AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1454520

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1454520 MtrunA17_Chr4g0071031 98.678 454 6 0 1 454 1 454 0.0 929
Msa1454520 MtrunA17_Chr2g0329981 76.778 478 84 7 1 454 1 475 0.0 728
Msa1454520 MtrunA17_Chr2g0299661 76.170 470 86 5 1 448 1 466 0.0 722
Msa1454520 MtrunA17_Chr8g0342821 74.895 478 92 7 1 454 1 474 0.0 705
Msa1454520 MtrunA17_Chr1g0166821 75.811 339 76 3 1 333 2 340 0.0 547
Msa1454520 MtrunA17_Chr1g0183631 71.667 360 89 4 1 360 1 347 0.0 546
Msa1454520 MtrunA17_Chr7g0261501 81.481 297 55 0 1 297 1 297 0.0 541
Msa1454520 MtrunA17_Chr1g0187571 73.591 337 83 3 1 331 2 338 0.0 531
Msa1454520 MtrunA17_Chr6g0486611 63.070 417 147 4 1 416 1 411 0.0 525
Msa1454520 MtrunA17_Chr8g0390211 68.421 361 112 2 1 360 1 360 0.0 514
Msa1454520 MtrunA17_Chr3g0140071 56.081 444 170 7 1 439 1 424 3.61e-171 487
Msa1454520 MtrunA17_Chr1g0146151 67.073 328 105 1 1 328 1 325 2.71e-166 474
Msa1454520 MtrunA17_Chr1g0167261 72.000 300 82 1 1 298 2 301 3.76e-166 471
Msa1454520 MtrunA17_Chr3g0140431 39.927 273 153 5 9 273 38 307 1.43e-60 207
Msa1454520 MtrunA17_Chr7g0214531 38.351 279 155 5 9 273 37 312 3.22e-60 207
Msa1454520 MtrunA17_Chr1g0146301 38.462 273 157 5 9 273 124 393 7.95e-59 204
Msa1454520 MtrunA17_Chr1g0213321 37.770 278 161 5 9 277 119 393 5.98e-58 202
Msa1454520 MtrunA17_Chr7g0253211 38.754 289 159 6 4 277 317 602 8.57e-58 204
Msa1454520 MtrunA17_Chr8g0340491 36.879 282 156 7 9 273 128 404 1.71e-52 187
Msa1454520 MtrunA17_Chr5g0405421 27.826 230 149 7 2 223 92 312 9.25e-14 73.6
Msa1454520 MtrunA17_Chr8g0374701 27.391 230 139 8 6 219 122 339 2.13e-11 65.9
Msa1454520 MtrunA17_Chr3g0107011 27.500 240 119 11 1 214 5 215 2.43e-11 65.5
Msa1454520 MtrunA17_Chr7g0267751 28.829 222 124 10 9 215 135 337 2.52e-11 65.9
Msa1454520 MtrunA17_Chr1g0157131 28.395 243 139 10 5 233 70 291 8.73e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1454520 AT4G26100.1 73.729 472 83 7 1 453 1 450 0.0 701
Msa1454520 AT5G57015.1 72.961 466 82 8 1 454 1 434 0.0 685
Msa1454520 AT1G72710.1 71.915 470 103 7 1 446 1 465 0.0 660
Msa1454520 AT2G19470.1 66.520 454 103 4 1 449 1 410 0.0 605
Msa1454520 AT3G23340.1 61.556 450 147 8 1 445 1 429 0.0 546
Msa1454520 AT5G44100.1 82.155 297 53 0 1 297 1 297 0.0 545
Msa1454520 AT5G44100.2 82.155 297 53 0 1 297 1 297 0.0 545
Msa1454520 AT1G03930.1 81.818 297 54 0 1 297 1 297 0.0 545
Msa1454520 AT4G28540.1 61.276 439 138 7 1 425 5 425 0.0 529
Msa1454520 AT4G14340.1 60.954 461 148 10 1 446 7 450 0.0 528
Msa1454520 AT5G43320.1 61.538 442 129 8 1 411 1 432 0.0 521
Msa1454520 AT1G04440.1 66.402 378 109 3 1 360 1 378 0.0 521
Msa1454520 AT4G14340.2 73.414 331 85 2 1 331 7 334 0.0 520
Msa1454520 AT5G43320.2 71.940 335 92 1 1 335 1 333 0.0 513
Msa1454520 AT5G43320.3 71.940 335 92 1 1 335 1 333 0.0 513
