AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1410410

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1410410 MtrunA17_Chr4g0071031 98.678 454 6 0 1 454 1 454 0.0 929
Msa1410410 MtrunA17_Chr2g0329981 76.778 478 84 7 1 454 1 475 0.0 728
Msa1410410 MtrunA17_Chr2g0299661 76.170 470 86 5 1 448 1 466 0.0 722
Msa1410410 MtrunA17_Chr8g0342821 74.895 478 92 7 1 454 1 474 0.0 705
Msa1410410 MtrunA17_Chr1g0166821 75.811 339 76 3 1 333 2 340 0.0 547
Msa1410410 MtrunA17_Chr1g0183631 71.667 360 89 4 1 360 1 347 0.0 546
Msa1410410 MtrunA17_Chr7g0261501 81.481 297 55 0 1 297 1 297 0.0 541
Msa1410410 MtrunA17_Chr1g0187571 73.591 337 83 3 1 331 2 338 0.0 531
Msa1410410 MtrunA17_Chr6g0486611 63.070 417 147 4 1 416 1 411 0.0 525
Msa1410410 MtrunA17_Chr8g0390211 68.421 361 112 2 1 360 1 360 0.0 514
Msa1410410 MtrunA17_Chr3g0140071 56.081 444 170 7 1 439 1 424 3.61e-171 487
Msa1410410 MtrunA17_Chr1g0146151 67.073 328 105 1 1 328 1 325 2.71e-166 474
Msa1410410 MtrunA17_Chr1g0167261 72.000 300 82 1 1 298 2 301 3.76e-166 471
Msa1410410 MtrunA17_Chr3g0140431 39.927 273 153 5 9 273 38 307 1.43e-60 207
Msa1410410 MtrunA17_Chr7g0214531 38.351 279 155 5 9 273 37 312 3.22e-60 207
Msa1410410 MtrunA17_Chr1g0146301 38.462 273 157 5 9 273 124 393 7.95e-59 204
Msa1410410 MtrunA17_Chr1g0213321 37.770 278 161 5 9 277 119 393 5.98e-58 202
Msa1410410 MtrunA17_Chr7g0253211 38.754 289 159 6 4 277 317 602 8.57e-58 204
Msa1410410 MtrunA17_Chr8g0340491 36.879 282 156 7 9 273 128 404 1.71e-52 187
Msa1410410 MtrunA17_Chr5g0405421 27.826 230 149 7 2 223 92 312 9.25e-14 73.6
Msa1410410 MtrunA17_Chr8g0374701 27.391 230 139 8 6 219 122 339 2.13e-11 65.9
Msa1410410 MtrunA17_Chr3g0107011 27.500 240 119 11 1 214 5 215 2.43e-11 65.5
Msa1410410 MtrunA17_Chr7g0267751 28.829 222 124 10 9 215 135 337 2.52e-11 65.9
Msa1410410 MtrunA17_Chr1g0157131 28.395 243 139 10 5 233 70 291 8.73e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1410410 AT4G26100.1 73.729 472 83 7 1 453 1 450 0.0 701
Msa1410410 AT5G57015.1 72.961 466 82 8 1 454 1 434 0.0 685
Msa1410410 AT1G72710.1 71.915 470 103 7 1 446 1 465 0.0 660
Msa1410410 AT2G19470.1 66.520 454 103 4 1 449 1 410 0.0 605
Msa1410410 AT3G23340.1 61.556 450 147 8 1 445 1 429 0.0 546
Msa1410410 AT5G44100.1 82.155 297 53 0 1 297 1 297 0.0 545
Msa1410410 AT5G44100.2 82.155 297 53 0 1 297 1 297 0.0 545
Msa1410410 AT1G03930.1 81.818 297 54 0 1 297 1 297 0.0 545
Msa1410410 AT4G28540.1 61.276 439 138 7 1 425 5 425 0.0 529
Msa1410410 AT4G14340.1 60.954 461 148 10 1 446 7 450 0.0 528
Msa1410410 AT5G43320.1 61.538 442 129 8 1 411 1 432 0.0 521
Msa1410410 AT1G04440.1 66.402 378 109 3 1 360 1 378 0.0 521
Msa1410410 AT4G14340.2 73.414 331 85 2 1 331 7 334 0.0 520
Msa1410410 AT5G43320.2 71.940 335 92 1 1 335 1 333 0.0 513
Msa1410410 AT5G43320.3 71.940 335 92 1 1 335 1 333 0.0 513
Msa1410410 AT3G23340.2 60.930 430 142 8 21 445 7 415 0.0 513
Msa1410410 AT4G28880.3 73.041 319 85 1 1 319 1 318 0.0 512
Msa1410410 AT4G28880.2 73.041 319 85 1 1 319 1 318 0.0 512
Msa1410410 AT4G28880.1 73.041 319 85 1 1 319 1 318 0.0 512
Msa1410410 AT4G28880.4 73.041 319 85 1 1 319 1 318 0.0 512
Msa1410410 AT4G28860.2 72.414 319 87 1 1 319 1 318 9.22e-180 507
Msa1410410 AT4G28860.1 72.414 319 87 1 1 319 1 318 2.26e-179 508
Msa1410410 AT4G08800.1 70.627 303 57 2 1 303 1 271 2.21e-159 452
Msa1410410 AT2G25760.2 40.070 287 155 5 4 273 100 386 6.66e-64 218
Msa1410410 AT2G25760.1 39.373 287 154 6 4 273 100 383 9.51e-61 210
Msa1410410 AT3G03940.1 39.446 289 157 6 4 277 133 418 1.08e-59 207
Msa1410410 AT5G18190.2 39.100 289 158 6 4 277 123 408 2.10e-59 206
Msa1410410 AT5G18190.1 39.100 289 158 6 4 277 123 408 2.10e-59 206
Msa1410410 AT3G13670.1 36.749 283 162 5 9 277 137 416 4.31e-57 201
Msa1410410 AT2G17890.1 26.667 225 148 8 7 223 106 321 6.33e-13 71.2
Msa1410410 AT3G50530.1 27.234 235 130 8 6 219 145 359 2.80e-12 69.3
Msa1410410 AT3G06030.1 27.602 221 131 9 8 213 67 273 2.78e-11 66.2
Msa1410410 AT5G58380.1 27.660 235 112 10 7 214 10 213 3.14e-11 65.9
Msa1410410 AT4G36070.2 25.792 221 147 7 7 219 69 280 7.89e-11 64.7
Msa1410410 AT1G54960.1 27.615 239 132 12 8 229 67 281 8.32e-11 64.7
Msa1410410 AT1G54960.2 27.615 239 132 12 8 229 67 281 8.32e-11 64.7
Msa1410410 AT4G36070.1 25.792 221 147 7 7 219 69 280 8.67e-11 64.3

Find 155 sgRNAs with CRISPR-Local

Find 707 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCTCATACTTCTGTTTCT+TGG 0.175329 tig0023654:-54617 None:intergenic
TACAACCCTTAATTCAAAAT+TGG 0.188978 tig0023654:-50384 None:intergenic
ATTAACTCATCCACTCAAAA+TGG 0.212689 tig0023654:+58248 Msa1410410:three_prime_UTR
ATCACCTTTGTTTAGGTTCC+TGG 0.223280 tig0023654:+55194 Msa1410410:intron
GGTTGTAGTTGTTGTGATTA+GGG 0.242352 tig0023654:+50400 Msa1410410:five_prime_UTR
GAAAGCGTAAGAATAGATTT+TGG 0.249403 tig0023654:-50129 None:intergenic
TCCATTACTGTCGCTCATTA+AGG 0.251089 tig0023654:+54803 Msa1410410:CDS
CAGGTTTATGCTATTGATTT+TGG 0.265027 tig0023654:+52198 Msa1410410:intron
AGTTGAGCTGTGAGAAAATT+TGG 0.268018 tig0023654:+58196 Msa1410410:three_prime_UTR
ATTTGTCATAAATACAAATA+TGG 0.273674 tig0023654:+49863 None:intergenic
TATGGTTACTCTAAAATTAT+AGG 0.276080 tig0023654:+49881 Msa1410410:five_prime_UTR
ATTCCAAATGTTAGATGGTT+TGG 0.290598 tig0023654:+51774 Msa1410410:CDS
GGGTTGTAGTTGTTGTGATT+AGG 0.307538 tig0023654:+50399 Msa1410410:five_prime_UTR
TTTAATTGGCAGTTCACTTC+TGG 0.308157 tig0023654:+58299 Msa1410410:three_prime_UTR
GAAACTTACAGTATTCAAAA+TGG 0.319132 tig0023654:-55859 None:intergenic
AGATCGGTAGTGGTTCCTTT+GGG 0.333216 tig0023654:+50498 Msa1410410:CDS
CAAGTGTCTGGAAATTATTC+TGG 0.335403 tig0023654:+58480 Msa1410410:three_prime_UTR
CTGTAAAGTTCAGATTTAAT+TGG 0.338684 tig0023654:+58285 Msa1410410:three_prime_UTR
TTTGTTTAGGTTCCTGGTGC+TGG 0.338785 tig0023654:+55200 Msa1410410:intron
CCCATCAACACATTCCTTAC+AGG 0.339922 tig0023654:+52250 Msa1410410:CDS
CTGGAATTCCAAATGTTAGA+TGG 0.344906 tig0023654:+51769 Msa1410410:CDS
GTAACGGAAGAATATGAAAA+AGG 0.351856 tig0023654:-50292 None:intergenic
CGAGTGGTGTTTACTTCTTT+TGG 0.353051 tig0023654:-49956 None:intergenic
TTTCCTGTATGTTACTGTAT+TGG 0.366145 tig0023654:+58348 Msa1410410:three_prime_UTR
GTTTCCACCATGCAAGTGTC+TGG 0.383466 tig0023654:+58468 Msa1410410:three_prime_UTR
ATTCTATGTGCTGCTGCTCC+AGG 0.385424 tig0023654:-57949 None:intergenic
AAGGGCACTTTCATAGTTAG+TGG 0.388491 tig0023654:-58052 None:intergenic
TTATTCTGGTATTAGAAACT+TGG 0.388819 tig0023654:+58494 Msa1410410:three_prime_UTR
AGCAGGTGGCATTGCAGAAC+TGG 0.388903 tig0023654:-55225 None:intergenic
TCAAACCTTCACGGATAAAC+AGG 0.392297 tig0023654:-54873 None:intergenic
TCCTCTAGGCGCAGAATGTC+GGG 0.395147 tig0023654:+55834 Msa1410410:CDS
ACTCCAAACCATCTAACATT+TGG 0.400425 tig0023654:-51777 None:intergenic
CTAACTATGAAAGTGCCCTT+AGG 0.400516 tig0023654:+58055 Msa1410410:CDS
CCCCAGAGAGTAGCACGGTC+TGG 0.400537 tig0023654:+58012 Msa1410410:CDS
CCCAGACCGTGCTACTCTCT+GGG 0.401614 tig0023654:-58013 None:intergenic
CTTACTCCAGGCCTTATGTC+GGG 0.404462 tig0023654:+54753 Msa1410410:intron
AGTCAAACACATAATCAAAC+TGG 0.409250 tig0023654:-55041 None:intergenic
AAGATCGGTAGTGGTTCCTT+TGG 0.414217 tig0023654:+50497 Msa1410410:CDS
GCTAGCGTATCTTGCAGTTC+CGG 0.415896 tig0023654:-54303 None:intergenic
AGATTACTATGGAAGATAAC+TGG 0.419271 tig0023654:-58577 None:intergenic
GTTATCAAGTTCCAATGTCT+TGG 0.426850 tig0023654:+57825 Msa1410410:intron
GGATCCGAACTTGAATTTCC+AGG 0.429190 tig0023654:+58217 Msa1410410:three_prime_UTR
AGTAGTCGTGATGCATTTGT+TGG 0.429883 tig0023654:+57886 Msa1410410:CDS
CGCACTGCTGAGGCTAGCCC+TGG 0.430913 tig0023654:+57931 Msa1410410:CDS
AAACTATTCTTTCTTGCAAC+CGG 0.433855 tig0023654:-50040 None:intergenic
CAGATTATGCTTATCTCAAA+AGG 0.437611 tig0023654:+54839 Msa1410410:CDS
AATCCCATTAGAAAATTATC+CGG 0.440273 tig0023654:-52061 None:intergenic
TCCTTTGGGGAGATCTACTT+AGG 0.441242 tig0023654:+50512 Msa1410410:CDS
TGTTAGATGGTTTGGAGTAG+AGG 0.442717 tig0023654:+51782 Msa1410410:CDS
ATGGAAGTATGATGCAAATT+CGG 0.452550 tig0023654:-54785 None:intergenic
ACCTGTAAGGAATGTGTTGA+TGG 0.455255 tig0023654:-52251 None:intergenic
TCTTATGCTTGCTGATCAAA+TGG 0.455843 tig0023654:+51896 Msa1410410:CDS
GTTAGATGGTTTGGAGTAGA+GGG 0.456466 tig0023654:+51783 Msa1410410:CDS
GTAATAATTACCTCCCTCTC+AGG 0.458309 tig0023654:-54500 None:intergenic
TAACTATGAAAGTGCCCTTA+GGG 0.461605 tig0023654:+58056 Msa1410410:CDS
AGAGATGATTTAGAGTCTCT+TGG 0.461724 tig0023654:+54459 Msa1410410:CDS
TGGTTTCGGTGGATTCCTCT+AGG 0.466343 tig0023654:+55820 Msa1410410:CDS
AGTTTGATTATGTGTTTGAC+TGG 0.466635 tig0023654:+55043 Msa1410410:CDS
ACTAAATCTTTGTACCTGTA+AGG 0.467328 tig0023654:-52264 None:intergenic
ACCTGATGTTTACACTTCAC+AGG 0.468359 tig0023654:+58374 Msa1410410:three_prime_UTR
GCGAGATCTAGGATAGGATA+AGG 0.470135 tig0023654:-50242 None:intergenic
CGCGACCTGTTTATCCGTGA+AGG 0.474225 tig0023654:+54868 Msa1410410:CDS
CTGGAGAATTCTGTACAACT+TGG 0.479580 tig0023654:-51635 None:intergenic
CCCAGAGAGTAGCACGGTCT+GGG 0.480250 tig0023654:+58013 Msa1410410:CDS
ATTAGGAAGGCGTGCGAACC+AGG 0.481817 tig0023654:+52081 Msa1410410:CDS
TTATCAAGTTCCAATGTCTT+GGG 0.487659 tig0023654:+57826 Msa1410410:CDS
AAACTTACAGTATTCAAAAT+GGG 0.489433 tig0023654:-55858 None:intergenic
