:1489711-1489730 None:intergenic 25.0%
! ATGAGAATGAAACTAAGAAA+GGG - chr2_3:1489743-1489762 Msa0270200:intron 25.0%
! GTATCACTGATATACAAATA+CGG - chr2_3:1490201-1490220 Msa0270200:intron 25.0%
!!! GACACAAATACTTTTTAACA+GGG - chr2_3:1490356-1490375 Msa0270200:intron 25.0%
! TCTATTTGAAAAAAATAGCC+GGG + chr2_3:1490543-1490562 None:intergenic 25.0%
!! CTTTATTAATGTACTTGTTG+TGG - chr2_3:1490578-1490597 Msa0270200:intron 25.0%
! AGAAAAAATAAAAGGTGATC+TGG - chr2_3:1490707-1490726 Msa0270200:CDS 25.0%
!! TTATTTTCATCTTGTTACTG+GGG - chr2_3:1490927-1490946 Msa0270200:CDS 25.0%
! TTTCTATGGCTTATACAATA+GGG + chr2_3:1490995-1491014 None:intergenic 25.0%
!! TTTTCTATGGCTTATACAAT+AGG + chr2_3:1490996-1491015 None:intergenic 25.0%
! TTTCAGTTATGCTAAAAGTA+AGG + chr2_3:1491142-1491161 None:intergenic 25.0%
!! TAATCGTAATCCGAAATTTT+GGG + chr2_3:1491304-1491323 None:intergenic 25.0%
!! ATAATCGTAATCCGAAATTT+TGG + chr2_3:1491305-1491324 None:intergenic 25.0%
!! CATACTTCATATTGGATTTT+TGG - chr2_3:1491358-1491377 Msa0270200:CDS 25.0%
! CTTTAATTATCTTTCAGGAA+AGG - chr2_3:1491462-1491481 Msa0270200:CDS 25.0%
! ATCATATGATTCTTTCAGTT+TGG - chr2_3:1491871-1491890 Msa0270200:CDS 25.0%
! GATTTCAGATGAAATTTCTT+TGG - chr2_3:1492530-1492549 Msa0270200:intron 25.0%
! CATAAATCAGAACAAACATT+GGG + chr2_3:1492592-1492611 None:intergenic 25.0%
CTGGTTGTTATGAGAATTTA+GGG + chr2_3:1488521-1488540 None:intergenic 30.0%
TCTGGTTGTTATGAGAATTT+AGG + chr2_3:1488522-1488541 None:intergenic 30.0%
!! TTTGGTTTGTAGGTATCTAT+TGG + chr2_3:1488801-1488820 None:intergenic 30.0%
! GTAAAGATTAGGGATCTTTT+GGG + chr2_3:1489023-1489042 None:intergenic 30.0%
! TGTAAAGATTAGGGATCTTT+TGG + chr2_3:1489024-1489043 None:intergenic 30.0%
!!! TTTTTGCTTCATTGAGTTGA+AGG + chr2_3:1489137-1489156 None:intergenic 30.0%
AGGACTTGATTATCAAATGT+AGG - chr2_3:1489182-1489201 Msa0270200:CDS 30.0%
GGACTTGATTATCAAATGTA+GGG - chr2_3:1489183-1489202 Msa0270200:CDS 30.0%
! TTTAGCAACTTTTGTTAGGA+AGG + chr2_3:1489542-1489561 None:intergenic 30.0%
!!! GTGTTTTAGCAACTTTTGTT+AGG + chr2_3:1489546-1489565 None:intergenic 30.0%
!!! GCATTTTTTCCACACATTTA+TGG + chr2_3:1489647-1489666 None:intergenic 30.0%
GAATCATCAACCTTTATGTT+TGG + chr2_3:1489712-1489731 None:intergenic 30.0%
GATGAGAATGAAACTAAGAA+AGG - chr2_3:1489742-1489761 Msa0270200:intron 30.0%
TGAGAATGAAACTAAGAAAG+GGG - chr2_3:1489744-1489763 Msa0270200:intron 30.0%
AGATTTCAAAGCTTCTTCTA+AGG - chr2_3:1489954-1489973 Msa0270200:intron 30.0%
TTATGAAGCAACGAGAAAAT+TGG - chr2_3:1490023-1490042 Msa0270200:intron 30.0%
TGATACTAACACATCCATTA+AGG + chr2_3:1490187-1490206 None:intergenic 30.0%
!! CGACACAAATACTTTTTAAC+AGG - chr2_3:1490355-1490374 Msa0270200:intron 30.0%
TGTTTGTCTGAACTTTATTC+TGG - chr2_3:1490438-1490457 Msa0270200:intron 30.0%
ATCTTTACATTGACATTGAG+TGG - chr2_3:1490753-1490772 Msa0270200:CDS 30.0%
TCTTTACATTGACATTGAGT+GGG - chr2_3:1490754-1490773 Msa0270200:CDS 30.0%
! TATTTTCATCTTGTTACTGG+GGG - chr2_3:1490928-1490947 Msa0270200:CDS 30.0%
!! TATTTTTGCCATTGGTAGTT+CGG - chr2_3:1491098-1491117 Msa0270200:CDS 30.0%
TAGCATAACTGAAATTGATG+AGG - chr2_3:1491148-1491167 Msa0270200:CDS 30.0%
AGCATAACTGAAATTGATGA+GGG - chr2_3:1491149-1491168 Msa0270200:CDS 30.0%
ATGTTCAAACCCCAAAATTT+CGG - chr2_3:1491291-1491310 Msa0270200:CDS 30.0%
! AATCGTAATCCGAAATTTTG+GGG + chr2_3:1491303-1491322 None:intergenic 30.0%
GTGAATACCACAAACAATAA+AGG - chr2_3:1491333-1491352 Msa0270200:CDS 30.0%
TAAAGGCTCATACTTCATAT+TGG - chr2_3:1491350-1491369 Msa0270200:CDS 30.0%
!! GGATTTTTGGAAATCCTAAT+CGG - chr2_3:1491371-1491390 Msa0270200:CDS 30.0%
AATTATCTTTCAGGAAAGGT+TGG - chr2_3:1491466-1491485 Msa0270200:CDS 30.0%
TATTAATGGAGATTTCCAGA+AGG - chr2_3:1491724-1491743 Msa0270200:CDS 30.0%
AAGAGATGCAATAATGTCAA+AGG + chr2_3:1491750-1491769 None:intergenic 30.0%
AATGCTGAAGGATAAAATCA+AGG - chr2_3:1491811-1491830 Msa0270200:CDS 30.0%