Msa1454520 AT3G23340.2 60.930 430 142 8 21 445 7 415 0.0 513
Msa1454520 AT4G28880.3 73.041 319 85 1 1 319 1 318 0.0 512
Msa1454520 AT4G28880.2 73.041 319 85 1 1 319 1 318 0.0 512
Msa1454520 AT4G28880.1 73.041 319 85 1 1 319 1 318 0.0 512
Msa1454520 AT4G28880.4 73.041 319 85 1 1 319 1 318 0.0 512
Msa1454520 AT4G28860.2 72.414 319 87 1 1 319 1 318 9.22e-180 507
Msa1454520 AT4G28860.1 72.414 319 87 1 1 319 1 318 2.26e-179 508
Msa1454520 AT4G08800.1 70.627 303 57 2 1 303 1 271 2.21e-159 452
Msa1454520 AT2G25760.2 40.070 287 155 5 4 273 100 386 6.66e-64 218
Msa1454520 AT2G25760.1 39.373 287 154 6 4 273 100 383 9.51e-61 210
Msa1454520 AT3G03940.1 39.446 289 157 6 4 277 133 418 1.08e-59 207
Msa1454520 AT5G18190.2 39.100 289 158 6 4 277 123 408 2.10e-59 206
Msa1454520 AT5G18190.1 39.100 289 158 6 4 277 123 408 2.10e-59 206
Msa1454520 AT3G13670.1 36.749 283 162 5 9 277 137 416 4.31e-57 201
Msa1454520 AT2G17890.1 26.667 225 148 8 7 223 106 321 6.33e-13 71.2
Msa1454520 AT3G50530.1 27.234 235 130 8 6 219 145 359 2.80e-12 69.3
Msa1454520 AT3G06030.1 27.602 221 131 9 8 213 67 273 2.78e-11 66.2
Msa1454520 AT5G58380.1 27.660 235 112 10 7 214 10 213 3.14e-11 65.9
Msa1454520 AT4G36070.2 25.792 221 147 7 7 219 69 280 7.89e-11 64.7
Msa1454520 AT1G54960.1 27.615 239 132 12 8 229 67 281 8.32e-11 64.7
Msa1454520 AT1G54960.2 27.615 239 132 12 8 229 67 281 8.32e-11 64.7
Msa1454520 AT4G36070.1 25.792 221 147 7 7 219 69 280 8.67e-11 64.3

Find 154 sgRNAs with CRISPR-Local

Find 708 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCTCATACTTCTGTTTCT+TGG 0.175329 tig0035254:-6789 None:intergenic
TACAACCCTTAATTCAAAAT+TGG 0.188978 tig0035254:-2555 None:intergenic
ATTAACTCATCCACTCAAAA+TGG 0.212689 tig0035254:+10420 Msa1454520:three_prime_UTR
ATCACCTTTGTTTAGGTTCC+TGG 0.223280 tig0035254:+7366 Msa1454520:intron
GGTTGTAGTTGTTGTGATTA+GGG 0.242352 tig0035254:+2571 Msa1454520:five_prime_UTR
GAAAGCGTAAGAATAGATTT+TGG 0.249403 tig0035254:-2300 None:intergenic
TCCATTACTGTCGCTCATTA+AGG 0.251089 tig0035254:+6975 Msa1454520:CDS
CAGGTTTATGCTATTGATTT+TGG 0.265027 tig0035254:+4368 Msa1454520:intron
AGTTGAGCTGTGAGAAAATT+TGG 0.268018 tig0035254:+10368 Msa1454520:three_prime_UTR
TATGGTTACTCTCAAATTAT+AGG 0.282900 tig0035254:+2044 Msa1454520:five_prime_UTR
ATTCCAAATGTTAGATGGTT+TGG 0.290598 tig0035254:+3944 Msa1454520:CDS
GGGTTGTAGTTGTTGTGATT+AGG 0.307538 tig0035254:+2570 Msa1454520:five_prime_UTR
TTTAATTGGCAGTTCACTTC+TGG 0.308157 tig0035254:+10471 Msa1454520:three_prime_UTR
GAAACTTACAGTATTCAAAA+TGG 0.319132 tig0035254:-8031 None:intergenic
TATCATTACTCATACAAATA+TGG 0.331488 tig0035254:+2026 None:intergenic
AGATCGGTAGTGGTTCCTTT+GGG 0.333216 tig0035254:+2668 Msa1454520:CDS
CAAGTGTCTGGAAATTATTC+TGG 0.335403 tig0035254:+10652 Msa1454520:three_prime_UTR
CTGTAAAGTTCAGATTTAAT+TGG 0.338684 tig0035254:+10457 Msa1454520:three_prime_UTR
TTTGTTTAGGTTCCTGGTGC+TGG 0.338785 tig0035254:+7372 Msa1454520:intron