GAATCCACCGAAACCAAACC+AGG 0.492539 tig0023654:-55813 None:intergenic
TCCTGTGAAGTGTAAACATC+AGG 0.496749 tig0023654:-58375 None:intergenic
TTCCTCTAGGCGCAGAATGT+CGG 0.497991 tig0023654:+55833 Msa1410410:CDS
CAACAAGAGTAAAATTTCAA+TGG 0.500149 tig0023654:-58430 None:intergenic
CAAGTTGTACAGAATTCTCC+AGG 0.500434 tig0023654:+51636 Msa1410410:CDS
TTAACTCATCCACTCAAAAT+GGG 0.501144 tig0023654:+58249 Msa1410410:three_prime_UTR
ACCAGTGCTGATAGACATAC+AGG 0.504504 tig0023654:+55251 Msa1410410:CDS
AAATTGATAGAGCGAGATCT+AGG 0.504513 tig0023654:-50253 None:intergenic
GGTTGGATAACCCCGACATA+AGG 0.505765 tig0023654:-54764 None:intergenic
GCTTGCTACACCTCCAGCAC+GGG 0.506533 tig0023654:+55092 Msa1410410:CDS
AATGTCGTACAAGATTACTA+TGG 0.506752 tig0023654:-58588 None:intergenic
TTTGAATGGAACCTCGTGTT+GGG 0.509162 tig0023654:+50453 Msa1410410:exon
CCTTACTCCAGGCCTTATGT+CGG 0.510981 tig0023654:+54752 Msa1410410:intron
ATGAATACTCACCTTGGCAT+TGG 0.516193 tig0023654:+54326 Msa1410410:CDS
CAAACCTGGAAATTCAAGTT+CGG 0.523331 tig0023654:-58221 None:intergenic
GCAAACCGTCCATGCCCCTA+AGG 0.525024 tig0023654:-58071 None:intergenic
ACACTTACAATTCCCCGTGC+TGG 0.533191 tig0023654:-55105 None:intergenic
ACCTGTATGTCTATCAGCAC+TGG 0.535307 tig0023654:-55252 None:intergenic
CCTTGGCAGGGACTTAAAGC+AGG 0.537413 tig0023654:+54592 Msa1410410:CDS
AGCTTGCTACACCTCCAGCA+CGG 0.539768 tig0023654:+55091 Msa1410410:CDS
AAACCAATACAGTAACATAC+AGG 0.540468 tig0023654:-58351 None:intergenic
GCAGAACTGGTTCCAGCACC+AGG 0.542045 tig0023654:-55212 None:intergenic
TGAAAGTGCCCTTAGGGGCA+TGG 0.545914 tig0023654:+58062 Msa1410410:CDS
ACTTGATTGACCCAAGACAT+TGG 0.547957 tig0023654:-57836 None:intergenic
AATAGTCATTACTTCCTCCC+TGG 0.548168 tig0023654:-51654 None:intergenic
TTTCGCCTTGGTAGGAAGAT+CGG 0.549005 tig0023654:+50482 Msa1410410:CDS
ACTTGCATGGTGGAAACTAA+AGG 0.549765 tig0023654:-58462 None:intergenic
TTGGTGTAGTGTAGCTGGGT+GGG 0.555222 tig0023654:-49937 None:intergenic
GTTGGGAATAAGTTTCGCCT+TGG 0.555446 tig0023654:+50470 Msa1410410:CDS
CTGTCTCTTACAGGAGCAGA+AGG 0.562373 tig0023654:+55783 Msa1410410:intron
ACCTTAATGAGCGACAGTAA+TGG 0.563244 tig0023654:-54804 None:intergenic
TTAAATAGATCTTCAAGACT+AGG 0.564483 tig0023654:-51840 None:intergenic
TTCTATGTGCTGCTGCTCCA+GGG 0.567837 tig0023654:-57948 None:intergenic
CTTGGTAGGAAGATCGGTAG+TGG 0.568381 tig0023654:+50488 Msa1410410:CDS
AAGTATGATGCAAATTCGGT+TGG 0.569583 tig0023654:-54781 None:intergenic
GGAATAAGTTTCGCCTTGGT+AGG 0.570201 tig0023654:+50474 Msa1410410:CDS
CTATCAGCACTGGTAACAGC+AGG 0.574738 tig0023654:-55242 None:intergenic
AGTGCCCTTAGGGGCATGGA+CGG 0.576647 tig0023654:+58066 Msa1410410:CDS
GGTCAAAGAAGTTCACCAAT+CGG 0.577532 tig0023654:+57979 Msa1410410:CDS
TTACTCCAGGCCTTATGTCG+GGG 0.581815 tig0023654:+54754 Msa1410410:intron
GTCAATCAAGTGGATCATCT+AGG 0.582343 tig0023654:+57848 Msa1410410:CDS
ATTGGCAGTTCACTTCTGGC+CGG 0.586488 tig0023654:+58303 Msa1410410:three_prime_UTR
CAAACCGTCCATGCCCCTAA+GGG 0.586507 tig0023654:-58070 None:intergenic
TCTACATCGAGATATCAAAC+CGG 0.587386 tig0023654:+52042 Msa1410410:CDS
AATGTCTTGGGTCAATCAAG+TGG 0.599106 tig0023654:+57838 Msa1410410:CDS
TATTCTTTCTTGCAACCGGT+CGG 0.602643 tig0023654:-50036 None:intergenic
AGCTTGATAGCAACCACACA+AGG 0.602927 tig0023654:-58526 None:intergenic
AAACTACAATCTTCATGACT+AGG 0.603125 tig0023654:-49914 None:intergenic
TGATGTACTTCCTGAGAGGG+AGG 0.604380 tig0023654:+54490 Msa1410410:CDS
GATAGAGCGAGATCTAGGAT+AGG 0.604596 tig0023654:-50248 None:intergenic
TTGGACTCGTACAGCAGCTG+AGG 0.611846 tig0023654:-51616 None:intergenic
CTTACAATTCCCCGTGCTGG+AGG 0.614854 tig0023654:-55102 None:intergenic
ATTTGAATGGAACCTCGTGT+TGG 0.616512 tig0023654:+50452 Msa1410410:exon
ATGAGTTAATAATACAAACC+TGG 0.618802 tig0023654:-58235 None:intergenic
TTTGGTGTAGTGTAGCTGGG+TGG 0.620356 tig0023654:-49938 None:intergenic
ATAATTTCCAGACACTTGCA+TGG 0.621668 tig0023654:-58475 None:intergenic
TAATATTCAAACTAACGAAG+AGG 0.623322 tig0023654:+50628 Msa1410410:CDS
TGTTCGTACACGCACTGCTG+AGG 0.626085 tig0023654:+57921 Msa1410410:CDS
GATCGGTAGTGGTTCCTTTG+GGG 0.627195 tig0023654:+50499 Msa1410410:CDS
AGAGTTTGGAAGTCCGACAA+AGG 0.632047 tig0023654:+49997 Msa1410410:five_prime_UTR
TGGGGATCAGAAGATCCGAT+TGG 0.639979 tig0023654:-57994 None:intergenic
CCTGTAAGGAATGTGTTGAT+GGG 0.643929 tig0023654:-52250 None:intergenic
CACTACCGATCTTCCTACCA+AGG 0.644344 tig0023654:-50487 None:intergenic
TCCCGACATTCTGCGCCTAG+AGG 0.644999 tig0023654:-55835 None:intergenic
AACTATGAAAGTGCCCTTAG+GGG 0.645280 tig0023654:+58057 Msa1410410:CDS
CCTGCTTTAAGTCCCTGCCA+AGG 0.645862 tig0023654:-54592 None:intergenic
CTTCACGGATAAACAGGTCG+CGG 0.654448 tig0023654:-54867 None:intergenic
ATTTCCAGACACTTGCATGG+TGG 0.654959 tig0023654:-58472 None:intergenic
ACCTAAGTAGATCTCCCCAA+AGG 0.656641 tig0023654:-50513 None:intergenic
TGATTGCTGATACTTCAAGA+TGG 0.656935 tig0023654:-55067 None:intergenic
CGAAACTTATTCCCAACACG+AGG 0.659639 tig0023654:-50464 None:intergenic
ACTAACACATACCAATGCCA+AGG 0.659734 tig0023654:-54337 None:intergenic
TCAGCACTGGTAACAGCAGG+TGG 0.661755 tig0023654:-55239 None:intergenic
GCTAGCATGAATACTCACCT+TGG 0.662753 tig0023654:+54320 Msa1410410:CDS
TTATTAAAAGAAGAGTGTAA+CGG 0.673157 tig0023654:-50308 None:intergenic
TCGAATGAATGAACTCAACA+CGG 0.674813 tig0023654:-52012 None:intergenic
TACACTTCACAGGACCACAA+AGG 0.676644 tig0023654:+58384 Msa1410410:three_prime_UTR
CTTGCTACACCTCCAGCACG+GGG 0.676948 tig0023654:+55093 Msa1410410:CDS
CTGATCCCCAGAGAGTAGCA+CGG 0.679049 tig0023654:+58007 Msa1410410:CDS
ATCCACCGAAACCAAACCAG+GGG 0.683167 tig0023654:-55811 None:intergenic
TGTCTCTTACAGGAGCAGAA+GGG 0.684538 tig0023654:+55784 Msa1410410:intron
CCAGACCGTGCTACTCTCTG+GGG 0.692058 tig0023654:-58012 None:intergenic
CCACTCGTACAGAACACGCG+TGG 0.698598 tig0023654:+49972 Msa1410410:five_prime_UTR
AATCCACCGAAACCAAACCA+GGG 0.699645 tig0023654:-55812 None:intergenic
CCACGCGTGTTCTGTACGAG+TGG 0.711173 tig0023654:-49972 None:intergenic
AAGTTGTACAGAATTCTCCA+GGG 0.726240 tig0023654:+51637 Msa1410410:CDS
TCCACCGAAACCAAACCAGG+GGG 0.759140 tig0023654:-55810 None:intergenic
TTGTACAGAATTCTCCAGGG+AGG 0.760608 tig0023654:+51640 Msa1410410:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAGCAATAATAAAATT+TGG - tig0023654:50428-50447 None:intergenic 10.0%
!! TTAAAAATTACTAAAAGAAA+GGG - tig0023654:51962-51981 None:intergenic 10.0%
!!! GTTATTGTTTTATTATTTAT+AGG - tig0023654:53335-53354 None:intergenic 10.0%
!!! CTAATTTATAATTTTCAATT+AGG + tig0023654:56275-56294 Msa1410410:intron 10.0%
!! TAAATAAAAATATAATGATG+TGG - tig0023654:56381-56400 None:intergenic 10.0%
!! AAATGATAAATAATCATTAA+GGG + tig0023654:56527-56546 Msa1410410:intron 10.0%
!!! TACACATTTTTTTAAAATTT+AGG + tig0023654:57228-57247 Msa1410410:intron 10.0%
!!! ACACATTTTTTTAAAATTTA+GGG + tig0023654:57229-57248 Msa1410410:intron 10.0%
!!! TTTTTATTTTTTTCCTTTGT+CGG - tig0023654:50013-50032 None:intergenic 15.0%
!! TATTGGTAAAAAAAAAATGA+GGG - tig0023654:50189-50208 None:intergenic 15.0%
!! TTATTGGTAAAAAAAAAATG+AGG - tig0023654:50190-50209 None:intergenic 15.0%
!!! ATATTTCCAATTTTGAATTA+AGG + tig0023654:50378-50397 Msa1410410:five_prime_UTR 15.0%
!!! TATTTCCAATTTTGAATTAA+GGG + tig0023654:50379-50398 Msa1410410:five_prime_UTR 15.0%
!!! TTTTTCCTATGTTTATTATT+TGG + tig0023654:50569-50588 Msa1410410:intron 15.0%
!!! ATTATTTTTGTTAATTGTGT+AGG + tig0023654:50602-50621 Msa1410410:intron 15.0%
!!! AGTAAAGATACTTTTTTTTT+GGG - tig0023654:51019-51038 None:intergenic 15.0%
!! CTTAAAAATTACTAAAAGAA+AGG - tig0023654:51963-51982 None:intergenic 15.0%
!! TATTTGTATGCATATTTATT+TGG - tig0023654:52504-52523 None:intergenic 15.0%
!!! AGATTTTTTTGCTTATAATT+CGG - tig0023654:53740-53759 None:intergenic 15.0%
!!! ATTTGCATTTAATTTTACTT+TGG - tig0023654:53843-53862 None:intergenic 15.0%
!!! TGTATTTTTTGCTTATAAAT+TGG + tig0023654:54010-54029 Msa1410410:intron 15.0%
!!! GTATTTTTTGCTTATAAATT+GGG + tig0023654:54011-54030 Msa1410410:intron 15.0%
!!! TATTTGTAAGTTCTTTTTTT+GGG + tig0023654:54226-54245 Msa1410410:intron 15.0%
!!! GAAATTTTTATCATATAGAA+AGG + tig0023654:54894-54913 Msa1410410:intron 15.0%
!! CATACAAATAAAAATATTGA+AGG - tig0023654:55307-55326 None:intergenic 15.0%
!! AAAACTTAAATCTTCATATA+GGG - tig0023654:56170-56189 None:intergenic 15.0%
!! AAAAACTTAAATCTTCATAT+AGG - tig0023654:56171-56190 None:intergenic 15.0%
!!! TATATGAAGATTTAAGTTTT+TGG + tig0023654:56170-56189 Msa1410410:intron 15.0%
!!! ACTATTTGAGAATTTTTAAA+TGG + tig0023654:56217-56236 Msa1410410:intron 15.0%
!! GAAAATTATAAATTAGTTCA+GGG - tig0023654:56271-56290 None:intergenic 15.0%
!! TGAAAATTATAAATTAGTTC+AGG - tig0023654:56272-56291 None:intergenic 15.0%
!! GAAATGATAAATAATCATTA+AGG + tig0023654:56526-56545 Msa1410410:intron 15.0%
!!! TTGTTTTTGCATTAATATTT+AGG + tig0023654:56667-56686 Msa1410410:intron 15.0%
!! AAAATGAGTATTCAATTAAA+AGG + tig0023654:56732-56751 Msa1410410:intron 15.0%
!! AAATGAGTATTCAATTAAAA+GGG + tig0023654:56733-56752 Msa1410410:intron 15.0%
!! TGTATAAAAATTCAAAATTG+AGG - tig0023654:56964-56983 None:intergenic 15.0%
!!! TAAATAAAAATATGATGATG+TGG + tig0023654:57078-57097 Msa1410410:intron 15.0%
!! TTGAAAGTTATAAATAGTTT+AGG + tig0023654:57197-57216 Msa1410410:intron 15.0%
!! TGAAAGTTATAAATAGTTTA+GGG + tig0023654:57198-57217 Msa1410410:intron 15.0%