ATGATGAAGAGAAGGTAAAT+AGG + chr2_3:1491856-1491875 None:intergenic 30.0%
AGAATCATATGATGAAGAGA+AGG + chr2_3:1491864-1491883 None:intergenic 30.0%
TAGATAATTTCTCAGTCAAC+TGG + chr2_3:1492054-1492073 None:intergenic 30.0%
TATGCACTTAATCTAGATTC+TGG - chr2_3:1492508-1492527 Msa0270200:intron 30.0%
CCATAAATCAGAACAAACAT+TGG + chr2_3:1492593-1492612 None:intergenic 30.0%
CCAATGTTTGTTCTGATTTA+TGG - chr2_3:1492590-1492609 Msa0270200:intron 30.0%
TAACAACCAGACTAAACCAA+TGG - chr2_3:1488531-1488550 Msa0270200:three_prime_UTR 35.0%
TGAATAAACACAGAGAGAGA+CGG + chr2_3:1488629-1488648 None:intergenic 35.0%
GGTTCATCATCAATATCAGT+GGG + chr2_3:1488734-1488753 None:intergenic 35.0%
AGGTTCATCATCAATATCAG+TGG + chr2_3:1488735-1488754 None:intergenic 35.0%
! CTATTGGCTGTATTGTTGTT+GGG + chr2_3:1488785-1488804 None:intergenic 35.0%
! TCTATTGGCTGTATTGTTGT+TGG + chr2_3:1488786-1488805 None:intergenic 35.0%
! CAGATTTAACAACACGCTTT+TGG + chr2_3:1488859-1488878 None:intergenic 35.0%
!! AGATAAGCGTTTTGATGAGA+TGG - chr2_3:1488883-1488902 Msa0270200:CDS 35.0%
ATTCTTGATCTGATCAACAG+TGG + chr2_3:1488912-1488931 None:intergenic 35.0%
ATGCTATCAAGATCAATGAC+TGG - chr2_3:1488930-1488949 Msa0270200:CDS 35.0%
TGCTATCAAGATCAATGACT+GGG - chr2_3:1488931-1488950 Msa0270200:CDS 35.0%
GATCCCTAATCTTTACATCA+AGG - chr2_3:1489027-1489046 Msa0270200:CDS 35.0%
GAGCCTTGATGTAAAGATTA+GGG + chr2_3:1489033-1489052 None:intergenic 35.0%
AGAGCCTTGATGTAAAGATT+AGG + chr2_3:1489034-1489053 None:intergenic 35.0%
GAAGAACAATAAGCAATACG+AGG - chr2_3:1489162-1489181 Msa0270200:CDS 35.0%
AGGTTCAATGATCTCATCAT+CGG + chr2_3:1489269-1489288 None:intergenic 35.0%
AAAAGCTTAGCAAGAAAGAC+AGG - chr2_3:1489386-1489405 Msa0270200:CDS 35.0%
CAAGAAGTTCAAAGAGATTC+TGG - chr2_3:1489465-1489484 Msa0270200:CDS 35.0%
!! CATAAAGGTTGATGATTCTG+TGG - chr2_3:1489714-1489733 Msa0270200:CDS 35.0%
TGAATATGTTGAGAGACTCA+GGG - chr2_3:1489873-1489892 Msa0270200:intron 35.0%
CAATGCTTTCAAGATATTCC+TGG + chr2_3:1489933-1489952 None:intergenic 35.0%
! CAGGAATATCTTGAAAGCAT+TGG - chr2_3:1489931-1489950 Msa0270200:intron 35.0%
! TGAGGAGTTAAAAGGTTTTG+AGG - chr2_3:1490083-1490102 Msa0270200:intron 35.0%
!!! ATTAAGGTCCTGCTATTTTC+CGG + chr2_3:1490171-1490190 None:intergenic 35.0%
! AGTTAGGTCTATGTGCTTTT+CGG - chr2_3:1490388-1490407 Msa0270200:intron 35.0%
TTGTCTGAACTTTATTCTGG+TGG - chr2_3:1490441-1490460 Msa0270200:intron 35.0%
! CTGGAGTCTTTTCATGATAA+CGG + chr2_3:1490506-1490525 None:intergenic 35.0%
CAAATAGATGTCTCATAGCA+TGG - chr2_3:1490555-1490574 Msa0270200:intron 35.0%
ATCAGATACAATGTAAGCAC+CGG + chr2_3:1490615-1490634 None:intergenic 35.0%
!! TTTCTTTAGAGCAGTGACAT+TGG + chr2_3:1490663-1490682 None:intergenic 35.0%
CTTTACATTGACATTGAGTG+GGG - chr2_3:1490755-1490774 Msa0270200:CDS 35.0%
! GTGGGGATTAATCAATTTTG+AGG - chr2_3:1490772-1490791 Msa0270200:CDS 35.0%
TGTTAAACTCATAGAGCATG+AGG - chr2_3:1491033-1491052 Msa0270200:CDS 35.0%
GTTAAACTCATAGAGCATGA+GGG - chr2_3:1491034-1491053 Msa0270200:CDS 35.0%
TTAAACTCATAGAGCATGAG+GGG - chr2_3:1491035-1491054 Msa0270200:CDS 35.0%
AAAAGTAAGGCACACTTTGT+TGG + chr2_3:1491129-1491148 None:intergenic 35.0%
! CATGCTCTTATTTCACTACA+TGG + chr2_3:1491199-1491218 None:intergenic 35.0%
! TCACAGAAAGTTTTCTGTCT+TGG - chr2_3:1491267-1491286 Msa0270200:CDS 35.0%
GTATGAGCCTTTATTGTTTG+TGG + chr2_3:1491343-1491362 None:intergenic 35.0%
! TTTGCCGTATTTCTATCTAC+CGG - chr2_3:1491399-1491418 Msa0270200:CDS 35.0%
AGTGAGAAACAAACATTCAC+CGG - chr2_3:1491653-1491672 Msa0270200:CDS 35.0%
TCCATTAATAAGAACCCTTG+TGG + chr2_3:1491714-1491733 None:intergenic 35.0%
TGACATTATTGCATCTCTTG+AGG - chr2_3:1491751-1491770 Msa0270200:CDS 35.0%
GTGTTCATAGTATTGTCAGT+AGG - chr2_3:1491930-1491949 Msa0270200:CDS 35.0%
TCAGAAATGTTGAACTCTCA+AGG - chr2_3:1492011-1492030 Msa0270200:CDS 35.0%