CCCATCAACACATTCCTTAC+AGG 0.339922 tig0035254:+4420 Msa1454520:CDS
CTGGAATTCCAAATGTTAGA+TGG 0.344906 tig0035254:+3939 Msa1454520:CDS
CGAGTGGTGTTTACTTCTTT+TGG 0.353051 tig0035254:-2119 None:intergenic
TTTCCTGTATGTTACTGTAT+TGG 0.366145 tig0035254:+10520 Msa1454520:three_prime_UTR
GTAACGGAAGAATATGAAAA+AGG 0.369742 tig0035254:-2463 None:intergenic
GTTTCCACCATGCAAGTGTC+TGG 0.383466 tig0035254:+10640 Msa1454520:three_prime_UTR
ATTCTATGTGCTGCTGCTCC+AGG 0.385424 tig0035254:-10121 None:intergenic
AAGGGCACTTTCATAGTTAG+TGG 0.388491 tig0035254:-10224 None:intergenic
TTATTCTGGTATTAGAAACT+TGG 0.388819 tig0035254:+10666 Msa1454520:three_prime_UTR
AGCAGGTGGCATTGCAGAAC+TGG 0.388903 tig0035254:-7397 None:intergenic
TCAAACCTTCACGGATAAAC+AGG 0.392297 tig0035254:-7045 None:intergenic
TCCTCTAGGCGCAGAATGTC+GGG 0.395147 tig0035254:+8006 Msa1454520:CDS
ACTCCAAACCATCTAACATT+TGG 0.400425 tig0035254:-3947 None:intergenic
CTAACTATGAAAGTGCCCTT+AGG 0.400516 tig0035254:+10227 Msa1454520:CDS
CCCCAGAGAGTAGCACGGTC+TGG 0.400537 tig0035254:+10184 Msa1454520:CDS
CCCAGACCGTGCTACTCTCT+GGG 0.401614 tig0035254:-10185 None:intergenic
CTTACTCCAGGCCTTATGTC+GGG 0.404462 tig0035254:+6925 Msa1454520:intron
AGTCAAACACATAATCAAAC+TGG 0.409250 tig0035254:-7213 None:intergenic
AAGATCGGTAGTGGTTCCTT+TGG 0.414217 tig0035254:+2667 Msa1454520:CDS
GCTAGCGTATCTTGCAGTTC+CGG 0.415896 tig0035254:-6475 None:intergenic
AGATTACTATGGAAGATAAC+TGG 0.419271 tig0035254:-10749 None:intergenic
GTTATCAAGTTCCAATGTCT+TGG 0.426850 tig0035254:+9997 Msa1454520:intron
GGATCCGAACTTGAATTTCC+AGG 0.429190 tig0035254:+10389 Msa1454520:three_prime_UTR
AGTAGTCGTGATGCATTTGT+TGG 0.429883 tig0035254:+10058 Msa1454520:CDS
CGCACTGCTGAGGCTAGCCC+TGG 0.430913 tig0035254:+10103 Msa1454520:CDS
CAGATTATGCTTATCTCAAA+AGG 0.437611 tig0035254:+7011 Msa1454520:CDS
AATCCCATTAGAAAATTATC+CGG 0.440273 tig0035254:-4231 None:intergenic
TCCTTTGGGGAGATCTACTT+AGG 0.441242 tig0035254:+2682 Msa1454520:CDS
TGTTAGATGGTTTGGAGTAG+AGG 0.442717 tig0035254:+3952 Msa1454520:CDS
ATGGAAGTATGATGCAAATT+CGG 0.452550 tig0035254:-6957 None:intergenic
ACCTGTAAGGAATGTGTTGA+TGG 0.455255 tig0035254:-4421 None:intergenic
TCTTATGCTTGCTGATCAAA+TGG 0.455843 tig0035254:+4066 Msa1454520:CDS
GTTAGATGGTTTGGAGTAGA+GGG 0.456466 tig0035254:+3953 Msa1454520:CDS
GTAATAATTACCTCCCTCTC+AGG 0.458309 tig0035254:-6672 None:intergenic
TAACTATGAAAGTGCCCTTA+GGG 0.461605 tig0035254:+10228 Msa1454520:CDS
AGAGATGATTTAGAGTCTCT+TGG 0.461724 tig0035254:+6631 Msa1454520:CDS
TGGTTTCGGTGGATTCCTCT+AGG 0.466343 tig0035254:+7992 Msa1454520:CDS
AGTTTGATTATGTGTTTGAC+TGG 0.466635 tig0035254:+7215 Msa1454520:CDS
ACTAAATCTTTGTACCTGTA+AGG 0.467328 tig0035254:-4434 None:intergenic
ACCTGATGTTTACACTTCAC+AGG 0.468359 tig0035254:+10546 Msa1454520:three_prime_UTR
GCGAGATCTAGGATAGGATA+AGG 0.470135 tig0035254:-2413 None:intergenic