!!! CTATTTACGAATTTTTTAAT+AGG - tig0023654:57256-57275 None:intergenic 15.0%
!! AAAAAATTCGTAAATAGTTT+AGG + tig0023654:57259-57278 Msa1410410:intron 15.0%
!! AAAAATTCGTAAATAGTTTA+GGG + tig0023654:57260-57279 Msa1410410:intron 15.0%
!!! ATTAAACCTAAGTTTTATTA+TGG + tig0023654:57294-57313 Msa1410410:intron 15.0%
!! GAACATGAAAAATTAATAAT+GGG - tig0023654:58118-58137 None:intergenic 15.0%
!! AGAACATGAAAAATTAATAA+TGG - tig0023654:58119-58138 None:intergenic 15.0%
!!! TATGGTTACTCTAAAATTAT+AGG + tig0023654:49881-49900 Msa1410410:five_prime_UTR 20.0%
!!! TAAGAATAGATTTTGGATAA+TGG - tig0023654:50125-50144 None:intergenic 20.0%
!!! GAGTAATTGTGTTTTATTAT+TGG - tig0023654:50206-50225 None:intergenic 20.0%
!!! TTATTAAAAGAAGAGTGTAA+CGG - tig0023654:50311-50330 None:intergenic 20.0%
!!! TGCTTTTTTTTGAATTTGAA+TGG + tig0023654:50439-50458 Msa1410410:exon 20.0%
!!! AAATAATAATGATGATGAGA+AGG - tig0023654:50550-50569 None:intergenic 20.0%
!! CATAACCAAATAATAAACAT+AGG - tig0023654:50577-50596 None:intergenic 20.0%
!! ATAAACACACACAAAAAAAA+GGG - tig0023654:50724-50743 None:intergenic 20.0%
!!! TTTTTTTTGTGTGTGTTTAT+GGG + tig0023654:50724-50743 Msa1410410:intron 20.0%
!! AGGGTTTATAATATCAAATT+TGG + tig0023654:50791-50810 Msa1410410:intron 20.0%
!! ATGTCATTAAGATTTAAGAA+TGG - tig0023654:50838-50857 None:intergenic 20.0%
!! TTCTTAAATCTTAATGACAT+TGG + tig0023654:50838-50857 Msa1410410:intron 20.0%
!!! TAAAGATACTTTTTTTTTGG+GGG - tig0023654:51017-51036 None:intergenic 20.0%
!!! GTAAAGATACTTTTTTTTTG+GGG - tig0023654:51018-51037 None:intergenic 20.0%
!!! CAGTAAAGATACTTTTTTTT+TGG - tig0023654:51020-51039 None:intergenic 20.0%
!! TTCAATTGAATAAACAAAGT+AGG - tig0023654:51333-51352 None:intergenic 20.0%
!! ATTGTGATGAATAATATCTT+TGG + tig0023654:51403-51422 Msa1410410:intron 20.0%
!! AATTATGACTTAACATTATG+AGG + tig0023654:51463-51482 Msa1410410:intron 20.0%
!!! ATGCACTATTATAGTTTTAT+TGG + tig0023654:52468-52487 Msa1410410:intron 20.0%
!!! TGCACTATTATAGTTTTATT+GGG + tig0023654:52469-52488 Msa1410410:intron 20.0%
!! TATATAGAATTTGTGATATC+TGG + tig0023654:52616-52635 Msa1410410:intron 20.0%
!! ATATAGAATTTGTGATATCT+GGG + tig0023654:52617-52636 Msa1410410:intron 20.0%
!!! TTCTATCATAAACCATATTT+TGG - tig0023654:52752-52771 None:intergenic 20.0%
!! CATTGAAATCTATTCAAATT+TGG - tig0023654:52843-52862 None:intergenic 20.0%
!! CAAATTTGAATAGATTTCAA+TGG + tig0023654:52841-52860 Msa1410410:intron 20.0%
!! AGCAAGTTAAATTCTATTAT+TGG - tig0023654:52879-52898 None:intergenic 20.0%
!! GGTTAATAATGAAAGATAAA+CGG + tig0023654:52917-52936 Msa1410410:intron 20.0%
!! TTGTACTAGTTGTATATAAT+TGG + tig0023654:53355-53374 Msa1410410:intron 20.0%
!! CTATCAGGAATATATTATTT+AGG - tig0023654:53504-53523 None:intergenic 20.0%
!!! AATTCAAGTTTTCTTTTAAC+TGG - tig0023654:53602-53621 None:intergenic 20.0%
!!! AAGTTGATAACAAATATAGA+TGG - tig0023654:53664-53683 None:intergenic 20.0%
!!! GATTTTTTTGCTTATAATTC+GGG - tig0023654:53739-53758 None:intergenic 20.0%
!! CAAAATAATAGCATAAAAGT+TGG - tig0023654:53797-53816 None:intergenic 20.0%
!!! TTTGGAAAAGATGATTTTTT+TGG - tig0023654:53825-53844 None:intergenic 20.0%
!! TTCTTATTGGATAATGATTA+TGG - tig0023654:53897-53916 None:intergenic 20.0%
!! GATGTAAAAACAATTCTTAT+TGG - tig0023654:53910-53929 None:intergenic 20.0%
!!! CTATTTGTAAGTTCTTTTTT+TGG + tig0023654:54225-54244 Msa1410410:intron 20.0%
!!! ATTTGTAAGTTCTTTTTTTG+GGG + tig0023654:54227-54246 Msa1410410:intron 20.0%
!! GTTAAATTGAATGTTGTAAT+CGG + tig0023654:54677-54696 Msa1410410:intron 20.0%
!! ATAAAAATTTCAAACCTTCA+CGG - tig0023654:54885-54904 None:intergenic 20.0%
!! TATTAAATTGACACTTTAAC+AGG + tig0023654:55015-55034 Msa1410410:intron 20.0%
!!! ATTTTAGGGTCTTAATTTTA+GGG - tig0023654:55567-55586 None:intergenic 20.0%
!!! AATTTTAGGGTCTTAATTTT+AGG - tig0023654:55568-55587 None:intergenic 20.0%
!! AAAATTAAGACCCTAAAATT+AGG + tig0023654:55568-55587 Msa1410410:intron 20.0%
!! AGTAGATATCATTTAAACTT+GGG - tig0023654:55734-55753 None:intergenic 20.0%
!! AAGTAGATATCATTTAAACT+TGG - tig0023654:55735-55754 None:intergenic 20.0%
!! AAACTTACAGTATTCAAAAT+GGG - tig0023654:55861-55880 None:intergenic 20.0%
!! AAACTTAAATCTTCATATAG+GGG - tig0023654:56169-56188 None:intergenic 20.0%
!! AAAAATTCTCAAATAGTTCA+GGG - tig0023654:56214-56233 None:intergenic 20.0%
!! TAAAAATTCTCAAATAGTTC+AGG - tig0023654:56215-56234 None:intergenic 20.0%
!! AATATAATGATGTGGATATT+AGG - tig0023654:56373-56392 None:intergenic 20.0%
!!! ATTTTGGTTTTTATTGACTA+TGG - tig0023654:56570-56589 None:intergenic 20.0%
!! TAGTCAATAAAAACCAAAAT+TGG + tig0023654:56570-56589 Msa1410410:intron 20.0%
!! TAAAAACCAAAATTGGAAAA+TGG + tig0023654:56577-56596 Msa1410410:intron 20.0%
!! AATGAGTATTCAATTAAAAG+GGG + tig0023654:56734-56753 Msa1410410:intron 20.0%
!!! ATGACATTTTAATGAAAAAC+TGG + tig0023654:57031-57050 Msa1410410:intron 20.0%
!!! TTTTCTCCATAATAAAACTT+AGG - tig0023654:57303-57322 None:intergenic 20.0%
!! GGAAAATATGTTAAAAACTT+CGG - tig0023654:58333-58352 None:intergenic 20.0%
!!! TACGACATTTTATTTCAATA+TGG + tig0023654:58602-58621 Msa1410410:three_prime_UTR 20.0%
!!! ACGACATTTTATTTCAATAT+GGG + tig0023654:58603-58622 Msa1410410:three_prime_UTR 20.0%
!!! TTTTATTTCAATATGGGAAT+AGG + tig0023654:58609-58628 Msa1410410:three_prime_UTR 20.0%
! AAAAAATAAAAAGAACCGAC+CGG + tig0023654:50021-50040 Msa1410410:five_prime_UTR 25.0%
! GTAAAAAAAAAATGAGGGTT+AGG - tig0023654:50184-50203 None:intergenic 25.0%
! TACAACCCTTAATTCAAAAT+TGG - tig0023654:50387-50406 None:intergenic 25.0%
! TAATATTCAAACTAACGAAG+AGG + tig0023654:50628-50647 Msa1410410:CDS 25.0%
! CATAAACACACACAAAAAAA+AGG - tig0023654:50725-50744 None:intergenic 25.0%
!!! CTTTTTTTTGTGTGTGTTTA+TGG + tig0023654:50723-50742 Msa1410410:intron 25.0%
! AGCTGTTAACTATATTTAAC+AGG + tig0023654:50880-50899 Msa1410410:intron 25.0%
!!! AAACCATGCTTTGAAATAAT+AGG + tig0023654:51126-51145 Msa1410410:intron 25.0%
! TGATGAATAATATCTTTGGT+TGG + tig0023654:51407-51426 Msa1410410:intron 25.0%
! GATGAATAATATCTTTGGTT+GGG + tig0023654:51408-51427 Msa1410410:intron 25.0%
! ATGAATAATATCTTTGGTTG+GGG + tig0023654:51409-51428 Msa1410410:intron 25.0%
!!! ATTGATATTTTTAAGTGCAC+TGG + tig0023654:51527-51546 Msa1410410:intron 25.0%
!!! AGATTACAATGTTTTAGTGA+TGG + tig0023654:51806-51825 Msa1410410:CDS 25.0%
! TTAAATAGATCTTCAAGACT+AGG - tig0023654:51843-51862 None:intergenic 25.0%
! AAATTACTAAAAGAAAGGGT+GGG - tig0023654:51958-51977 None:intergenic 25.0%
! AAAATTACTAAAAGAAAGGG+TGG - tig0023654:51959-51978 None:intergenic 25.0%
! TGATCTGGCAAAAATAAATA+GGG - tig0023654:51991-52010 None:intergenic 25.0%
! TTGATCTGGCAAAAATAAAT+AGG - tig0023654:51992-52011 None:intergenic 25.0%
!! AAACCGGATAATTTTCTAAT+GGG + tig0023654:52058-52077 Msa1410410:CDS 25.0%
! AATCCCATTAGAAAATTATC+CGG - tig0023654:52064-52083 None:intergenic 25.0%
!! GATAATTTTCTAATGGGATT+AGG + tig0023654:52064-52083 Msa1410410:CDS 25.0%
! ATTAAATGAGATGCTTATGT+TGG + tig0023654:52295-52314 Msa1410410:intron 25.0%
!!! TAAAAGTATCATAGCCTATT+AGG + tig0023654:52349-52368 Msa1410410:intron 25.0%
!! TACGTTTTTATGTTTCTTTC+TGG + tig0023654:52529-52548 Msa1410410:intron 25.0%
!! AGAAACAAGTTGAAACTATT+AGG + tig0023654:52700-52719 Msa1410410:intron 25.0%
! TGAAACTATTAGGAAAGATT+TGG + tig0023654:52710-52729 Msa1410410:intron 25.0%
! TGGTTTATGATAGAACATTA+TGG + tig0023654:52757-52776 Msa1410410:intron 25.0%
! AATAACGAAAGAAAAACTGA+AGG + tig0023654:53006-53025 Msa1410410:intron 25.0%
! ATAACAAATATAGATGGTGT+CGG - tig0023654:53658-53677 None:intergenic 25.0%
! TGTCTTACAAATTCAAACAA+TGG - tig0023654:53704-53723 None:intergenic 25.0%
!!! GTTATAGTTTTTTGTGTTCT+TGG - tig0023654:53950-53969 None:intergenic 25.0%
!! TTTTTGCTTATAAATTGGGA+CGG + tig0023654:54015-54034 Msa1410410:intron 25.0%
! AATCTAGAAACAAGAAACTA+AGG - tig0023654:54122-54141 None:intergenic 25.0%
!! CTGAAATATTGATGATATTG+CGG - tig0023654:54172-54191 None:intergenic 25.0%
!! TTTCAGCAATTCATTTTGAA+AGG + tig0023654:54186-54205 Msa1410410:intron 25.0%
!!! TTCAGCAATTCATTTTGAAA+GGG + tig0023654:54187-54206 Msa1410410:intron 25.0%
! AGGGAAAATAAAAATTTGAC+CGG + tig0023654:54284-54303 Msa1410410:intron 25.0%
! TCAAAATACAAGTTCAATGA+AGG - tig0023654:54370-54389 None:intergenic 25.0%
!!! CATTGAACTTGTATTTTGAA+TGG + tig0023654:54371-54390 Msa1410410:intron 25.0%
! TGAGAAAATCAGTGAAAAAA+AGG + tig0023654:54633-54652 Msa1410410:CDS 25.0%
!! ATAAATGATCACCTTTGTTT+AGG + tig0023654:55187-55206 Msa1410410:intron 25.0%
!!! CAGTGAATTTAATTTTGAAG+TGG + tig0023654:55403-55422 Msa1410410:intron 25.0%
!! TCATACACTTCCTAATTTTA+GGG - tig0023654:55581-55600 None:intergenic 25.0%
!! ATCATACACTTCCTAATTTT+AGG - tig0023654:55582-55601 None:intergenic 25.0%
! ACATTAAATATATCCAGCTA+AGG - tig0023654:55762-55781 None:intergenic 25.0%
! GAAACTTACAGTATTCAAAA+TGG - tig0023654:55862-55881 None:intergenic 25.0%
!!! TGTTTGAGAGTATTATAAAG+AGG + tig0023654:56078-56097 Msa1410410:intron 25.0%
! AACTTAAATCTTCATATAGG+GGG - tig0023654:56168-56187 None:intergenic 25.0%
!!! TTTTGGTTTGATTAATCTTC+AGG + tig0023654:56187-56206 Msa1410410:intron 25.0%
! AACTGAAAAAATGTGTAATC+AGG + tig0023654:56244-56263 Msa1410410:intron 25.0%
!! ATTTCTCCATTTTCCAATTT+TGG - tig0023654:56586-56605 None:intergenic 25.0%
! AATCTTTATGTGACATGAAA+AGG + tig0023654:56630-56649 Msa1410410:intron 25.0%