CAGAAATGTTGAACTCTCAA+GGG - chr2_3:1492012-1492031 Msa0270200:CDS 35.0%
ACTTGTCCTATTCTCAAACA+AGG - chr2_3:1492221-1492240 Msa0270200:CDS 35.0%
TTGTTGGGTTCATCATCAAC+GGG + chr2_3:1488770-1488789 None:intergenic 40.0%
GTTGTTGGGTTCATCATCAA+CGG + chr2_3:1488771-1488790 None:intergenic 40.0%
!! CTTCATTGAGTTGAAGGCTT+TGG + chr2_3:1489131-1489150 None:intergenic 40.0%
AGAAGTTTCAGAATCCGACA+CGG + chr2_3:1489314-1489333 None:intergenic 40.0%
!! GATTCTGAAACTTCTGAGCT+TGG - chr2_3:1489319-1489338 Msa0270200:CDS 40.0%
! TTGCTAAGCTTTTGATCCCA+AGG + chr2_3:1489379-1489398 None:intergenic 40.0%
! TAGCAAGAAAGACAGGCTTT+TGG - chr2_3:1489393-1489412 Msa0270200:CDS 40.0%
AAAAGCCTAGTGAGATCACA+TGG - chr2_3:1489431-1489450 Msa0270200:CDS 40.0%
AAAGCCTAGTGAGATCACAT+GGG - chr2_3:1489432-1489451 Msa0270200:CDS 40.0%
GCTCAGTTTGATGTTAATCC+AGG - chr2_3:1489604-1489623 Msa0270200:CDS 40.0%
AAAATGCGTGCAGAATATGC+TGG - chr2_3:1489660-1489679 Msa0270200:CDS 40.0%
AAGAAAGGGGATGACTATGA+CGG - chr2_3:1489757-1489776 Msa0270200:intron 40.0%
CTGCAAGCTCTTGAAAAACT+CGG + chr2_3:1489833-1489852 None:intergenic 40.0%
TCAACATATTCACGTGTGTG+GGG + chr2_3:1489865-1489884 None:intergenic 40.0%
CTCAACATATTCACGTGTGT+GGG + chr2_3:1489866-1489885 None:intergenic 40.0%
TCTCAACATATTCACGTGTG+TGG + chr2_3:1489867-1489886 None:intergenic 40.0%
GTGAATATGTTGAGAGACTC+AGG - chr2_3:1489872-1489891 Msa0270200:intron 40.0%
TGTGCAAGAACAACAAACTG+AGG + chr2_3:1489904-1489923 None:intergenic 40.0%
!! TTCTAAGGTAGCCTTGAAGA+GGG - chr2_3:1489969-1489988 Msa0270200:intron 40.0%
AATGAGTTCAACCCTCTTCA+AGG + chr2_3:1489983-1490002 None:intergenic 40.0%
CATTTACTACAAACCGCATG+AGG - chr2_3:1489999-1490018 Msa0270200:intron 40.0%
GTTGCTTCATAAACCTCATG+CGG + chr2_3:1490015-1490034 None:intergenic 40.0%
!! AGATAATGGAGAGATGAGTG+AGG - chr2_3:1490065-1490084 Msa0270200:intron 40.0%
GAGATGAGTGAGGAGTTAAA+AGG - chr2_3:1490075-1490094 Msa0270200:intron 40.0%
!!! TTAAGGTCCTGCTATTTTCC+GGG + chr2_3:1490170-1490189 None:intergenic 40.0%
GGAAAATAGCAGGACCTTAA+TGG - chr2_3:1490170-1490189 Msa0270200:intron 40.0%
CAAACTCATCAAGAAGAGCA+TGG + chr2_3:1490272-1490291 None:intergenic 40.0%
ACTCATAAGCAACAGATCAC+GGG + chr2_3:1490301-1490320 None:intergenic 40.0%
GACTCATAAGCAACAGATCA+CGG + chr2_3:1490302-1490321 None:intergenic 40.0%
GCAAGAAAATGTTCACCACA+TGG - chr2_3:1490326-1490345 Msa0270200:intron 40.0%
TTTGTGTCGAAATGTCCATG+TGG + chr2_3:1490344-1490363 None:intergenic 40.0%
! GTTAGGTCTATGTGCTTTTC+GGG - chr2_3:1490389-1490408 Msa0270200:intron 40.0%
CTGAACTTTATTCTGGTGGA+CGG - chr2_3:1490445-1490464 Msa0270200:intron 40.0%
! TGAACTTTATTCTGGTGGAC+GGG - chr2_3:1490446-1490465 Msa0270200:intron 40.0%
TCATGAAAAGACTCCAGAAC+AGG - chr2_3:1490509-1490528 Msa0270200:intron 40.0%
GAATTGAGTGGGGTAAGAAA+AGG + chr2_3:1491069-1491088 None:intergenic 40.0%
! TTGCCGTATTTCTATCTACC+GGG - chr2_3:1491400-1491419 Msa0270200:CDS 40.0%
TGACCCGGTAGATAGAAATA+CGG + chr2_3:1491406-1491425 None:intergenic 40.0%
AGGAAAGGTTGGAAAGAAGA+CGG - chr2_3:1491477-1491496 Msa0270200:CDS 40.0%
GCATATAAATCTTGAGCTCC+TGG - chr2_3:1491517-1491536 Msa0270200:CDS 40.0%
!! ATGTAAGATGCACTGATTCC+AGG + chr2_3:1491538-1491557 None:intergenic 40.0%
ACGCTTAGCATCATGAACAT+TGG + chr2_3:1491594-1491613 None:intergenic 40.0%
AACTGTCAGGGATCATGTTA+TGG - chr2_3:1491685-1491704 Msa0270200:CDS 40.0%
GCCACAAGGGTTCTTATTAA+TGG - chr2_3:1491710-1491729 Msa0270200:CDS 40.0%
CAATAATGTCAAAGGCCTTC+TGG + chr2_3:1491742-1491761 None:intergenic 40.0%
TTATTGCATCTCTTGAGGTG+TGG - chr2_3:1491756-1491775 Msa0270200:CDS 40.0%
!! ATCCTTCAGCATTTCTAGCA+CGG + chr2_3:1491804-1491823 None:intergenic 40.0%
GCTGAAGGATAAAATCAAGG+AGG - chr2_3:1491814-1491833 Msa0270200:CDS 40.0%
GAAGGATAAAATCAAGGAGG+AGG - chr2_3:1491817-1491836 Msa0270200:CDS 40.0%
CTGACAATACTATGAACACG+AGG + chr2_3:1491929-1491948 None:intergenic 40.0%