CGCGACCTGTTTATCCGTGA+AGG 0.474225 tig0035254:+7040 Msa1454520:CDS
CTGGAGAATTCTGTACAACT+TGG 0.479580 tig0035254:-3805 None:intergenic
CCCAGAGAGTAGCACGGTCT+GGG 0.480250 tig0035254:+10185 Msa1454520:CDS
ATTAGGAAGGCGTGCGAACC+AGG 0.481817 tig0035254:+4251 Msa1454520:CDS
TTATCAAGTTCCAATGTCTT+GGG 0.487659 tig0035254:+9998 Msa1454520:CDS
AAACTTACAGTATTCAAAAT+GGG 0.489433 tig0035254:-8030 None:intergenic
GAATCCACCGAAACCAAACC+AGG 0.492539 tig0035254:-7985 None:intergenic
TCCTGTGAAGTGTAAACATC+AGG 0.496749 tig0035254:-10547 None:intergenic
TTCCTCTAGGCGCAGAATGT+CGG 0.497991 tig0035254:+8005 Msa1454520:CDS
CAACAAGAGTAAAATTTCAA+TGG 0.500149 tig0035254:-10602 None:intergenic
CAAGTTGTACAGAATTCTCC+AGG 0.500434 tig0035254:+3806 Msa1454520:CDS
TTAACTCATCCACTCAAAAT+GGG 0.501144 tig0035254:+10421 Msa1454520:three_prime_UTR
ACCAGTGCTGATAGACATAC+AGG 0.504504 tig0035254:+7423 Msa1454520:CDS
AAATTGATAGAGCGAGATCT+AGG 0.504513 tig0035254:-2424 None:intergenic
GGTTGGATAACCCCGACATA+AGG 0.505765 tig0035254:-6936 None:intergenic
GCTTGCTACACCTCCAGCAC+GGG 0.506533 tig0035254:+7264 Msa1454520:CDS
AATGTCGTACAAGATTACTA+TGG 0.506752 tig0035254:-10760 None:intergenic
TTTGAATGGAACCTCGTGTT+GGG 0.509162 tig0035254:+2623 Msa1454520:exon
CCTTACTCCAGGCCTTATGT+CGG 0.510981 tig0035254:+6924 Msa1454520:intron
ATGAATACTCACCTTGGCAT+TGG 0.516193 tig0035254:+6498 Msa1454520:CDS
CAAACCTGGAAATTCAAGTT+CGG 0.523331 tig0035254:-10393 None:intergenic
GCAAACCGTCCATGCCCCTA+AGG 0.525024 tig0035254:-10243 None:intergenic
ACACTTACAATTCCCCGTGC+TGG 0.533191 tig0035254:-7277 None:intergenic
ACCTGTATGTCTATCAGCAC+TGG 0.535307 tig0035254:-7424 None:intergenic
CCTTGGCAGGGACTTAAAGC+AGG 0.537413 tig0035254:+6764 Msa1454520:CDS
AGCTTGCTACACCTCCAGCA+CGG 0.539768 tig0035254:+7263 Msa1454520:CDS
AAACCAATACAGTAACATAC+AGG 0.540468 tig0035254:-10523 None:intergenic
GCAGAACTGGTTCCAGCACC+AGG 0.542045 tig0035254:-7384 None:intergenic
TGAAAGTGCCCTTAGGGGCA+TGG 0.545914 tig0035254:+10234 Msa1454520:CDS
ACTTGATTGACCCAAGACAT+TGG 0.547957 tig0035254:-10008 None:intergenic
AATAGTCATTACTTCCTCCC+TGG 0.548168 tig0035254:-3824 None:intergenic
TTTCGCCTTGGTAGGAAGAT+CGG 0.549005 tig0035254:+2652 Msa1454520:CDS
ACTTGCATGGTGGAAACTAA+AGG 0.549765 tig0035254:-10634 None:intergenic
GTTGGGAATAAGTTTCGCCT+TGG 0.555446 tig0035254:+2640 Msa1454520:CDS
TCATTCTTTCTTGCAACCGT+CGG 0.560676 tig0035254:-2200 None:intergenic
CTGTCTCTTACAGGAGCAGA+AGG 0.562373 tig0035254:+7955 Msa1454520:intron
ACCTTAATGAGCGACAGTAA+TGG 0.563244 tig0035254:-6976 None:intergenic
TTAAATAGATCTTCAAGACT+AGG 0.564483 tig0035254:-4010 None:intergenic
TTCTATGTGCTGCTGCTCCA+GGG 0.567837 tig0035254:-10120 None:intergenic
CTTGGTAGGAAGATCGGTAG+TGG 0.568381 tig0035254:+2658 Msa1454520:CDS
AAGTATGATGCAAATTCGGT+TGG 0.569583 tig0035254:-6953 None:intergenic
GGAATAAGTTTCGCCTTGGT+AGG 0.570201 tig0035254:+2644 Msa1454520:CDS