! TGATAATATAGGGGAAAAAT+AGG + tig0023654:56761-56780 Msa1410410:intron 25.0%
! TCTCAATTTGAATTGGAAAA+TGG + tig0023654:56995-57014 Msa1410410:intron 25.0%
! CTCAATTTGAATTGGAAAAT+GGG + tig0023654:56996-57015 Msa1410410:intron 25.0%
!! AATATGATGATGTGGATATT+AGG + tig0023654:57086-57105 Msa1410410:intron 25.0%
! TGAAAGATGATGTGTAAAAT+TGG + tig0023654:57109-57128 Msa1410410:intron 25.0%
! ACTTAGGTTTAATAATCTAC+AGG - tig0023654:57287-57306 None:intergenic 25.0%
! AATACAAAATTCTCCTCATT+TGG + tig0023654:57523-57542 Msa1410410:intron 25.0%
! ATACAAAATTCTCCTCATTT+GGG + tig0023654:57524-57543 Msa1410410:intron 25.0%
! TTTAGAGGGTTAGAAATATA+GGG - tig0023654:57610-57629 None:intergenic 25.0%
! ATGAGTTAATAATACAAACC+TGG - tig0023654:58238-58257 None:intergenic 25.0%
! CTGTAAAGTTCAGATTTAAT+TGG + tig0023654:58285-58304 Msa1410410:three_prime_UTR 25.0%
!!! TTTGATAATTTTGACCTTTG+TGG - tig0023654:58401-58420 None:intergenic 25.0%
! CAACAAGAGTAAAATTTCAA+TGG - tig0023654:58433-58452 None:intergenic 25.0%
!! CATTGAAATTTTACTCTTGT+TGG + tig0023654:58431-58450 Msa1410410:three_prime_UTR 25.0%
! TTATTCTGGTATTAGAAACT+TGG + tig0023654:58494-58513 Msa1410410:three_prime_UTR 25.0%
AAACTACAATCTTCATGACT+AGG - tig0023654:49917-49936 None:intergenic 30.0%
AAACTATTCTTTCTTGCAAC+CGG - tig0023654:50043-50062 None:intergenic 30.0%
!!! TAGATTTTGGATAATGGAGA+TGG - tig0023654:50119-50138 None:intergenic 30.0%
!! GAAAGCGTAAGAATAGATTT+TGG - tig0023654:50132-50151 None:intergenic 30.0%
! GTAACGGAAGAATATGAAAA+AGG - tig0023654:50295-50314 None:intergenic 30.0%
! ACTGCTTTGAATTATATGCA+AGG + tig0023654:50771-50790 Msa1410410:intron 30.0%
! CTGCTTTGAATTATATGCAA+GGG + tig0023654:50772-50791 Msa1410410:intron 30.0%
! TCAAAGCATGGTTTCTAAAA+TGG - tig0023654:51120-51139 None:intergenic 30.0%
TAGCCTATTATTTCAAAGCA+TGG - tig0023654:51132-51151 None:intergenic 30.0%
AATGTTACCCATAAGTTGTA+TGG + tig0023654:51200-51219 Msa1410410:intron 30.0%
ACATGATCCATACAACTTAT+GGG - tig0023654:51210-51229 None:intergenic 30.0%
TCATCACAATCATGAATTGA+GGG - tig0023654:51393-51412 None:intergenic 30.0%
TTCATCACAATCATGAATTG+AGG - tig0023654:51394-51413 None:intergenic 30.0%
TGAATAATATCTTTGGTTGG+GGG + tig0023654:51410-51429 Msa1410410:intron 30.0%
TGACTTAACATTATGAGGAT+TGG + tig0023654:51468-51487 Msa1410410:intron 30.0%
!!! TTATGAGGATTGGTTTTTTG+TGG + tig0023654:51478-51497 Msa1410410:intron 30.0%
!! ATTTTCCTTATGAAAAGCAC+AGG - tig0023654:51581-51600 None:intergenic 30.0%
AAAGGCTAAGACAATGAATA+TGG - tig0023654:51681-51700 None:intergenic 30.0%
! TGAAGAAAGCACAAAAGAAA+AGG - tig0023654:51699-51718 None:intergenic 30.0%
! TTTCTTTTGTGCTTTCTTCA+AGG + tig0023654:51699-51718 Msa1410410:intron 30.0%
ATTCCAAATGTTAGATGGTT+TGG + tig0023654:51774-51793 Msa1410410:CDS 30.0%
AATTACTAAAAGAAAGGGTG+GGG - tig0023654:51957-51976 None:intergenic 30.0%
GATCTGGCAAAAATAAATAG+GGG - tig0023654:51990-52009 None:intergenic 30.0%
! CAAACCGGATAATTTTCTAA+TGG + tig0023654:52057-52076 Msa1410410:CDS 30.0%
! ATTTTCTAATGGGATTAGGA+AGG + tig0023654:52068-52087 Msa1410410:CDS 30.0%
! TTTTAACAAGATTGACTACC+TGG - tig0023654:52102-52121 None:intergenic 30.0%
AGGTAGTCAATCTTGTTAAA+AGG + tig0023654:52101-52120 Msa1410410:intron 30.0%
!!! CAGGTTTATGCTATTGATTT+TGG + tig0023654:52198-52217 Msa1410410:intron 30.0%
!!! TTATGCTATTGATTTTGGTC+TGG + tig0023654:52203-52222 Msa1410410:CDS 30.0%
ACTAAATCTTTGTACCTGTA+AGG - tig0023654:52267-52286 None:intergenic 30.0%
TACAGGTACAAAGATTTAGT+TGG + tig0023654:52267-52286 Msa1410410:intron 30.0%
! GATACTTTTACTATGCTATC+AGG - tig0023654:52339-52358 None:intergenic 30.0%
AGATTTGGAGATTAATGAGT+TGG + tig0023654:52725-52744 Msa1410410:intron 30.0%
! TAATGAGTTGGACCAAAATA+TGG + tig0023654:52737-52756 Msa1410410:intron 30.0%
ATTATTAACCAAACACTGCA+AGG - tig0023654:52907-52926 None:intergenic 30.0%
!! ATTTAGAGTGTACTGTTTTG+AGG - tig0023654:53096-53115 None:intergenic 30.0%
TATTATTTATAGGTCCGCTT+TGG - tig0023654:53325-53344 None:intergenic 30.0%
TTACTCACAATTTACGAGTT+AGG - tig0023654:53413-53432 None:intergenic 30.0%
TAACTCGTAAATTGTGAGTA+AGG + tig0023654:53412-53431 Msa1410410:intron 30.0%
!! ATTCCACAGAGTATTCTTTT+GGG - tig0023654:53465-53484 None:intergenic 30.0%
!! AATTCCACAGAGTATTCTTT+TGG - tig0023654:53466-53485 None:intergenic 30.0%
TGCATTGAATTTCTACTATC+AGG - tig0023654:53519-53538 None:intergenic 30.0%
GATAGTAGAAATTCAATGCA+TGG + tig0023654:53519-53538 Msa1410410:intron 30.0%
!! CAAGTTTTCTTTTAACTGGA+AGG - tig0023654:53598-53617 None:intergenic 30.0%
TAACAAATATAGATGGTGTC+GGG - tig0023654:53657-53676 None:intergenic 30.0%
! ATCAACTTCTCATTTTACAC+CGG + tig0023654:53676-53695 Msa1410410:intron 30.0%
ACAAATTCAAACAATGGTAC+CGG - tig0023654:53698-53717 None:intergenic 30.0%
! TTTTTGCTTATAATTCGGGA+CGG - tig0023654:53735-53754 None:intergenic 30.0%
TAGTTTATTAAGCTGATGGT+TGG + tig0023654:54044-54063 Msa1410410:intron 30.0%
AGTTTATTAAGCTGATGGTT+GGG + tig0023654:54045-54064 Msa1410410:intron 30.0%
AAACAAGAAACTAAGGTGAA+AGG - tig0023654:54115-54134 None:intergenic 30.0%
!! TCTTGTTTCTAGATTCTACT+AGG + tig0023654:54127-54146 Msa1410410:intron 30.0%
!! CTTGTTTCTAGATTCTACTA+GGG + tig0023654:54128-54147 Msa1410410:intron 30.0%
ACTTACAAATAGTAACAGCA+AGG - tig0023654:54217-54236 None:intergenic 30.0%
! TTCTAATTCTCTGGTGATTT+TGG + tig0023654:54418-54437 Msa1410410:intron 30.0%
! TTTCTCATACTTCTGTTTCT+TGG - tig0023654:54620-54639 None:intergenic 30.0%
! ATGGAAGTATGATGCAAATT+CGG - tig0023654:54788-54807 None:intergenic 30.0%
!!! CTTTTGAGATAAGCATAATC+TGG - tig0023654:54841-54860 None:intergenic 30.0%
CAGATTATGCTTATCTCAAA+AGG + tig0023654:54839-54858 Msa1410410:CDS 30.0%
ATTAATAAGCGTGAGAAATG+AGG - tig0023654:54930-54949 None:intergenic 30.0%
AGTCAAACACATAATCAAAC+TGG - tig0023654:55044-55063 None:intergenic 30.0%
AGTTTGATTATGTGTTTGAC+TGG + tig0023654:55043-55062 Msa1410410:CDS 30.0%
!!! AATTTTGAAGTGGAACCTAA+AGG + tig0023654:55413-55432 Msa1410410:intron 30.0%
!!! ATTTTGAAGTGGAACCTAAA+GGG + tig0023654:55414-55433 Msa1410410:intron 30.0%
!!! TGGTTTTGGTAGAATGAAAA+AGG - tig0023654:55614-55633 None:intergenic 30.0%
ATAGAAAGTTATAAAGCCAG+TGG - tig0023654:55634-55653 None:intergenic 30.0%
ATTGCAAAACCTACTTCAAT+GGG - tig0023654:55688-55707 None:intergenic 30.0%
TTTAATGTTCTGTCTCTTAC+AGG + tig0023654:55774-55793 Msa1410410:intron 30.0%
CAAATAAAGCCAAAAAGGTT+CGG - tig0023654:55937-55956 None:intergenic 30.0%
!!! GAACCTTTTTGGCTTTATTT+GGG + tig0023654:55936-55955 Msa1410410:intron 30.0%
!!! AGGGATTTCTCATCTTTTTT+GGG + tig0023654:56001-56020 Msa1410410:intron 30.0%
TTGGGAGAAAATTGTTAAAG+AGG + tig0023654:56019-56038 Msa1410410:intron 30.0%
GAGAAAATTGTTAAAGAGGA+GGG + tig0023654:56023-56042 Msa1410410:intron 30.0%
TTACTCAATAATTTGATCCG+GGG - tig0023654:56144-56163 None:intergenic 30.0%
GTTACTCAATAATTTGATCC+GGG - tig0023654:56145-56164 None:intergenic 30.0%
GGTTACTCAATAATTTGATC+CGG - tig0023654:56146-56165 None:intergenic 30.0%
ACTTAAATCTTCATATAGGG+GGG - tig0023654:56167-56186 None:intergenic 30.0%
AGATGATGTGTAAAATTGGT+TGG - tig0023654:57113-57132 None:intergenic 30.0%
TGGAAGATGATGTGTAAAAT+TGG - tig0023654:56350-56369 None:intergenic 30.0%
ATAATGATGTGGATATTAGG+TGG - tig0023654:56370-56389 None:intergenic 30.0%
AGCATGATAAAGTGTAACAA+TGG + tig0023654:56501-56520 Msa1410410:intron 30.0%
!! AAGCATGTTTTTGAACAATG+AGG + tig0023654:56699-56718 Msa1410410:intron 30.0%
!! AGCATGTTTTTGAACAATGA+GGG + tig0023654:56700-56719 Msa1410410:intron 30.0%
AGTATTCAATTAAAAGGGGT+AGG + tig0023654:56738-56757 Msa1410410:intron 30.0%
! GGAAAAATAGGATCTTTTTG+TGG + tig0023654:56773-56792 Msa1410410:intron 30.0%
TATCTCTCAATTACTTGTGA+TGG + tig0023654:56894-56913 Msa1410410:intron 30.0%
TTTGAATTGGAAAATGGGAA+TGG + tig0023654:57001-57020 Msa1410410:intron 30.0%
TTGAATTGGAAAATGGGAAT+GGG + tig0023654:57002-57021 Msa1410410:intron 30.0%
!! GTTAAACTTTTGATAGTCTC+CGG - tig0023654:57169-57188 None:intergenic 30.0%
GGAGACTATCAAAAGTTTAA+CGG + tig0023654:57168-57187 Msa1410410:intron 30.0%
AAGAAATAGATGACATTGTG+AGG + tig0023654:57470-57489 Msa1410410:intron 30.0%
AGAAATAGATGACATTGTGA+GGG + tig0023654:57471-57490 Msa1410410:intron 30.0%
TACAAAATTCTCCTCATTTG+GGG + tig0023654:57525-57544 Msa1410410:intron 30.0%
GAACTCAAAAATTGTATTGG+AGG + tig0023654:57548-57567 Msa1410410:intron 30.0%
TCAAAAATTGTATTGGAGGA+GGG + tig0023654:57552-57571 Msa1410410:intron 30.0%
GTTAGAAATATAGGGGAAAA+TGG - tig0023654:57602-57621 None:intergenic 30.0%
TTAGAGGGTTAGAAATATAG+GGG - tig0023654:57609-57628 None:intergenic 30.0%
! CTTTAGAGGGTTAGAAATAT+AGG - tig0023654:57611-57630 None:intergenic 30.0%
! TAAGACTTTGTTTGAGAGTT+TGG - tig0023654:57653-57672 None:intergenic 30.0%
GGCAATTATTGCATTTACAA+AGG - tig0023654:57788-57807 None:intergenic 30.0%
TTATCAAGTTCCAATGTCTT+GGG + tig0023654:57826-57845 Msa1410410:CDS 30.0%
!! ATAAGCAACTTTTGCTTTTG+CGG - tig0023654:58169-58188 None:intergenic 30.0%
ATTAACTCATCCACTCAAAA+TGG + tig0023654:58248-58267 Msa1410410:three_prime_UTR 30.0%
TTAACTCATCCACTCAAAAT+GGG + tig0023654:58249-58268 Msa1410410:three_prime_UTR 30.0%
TTTCCTGTATGTTACTGTAT+TGG + tig0023654:58348-58367 Msa1410410:three_prime_UTR 30.0%
AAACCAATACAGTAACATAC+AGG - tig0023654:58354-58373 None:intergenic 30.0%
AGATTACTATGGAAGATAAC+TGG - tig0023654:58580-58599 None:intergenic 30.0%