CAGTAGGATGATGATCAATG+AGG - chr2_3:1491946-1491965 Msa0270200:CDS 40.0%
CTGAAAATAATGCACCCAGT+TGG + chr2_3:1491995-1492014 None:intergenic 40.0%
ATGAAAGAGCTACAGAAGCA+AGG - chr2_3:1492089-1492108 Msa0270200:CDS 40.0%
TCCTATTCTCAAACAAGGCA+AGG - chr2_3:1492226-1492245 Msa0270200:CDS 40.0%
!! CTTCGTGTTAGTTTGTTGTG+TGG - chr2_3:1492676-1492695 Msa0270200:five_prime_UTR 40.0%
!!! GGTTTTGTTTTGCGCGATGA+AGG + chr2_3:1488500-1488519 None:intergenic 45.0%
!! TCGAAGCCATTGGTTTAGTC+TGG + chr2_3:1488540-1488559 None:intergenic 45.0%
AACCAATGGCTTCGAGATTC+TGG - chr2_3:1488545-1488564 Msa0270200:three_prime_UTR 45.0%
! TCAACGGGTTCAGTATCGTT+AGG + chr2_3:1488755-1488774 None:intergenic 45.0%
!! CAACAACGGGTTTGGTTTGT+AGG + chr2_3:1488811-1488830 None:intergenic 45.0%
! ACTGTCATCAACAACGGGTT+TGG + chr2_3:1488819-1488838 None:intergenic 45.0%
TCGTCACTGTCATCAACAAC+GGG + chr2_3:1488824-1488843 None:intergenic 45.0%
GTCGTCACTGTCATCAACAA+CGG + chr2_3:1488825-1488844 None:intergenic 45.0%
GCTTGAAGATTTCCTTGCTC+AGG - chr2_3:1489060-1489079 Msa0270200:CDS 45.0%
TATTAGCAGAAGCCTGAGCA+AGG + chr2_3:1489075-1489094 None:intergenic 45.0%
TGCTCAGGCTTCTGCTAATA+AGG - chr2_3:1489075-1489094 Msa0270200:CDS 45.0%
! TTGAAGGCTTTGGCATTGCT+GGG + chr2_3:1489121-1489140 None:intergenic 45.0%
TCATTGAACCTGATCAGCTC+AGG - chr2_3:1489278-1489297 Msa0270200:CDS 45.0%
GAAGTTTCAGAATCCGACAC+GGG + chr2_3:1489313-1489332 None:intergenic 45.0%
!! CTTCTGAGCTTGGTAATGAC+AGG - chr2_3:1489329-1489348 Msa0270200:CDS 45.0%
! TCAAAGAGATTCTGGAAGCC+AGG - chr2_3:1489473-1489492 Msa0270200:CDS 45.0%
! CAAAGAGATTCTGGAAGCCA+GGG - chr2_3:1489474-1489493 Msa0270200:CDS 45.0%
! AAAGAGATTCTGGAAGCCAG+GGG - chr2_3:1489475-1489494 Msa0270200:CDS 45.0%
! GCTGCAGATTCTTTTCAGTG+TGG - chr2_3:1489576-1489595 Msa0270200:CDS 45.0%
ATGTTAATCCAGGCCTCAGT+GGG - chr2_3:1489614-1489633 Msa0270200:CDS 45.0%
GGCATATGCCCATAAATGTG+TGG - chr2_3:1489635-1489654 Msa0270200:CDS 45.0%
AAGTTGCCCCAGACATGAAT+GGG + chr2_3:1489784-1489803 None:intergenic 45.0%
TAAGTTGCCCCAGACATGAA+TGG + chr2_3:1489785-1489804 None:intergenic 45.0%
TGTTCTTGCACAGAATGTCC+AGG - chr2_3:1489912-1489931 Msa0270200:intron 45.0%
!! CTTCTAAGGTAGCCTTGAAG+AGG - chr2_3:1489968-1489987 Msa0270200:intron 45.0%
ATGACCGTAGAGGGAGATAA+TGG - chr2_3:1490051-1490070 Msa0270200:intron 45.0%
CTCTCCATTATCTCCCTCTA+CGG + chr2_3:1490058-1490077 None:intergenic 45.0%
AGTTCCGGGGTAACAACAAA+CGG + chr2_3:1490126-1490145 None:intergenic 45.0%
AACAGGGCTATGTCACAGTT+AGG - chr2_3:1490372-1490391 Msa0270200:intron 45.0%
!!! GTCTATGTGCTTTTCGGGTT+GGG - chr2_3:1490394-1490413 Msa0270200:intron 45.0%
CCAGAACAGGTACTAAATCC+CGG - chr2_3:1490522-1490541 Msa0270200:intron 45.0%
TGTTGTGGTCAAGTGCATAC+CGG - chr2_3:1490593-1490612 Msa0270200:intron 45.0%
TTTCATCTTGTTACTGGGGG+AGG - chr2_3:1490931-1490950 Msa0270200:CDS 45.0%
TTCATCTTGTTACTGGGGGA+GGG - chr2_3:1490932-1490951 Msa0270200:CDS 45.0%
! TTGCCATTGGTAGTTCGGTT+TGG - chr2_3:1491103-1491122 Msa0270200:CDS 45.0%
! TACGGCAAAAGTTGCCGATT+AGG + chr2_3:1491388-1491407 None:intergenic 45.0%
GATTAAACCCTCACATGACC+CGG + chr2_3:1491421-1491440 None:intergenic 45.0%
TCTTACATCTGCTATGCTGC+TGG - chr2_3:1491550-1491569 Msa0270200:CDS 45.0%
! TGAACATTGGCTGCCATGTT+GGG + chr2_3:1491581-1491600 None:intergenic 45.0%
! ATGAACATTGGCTGCCATGT+TGG + chr2_3:1491582-1491601 None:intergenic 45.0%
TCTCACTGACCTCAAGTAAG+CGG + chr2_3:1491640-1491659 None:intergenic 45.0%
ACATGATCCCTGACAGTTTC+AGG + chr2_3:1491683-1491702 None:intergenic 45.0%
ATCATGTTATGGCTGCCACA+AGG - chr2_3:1491696-1491715 Msa0270200:CDS 45.0%
TCATGTTATGGCTGCCACAA+GGG - chr2_3:1491697-1491716 Msa0270200:CDS 45.0%
AGAGCTACAGAAGCAAGGTT+AGG - chr2_3:1492094-1492113 Msa0270200:CDS 45.0%
!! GCCTTGCCTTGTTTGAGAAT+AGG + chr2_3:1492230-1492249 None:intergenic 45.0%
GCATTATCGTTCAGTCAAGC+TGG - chr2_3:1492280-1492299 Msa0270200:CDS 45.0%