CTATCAGCACTGGTAACAGC+AGG 0.574738 tig0035254:-7414 None:intergenic
AGTGCCCTTAGGGGCATGGA+CGG 0.576647 tig0035254:+10238 Msa1454520:CDS
GGTCAAAGAAGTTCACCAAT+CGG 0.577532 tig0035254:+10151 Msa1454520:CDS
TTGGTGTAGTGTATCTGGGT+GGG 0.578142 tig0035254:-2100 None:intergenic
TTACTCCAGGCCTTATGTCG+GGG 0.581815 tig0035254:+6926 Msa1454520:intron
GTCAATCAAGTGGATCATCT+AGG 0.582343 tig0035254:+10020 Msa1454520:CDS
ATTGGCAGTTCACTTCTGGC+CGG 0.586488 tig0035254:+10475 Msa1454520:three_prime_UTR
CAAACCGTCCATGCCCCTAA+GGG 0.586507 tig0035254:-10242 None:intergenic
TCTACATCGAGATATCAAAC+CGG 0.587386 tig0035254:+4212 Msa1454520:CDS
AATGTCTTGGGTCAATCAAG+TGG 0.599106 tig0035254:+10010 Msa1454520:CDS
AAACTACAATCTTCATGACT+AGG 0.602390 tig0035254:-2077 None:intergenic
AGCTTGATAGCAACCACACA+AGG 0.602927 tig0035254:-10698 None:intergenic
TGATGTACTTCCTGAGAGGG+AGG 0.604380 tig0035254:+6662 Msa1454520:CDS
GATAGAGCGAGATCTAGGAT+AGG 0.604596 tig0035254:-2419 None:intergenic
TTGGACTCGTACAGCAGCTG+AGG 0.611846 tig0035254:-3786 None:intergenic
CTTACAATTCCCCGTGCTGG+AGG 0.614854 tig0035254:-7274 None:intergenic
ATTTGAATGGAACCTCGTGT+TGG 0.616512 tig0035254:+2622 Msa1454520:exon
ATGAGTTAATAATACAAACC+TGG 0.618802 tig0035254:-10407 None:intergenic
ATAATTTCCAGACACTTGCA+TGG 0.621668 tig0035254:-10647 None:intergenic
TAATATTCAAACTAACGAAG+AGG 0.623322 tig0035254:+2798 Msa1454520:CDS
TGTTCGTACACGCACTGCTG+AGG 0.626085 tig0035254:+10093 Msa1454520:CDS
GATCGGTAGTGGTTCCTTTG+GGG 0.627195 tig0035254:+2669 Msa1454520:CDS
AGAGTTTGGAAGTCCGACAA+AGG 0.632047 tig0035254:+2160 Msa1454520:five_prime_UTR
TTTGGTGTAGTGTATCTGGG+TGG 0.632780 tig0035254:-2101 None:intergenic
TGGGGATCAGAAGATCCGAT+TGG 0.639979 tig0035254:-10166 None:intergenic
CCTGTAAGGAATGTGTTGAT+GGG 0.643929 tig0035254:-4420 None:intergenic
CACTACCGATCTTCCTACCA+AGG 0.644344 tig0035254:-2657 None:intergenic
TCCCGACATTCTGCGCCTAG+AGG 0.644999 tig0035254:-8007 None:intergenic
AACTATGAAAGTGCCCTTAG+GGG 0.645280 tig0035254:+10229 Msa1454520:CDS
CCTGCTTTAAGTCCCTGCCA+AGG 0.645862 tig0035254:-6764 None:intergenic
CTTCACGGATAAACAGGTCG+CGG 0.654448 tig0035254:-7039 None:intergenic
ATTTCCAGACACTTGCATGG+TGG 0.654959 tig0035254:-10644 None:intergenic
ACCTAAGTAGATCTCCCCAA+AGG 0.656641 tig0035254:-2683 None:intergenic
TGATTGCTGATACTTCAAGA+TGG 0.656935 tig0035254:-7239 None:intergenic
CGAAACTTATTCCCAACACG+AGG 0.659639 tig0035254:-2634 None:intergenic
ACTAACACATACCAATGCCA+AGG 0.659734 tig0035254:-6509 None:intergenic
TCAGCACTGGTAACAGCAGG+TGG 0.661755 tig0035254:-7411 None:intergenic
GCTAGCATGAATACTCACCT+TGG 0.662753 tig0035254:+6492 Msa1454520:CDS
TCGAATGAATGAACTCAACA+CGG 0.674813 tig0035254:-4182 None:intergenic
TACACTTCACAGGACCACAA+AGG 0.676644 tig0035254:+10556 Msa1454520:three_prime_UTR
CTTGCTACACCTCCAGCACG+GGG 0.676948 tig0035254:+7265 Msa1454520:CDS
CTGATCCCCAGAGAGTAGCA+CGG 0.679049 tig0035254:+10179 Msa1454520:CDS