AATGTCGTACAAGATTACTA+TGG - tig0023654:58591-58610 None:intergenic 30.0%
AAATTGATAGAGCGAGATCT+AGG - tig0023654:50256-50275 None:intergenic 35.0%
GGTTGTAGTTGTTGTGATTA+GGG + tig0023654:50400-50419 Msa1410410:five_prime_UTR 35.0%
! AGCAATTTCAGCATTTTTGC+CGG - tig0023654:50927-50946 None:intergenic 35.0%
GCAAAAATGCTGAAATTGCT+AGG + tig0023654:50927-50946 Msa1410410:intron 35.0%
AAATGCTGAAATTGCTAGGT+CGG + tig0023654:50931-50950 Msa1410410:intron 35.0%
CAATAAAAACTCCACACAAG+TGG - tig0023654:50971-50990 None:intergenic 35.0%
! CACTTGTGTGGAGTTTTTAT+TGG + tig0023654:50969-50988 Msa1410410:intron 35.0%
!!! ACTTTTTTTTTGGGGGTAGA+TGG - tig0023654:51010-51029 None:intergenic 35.0%
!!! TGCTCAAGTGCTTTTTTAAG+AGG + tig0023654:51072-51091 Msa1410410:intron 35.0%
ATAATAGGCTAGTGTGTTAG+AGG + tig0023654:51141-51160 Msa1410410:intron 35.0%
TAATAGGCTAGTGTGTTAGA+GGG + tig0023654:51142-51161 Msa1410410:intron 35.0%
ATGCACTTATAACTGTGCAA+AGG + tig0023654:51173-51192 Msa1410410:intron 35.0%
CACATGATCCATACAACTTA+TGG - tig0023654:51211-51230 None:intergenic 35.0%
TTTGCTCAAAAGATTAGCGT+CGG + tig0023654:51293-51312 Msa1410410:intron 35.0%
ATCACAATCATGAATTGAGG+GGG - tig0023654:51391-51410 None:intergenic 35.0%
CATCACAATCATGAATTGAG+GGG - tig0023654:51392-51411 None:intergenic 35.0%
TTAATGGGAATTGGGTGAAA+TGG + tig0023654:51435-51454 Msa1410410:intron 35.0%
! TTCTTCCTGTGCTTTTCATA+AGG + tig0023654:51573-51592 Msa1410410:intron 35.0%
AAGTTGTACAGAATTCTCCA+GGG + tig0023654:51637-51656 Msa1410410:CDS 35.0%
GAACTGACGATAAATCCTTA+TGG - tig0023654:51726-51745 None:intergenic 35.0%
!! TCAAGTTTGATTTTGACAGC+TGG + tig0023654:51750-51769 Msa1410410:intron 35.0%
CTGGAATTCCAAATGTTAGA+TGG + tig0023654:51769-51788 Msa1410410:CDS 35.0%
ACTCCAAACCATCTAACATT+TGG - tig0023654:51780-51799 None:intergenic 35.0%
! TCTTATGCTTGCTGATCAAA+TGG + tig0023654:51896-51915 Msa1410410:CDS 35.0%
! ATAGTTTGCAAAGTCAATCC+GGG - tig0023654:51926-51945 None:intergenic 35.0%
! GATAGTTTGCAAAGTCAATC+CGG - tig0023654:51927-51946 None:intergenic 35.0%
TCGAATGAATGAACTCAACA+CGG - tig0023654:52015-52034 None:intergenic 35.0%
TCTACATCGAGATATCAAAC+CGG + tig0023654:52042-52061 Msa1410410:CDS 35.0%
GGATAAACGTGAATCCTAAT+AGG - tig0023654:52366-52385 None:intergenic 35.0%
TAGGATTCACGTTTATCCAA+TGG + tig0023654:52368-52387 Msa1410410:intron 35.0%
TTGTAACTTACAACTGCCAT+TGG - tig0023654:52387-52406 None:intergenic 35.0%
TATCACACTGTTGTCATATG+TGG + tig0023654:52424-52443 Msa1410410:intron 35.0%
ATCACACTGTTGTCATATGT+GGG + tig0023654:52425-52444 Msa1410410:intron 35.0%
ATGTGGGAAAAATAACGACT+AGG + tig0023654:52441-52460 Msa1410410:intron 35.0%
TGTGGGAAAAATAACGACTA+GGG + tig0023654:52442-52461 Msa1410410:intron 35.0%
CTTTGTCATACTAGAGTGAA+TGG - tig0023654:52555-52574 None:intergenic 35.0%
ATCATTGATAGACTGGCATT+CGG - tig0023654:52580-52599 None:intergenic 35.0%
TCTATATAGAATACAGCGTG+TGG - tig0023654:52604-52623 None:intergenic 35.0%
GCTATATTGGGAATTTGACA+AGG + tig0023654:52645-52664 Msa1410410:intron 35.0%
AATTACTGTGCACAGTCATA+CGG - tig0023654:52954-52973 None:intergenic 35.0%
GAAAGAAAAACTGAAGGATG+TGG + tig0023654:53012-53031 Msa1410410:intron 35.0%
! ATGATTTCATATTTTCCCCG+AGG + tig0023654:53134-53153 Msa1410410:intron 35.0%
! TGATTTCATATTTTCCCCGA+GGG + tig0023654:53135-53154 Msa1410410:intron 35.0%
TATTGACAACAGAGATGTCA+GGG - tig0023654:53176-53195 None:intergenic 35.0%
AATTTACGAGTTAGGAATCC+TGG - tig0023654:53405-53424 None:intergenic 35.0%
! TAACTGGAAGGATTTTCTAG+CGG - tig0023654:53586-53605 None:intergenic 35.0%
GGAGTAGTTTATTAAGCTGA+TGG + tig0023654:54040-54059 Msa1410410:intron 35.0%
GTTTATTAAGCTGATGGTTG+GGG + tig0023654:54046-54065 Msa1410410:intron 35.0%
TATTCAATCATCAACACTGC+AGG + tig0023654:54264-54283 Msa1410410:intron 35.0%
ATTCAATCATCAACACTGCA+GGG + tig0023654:54265-54284 Msa1410410:intron 35.0%
GAATACTGCTTCTAATTCTC+TGG + tig0023654:54409-54428 Msa1410410:intron 35.0%
! AGAGATGATTTAGAGTCTCT+TGG + tig0023654:54459-54478 Msa1410410:CDS 35.0%
! TTTTGATGTACTTCCTGAGA+GGG + tig0023654:54487-54506 Msa1410410:CDS 35.0%
ATTACTGTCGACCTTTACTT+TGG + tig0023654:54518-54537 Msa1410410:intron 35.0%
TCAGATAAAGTACATAGTGC+TGG - tig0023654:54550-54569 None:intergenic 35.0%
! GTTCTTTTTGTAGTCTTCCT+TGG + tig0023654:54575-54594 Msa1410410:intron 35.0%
AGCAAATTCTTAGTGTAGGT+CGG - tig0023654:54732-54751 None:intergenic 35.0%
AAGGAGCAAATTCTTAGTGT+AGG - tig0023654:54736-54755 None:intergenic 35.0%
AAGTATGATGCAAATTCGGT+TGG - tig0023654:54784-54803 None:intergenic 35.0%
TGATTGCTGATACTTCAAGA+TGG - tig0023654:55070-55089 None:intergenic 35.0%
ATGACATGGTAATCACAACT+GGG - tig0023654:55149-55168 None:intergenic 35.0%
TTGCAGTTAACAAGTTGCTT+GGG + tig0023654:55464-55483 Msa1410410:intron 35.0%
!!! AATTTTAGGGCAAGGAGATA+GGG - tig0023654:55554-55573 None:intergenic 35.0%
!!! TAATTTTAGGGCAAGGAGAT+AGG - tig0023654:55555-55574 None:intergenic 35.0%
TTTCATTCTACCAAAACCAC+TGG + tig0023654:55615-55634 Msa1410410:intron 35.0%
! AGTTATAAAGCCAGTGGTTT+TGG - tig0023654:55628-55647 None:intergenic 35.0%
TTTCAACTACCCATTGAAGT+AGG + tig0023654:55676-55695 Msa1410410:intron 35.0%
CATTGCAAAACCTACTTCAA+TGG - tig0023654:55689-55708 None:intergenic 35.0%
TATCTACTTAACACCTTAGC+TGG + tig0023654:55746-55765 Msa1410410:intron 35.0%
TGCAATACCAGCGTAATATA+TGG - tig0023654:55905-55924 None:intergenic 35.0%
!!! CGAACCTTTTTGGCTTTATT+TGG + tig0023654:55935-55954 Msa1410410:intron 35.0%
ACTCCCAAATAAAGCCAAAA+AGG - tig0023654:55942-55961 None:intergenic 35.0%
!! TTTGGCTTTATTTGGGAGTT+AGG + tig0023654:55943-55962 Msa1410410:intron 35.0%
!!! GAGGGATTTCTCATCTTTTT+TGG + tig0023654:56000-56019 Msa1410410:intron 35.0%
GGAGAAAATTGTTAAAGAGG+AGG + tig0023654:56022-56041 Msa1410410:intron 35.0%
GTTACACTTTATCATGCTCT+GGG - tig0023654:56499-56518 None:intergenic 35.0%
TGTTACACTTTATCATGCTC+TGG - tig0023654:56500-56519 None:intergenic 35.0%
AAAGGGGTAGGTGATAATAT+AGG + tig0023654:56750-56769 Msa1410410:intron 35.0%
AAGGGGTAGGTGATAATATA+GGG + tig0023654:56751-56770 Msa1410410:intron 35.0%
!! AGAGCAGTGTTTCTGATTTT+TGG + tig0023654:56853-56872 Msa1410410:intron 35.0%
!! GAGCAGTGTTTCTGATTTTT+GGG + tig0023654:56854-56873 Msa1410410:intron 35.0%
!! AGCAGTGTTTCTGATTTTTG+GGG + tig0023654:56855-56874 Msa1410410:intron 35.0%
!!! TTTCTGATTTTTGGGGTTGA+AGG + tig0023654:56862-56881 Msa1410410:intron 35.0%
!! AGTGGTGTTGTTGACTATAA+TGG + tig0023654:56926-56945 Msa1410410:intron 35.0%
CGATCGTTCTCAATTTGAAT+TGG + tig0023654:56988-57007 Msa1410410:intron 35.0%
AAACTTGCAAACAAAGCCTA+AGG - tig0023654:57401-57420 None:intergenic 35.0%
!! TTAGGCTTTGTTTGCAAGTT+TGG + tig0023654:57400-57419 Msa1410410:intron 35.0%
ACAAAATTCTCCTCATTTGG+GGG + tig0023654:57526-57545 Msa1410410:intron 35.0%
GGGGAACTCAAAAATTGTAT+TGG + tig0023654:57545-57564 Msa1410410:intron 35.0%
CTCAAAAATTGTATTGGAGG+AGG + tig0023654:57551-57570 Msa1410410:intron 35.0%
! ACTTTGTTTGAGAGTTTGGA+GGG - tig0023654:57649-57668 None:intergenic 35.0%
AACAAAGATCTGAGTGGAAA+AGG - tig0023654:57697-57716 None:intergenic 35.0%
ATTCACAACAAAGATCTGAG+TGG - tig0023654:57703-57722 None:intergenic 35.0%
TAACTGCATGATCACATATG+AGG - tig0023654:57809-57828 None:intergenic 35.0%
GTTATCAAGTTCCAATGTCT+TGG + tig0023654:57825-57844 Msa1410410:intron 35.0%
!! TAACTATGAAAGTGCCCTTA+GGG + tig0023654:58056-58075 Msa1410410:CDS 35.0%
AGTTGAGCTGTGAGAAAATT+TGG + tig0023654:58196-58215 Msa1410410:three_prime_UTR 35.0%
! CAAACCTGGAAATTCAAGTT+CGG - tig0023654:58224-58243 None:intergenic 35.0%
TTTAATTGGCAGTTCACTTC+TGG + tig0023654:58299-58318 Msa1410410:three_prime_UTR 35.0%
!! TGTTAAAAACTTCGGTGTTC+CGG - tig0023654:58325-58344 None:intergenic 35.0%
ATAATTTCCAGACACTTGCA+TGG - tig0023654:58478-58497 None:intergenic 35.0%
CAAGTGTCTGGAAATTATTC+TGG + tig0023654:58480-58499 Msa1410410:three_prime_UTR 35.0%
! TTGGAATGTTTTACCTTGTG+TGG + tig0023654:58513-58532 Msa1410410:three_prime_UTR 35.0%
!! TCTTTTGGTGTAGTGTAGCT+GGG - tig0023654:49944-49963 None:intergenic 40.0%
!! TTCTTTTGGTGTAGTGTAGC+TGG - tig0023654:49945-49964 None:intergenic 40.0%
! CGAGTGGTGTTTACTTCTTT+TGG - tig0023654:49959-49978 None:intergenic 40.0%
TATTCTTTCTTGCAACCGGT+CGG - tig0023654:50039-50058 None:intergenic 40.0%
GGGTTGTAGTTGTTGTGATT+AGG + tig0023654:50399-50418 Msa1410410:five_prime_UTR 40.0%
ATTTGAATGGAACCTCGTGT+TGG + tig0023654:50452-50471 Msa1410410:exon 40.0%
TTTGAATGGAACCTCGTGTT+GGG + tig0023654:50453-50472 Msa1410410:exon 40.0%
TAAAAACTCCACACAAGTGG+AGG - tig0023654:50968-50987 None:intergenic 40.0%
!!! TTTTTTTTGGGGGTAGATGG+AGG - tig0023654:51007-51026 None:intergenic 40.0%
ATTCTCGCTTCCTATTTCCT+TGG + tig0023654:51045-51064 Msa1410410:intron 40.0%
TTGCTCAAAAGATTAGCGTC+GGG + tig0023654:51294-51313 Msa1410410:intron 40.0%
!! TCTTTGGTTGGGGGTTTTAA+TGG + tig0023654:51419-51438 Msa1410410:intron 40.0%
!! CTTTGGTTGGGGGTTTTAAT+GGG + tig0023654:51420-51439 Msa1410410:intron 40.0%
!! TTGGGGGTTTTAATGGGAAT+TGG + tig0023654:51426-51445 Msa1410410:intron 40.0%
!! TGGGGGTTTTAATGGGAATT+GGG + tig0023654:51427-51446 Msa1410410:intron 40.0%
CTGGAGAATTCTGTACAACT+TGG - tig0023654:51638-51657 None:intergenic 40.0%
CAAGTTGTACAGAATTCTCC+AGG + tig0023654:51636-51655 Msa1410410:CDS 40.0%