TTATCGTTCAGTCAAGCTGG+TGG - chr2_3:1492283-1492302 Msa0270200:CDS 45.0%
TATCGTTCAGTCAAGCTGGT+GGG - chr2_3:1492284-1492303 Msa0270200:CDS 45.0%
AGAATTCAGGGAGGACTCAA+GGG - chr2_3:1492353-1492372 Msa0270200:CDS 45.0%
TCAAGGGGGTTCAACATTGA+GGG - chr2_3:1492369-1492388 Msa0270200:CDS 45.0%
CAGAACAAACATTGGGAGCT+GGG + chr2_3:1492585-1492604 None:intergenic 45.0%
TCAGAACAAACATTGGGAGC+TGG + chr2_3:1492586-1492605 None:intergenic 45.0%
!! TTATTATTATTATTATTCTT+AGG - chr2_3:1488682-1488701 Msa0270200:three_prime_UTR 5.0%
!! TATTATTATTATTATTCTTA+GGG - chr2_3:1488683-1488702 Msa0270200:three_prime_UTR 5.0%
GTCCAGAATCTCGAAGCCAT+TGG + chr2_3:1488550-1488569 None:intergenic 50.0%
GCTGGGACTCATCTTCTTCT+TGG + chr2_3:1489104-1489123 None:intergenic 50.0%
! GTTGAAGGCTTTGGCATTGC+TGG + chr2_3:1489122-1489141 None:intergenic 50.0%
GGAAAAGGATGACGAGGATG+AGG - chr2_3:1489225-1489244 Msa0270200:CDS 50.0%
!! TGATGATGGCGATGCTCCTT+GGG - chr2_3:1489360-1489379 Msa0270200:CDS 50.0%
GTGTCCCATGTGATCTCACT+AGG + chr2_3:1489439-1489458 None:intergenic 50.0%
GGGAACTGGAAGGTTTGAAC+AGG - chr2_3:1489504-1489523 Msa0270200:CDS 50.0%
AGAATCTGCAGCTTCTGAGC+AGG + chr2_3:1489568-1489587 None:intergenic 50.0%
GATGTTAATCCAGGCCTCAG+TGG - chr2_3:1489613-1489632 Msa0270200:CDS 50.0%
TTATGGGCATATGCCCACTG+AGG + chr2_3:1489630-1489649 None:intergenic 50.0%
CGTGCAGCACCCAAACATAA+AGG - chr2_3:1489699-1489718 Msa0270200:CDS 50.0%
!! ATGACGGACCCATTCATGTC+TGG - chr2_3:1489773-1489792 Msa0270200:intron 50.0%
! TGACGGACCCATTCATGTCT+GGG - chr2_3:1489774-1489793 Msa0270200:intron 50.0%
ATTGGCTGAGATGACCGTAG+AGG - chr2_3:1490041-1490060 Msa0270200:intron 50.0%
TTGGCTGAGATGACCGTAGA+GGG - chr2_3:1490042-1490061 Msa0270200:intron 50.0%
!! TGCTCCGTTTGTTGTTACCC+CGG - chr2_3:1490119-1490138 Msa0270200:intron 50.0%
TGTTGTTACCCCGGAACTTG+TGG - chr2_3:1490128-1490147 Msa0270200:intron 50.0%
!!! CTGCTATTTTCCGGGAAGGT+GGG + chr2_3:1490162-1490181 None:intergenic 50.0%
!!! GGTCTATGTGCTTTTCGGGT+TGG - chr2_3:1490393-1490412 Msa0270200:intron 50.0%
! TTATTCTGGTGGACGGGTGA+AGG - chr2_3:1490452-1490471 Msa0270200:intron 50.0%
GTGAAGGAATTGCTTGCGCA+AGG - chr2_3:1490468-1490487 Msa0270200:intron 50.0%
CCGGGATTTAGTACCTGTTC+TGG + chr2_3:1490525-1490544 None:intergenic 50.0%
TCATCTTGTTACTGGGGGAG+GGG - chr2_3:1490933-1490952 Msa0270200:CDS 50.0%
TGGCCAAACCGAACTACCAA+TGG + chr2_3:1491109-1491128 None:intergenic 50.0%
TCTATCTACCGGGTCATGTG+AGG - chr2_3:1491410-1491429 Msa0270200:CDS 50.0%
CTATCTACCGGGTCATGTGA+GGG - chr2_3:1491411-1491430 Msa0270200:CDS 50.0%
GAATTTCCGCCGCTTACTTG+AGG - chr2_3:1491628-1491647 Msa0270200:CDS 50.0%
TGATCCCTGACAGTTTCAGG+AGG + chr2_3:1491680-1491699 None:intergenic 50.0%
CACCGTGCTAGAAATGCTGA+AGG - chr2_3:1491799-1491818 Msa0270200:CDS 50.0%
!! AAATCAAGGAGGAGGCGCTT+AGG - chr2_3:1491825-1491844 Msa0270200:CDS 50.0%
ATGAGGAGCTTCATGCAAGC+TGG - chr2_3:1491963-1491982 Msa0270200:CDS 50.0%
TGAGGAGCTTCATGCAAGCT+GGG - chr2_3:1491964-1491983 Msa0270200:CDS 50.0%
! TGTTGAACTCTCAAGGGTGC+AGG - chr2_3:1492018-1492037 Msa0270200:CDS 50.0%
GCTACAGAAGCAAGGTTAGG+CGG - chr2_3:1492097-1492116 Msa0270200:CDS 50.0%
TCTCAAACAAGGCAAGGCAG+TGG - chr2_3:1492232-1492251 Msa0270200:CDS 50.0%
GAGGCGGCTATCAGAATTCA+GGG - chr2_3:1492341-1492360 Msa0270200:CDS 50.0%
CAGAATTCAGGGAGGACTCA+AGG - chr2_3:1492352-1492371 Msa0270200:CDS 50.0%
GAATTCAGGGAGGACTCAAG+GGG - chr2_3:1492354-1492373 Msa0270200:CDS 50.0%
AATTCAGGGAGGACTCAAGG+GGG - chr2_3:1492355-1492374 Msa0270200:CDS 50.0%
CTCAAGGGGGTTCAACATTG+AGG - chr2_3:1492368-1492387 Msa0270200:CDS 50.0%
CAAGGGGGTTCAACATTGAG+GGG - chr2_3:1492370-1492389 Msa0270200:CDS 50.0%
!! GCGGGTAGAAGTATCTACGT+GGG + chr2_3:1492398-1492417 None:intergenic 50.0%
!! TGCGGGTAGAAGTATCTACG+TGG + chr2_3:1492399-1492418 None:intergenic 50.0%