ATCCACCGAAACCAAACCAG+GGG 0.683167 tig0035254:-7983 None:intergenic
TGTCTCTTACAGGAGCAGAA+GGG 0.684538 tig0035254:+7956 Msa1454520:intron
CCAGACCGTGCTACTCTCTG+GGG 0.692058 tig0035254:-10184 None:intergenic
CCACTCGTACAGAACACGCG+TGG 0.698598 tig0035254:+2135 Msa1454520:five_prime_UTR
AATCCACCGAAACCAAACCA+GGG 0.699645 tig0035254:-7984 None:intergenic
CCACGCGTGTTCTGTACGAG+TGG 0.711173 tig0035254:-2135 None:intergenic
AAGTTGTACAGAATTCTCCA+GGG 0.726240 tig0035254:+3807 Msa1454520:CDS
TTATTGAAAGAAGAGCGTAA+CGG 0.755909 tig0035254:-2479 None:intergenic
TCCACCGAAACCAAACCAGG+GGG 0.759140 tig0035254:-7982 None:intergenic
TTGTACAGAATTCTCCAGGG+AGG 0.760608 tig0035254:+3810 Msa1454520:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAGCAATAATAAAATT+TGG - tig0035254:2599-2618 None:intergenic 10.0%
!! TTAAAAATTACTAAAAGAAA+GGG - tig0035254:4132-4151 None:intergenic 10.0%
!!! GTTATTGTTTTATTATTTAT+AGG - tig0035254:5507-5526 None:intergenic 10.0%
!!! CTAATTTATAATTTTCAATT+AGG + tig0035254:8447-8466 Msa1454520:intron 10.0%
!! TAAATAAAAATATAATGATG+TGG - tig0035254:8553-8572 None:intergenic 10.0%
!! AAATGATAAATAATCATTAA+GGG + tig0035254:8699-8718 Msa1454520:intron 10.0%
!!! TACACATTTTTTTAAAATTT+AGG + tig0035254:9400-9419 Msa1454520:intron 10.0%
!!! ACACATTTTTTTAAAATTTA+GGG + tig0035254:9401-9420 Msa1454520:intron 10.0%
!!! TTTTAATTTTTTTCCTTTGT+CGG - tig0035254:2176-2195 None:intergenic 15.0%
!!! TATTGGTTAAAAAAAATTGA+GGG - tig0035254:2360-2379 None:intergenic 15.0%
!!! TTATTGGTTAAAAAAAATTG+AGG - tig0035254:2361-2380 None:intergenic 15.0%
!!! ATATTTCCAATTTTGAATTA+AGG + tig0035254:2549-2568 Msa1454520:five_prime_UTR 15.0%
!!! TATTTCCAATTTTGAATTAA+GGG + tig0035254:2550-2569 Msa1454520:five_prime_UTR 15.0%
!!! TTTTTCCTATGTTTATTATT+TGG + tig0035254:2739-2758 Msa1454520:intron 15.0%
!!! ATTATTTTTGTTAATTGTGT+AGG + tig0035254:2772-2791 Msa1454520:intron 15.0%
!!! AGTAAAGATACTTTTTTTTT+GGG - tig0035254:3189-3208 None:intergenic 15.0%
!! CTTAAAAATTACTAAAAGAA+AGG - tig0035254:4133-4152 None:intergenic 15.0%
!! TATTTGTATGCATATTTATT+TGG - tig0035254:4676-4695 None:intergenic 15.0%
!!! AGATTTTTTTGCTTATAATT+CGG - tig0035254:5912-5931 None:intergenic 15.0%
!!! ATTTGCATTTAATTTTACTT+TGG - tig0035254:6015-6034 None:intergenic 15.0%
!!! TGTATTTTTTGCTTATAAAT+TGG + tig0035254:6182-6201 Msa1454520:intron 15.0%
!!! GTATTTTTTGCTTATAAATT+GGG + tig0035254:6183-6202 Msa1454520:intron 15.0%
!!! TATTTGTAAGTTCTTTTTTT+GGG + tig0035254:6398-6417 Msa1454520:intron 15.0%
!!! GAAATTTTTATCATATAGAA+AGG + tig0035254:7066-7085 Msa1454520:intron 15.0%
!! CATACAAATAAAAATATTGA+AGG - tig0035254:7479-7498 None:intergenic 15.0%
!! AAAACTTAAATCTTCATATA+GGG - tig0035254:8342-8361 None:intergenic 15.0%
!! AAAAACTTAAATCTTCATAT+AGG - tig0035254:8343-8362 None:intergenic 15.0%
!!! TATATGAAGATTTAAGTTTT+TGG + tig0035254:8342-8361 Msa1454520:intron 15.0%