AATAGTCATTACTTCCTCCC+TGG - tig0023654:51657-51676 None:intergenic 40.0%
TGCTTTCTTCAAGGACCATA+AGG + tig0023654:51708-51727 Msa1410410:intron 40.0%
! TGTTAGATGGTTTGGAGTAG+AGG + tig0023654:51782-51801 Msa1410410:CDS 40.0%
! GTTAGATGGTTTGGAGTAGA+GGG + tig0023654:51783-51802 Msa1410410:CDS 40.0%
!!! GTTTTAGTGATGGATCTGCT+TGG + tig0023654:51816-51835 Msa1410410:CDS 40.0%
! ATGCTTGCTGATCAAATGGT+AGG + tig0023654:51900-51919 Msa1410410:intron 40.0%
! CCTGTAAGGAATGTGTTGAT+GGG - tig0023654:52253-52272 None:intergenic 40.0%
ACCTGTAAGGAATGTGTTGA+TGG - tig0023654:52254-52273 None:intergenic 40.0%
GTGTGGAATCATTGATAGAC+TGG - tig0023654:52587-52606 None:intergenic 40.0%
ATTGGGAATTTGACAAGGAC+TGG + tig0023654:52650-52669 Msa1410410:intron 40.0%
TTGGGAATTTGACAAGGACT+GGG + tig0023654:52651-52670 Msa1410410:intron 40.0%
! AACAACCAAGCCTTATACGT+GGG - tig0023654:52807-52826 None:intergenic 40.0%
AGAAAAACTGAAGGATGTGG+TGG + tig0023654:53015-53034 Msa1410410:intron 40.0%
GAAAAACTGAAGGATGTGGT+GGG + tig0023654:53016-53035 Msa1410410:intron 40.0%
!!! AGAGTGTACTGTTTTGAGGT+GGG - tig0023654:53092-53111 None:intergenic 40.0%
!!! TAGAGTGTACTGTTTTGAGG+TGG - tig0023654:53093-53112 None:intergenic 40.0%
CTATTGACAACAGAGATGTC+AGG - tig0023654:53177-53196 None:intergenic 40.0%
CTCGTAAATTGTGAGTAAGG+AGG + tig0023654:53415-53434 Msa1410410:intron 40.0%
TTGCCCAAAAGAATACTCTG+TGG + tig0023654:53459-53478 Msa1410410:intron 40.0%
!! AACTGGAAGGATTTTCTAGC+GGG - tig0023654:53585-53604 None:intergenic 40.0%
TTGCTTATAAATTGGGACGG+AGG + tig0023654:54018-54037 Msa1410410:intron 40.0%
TGCTTATAAATTGGGACGGA+GGG + tig0023654:54019-54038 Msa1410410:intron 40.0%
TATAACACTTCCTACCACCA+AGG - tig0023654:54072-54091 None:intergenic 40.0%
TTCTAGATTCTACTAGGGTC+AGG + tig0023654:54133-54152 Msa1410410:intron 40.0%
ATGAATACTCACCTTGGCAT+TGG + tig0023654:54326-54345 Msa1410410:CDS 40.0%
ACTAACACATACCAATGCCA+AGG - tig0023654:54340-54359 None:intergenic 40.0%
!! GTTTTGATGTACTTCCTGAG+AGG + tig0023654:54486-54505 Msa1410410:CDS 40.0%
GTAATAATTACCTCCCTCTC+AGG - tig0023654:54503-54522 None:intergenic 40.0%
! TTTTTGTAGTCTTCCTTGGC+AGG + tig0023654:54579-54598 Msa1410410:intron 40.0%
! TTTTGTAGTCTTCCTTGGCA+GGG + tig0023654:54580-54599 Msa1410410:intron 40.0%
GCAAATTCTTAGTGTAGGTC+GGG - tig0023654:54731-54750 None:intergenic 40.0%
! AAGAATTTGCTCCTTACTCC+AGG + tig0023654:54741-54760 Msa1410410:intron 40.0%
TCCATTACTGTCGCTCATTA+AGG + tig0023654:54803-54822 Msa1410410:CDS 40.0%
ACCTTAATGAGCGACAGTAA+TGG - tig0023654:54807-54826 None:intergenic 40.0%
TCAAACCTTCACGGATAAAC+AGG - tig0023654:54876-54895 None:intergenic 40.0%
TGACATGGTAATCACAACTG+GGG - tig0023654:55148-55167 None:intergenic 40.0%
GATGACATGGTAATCACAAC+TGG - tig0023654:55150-55169 None:intergenic 40.0%
GATTACCATGTCATCTGCAA+TGG + tig0023654:55155-55174 Msa1410410:intron 40.0%
TTCATCCATTGCAGATGACA+TGG - tig0023654:55163-55182 None:intergenic 40.0%
! ATCACCTTTGTTTAGGTTCC+TGG + tig0023654:55194-55213 Msa1410410:intron 40.0%
AGATCTCCCATAAGTGTAAC+AGG + tig0023654:55281-55300 Msa1410410:intron 40.0%
TGAAGGCCTGTTACACTTAT+GGG - tig0023654:55290-55309 None:intergenic 40.0%
TTGAAGGCCTGTTACACTTA+TGG - tig0023654:55291-55310 None:intergenic 40.0%
TTGGTCAAACGTAGTTAGGA+AGG + tig0023654:55438-55457 Msa1410410:intron 40.0%
CTTGCAGTTAACAAGTTGCT+TGG + tig0023654:55463-55482 Msa1410410:intron 40.0%
TGCAGTTAACAAGTTGCTTG+GGG + tig0023654:55465-55484 Msa1410410:intron 40.0%
!!! AGGGTCTTAATTTTAGGGCA+AGG - tig0023654:55562-55581 None:intergenic 40.0%
TCAGTCACCATATATTACGC+TGG + tig0023654:55895-55914 Msa1410410:intron 40.0%
! GATGTTTTGCCGAACCTTTT+TGG + tig0023654:55925-55944 Msa1410410:intron 40.0%
ATTTGGGAGTTAGGAGGAAA+AGG + tig0023654:55952-55971 Msa1410410:intron 40.0%
TTTGGGAGTTAGGAGGAAAA+GGG + tig0023654:55953-55972 Msa1410410:intron 40.0%
TCAATAATTTGATCCGGGGA+GGG - tig0023654:56140-56159 None:intergenic 40.0%
!! CAGTGTTGAGTGTTGACTAA+CGG - tig0023654:56306-56325 None:intergenic 40.0%
! TGCTTTTCTGATTTCAGCCT+CGG + tig0023654:56461-56480 Msa1410410:intron 40.0%
AGGGGTAGGTGATAATATAG+GGG + tig0023654:56752-56771 Msa1410410:intron 40.0%
TCAGTACACAGACACATCAA+TGG - tig0023654:56801-56820 None:intergenic 40.0%
TGACCCACACTATTGTGTTT+GGG + tig0023654:56818-56837 Msa1410410:intron 40.0%
! CTTTGTTTGCAAGTTTGGAG+AGG + tig0023654:57405-57424 Msa1410410:intron 40.0%
TTTGCAAGTTTGGAGAGGAA+GGG + tig0023654:57410-57429 Msa1410410:intron 40.0%
AGGGGTTTGGAAAAAAAGGA+AGG + tig0023654:57438-57457 Msa1410410:intron 40.0%
GAAAAAAAGGAAGGAGCAAG+TGG + tig0023654:57447-57466 Msa1410410:intron 40.0%
TAGATGACATTGTGAGGGAA+AGG + tig0023654:57476-57495 Msa1410410:intron 40.0%
!!! TTTTTGAGTTCCCCCAAATG+AGG - tig0023654:57539-57558 None:intergenic 40.0%
! CTTTGTTTGAGAGTTTGGAG+GGG - tig0023654:57648-57667 None:intergenic 40.0%
! GACTTTGTTTGAGAGTTTGG+AGG - tig0023654:57650-57669 None:intergenic 40.0%
ACTTGATTGACCCAAGACAT+TGG - tig0023654:57839-57858 None:intergenic 40.0%
AATGTCTTGGGTCAATCAAG+TGG + tig0023654:57838-57857 Msa1410410:CDS 40.0%
GTCAATCAAGTGGATCATCT+AGG + tig0023654:57848-57867 Msa1410410:CDS 40.0%
AGTAGTCGTGATGCATTTGT+TGG + tig0023654:57886-57905 Msa1410410:CDS 40.0%
! GCAGCACATAGAATTTTGAG+CGG + tig0023654:57958-57977 Msa1410410:CDS 40.0%
GGTCAAAGAAGTTCACCAAT+CGG + tig0023654:57979-57998 Msa1410410:CDS 40.0%
!! AAGGGCACTTTCATAGTTAG+TGG - tig0023654:58055-58074 None:intergenic 40.0%
!! CTAACTATGAAAGTGCCCTT+AGG + tig0023654:58055-58074 Msa1410410:CDS 40.0%
!! AACTATGAAAGTGCCCTTAG+GGG + tig0023654:58057-58076 Msa1410410:CDS 40.0%
ACCTGATGTTTACACTTCAC+AGG + tig0023654:58374-58393 Msa1410410:three_prime_UTR 40.0%
TCCTGTGAAGTGTAAACATC+AGG - tig0023654:58378-58397 None:intergenic 40.0%
! ACTTGCATGGTGGAAACTAA+AGG - tig0023654:58465-58484 None:intergenic 40.0%
AGAGTTTGGAAGTCCGACAA+AGG + tig0023654:49997-50016 Msa1410410:five_prime_UTR 45.0%
! GCGAGATCTAGGATAGGATA+AGG - tig0023654:50245-50264 None:intergenic 45.0%
! GATAGAGCGAGATCTAGGAT+AGG - tig0023654:50251-50270 None:intergenic 45.0%
CGAAACTTATTCCCAACACG+AGG - tig0023654:50467-50486 None:intergenic 45.0%
GTTGGGAATAAGTTTCGCCT+TGG + tig0023654:50470-50489 Msa1410410:CDS 45.0%
GGAATAAGTTTCGCCTTGGT+AGG + tig0023654:50474-50493 Msa1410410:CDS 45.0%
TTTCGCCTTGGTAGGAAGAT+CGG + tig0023654:50482-50501 Msa1410410:CDS 45.0%
! AAGATCGGTAGTGGTTCCTT+TGG + tig0023654:50497-50516 Msa1410410:CDS 45.0%
! AGATCGGTAGTGGTTCCTTT+GGG + tig0023654:50498-50517 Msa1410410:CDS 45.0%
! TCCTTTGGGGAGATCTACTT+AGG + tig0023654:50512-50531 Msa1410410:CDS 45.0%
ACCTAAGTAGATCTCCCCAA+AGG - tig0023654:50516-50535 None:intergenic 45.0%
!! TCCACAAGTTCTAGCTCAAC+CGG + tig0023654:50905-50924 Msa1410410:intron 45.0%
TCGCTTCCTATTTCCTTGGA+GGG + tig0023654:51049-51068 Msa1410410:intron 45.0%
AATCCATTCCACTCACTCCT+CGG + tig0023654:51351-51370 Msa1410410:intron 45.0%
! GTATTTTTCCGAGGAGTGAG+TGG - tig0023654:51362-51381 None:intergenic 45.0%
CTCACTCCTCGGAAAAATAC+CGG + tig0023654:51362-51381 Msa1410410:intron 45.0%
TTGTACAGAATTCTCCAGGG+AGG + tig0023654:51640-51659 Msa1410410:CDS 45.0%
TGAACTCAACACGGTTGATC+TGG - tig0023654:52006-52025 None:intergenic 45.0%
CCCATCAACACATTCCTTAC+AGG + tig0023654:52250-52269 Msa1410410:CDS 45.0%
GGGAAAAATAACGACTAGGG+AGG + tig0023654:52445-52464 Msa1410410:intron 45.0%
TATCTGGGCTGCTGCTATAT+TGG + tig0023654:52632-52651 Msa1410410:intron 45.0%
ATCTGGGCTGCTGCTATATT+GGG + tig0023654:52633-52652 Msa1410410:intron 45.0%
TGGGAATTTGACAAGGACTG+GGG + tig0023654:52652-52671 Msa1410410:intron 45.0%
ACAAGGACTGGGGTTAAATG+TGG + tig0023654:52662-52681 Msa1410410:intron 45.0%
! ACAACCAAGCCTTATACGTG+GGG - tig0023654:52806-52825 None:intergenic 45.0%
! CAACAACCAAGCCTTATACG+TGG - tig0023654:52808-52827 None:intergenic 45.0%
GCTTAACTCCTTGCAGTGTT+TGG + tig0023654:52896-52915 Msa1410410:intron 45.0%
GATGTCAGGGATAGGAACAT+AGG - tig0023654:53163-53182 None:intergenic 45.0%
ACAACAGAGATGTCAGGGAT+AGG - tig0023654:53171-53190 None:intergenic 45.0%
! TATAGCGGAGCGGAAAAATC+AGG + tig0023654:53213-53232 Msa1410410:intron 45.0%
! AGATGGTGTCGGGAAGAATA+AGG - tig0023654:53647-53666 None:intergenic 45.0%
TGCTTATAATTCGGGACGGA+GGG - tig0023654:53731-53750 None:intergenic 45.0%
TTGCTTATAATTCGGGACGG+AGG - tig0023654:53732-53751 None:intergenic 45.0%
GCTAGCATGAATACTCACCT+TGG + tig0023654:54320-54339 Msa1410410:CDS 45.0%
GCTGGAAGACACCAAAGTAA+AGG - tig0023654:54532-54551 None:intergenic 45.0%
ATTCTTAGTGTAGGTCGGGA+AGG - tig0023654:54727-54746 None:intergenic 45.0%
AGCACCAGGAACCTAAACAA+AGG - tig0023654:55201-55220 None:intergenic 45.0%
! TTTGTTTAGGTTCCTGGTGC+TGG + tig0023654:55200-55219 Msa1410410:intron 45.0%
!! ACCAGTGCTGATAGACATAC+AGG + tig0023654:55251-55270 Msa1410410:CDS 45.0%
ACCTGTATGTCTATCAGCAC+TGG - tig0023654:55255-55274 None:intergenic 45.0%
TACGTTTGACCAAGCCCTTT+AGG - tig0023654:55431-55450 None:intergenic 45.0%
TTAACAAGTTGCTTGGGGTG+AGG + tig0023654:55470-55489 Msa1410410:intron 45.0%
CGAGCTCAAAATCACATGCA+GGG - tig0023654:55505-55524 None:intergenic 45.0%
! CCTGCATGTGATTTTGAGCT+CGG + tig0023654:55503-55522 Msa1410410:intron 45.0%
TGTCTCTTACAGGAGCAGAA+GGG + tig0023654:55784-55803 Msa1410410:intron 45.0%
AATCCACCGAAACCAAACCA+GGG - tig0023654:55815-55834 None:intergenic 45.0%
!! GGCTTTATTTGGGAGTTAGG+AGG + tig0023654:55946-55965 Msa1410410:intron 45.0%