CGTAGATACTTCTACCCGCA+TGG - chr2_3:1492399-1492418 Msa0270200:CDS 50.0%
!! TACCCGCATGGTTAGCCTTA+GGG - chr2_3:1492411-1492430 Msa0270200:CDS 50.0%
GGCTTCGAGATTCTGGACAC+AGG - chr2_3:1488552-1488571 Msa0270200:three_prime_UTR 55.0%
GACAGTGACGACGACGATGA+TGG - chr2_3:1488833-1488852 Msa0270200:CDS 55.0%
TAGGGAGAGTCCTGAGAGTG+AGG - chr2_3:1489201-1489220 Msa0270200:CDS 55.0%
AGGGAGAGTCCTGAGAGTGA+GGG - chr2_3:1489202-1489221 Msa0270200:CDS 55.0%
TCCTGAGAGTGAGGGGGAAA+AGG - chr2_3:1489210-1489229 Msa0270200:CDS 55.0%
! TCCTTTTCCCCCTCACTCTC+AGG + chr2_3:1489214-1489233 None:intergenic 55.0%
TGAGGGGGAAAAGGATGACG+AGG - chr2_3:1489219-1489238 Msa0270200:CDS 55.0%
ACCTGATCAGCTCAGGAAGC+CGG - chr2_3:1489285-1489304 Msa0270200:CDS 55.0%
!! CTTGGTAATGACAGGCCTCC+TGG - chr2_3:1489337-1489356 Msa0270200:CDS 55.0%
!! GTGATGATGGCGATGCTCCT+TGG - chr2_3:1489359-1489378 Msa0270200:CDS 55.0%
GACGGACCCATTCATGTCTG+GGG - chr2_3:1489775-1489794 Msa0270200:intron 55.0%
!!! CCTGCTATTTTCCGGGAAGG+TGG + chr2_3:1490163-1490182 None:intergenic 55.0%
CCACCTTCCCGGAAAATAGC+AGG - chr2_3:1490160-1490179 Msa0270200:intron 55.0%
!!! GGTCCTGCTATTTTCCGGGA+AGG + chr2_3:1490166-1490185 None:intergenic 55.0%
!!! ATGTGCTTTTCGGGTTGGGC+TGG - chr2_3:1490398-1490417 Msa0270200:intron 55.0%
CATCTTGTTACTGGGGGAGG+GGG - chr2_3:1490934-1490953 Msa0270200:CDS 55.0%
ATAGAGCATGAGGGGAAGCG+TGG - chr2_3:1491043-1491062 Msa0270200:CDS 55.0%
GCTGCTGGAAGTTCCCAACA+TGG - chr2_3:1491565-1491584 Msa0270200:CDS 55.0%
CACTGACCTCAAGTAAGCGG+CGG + chr2_3:1491637-1491656 None:intergenic 55.0%
CCTGACAGTTTCAGGAGGAC+CGG + chr2_3:1491675-1491694 None:intergenic 55.0%
CGGTCCTCCTGAAACTGTCA+GGG - chr2_3:1491673-1491692 Msa0270200:CDS 55.0%
CAAGCTGGGATCAGCCAACT+GGG - chr2_3:1491978-1491997 Msa0270200:CDS 55.0%
! ACTCTCAAGGGTGCAGGCTT+TGG - chr2_3:1492024-1492043 Msa0270200:CDS 55.0%
ACAGAAGCAAGGTTAGGCGG+CGG - chr2_3:1492100-1492119 Msa0270200:CDS 55.0%
TGCCTCCAAGGCGAAGAGAT+GGG - chr2_3:1492134-1492153 Msa0270200:CDS 55.0%
!! GGTGGTAGTGGAACGTCTTC+AGG - chr2_3:1492184-1492203 Msa0270200:CDS 55.0%
!! GGTAGTGGAACGTCTTCAGG+TGG - chr2_3:1492187-1492206 Msa0270200:CDS 55.0%
GGCAGTGGACGTACAGGATA+CGG - chr2_3:1492247-1492266 Msa0270200:CDS 55.0%
AGTGGACGTACAGGATACGG+TGG - chr2_3:1492250-1492269 Msa0270200:CDS 55.0%
TTCAGTCAAGCTGGTGGGAG+TGG - chr2_3:1492289-1492308 Msa0270200:CDS 55.0%
! GTGGCGGCTATTCTAGAGGA+CGG - chr2_3:1492308-1492327 Msa0270200:CDS 55.0%
! TGGCGGCTATTCTAGAGGAC+GGG - chr2_3:1492309-1492328 Msa0270200:CDS 55.0%
TCTAGAGGACGGGGAACGAT+TGG - chr2_3:1492319-1492338 Msa0270200:CDS 55.0%
GGAGGCGGCTATCAGAATTC+AGG - chr2_3:1492340-1492359 Msa0270200:CDS 55.0%
GCGGCTATCAGAATTCAGGG+AGG - chr2_3:1492344-1492363 Msa0270200:CDS 55.0%
!! CTACCCGCATGGTTAGCCTT+AGG - chr2_3:1492410-1492429 Msa0270200:CDS 55.0%
!! ACCCGCATGGTTAGCCTTAG+GGG - chr2_3:1492412-1492431 Msa0270200:CDS 55.0%
TCCCCTAAGGCTAACCATGC+GGG + chr2_3:1492416-1492435 None:intergenic 55.0%
CTCCCCTAAGGCTAACCATG+CGG + chr2_3:1492417-1492436 None:intergenic 55.0%
GTCAAGCACGAACTCCCCTA+AGG + chr2_3:1492429-1492448 None:intergenic 55.0%
CAAACATTGGGAGCTGGGAG+AGG + chr2_3:1492580-1492599 None:intergenic 55.0%
GGGAGAGTCCTGAGAGTGAG+GGG - chr2_3:1489203-1489222 Msa0270200:CDS 60.0%
GGAGAGTCCTGAGAGTGAGG+GGG - chr2_3:1489204-1489223 Msa0270200:CDS 60.0%
TCCGGCTTCCTGAGCTGATC+AGG + chr2_3:1489289-1489308 None:intergenic 60.0%
TCAGAATCCGACACGGGCTC+CGG + chr2_3:1489307-1489326 None:intergenic 60.0%
! GACAGGCCTCCTGGTGATGA+TGG - chr2_3:1489346-1489365 Msa0270200:CDS 60.0%
GCATCGCCATCATCACCAGG+AGG + chr2_3:1489355-1489374 None:intergenic 60.0%
!! GGAGCATCGCCATCATCACC+AGG + chr2_3:1489358-1489377 None:intergenic 60.0%
! AGATTCTGGAAGCCAGGGGC+AGG - chr2_3:1489479-1489498 Msa0270200:CDS 60.0%
TTACCCCGGAACTTGTGGCG+CGG - chr2_3:1490133-1490152 Msa0270200:intron 60.0%