!!! ACTATTTGAGAATTTTTAAA+TGG + tig0035254:8389-8408 Msa1454520:intron 15.0%
!! GAAAATTATAAATTAGTTCA+GGG - tig0035254:8443-8462 None:intergenic 15.0%
!! TGAAAATTATAAATTAGTTC+AGG - tig0035254:8444-8463 None:intergenic 15.0%
!! GAAATGATAAATAATCATTA+AGG + tig0035254:8698-8717 Msa1454520:intron 15.0%
!!! TTGTTTTTGCATTAATATTT+AGG + tig0035254:8839-8858 Msa1454520:intron 15.0%
!! AAAATGAGTATTCAATTAAA+AGG + tig0035254:8904-8923 Msa1454520:intron 15.0%
!! AAATGAGTATTCAATTAAAA+GGG + tig0035254:8905-8924 Msa1454520:intron 15.0%
!! TGTATAAAAATTCAAAATTG+AGG - tig0035254:9136-9155 None:intergenic 15.0%
!!! TAAATAAAAATATGATGATG+TGG + tig0035254:9250-9269 Msa1454520:intron 15.0%
!! TTGAAAGTTATAAATAGTTT+AGG + tig0035254:9369-9388 Msa1454520:intron 15.0%
!! TGAAAGTTATAAATAGTTTA+GGG + tig0035254:9370-9389 Msa1454520:intron 15.0%
!!! CTATTTACGAATTTTTTAAT+AGG - tig0035254:9428-9447 None:intergenic 15.0%
!! AAAAAATTCGTAAATAGTTT+AGG + tig0035254:9431-9450 Msa1454520:intron 15.0%
!! AAAAATTCGTAAATAGTTTA+GGG + tig0035254:9432-9451 Msa1454520:intron 15.0%
!!! ATTAAACCTAAGTTTTATTA+TGG + tig0035254:9466-9485 Msa1454520:intron 15.0%
!! GAACATGAAAAATTAATAAT+GGG - tig0035254:10290-10309 None:intergenic 15.0%
!! AGAACATGAAAAATTAATAA+TGG - tig0035254:10291-10310 None:intergenic 15.0%
!! AAAAAATTAAAAAGAACCGA+CGG + tig0035254:2184-2203 Msa1454520:five_prime_UTR 20.0%
!!! TAAGAATAGATTTTGGATAA+TGG - tig0035254:2296-2315 None:intergenic 20.0%
!!! GAGTAATTGTGTTTTATTAT+TGG - tig0035254:2377-2396 None:intergenic 20.0%
!!! TTGCTTTTTTTGAATTTGAA+TGG + tig0035254:2609-2628 Msa1454520:exon 20.0%
!!! AAATAATAATGATGATGAGA+AGG - tig0035254:2720-2739 None:intergenic 20.0%
!! CATAACCAAATAATAAACAT+AGG - tig0035254:2747-2766 None:intergenic 20.0%
!! ATAAACACACACAAAAAAAA+GGG - tig0035254:2894-2913 None:intergenic 20.0%
!!! TTTTTTTTGTGTGTGTTTAT+GGG + tig0035254:2894-2913 Msa1454520:intron 20.0%
!! AGGGTTTATAATATCAAATT+TGG + tig0035254:2961-2980 Msa1454520:intron 20.0%
!! ATGTCATTAAGATTTAAGAA+TGG - tig0035254:3008-3027 None:intergenic 20.0%
!! TTCTTAAATCTTAATGACAT+TGG + tig0035254:3008-3027 Msa1454520:intron 20.0%
!!! TAAAGATACTTTTTTTTTGG+GGG - tig0035254:3187-3206 None:intergenic 20.0%
!!! GTAAAGATACTTTTTTTTTG+GGG - tig0035254:3188-3207 None:intergenic 20.0%
!!! CAGTAAAGATACTTTTTTTT+TGG - tig0035254:3190-3209 None:intergenic 20.0%
!! TTCAATTGAATAAACAAAGT+AGG - tig0035254:3503-3522 None:intergenic 20.0%
!! ATTGTGATGAATAATATCTT+TGG + tig0035254:3573-3592 Msa1454520:intron 20.0%
!! AATTATGACTTAACATTATG+AGG + tig0035254:3633-3652 Msa1454520:intron 20.0%
!!! ATGCACTATTATAGTTTTAT+TGG + tig0035254:4640-4659 Msa1454520:intron 20.0%
!!! TGCACTATTATAGTTTTATT+GGG + tig0035254:4641-4660 Msa1454520:intron 20.0%
!! TATATAGAATTTGTGATATC+TGG + tig0035254:4788-4807 Msa1454520:intron 20.0%
!! ATATAGAATTTGTGATATCT+GGG + tig0035254:4789-4808 Msa1454520:intron 20.0%