! TTAGGAGGAAAAGGGTGTGT+TGG + tig0023654:55961-55980 Msa1410410:intron 45.0%
! TAGGAGGAAAAGGGTGTGTT+GGG + tig0023654:55962-55981 Msa1410410:intron 45.0%
! GAAAAGGGTGTGTTGGGAAA+TGG + tig0023654:55968-55987 Msa1410410:intron 45.0%
GGTGTGTTGGGAAATGGAAA+GGG + tig0023654:55974-55993 Msa1410410:intron 45.0%
CTCAATAATTTGATCCGGGG+AGG - tig0023654:56141-56160 None:intergenic 45.0%
!! GTTGAGTGTTGACTAACGGA+AGG - tig0023654:56302-56321 None:intergenic 45.0%
TCAACACTCAACACTGACGA+GGG + tig0023654:56310-56329 Msa1410410:intron 45.0%
TGATTTCAGCCTCGGCAATT+TGG + tig0023654:56469-56488 Msa1410410:intron 45.0%
CTGACCCACACTATTGTGTT+TGG + tig0023654:56817-56836 Msa1410410:intron 45.0%
CGTCCCAAACACAATAGTGT+GGG - tig0023654:56824-56843 None:intergenic 45.0%
CCACACTATTGTGTTTGGGA+CGG + tig0023654:56822-56841 Msa1410410:intron 45.0%
! TTGTGATGGAGAAGCTTGAG+TGG + tig0023654:56908-56927 Msa1410410:intron 45.0%
!! CCTTGTCAGCGTTGATTAAC+CGG + tig0023654:57147-57166 Msa1410410:intron 45.0%
GAAAAATAACCCCTCGTGCA+AGG + tig0023654:57318-57337 Msa1410410:intron 45.0%
!! TAAGGCTTTGGAGAAAGAGG+GGG - tig0023654:57383-57402 None:intergenic 45.0%
!! CTAAGGCTTTGGAGAAAGAG+GGG - tig0023654:57384-57403 None:intergenic 45.0%
!! CCTAAGGCTTTGGAGAAAGA+GGG - tig0023654:57385-57404 None:intergenic 45.0%
GCAAACAAAGCCTAAGGCTT+TGG - tig0023654:57395-57414 None:intergenic 45.0%
GTTTGCAAGTTTGGAGAGGA+AGG + tig0023654:57409-57428 Msa1410410:intron 45.0%
ACATTGTGAGGGAAAGGCTT+TGG + tig0023654:57482-57501 Msa1410410:intron 45.0%
CATTGTGAGGGAAAGGCTTT+GGG + tig0023654:57483-57502 Msa1410410:intron 45.0%
ATTGTGAGGGAAAGGCTTTG+GGG + tig0023654:57484-57503 Msa1410410:intron 45.0%
! TGTATTGGAGGAGGGTTTTG+AGG + tig0023654:57560-57579 Msa1410410:intron 45.0%
!! GTATTGGAGGAGGGTTTTGA+GGG + tig0023654:57561-57580 Msa1410410:intron 45.0%
!!! TATTGGAGGAGGGTTTTGAG+GGG + tig0023654:57562-57581 Msa1410410:intron 45.0%
!! AGCAACTTTTGCTTTTGCGG+AGG - tig0023654:58166-58185 None:intergenic 45.0%
GGATCCGAACTTGAATTTCC+AGG + tig0023654:58217-58236 Msa1410410:three_prime_UTR 45.0%
! GCACAATCACCCATTTTGAG+TGG - tig0023654:58261-58280 None:intergenic 45.0%
TACACTTCACAGGACCACAA+AGG + tig0023654:58384-58403 Msa1410410:three_prime_UTR 45.0%
ATTTCCAGACACTTGCATGG+TGG - tig0023654:58475-58494 None:intergenic 45.0%
! AGCTTGATAGCAACCACACA+AGG - tig0023654:58529-58548 None:intergenic 45.0%
TTGGTGTAGTGTAGCTGGGT+GGG - tig0023654:49940-49959 None:intergenic 50.0%
! TTTGGTGTAGTGTAGCTGGG+TGG - tig0023654:49941-49960 None:intergenic 50.0%
CACTACCGATCTTCCTACCA+AGG - tig0023654:50490-50509 None:intergenic 50.0%
CTTGGTAGGAAGATCGGTAG+TGG + tig0023654:50488-50507 Msa1410410:CDS 50.0%
! GATCGGTAGTGGTTCCTTTG+GGG + tig0023654:50499-50518 Msa1410410:CDS 50.0%
TTGGGGGTAGATGGAGGAAA+TGG - tig0023654:51001-51020 None:intergenic 50.0%
CTCGCTTCCTATTTCCTTGG+AGG + tig0023654:51048-51067 Msa1410410:intron 50.0%
TGAGCACCCTCCAAGGAAAT+AGG - tig0023654:51058-51077 None:intergenic 50.0%
TGAGCTGCTACACTGTCTCA+TGG + tig0023654:51245-51264 Msa1410410:intron 50.0%
TTTCCGAGGAGTGAGTGGAA+TGG - tig0023654:51357-51376 None:intergenic 50.0%
TCATGAATTGAGGGGGACAC+CGG - tig0023654:51384-51403 None:intergenic 50.0%
TGCTGATCAAATGGTAGGCC+CGG + tig0023654:51905-51924 Msa1410410:intron 50.0%
ATGCATATCGACGTGCATGC+AGG + tig0023654:52179-52198 Msa1410410:intron 50.0%
TATACGTGGGGTCAGCTACA+TGG - tig0023654:52794-52813 None:intergenic 50.0%
TGTAGCTGACCCCACGTATA+AGG + tig0023654:52794-52813 Msa1410410:intron 50.0%
ATAGGAACATAGGAGCCCTC+GGG - tig0023654:53153-53172 None:intergenic 50.0%
GATAGGAACATAGGAGCCCT+CGG - tig0023654:53154-53173 None:intergenic 50.0%
CGCATGTCAGAAGTGGAAAG+CGG + tig0023654:53299-53318 Msa1410410:intron 50.0%
CCTGGTCTAAGCAGACAGAA+TGG - tig0023654:53387-53406 None:intergenic 50.0%
CCATTCTGTCTGCTTAGACC+AGG + tig0023654:53384-53403 Msa1410410:intron 50.0%
CTAGCGGGATGCAGGAAAAT+AGG - tig0023654:53570-53589 None:intergenic 50.0%
!! AGGATTTTCTAGCGGGATGC+AGG - tig0023654:53578-53597 None:intergenic 50.0%
GCTAGCGTATCTTGCAGTTC+CGG - tig0023654:54306-54325 None:intergenic 50.0%
TGATGTACTTCCTGAGAGGG+AGG + tig0023654:54490-54509 Msa1410410:CDS 50.0%
! CCTTACTCCAGGCCTTATGT+CGG + tig0023654:54752-54771 Msa1410410:intron 50.0%
! CTTACTCCAGGCCTTATGTC+GGG + tig0023654:54753-54772 Msa1410410:intron 50.0%
! TTACTCCAGGCCTTATGTCG+GGG + tig0023654:54754-54773 Msa1410410:intron 50.0%
GGTTGGATAACCCCGACATA+AGG - tig0023654:54767-54786 None:intergenic 50.0%
CTTCACGGATAAACAGGTCG+CGG - tig0023654:54870-54889 None:intergenic 50.0%
ACACTTACAATTCCCCGTGC+TGG - tig0023654:55108-55127 None:intergenic 50.0%
!! CTATCAGCACTGGTAACAGC+AGG - tig0023654:55245-55264 None:intergenic 50.0%
GAAGTGGAACCTAAAGGGCT+TGG + tig0023654:55419-55438 Msa1410410:intron 50.0%
! GGGCTTGGTCAAACGTAGTT+AGG + tig0023654:55434-55453 Msa1410410:intron 50.0%
CCGAGCTCAAAATCACATGC+AGG - tig0023654:55506-55525 None:intergenic 50.0%
CTGTCTCTTACAGGAGCAGA+AGG + tig0023654:55783-55802 Msa1410410:intron 50.0%
ATCCACCGAAACCAAACCAG+GGG - tig0023654:55814-55833 None:intergenic 50.0%
GAATCCACCGAAACCAAACC+AGG - tig0023654:55816-55835 None:intergenic 50.0%
! TGGTTTCGGTGGATTCCTCT+AGG + tig0023654:55820-55839 Msa1410410:CDS 50.0%
TTCCTCTAGGCGCAGAATGT+CGG + tig0023654:55833-55852 Msa1410410:CDS 50.0%
GGGTGTGTTGGGAAATGGAA+AGG + tig0023654:55973-55992 Msa1410410:intron 50.0%
TGGGAAATGGAAAGGGAGAG+AGG + tig0023654:55981-56000 Msa1410410:intron 50.0%
GGGAAATGGAAAGGGAGAGA+GGG + tig0023654:55982-56001 Msa1410410:intron 50.0%
GTCAACACTCAACACTGACG+AGG + tig0023654:56309-56328 Msa1410410:intron 50.0%
! CTGGGTTTTCCAAATTGCCG+AGG - tig0023654:56481-56500 None:intergenic 50.0%
CCGTCCCAAACACAATAGTG+TGG - tig0023654:56825-56844 None:intergenic 50.0%
CCGGTTAATCAACGCTGACA+AGG - tig0023654:57150-57169 None:intergenic 50.0%
AAATAACCCCTCGTGCAAGG+TGG + tig0023654:57321-57340 Msa1410410:intron 50.0%
ATCTAACCACCTTGCACGAG+GGG - tig0023654:57330-57349 None:intergenic 50.0%
CATCTAACCACCTTGCACGA+GGG - tig0023654:57331-57350 None:intergenic 50.0%
CTCGTGCAAGGTGGTTAGAT+GGG + tig0023654:57330-57349 Msa1410410:intron 50.0%
TCGTGCAAGGTGGTTAGATG+GGG + tig0023654:57331-57350 Msa1410410:intron 50.0%
TTTGGAGAAAGAGGGGGAGA+GGG - tig0023654:57377-57396 None:intergenic 50.0%
CCCTCTTTCTCCAAAGCCTT+AGG + tig0023654:57382-57401 Msa1410410:intron 50.0%
!! GCCTAAGGCTTTGGAGAAAG+AGG - tig0023654:57386-57405 None:intergenic 50.0%
CAAGTTTGGAGAGGAAGGGA+GGG + tig0023654:57414-57433 Msa1410410:intron 50.0%
AAGTTTGGAGAGGAAGGGAG+GGG + tig0023654:57415-57434 Msa1410410:intron 50.0%
GGGGAGGGGTTTGGAAAAAA+AGG + tig0023654:57434-57453 Msa1410410:intron 50.0%
! TTGTGAGGGAAAGGCTTTGG+GGG + tig0023654:57485-57504 Msa1410410:intron 50.0%
!!! AGGAGGGTTTTGAGGGGTTT+TGG + tig0023654:57568-57587 Msa1410410:intron 50.0%
!!! AGGGTTTTGAGGGGTTTTGG+AGG + tig0023654:57571-57590 Msa1410410:intron 50.0%
!!! GGGTTTTGAGGGGTTTTGGA+GGG + tig0023654:57572-57591 Msa1410410:intron 50.0%
TTTGAGAGTTTGGAGGGGAG+GGG - tig0023654:57643-57662 None:intergenic 50.0%
GTTTGAGAGTTTGGAGGGGA+GGG - tig0023654:57644-57663 None:intergenic 50.0%
TGTTTGAGAGTTTGGAGGGG+AGG - tig0023654:57645-57664 None:intergenic 50.0%
! TTCTATGTGCTGCTGCTCCA+GGG - tig0023654:57951-57970 None:intergenic 50.0%
! ATTCTATGTGCTGCTGCTCC+AGG - tig0023654:57952-57971 None:intergenic 50.0%
TGGGGATCAGAAGATCCGAT+TGG - tig0023654:57997-58016 None:intergenic 50.0%
ATTGGCAGTTCACTTCTGGC+CGG + tig0023654:58303-58322 Msa1410410:three_prime_UTR 50.0%
GTTTCCACCATGCAAGTGTC+TGG + tig0023654:58468-58487 Msa1410410:three_prime_UTR 50.0%
GAACACGCGTGGACAGAGTT+TGG + tig0023654:49983-50002 Msa1410410:five_prime_UTR 55.0%
GCCGGTTGAGCTAGAACTTG+TGG - tig0023654:50909-50928 None:intergenic 55.0%
AATTGCTAGGTCGGACGCCA+TGG + tig0023654:50940-50959 Msa1410410:intron 55.0%
AAGCACTTGAGCACCCTCCA+AGG - tig0023654:51065-51084 None:intergenic 55.0%
! GGGACACCGGTATTTTTCCG+AGG - tig0023654:51371-51390 None:intergenic 55.0%
TTGGACTCGTACAGCAGCTG+AGG - tig0023654:51619-51638 None:intergenic 55.0%
! ATTAGGAAGGCGTGCGAACC+AGG + tig0023654:52081-52100 Msa1410410:CDS 55.0%
CTGACCCCACGTATAAGGCT+TGG + tig0023654:52799-52818 Msa1410410:intron 55.0%
TAGGAACATAGGAGCCCTCG+GGG - tig0023654:53152-53171 None:intergenic 55.0%
AAAATCAGGACCACCGCACC+AGG + tig0023654:53227-53246 Msa1410410:intron 55.0%
GAAGTGGAAAGCGGCCAAAG+CGG + tig0023654:53308-53327 Msa1410410:intron 55.0%
TAAGCTGATGGTTGGGGCCT+TGG + tig0023654:54052-54071 Msa1410410:intron 55.0%
! CCTGCTTTAAGTCCCTGCCA+AGG - tig0023654:54595-54614 None:intergenic 55.0%
CCTTGGCAGGGACTTAAAGC+AGG + tig0023654:54592-54611 Msa1410410:CDS 55.0%
CCGACATAAGGCCTGGAGTA+AGG - tig0023654:54755-54774 None:intergenic 55.0%
GATAACCCCGACATAAGGCC+TGG - tig0023654:54762-54781 None:intergenic 55.0%
CGCGACCTGTTTATCCGTGA+AGG + tig0023654:54868-54887 Msa1410410:CDS 55.0%
!! AGCTTGCTACACCTCCAGCA+CGG + tig0023654:55091-55110 Msa1410410:CDS 55.0%
CTTACAATTCCCCGTGCTGG+AGG - tig0023654:55105-55124 None:intergenic 55.0%
AGCAGGTGGCATTGCAGAAC+TGG - tig0023654:55228-55247 None:intergenic 55.0%
!! TCAGCACTGGTAACAGCAGG+TGG - tig0023654:55242-55261 None:intergenic 55.0%
!! GCAACCCCCTGGTTTGGTTT+CGG + tig0023654:55806-55825 Msa1410410:CDS 55.0%