TTTCCGCGCCACAAGTTCCG+GGG + chr2_3:1490139-1490158 None:intergenic 60.0%
GTTTCCGCGCCACAAGTTCC+GGG + chr2_3:1490140-1490159 None:intergenic 60.0%
GGTTTCCGCGCCACAAGTTC+CGG + chr2_3:1490141-1490160 None:intergenic 60.0%
!! GGGCTGGTTTCTGAAGCGCA+TGG - chr2_3:1490414-1490433 Msa0270200:intron 60.0%
CCGGTCCTCCTGAAACTGTC+AGG - chr2_3:1491672-1491691 Msa0270200:CDS 60.0%
GCAAGCTGGGATCAGCCAAC+TGG - chr2_3:1491977-1491996 Msa0270200:CDS 60.0%
AAGCAAGGTTAGGCGGCGGT+GGG - chr2_3:1492104-1492123 Msa0270200:CDS 60.0%
!! GTGGGTTGGATCTGCCTCCA+AGG - chr2_3:1492122-1492141 Msa0270200:CDS 60.0%
CTGCCTCCAAGGCGAAGAGA+TGG - chr2_3:1492133-1492152 Msa0270200:CDS 60.0%
TGCCCATCTCTTCGCCTTGG+AGG + chr2_3:1492139-1492158 None:intergenic 60.0%
TCCAAGGCGAAGAGATGGGC+AGG - chr2_3:1492138-1492157 Msa0270200:CDS 60.0%
TCCTGCCCATCTCTTCGCCT+TGG + chr2_3:1492142-1492161 None:intergenic 60.0%
GATTATGCCGCTGCAGCTGC+TGG - chr2_3:1492160-1492179 Msa0270200:CDS 60.0%
GTGGAACGTCTTCAGGTGGC+AGG - chr2_3:1492191-1492210 Msa0270200:CDS 60.0%
GAACGTCTTCAGGTGGCAGG+TGG - chr2_3:1492194-1492213 Msa0270200:CDS 60.0%
AGGCAAGGCAGTGGACGTAC+AGG - chr2_3:1492241-1492260 Msa0270200:CDS 60.0%
GGACGTACAGGATACGGTGG+AGG - chr2_3:1492253-1492272 Msa0270200:CDS 60.0%
AGTCAAGCTGGTGGGAGTGG+CGG - chr2_3:1492292-1492311 Msa0270200:CDS 60.0%
GGGAGTGGCGGCTATTCTAG+AGG - chr2_3:1492304-1492323 Msa0270200:CDS 60.0%
! GGCGGCTATTCTAGAGGACG+GGG - chr2_3:1492310-1492329 Msa0270200:CDS 60.0%
AGAGGACGGGGAACGATTGG+AGG - chr2_3:1492322-1492341 Msa0270200:CDS 60.0%
CATTGGGAGCTGGGAGAGGA+GGG + chr2_3:1492576-1492595 None:intergenic 60.0%
ACATTGGGAGCTGGGAGAGG+AGG + chr2_3:1492577-1492596 None:intergenic 60.0%
TCTGGAAGCCAGGGGCAGGA+AGG - chr2_3:1489483-1489502 Msa0270200:CDS 65.0%
CTGGAAGCCAGGGGCAGGAA+GGG - chr2_3:1489484-1489503 Msa0270200:CDS 65.0%
TCCAGTTCCCTTCCTGCCCC+TGG + chr2_3:1489494-1489513 None:intergenic 65.0%
GGGGCAGGAAGGGAACTGGA+AGG - chr2_3:1489494-1489513 Msa0270200:CDS 65.0%
GGCATATGCCCACTGAGGCC+TGG + chr2_3:1489625-1489644 None:intergenic 65.0%
GAAGCAAGGTTAGGCGGCGG+TGG - chr2_3:1492103-1492122 Msa0270200:CDS 65.0%
AAGGTTAGGCGGCGGTGGGT+TGG - chr2_3:1492108-1492127 Msa0270200:CDS 65.0%
TATGCCGCTGCAGCTGCTGG+TGG - chr2_3:1492163-1492182 Msa0270200:CDS 65.0%
ACCACCACCAGCAGCTGCAG+CGG + chr2_3:1492170-1492189 None:intergenic 65.0%
!! GCAGCTGCTGGTGGTGGTAG+TGG - chr2_3:1492172-1492191 Msa0270200:CDS 65.0%
GGACGGGGAACGATTGGAGG+CGG - chr2_3:1492325-1492344 Msa0270200:CDS 65.0%
CAGGAAGCCGGAGCCCGTGT+CGG - chr2_3:1489297-1489316 Msa0270200:CDS 70.0%
GCCAGGGGCAGGAAGGGAAC+TGG - chr2_3:1489490-1489509 Msa0270200:CDS 70.0%
GGCGCGGAAACCCACCTTCC+CGG - chr2_3:1490149-1490168 Msa0270200:intron 70.0%
GCCGCTGCAGCTGCTGGTGG+TGG - chr2_3:1492166-1492185 Msa0270200:CDS 75.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 1488471 1492744 1488471 ID=Msa0270200;Name=Msa0270200
chr2_3 mRNA 1488471 1492744 1488471 ID=Msa0270200-mRNA-1;Parent=Msa0270200;Name=Msa0270200-mRNA-1;_AED=0.01;_eAED=0.01;_QI=79|1|1|1|1|1|3|297|939
chr2_3 exon 1488471 1489736 1488471 ID=Msa0270200-mRNA-1:exon:685;Parent=Msa0270200-mRNA-1
chr2_3 exon 1490685 1492511 1490685 ID=Msa0270200-mRNA-1:exon:684;Parent=Msa0270200-mRNA-1
chr2_3 exon 1492642 1492744 1492642 ID=Msa0270200-mRNA-1:exon:683;Parent=Msa0270200-mRNA-1
chr2_3 five_prime_UTR 1492666 1492744 1492666 ID=Msa0270200-mRNA-1:five_prime_utr;Parent=Msa0270200-mRNA-1
chr2_3 CDS 1492642 1492665 1492642 ID=Msa0270200-mRNA-1:cds;Parent=Msa0270200-mRNA-1
chr2_3 CDS 1490685 1492511 1490685 ID=Msa0270200-mRNA-1:cds;Parent=Msa0270200-mRNA-1
chr2_3 CDS 1488768 1489736 1488768 ID=Msa0270200-mRNA-1:cds;Parent=Msa0270200-mRNA-1
chr2_3 three_prime_UTR 1488471 1488767 1488471 ID=Msa0270200-mRNA-1:three_prime_utr;Parent=Msa0270200-mRNA-1
Gene Sequence

>Msa0270200