TCCACCGAAACCAAACCAGG+GGG - tig0023654:55813-55832 None:intergenic 55.0%
TCCTCTAGGCGCAGAATGTC+GGG + tig0023654:55834-55853 Msa1410410:CDS 55.0%
!!! GGGAGGGTTTTAGAGGGCTT+TGG - tig0023654:56124-56143 None:intergenic 55.0%
!! AAGCCCTCTAAAACCCTCCC+CGG + tig0023654:56124-56143 Msa1410410:intron 55.0%
!!! GATCCGGGGAGGGTTTTAGA+GGG - tig0023654:56130-56149 None:intergenic 55.0%
!! TGATCCGGGGAGGGTTTTAG+AGG - tig0023654:56131-56150 None:intergenic 55.0%
ACACTCAACACTGACGAGGG+TGG + tig0023654:56313-56332 Msa1410410:intron 55.0%
CCATCTAACCACCTTGCACG+AGG - tig0023654:57332-57351 None:intergenic 55.0%
CCTCGTGCAAGGTGGTTAGA+TGG + tig0023654:57329-57348 Msa1410410:intron 55.0%
! CTTTGGAGAAAGAGGGGGAG+AGG - tig0023654:57378-57397 None:intergenic 55.0%
GCAAGTTTGGAGAGGAAGGG+AGG + tig0023654:57413-57432 Msa1410410:intron 55.0%
!! GGGGAAGGGAAGGCTTTAGA+GGG - tig0023654:57624-57643 None:intergenic 55.0%
! AGGGGAAGGGAAGGCTTTAG+AGG - tig0023654:57625-57644 None:intergenic 55.0%
TGTTCGTACACGCACTGCTG+AGG + tig0023654:57921-57940 Msa1410410:CDS 55.0%
CTGATCCCCAGAGAGTAGCA+CGG + tig0023654:58007-58026 Msa1410410:CDS 55.0%
!! TGAAAGTGCCCTTAGGGGCA+TGG + tig0023654:58062-58081 Msa1410410:CDS 55.0%
CAAACCGTCCATGCCCCTAA+GGG - tig0023654:58073-58092 None:intergenic 55.0%
CCACGCGTGTTCTGTACGAG+TGG - tig0023654:49975-49994 None:intergenic 60.0%
CCACTCGTACAGAACACGCG+TGG + tig0023654:49972-49991 Msa1410410:five_prime_UTR 60.0%
CCACACAAGTGGAGGAGCCA+TGG - tig0023654:50960-50979 None:intergenic 60.0%
CCATGGCTCCTCCACTTGTG+TGG + tig0023654:50957-50976 Msa1410410:intron 60.0%
GTTGTCAATAGCAGCCGCGC+CGG + tig0023654:53186-53205 Msa1410410:intron 60.0%
TTCCGCTCCGCTATAGCAGC+CGG - tig0023654:53208-53227 None:intergenic 60.0%
! ATGGTTGGGGCCTTGGTGGT+AGG + tig0023654:54059-54078 Msa1410410:intron 60.0%
! GCTTGCTACACCTCCAGCAC+GGG + tig0023654:55092-55111 Msa1410410:CDS 60.0%
CTTGCTACACCTCCAGCACG+GGG + tig0023654:55093-55112 Msa1410410:CDS 60.0%
! GCAGAACTGGTTCCAGCACC+AGG - tig0023654:55215-55234 None:intergenic 60.0%
AGAAGGGCAACCCCCTGGTT+TGG + tig0023654:55800-55819 Msa1410410:CDS 60.0%
!! ACCCCCTGGTTTGGTTTCGG+TGG + tig0023654:55809-55828 Msa1410410:CDS 60.0%
TCCCGACATTCTGCGCCTAG+AGG - tig0023654:55838-55857 None:intergenic 60.0%
TTTGGAGAGGAAGGGAGGGG+AGG + tig0023654:57418-57437 Msa1410410:intron 60.0%
TTGGAGAGGAAGGGAGGGGA+GGG + tig0023654:57419-57438 Msa1410410:intron 60.0%
GAGTTTGGAGGGGAGGGGAA+GGG - tig0023654:57638-57657 None:intergenic 60.0%
AGAGTTTGGAGGGGAGGGGA+AGG - tig0023654:57639-57658 None:intergenic 60.0%
! CCAGACCGTGCTACTCTCTG+GGG - tig0023654:58015-58034 None:intergenic 60.0%
! CCCAGACCGTGCTACTCTCT+GGG - tig0023654:58016-58035 None:intergenic 60.0%
CCCAGAGAGTAGCACGGTCT+GGG + tig0023654:58013-58032 Msa1410410:CDS 60.0%
! TCCCAGACCGTGCTACTCTC+TGG - tig0023654:58017-58036 None:intergenic 60.0%
! AGTGCCCTTAGGGGCATGGA+CGG + tig0023654:58066-58085 Msa1410410:CDS 60.0%
GCAAACCGTCCATGCCCCTA+AGG - tig0023654:58074-58093 None:intergenic 60.0%
! GCGTCGGCGCATGTCAGAAG+TGG + tig0023654:53292-53311 Msa1410410:intron 65.0%
GCTGATGGTTGGGGCCTTGG+TGG + tig0023654:54055-54074 Msa1410410:intron 65.0%
TGGAGAGGAAGGGAGGGGAG+GGG + tig0023654:57420-57439 Msa1410410:intron 65.0%
AGGAAGGGAGGGGAGGGGTT+TGG + tig0023654:57425-57444 Msa1410410:intron 65.0%
TTGGAGGGGAGGGGAAGGGA+AGG - tig0023654:57634-57653 None:intergenic 65.0%
CCCCAGAGAGTAGCACGGTC+TGG + tig0023654:58012-58031 Msa1410410:CDS 65.0%
!! AGCCGCGCCGGCTGCTATAG+CGG + tig0023654:53198-53217 Msa1410410:intron 70.0%
CTCCGCTATAGCAGCCGGCG+CGG - tig0023654:53203-53222 None:intergenic 70.0%
! CGCCGGCTGCTATAGCGGAG+CGG + tig0023654:53203-53222 Msa1410410:intron 70.0%
! AGGCTGCGTCGGCGCATGTC+AGG + tig0023654:53267-53286 Msa1410410:intron 70.0%
CGGCGCATGTCAGGCTGCGT+CGG + tig0023654:53276-53295 Msa1410410:intron 70.0%
GGAGCAGAAGGGCAACCCCC+TGG + tig0023654:55795-55814 Msa1410410:intron 70.0%
! CGCACTGCTGAGGCTAGCCC+TGG + tig0023654:57931-57950 Msa1410410:CDS 70.0%
ACCACCGCACCAGGCCGCGT+CGG + tig0023654:53236-53255 Msa1410410:intron 75.0%
! CAGCCTGACACGCGCCGACG+CGG - tig0023654:53253-53272 None:intergenic 75.0%
CGGCGCGTGTCAGGCTGCGT+CGG + tig0023654:53256-53275 Msa1410410:intron 75.0%
!! TGACACGCGCCGACGCGGCC+TGG - tig0023654:53248-53267 None:intergenic 80.0%
!! AGGCCGCGTCGGCGCGTGTC+AGG + tig0023654:53247-53266 Msa1410410:intron 80.0%
! GCCGACGCGGCCTGGTGCGG+TGG - tig0023654:53240-53259 None:intergenic 85.0%
!! CGCGCCGACGCGGCCTGGTG+CGG - tig0023654:53243-53262 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
tig0023654 gene 49877 58637 49877 ID=Msa1410410;Name=Msa1410410
tig0023654 mRNA 49877 58637 49877 ID=Msa1410410-mRNA-1;Parent=Msa1410410;Name=Msa1410410-mRNA-1;_AED=0.11;_eAED=0.11;_QI=581|1|1|1|0.92|1|14|512|454
tig0023654 exon 49877 50533 49877 ID=Msa1410410-mRNA-1:exon:26522;Parent=Msa1410410-mRNA-1
tig0023654 exon 50624 50664 50624 ID=Msa1410410-mRNA-1:exon:26523;Parent=Msa1410410-mRNA-1
tig0023654 exon 51595 51664 51595 ID=Msa1410410-mRNA-1:exon:26524;Parent=Msa1410410-mRNA-1
tig0023654 exon 51769 51917 51769 ID=Msa1410410-mRNA-1:exon:26525;Parent=Msa1410410-mRNA-1
tig0023654 exon 52007 52102 52007 ID=Msa1410410-mRNA-1:exon:26526;Parent=Msa1410410-mRNA-1
tig0023654 exon 52201 52271 52201 ID=Msa1410410-mRNA-1:exon:26527;Parent=Msa1410410-mRNA-1
tig0023654 exon 54286 54347 54286 ID=Msa1410410-mRNA-1:exon:26528;Parent=Msa1410410-mRNA-1
tig0023654 exon 54448 54511 54448 ID=Msa1410410-mRNA-1:exon:26529;Parent=Msa1410410-mRNA-1
tig0023654 exon 54588 54672 54588 ID=Msa1410410-mRNA-1:exon:26530;Parent=Msa1410410-mRNA-1
tig0023654 exon 54763 54889 54763 ID=Msa1410410-mRNA-1:exon:26531;Parent=Msa1410410-mRNA-1
tig0023654 exon 55037 55119 55037 ID=Msa1410410-mRNA-1:exon:26532;Parent=Msa1410410-mRNA-1
tig0023654 exon 55209 55272 55209 ID=Msa1410410-mRNA-1:exon:26533;Parent=Msa1410410-mRNA-1
tig0023654 exon 55796 55872 55796 ID=Msa1410410-mRNA-1:exon:26534;Parent=Msa1410410-mRNA-1
tig0023654 exon 57826 58637 57826 ID=Msa1410410-mRNA-1:exon:26535;Parent=Msa1410410-mRNA-1
tig0023654 five_prime_UTR 49877 50457 49877 ID=Msa1410410-mRNA-1:five_prime_utr;Parent=Msa1410410-mRNA-1
tig0023654 CDS 50458 50533 50458 ID=Msa1410410-mRNA-1:cds;Parent=Msa1410410-mRNA-1
tig0023654 CDS 50624 50664 50624 ID=Msa1410410-mRNA-1:cds;Parent=Msa1410410-mRNA-1
tig0023654 CDS 51595 51664 51595 ID=Msa1410410-mRNA-1:cds;Parent=Msa1410410-mRNA-1
tig0023654 CDS 51769 51917 51769 ID=Msa1410410-mRNA-1:cds;Parent=Msa1410410-mRNA-1
tig0023654 CDS 52007 52102 52007 ID=Msa1410410-mRNA-1:cds;Parent=Msa1410410-mRNA-1
tig0023654 CDS 52201 52271 52201 ID=Msa1410410-mRNA-1:cds;Parent=Msa1410410-mRNA-1
tig0023654 CDS 54286 54347 54286 ID=Msa1410410-mRNA-1:cds;Parent=Msa1410410-mRNA-1
tig0023654 CDS 54448 54511 54448 ID=Msa1410410-mRNA-1:cds;Parent=Msa1410410-mRNA-1
tig0023654 CDS 54588 54672 54588 ID=Msa1410410-mRNA-1:cds;Parent=Msa1410410-mRNA-1
tig0023654 CDS 54763 54889 54763 ID=Msa1410410-mRNA-1:cds;Parent=Msa1410410-mRNA-1
tig0023654 CDS 55037 55119 55037 ID=Msa1410410-mRNA-1:cds;Parent=Msa1410410-mRNA-1
tig0023654 CDS 55209 55272 55209 ID=Msa1410410-mRNA-1:cds;Parent=Msa1410410-mRNA-1
tig0023654 CDS 55796 55872 55796 ID=Msa1410410-mRNA-1:cds;Parent=Msa1410410-mRNA-1
tig0023654 CDS 57826 58125 57826 ID=Msa1410410-mRNA-1:cds;Parent=Msa1410410-mRNA-1
tig0023654 three_prime_UTR 58126 58637 58126 ID=Msa1410410-mRNA-1:three_prime_utr;Parent=Msa1410410-mRNA-1
Gene Sequence

>Msa1410410

ATGGAACCTCGTGTTGGGAATAAGTTTCGCCTTGGTAGGAAGATCGGTAGTGGTTCCTTTGGGGAGATCTACTTAGGTACTAATATTCAAACTAACGAAGAGGTTGCAATTAAGCTTGAAAATGTCAAGACTAAGCATCCTCAGCTGCTGTACGAGTCCAAGTTGTACAGAATTCTCCAGGGAGGAACTGGAATTCCAAATGTTAGATGGTTTGGAGTAGAGGGAGATTACAATGTTTTAGTGATGGATCTGCTTGGACCTAGTCTTGAAGATCTATTTAACTTTTGTAGTAGAAAGTTATCACTAAAAACAGTTCTTATGCTTGCTGATCAAATGATCAACCGTGTTGAGTTCATTCATTCGAAATCATTTCTACATCGAGATATCAAACCGGATAATTTTCTAATGGGATTAGGAAGGCGTGCGAACCAGGTTTATGCTATTGATTTTGGTCTGGCTAAGAAATACAGAGATAGTTCAACCCATCAACACATTCCTTACAGGGAAAATAAAAATTTGACCGGAACTGCAAGATACGCTAGCATGAATACTCACCTTGGCATTGAACAAAGTCGAAGAGATGATTTAGAGTCTCTTGGTTATGTTTTGATGTACTTCCTGAGAGGGAGTCTTCCTTGGCAGGGACTTAAAGCAGGAACCAAGAAACAGAAGTATGAGAAAATCAGTGAAAAAAAGGTTTCTACATCGATTGAAGCCTTATGTCGGGGTTATCCAACCGAATTTGCATCATACTTCCATTACTGTCGCTCATTAAGGTTTGATGATAAGCCAGATTATGCTTATCTCAAAAGGATATTCCGCGACCTGTTTATCCGTGAAGGATTCCAGTTTGATTATGTGTTTGACTGGACCATCTTGAAGTATCAGCAATCACAGCTTGCTACACCTCCAGCACGGGGAATTGTTCCTGGTGCTGGAACCAGTTCTGCAATGCCACCTGCTGTTACCAGTGCTGATAGACATACAGGAGCAGAAGGGCAACCCCCTGGTTTGGTTTCGGTGGATTCCTCTAGGCGCAGAATGTCGGGACCCATTTTGAATACTTTATCAAGTTCCAATGTCTTGGGTCAATCAAGTGGATCATCTAGGCGAGTTGCTGTTTCTAGTAGTCGTGATGCATTTGTTGGTGCTGAGTCAGATGTTCGTACACGCACTGCTGAGGCTAGCCCTGGAGCAGCAGCACATAGAATTTTGAGCGGTCAAAGAAGTTCACCAATCGGATCTTCTGATCCCCAGAGAGTAGCACGGTCTGGGAGAAATGCTTCTCAAGCCACTAACTATGAAAGTGCCCTTAGGGGCATGGACGGTTTGCAGTTAGAAAATGATGAGAGAACCCATTATTAA
Protein sequence

>Msa1410410

MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFIHSKSFLHRDIKPDNFLMGLGRRANQVYAIDFGLAKKYRDSSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLATPPARGIVPGAGTSSAMPPAVTSADRHTGAEGQPPGLVSVDSSRRRMSGPILNTLSSSNVLGQSSGSSRRVAVSSSRDAFVGAESDVRTRTAEASPGAAAHRILSGQRSSPIGSSDPQRVARSGRNASQATNYESALRGMDGLQLENDERTHY*