ATGGCTTCGAGATTCTGGACACAGGGTAACAGCGATAGTGACGATGACGAACCCACTGATATTGATGATGAACCTAACGATACTGAACCCGTTGATGATGAACCCAACAACAATACAGCCAATAGATACCTACAAACCAAACCCGTTGTTGATGACAGTGACGACGACGATGATGGCCAAAAGCGTGTTGTTAAATCTGCTAAAGATAAGCGTTTTGATGAGATGGCTTCCACTGTTGATCAGATCAAGAATGCTATCAAGATCAATGACTGGGTCAGCTTGCAAGAGAGCTTCGACAAGATCAACAAACAGCTCGAGAAAGTTATGCGTGTTATCGAGTCCCAAAAGATCCCTAATCTTTACATCAAGGCTCTTGTTATGCTTGAAGATTTCCTTGCTCAGGCTTCTGCTAATAAGGATGCCAAGAAGAAGATGAGTCCCAGCAATGCCAAAGCCTTCAACTCAATGAAGCAAAAATTGAAGAAGAACAATAAGCAATACGAGGACTTGATTATCAAATGTAGGGAGAGTCCTGAGAGTGAGGGGGAAAAGGATGACGAGGATGAGGACTCTGACGAATACGAGACCGATGATGAGATCATTGAACCTGATCAGCTCAGGAAGCCGGAGCCCGTGTCGGATTCTGAAACTTCTGAGCTTGGTAATGACAGGCCTCCTGGTGATGATGGCGATGCTCCTTGGGATCAAAAGCTTAGCAAGAAAGACAGGCTTTTGGAGAAAATGTTCATGAAAAAGCCTAGTGAGATCACATGGGACACTGTTAACAAGAAGTTCAAAGAGATTCTGGAAGCCAGGGGCAGGAAGGGAACTGGAAGGTTTGAACAGGTTGAGCAGCTTACCTTCCTAACAAAAGTTGCTAAAACACCTGCTCAGAAGCTGCAGATTCTTTTCAGTGTGGTTTCTGCTCAGTTTGATGTTAATCCAGGCCTCAGTGGGCATATGCCCATAAATGTGTGGAAAAAATGCGTGCAGAATATGCTGGTCATTCTTGATATTCTCGTGCAGCACCCAAACATAAAGGTTGATGATTCTGTGGAACTAGATGAGAATGAAACTAAGAAAGGGGATGACTATGACGGACCCATTCATGTCTGGGGCAACTTAGTTGCTTTCTTAGAAAAAATAGATGCCGAGTTTTTCAAGAGCTTGCAGTGCATTGATCCCCACACACGTGAATATGTTGAGAGACTCAGGGATGAGCCTCAGTTTGTTGTTCTTGCACAGAATGTCCAGGAATATCTTGAAAGCATTGGAGATTTCAAAGCTTCTTCTAAGGTAGCCTTGAAGAGGGTTGAACTCATTTACTACAAACCGCATGAGGTTTATGAAGCAACGAGAAAATTGGCTGAGATGACCGTAGAGGGAGATAATGGAGAGATGAGTGAGGAGTTAAAAGGTTTTGAGGATACAAGAATTTCTGCTCCGTTTGTTGTTACCCCGGAACTTGTGGCGCGGAAACCCACCTTCCCGGAAAATAGCAGGACCTTAATGGATGTGTTAGTATCACTGATATACAAATACGGAGATGAGCGCACTAAAGCACGTGCAATGCTTTGTGATATATATCACCATGCTCTTCTTGATGAGTTTGCAGTCGCCCGTGATCTGTTGCTTATGAGTCATTTGCAAGAAAATGTTCACCACATGGACATTTCGACACAAATACTTTTTAACAGGGCTATGTCACAGTTAGGTCTATGTGCTTTTCGGGTTGGGCTGGTTTCTGAAGCGCATGGCTGTTTGTCTGAACTTTATTCTGGTGGACGGGTGAAGGAATTGCTTGCGCAAGGAGTTTCACAGAGCCGTTATCATGAAAAGACTCCAGAACAGGAAAGGTTGGAAAGAAGACGGCAGATGCCATATCATATGCATATAAATCTTGAGCTCCTGGAATCAGTGCATCTTACATCTGCTATGCTGCTGGAAGTTCCCAACATGGCAGCCAATGTTCATGATGCTAAGCGTAAGATCATCAGTAAGAATTTCCGCCGCTTACTTGAGGTCAGTGAGAAACAAACATTCACCGGTCCTCCTGAAACTGTCAGGGATCATGTTATGGCTGCCACAAGGGTTCTTATTAATGGAGATTTCCAGAAGGCCTTTGACATTATTGCATCTCTTGAGGTGTGGAAATTTGTGAAAAATCGTGACACCGTGCTAGAAATGCTGAAGGATAAAATCAAGGAGGAGGCGCTTAGGACATACCTATTTACCTTCTCTTCATCATATGATTCTTTCAGTTTGGATCAGCTCACAAATTTTTTTGATCTCTCTCTTCCTCGTGTTCATAGTATTGTCAGTAGGATGATGATCAATGAGGAGCTTCATGCAAGCTGGGATCAGCCAACTGGGTGCATTATTTTCAGAAATGTTGAACTCTCAAGGGTGCAGGCTTTGGCATTCCAGTTGACTGAGAAATTATCTATCGTTGCAGAGAGTAATGAAAGAGCTACAGAAGCAAGGTTAGGCGGCGGTGGGTTGGATCTGCCTCCAAGGCGAAGAGATGGGCAGGATTATGCCGCTGCAGCTGCTGGTGGTGGTAGTGGAACGTCTTCAGGTGGCAGGTGGCAAGACTTGTCCTATTCTCAAACAAGGCAAGGCAGTGGACGTACAGGATACGGTGGAGGAAGAGCATTATCGTTCAGTCAAGCTGGTGGGAGTGGCGGCTATTCTAGAGGACGGGGAACGATTGGAGGCGGCTATCAGAATTCAGGGAGGACTCAAGGGGGTTCAACATTGAGGGGAACCCACGTAGATACTTCTACCCGCATGGTTAGCCTTAGGGGAGTTCGTGCTTGA

Protein sequence

>Msa0270200

MASRFWTQGNSDSDDDEPTDIDDEPNDTEPVDDEPNNNTANRYLQTKPVVDDSDDDDDGQKRVVKSAKDKRFDEMASTVDQIKNAIKINDWVSLQESFDKINKQLEKVMRVIESQKIPNLYIKALVMLEDFLAQASANKDAKKKMSPSNAKAFNSMKQKLKKNNKQYEDLIIKCRESPESEGEKDDEDEDSDEYETDDEIIEPDQLRKPEPVSDSETSELGNDRPPGDDGDAPWDQKLSKKDRLLEKMFMKKPSEITWDTVNKKFKEILEARGRKGTGRFEQVEQLTFLTKVAKTPAQKLQILFSVVSAQFDVNPGLSGHMPINVWKKCVQNMLVILDILVQHPNIKVDDSVELDENETKKGDDYDGPIHVWGNLVAFLEKIDAEFFKSLQCIDPHTREYVERLRDEPQFVVLAQNVQEYLESIGDFKASSKVALKRVELIYYKPHEVYEATRKLAEMTVEGDNGEMSEELKGFEDTRISAPFVVTPELVARKPTFPENSRTLMDVLVSLIYKYGDERTKARAMLCDIYHHALLDEFAVARDLLLMSHLQENVHHMDISTQILFNRAMSQLGLCAFRVGLVSEAHGCLSELYSGGRVKELLAQGVSQSRYHEKTPEQERLERRRQMPYHMHINLELLESVHLTSAMLLEVPNMAANVHDAKRKIISKNFRRLLEVSEKQTFTGPPETVRDHVMAATRVLINGDFQKAFDIIASLEVWKFVKNRDTVLEMLKDKIKEEALRTYLFTFSSSYDSFSLDQLTNFFDLSLPRVHSIVSRMMINEELHASWDQPTGCIIFRNVELSRVQALAFQLTEKLSIVAESNERATEARLGGGGLDLPPRRRDGQDYAAAAAGGGSGTSSGGRWQDLSYSQTRQGSGRTGYGGGRALSFSQAGGSGGYSRGRGTIGGGYQNSGRTQGGSTLRGTHVDTSTRMVSLRGVRA*