!!! TTCTATCATAAACCATATTT+TGG - tig0035254:4924-4943 None:intergenic 20.0%
!! CATTGAAATCTATTCAAATT+TGG - tig0035254:5015-5034 None:intergenic 20.0%
!! CAAATTTGAATAGATTTCAA+TGG + tig0035254:5013-5032 Msa1454520:intron 20.0%
!! AGCAAGTTAAATTCTATTAT+TGG - tig0035254:5051-5070 None:intergenic 20.0%
!! GGTTAATAATGAAAGATAAA+CGG + tig0035254:5089-5108 Msa1454520:intron 20.0%
!! TTGTACTAGTTGTATATAAT+TGG + tig0035254:5527-5546 Msa1454520:intron 20.0%
!! CTATCAGGAATATATTATTT+AGG - tig0035254:5676-5695 None:intergenic 20.0%
!!! AATTCAAGTTTTCTTTTAAC+TGG - tig0035254:5774-5793 None:intergenic 20.0%
!!! AAGTTGATAACAAATATAGA+TGG - tig0035254:5836-5855 None:intergenic 20.0%
!!! GATTTTTTTGCTTATAATTC+GGG - tig0035254:5911-5930 None:intergenic 20.0%
!! CAAAATAATAGCATAAAAGT+TGG - tig0035254:5969-5988 None:intergenic 20.0%
!!! TTTGGAAAAGATGATTTTTT+TGG - tig0035254:5997-6016 None:intergenic 20.0%
!! TTCTTATTGGATAATGATTA+TGG - tig0035254:6069-6088 None:intergenic 20.0%
!! GATGTAAAAACAATTCTTAT+TGG - tig0035254:6082-6101 None:intergenic 20.0%
!!! CTATTTGTAAGTTCTTTTTT+TGG + tig0035254:6397-6416 Msa1454520:intron 20.0%
!!! ATTTGTAAGTTCTTTTTTTG+GGG + tig0035254:6399-6418 Msa1454520:intron 20.0%
!! GTTAAATTGAATGTTGTAAT+CGG + tig0035254:6849-6868 Msa1454520:intron 20.0%
!! ATAAAAATTTCAAACCTTCA+CGG - tig0035254:7057-7076 None:intergenic 20.0%
!! TATTAAATTGACACTTTAAC+AGG + tig0035254:7187-7206 Msa1454520:intron 20.0%
!!! ATTTTAGGGTCTTAATTTTA+GGG - tig0035254:7739-7758 None:intergenic 20.0%
!!! AATTTTAGGGTCTTAATTTT+AGG - tig0035254:7740-7759 None:intergenic 20.0%
!! AAAATTAAGACCCTAAAATT+AGG + tig0035254:7740-7759 Msa1454520:intron 20.0%
!! AGTAGATATCATTTAAACTT+GGG - tig0035254:7906-7925 None:intergenic 20.0%
!! AAGTAGATATCATTTAAACT+TGG - tig0035254:7907-7926 None:intergenic 20.0%
!! AAACTTACAGTATTCAAAAT+GGG - tig0035254:8033-8052 None:intergenic 20.0%
!! AAACTTAAATCTTCATATAG+GGG - tig0035254:8341-8360 None:intergenic 20.0%
!! AAAAATTCTCAAATAGTTCA+GGG - tig0035254:8386-8405 None:intergenic 20.0%
!! TAAAAATTCTCAAATAGTTC+AGG - tig0035254:8387-8406 None:intergenic 20.0%
!! AATATAATGATGTGGATATT+AGG - tig0035254:8545-8564 None:intergenic 20.0%
!!! ATTTTGGTTTTTATTGACTA+TGG - tig0035254:8742-8761 None:intergenic 20.0%
!! TAGTCAATAAAAACCAAAAT+TGG + tig0035254:8742-8761 Msa1454520:intron 20.0%
!! TAAAAACCAAAATTGGAAAA+TGG + tig0035254:8749-8768 Msa1454520:intron 20.0%
!! AATGAGTATTCAATTAAAAG+GGG + tig0035254:8906-8925 Msa1454520:intron 20.0%
!!! ATGACATTTTAATGAAAAAC+TGG + tig0035254:9203-9222 Msa1454520:intron 20.0%
!!! TTTTCTCCATAATAAAACTT+AGG - tig0035254:9475-9494 None:intergenic 20.0%
!! GGAAAATATGTTAAAAACTT+CGG - tig0035254:10505-10524 None:intergenic 20.0%
!!! TACGACATTTTATTTCAATA+TGG + tig0035254:10774-10793 Msa1454520:three_prime_UTR 20.0%
!!! ACGACATTTTATTTCAATAT+GGG + tig0035254:10775-10794 Msa1454520:three_prime_UTR 20.0%
!!! TTTTATTTCAATATGGGAAT+AGG + tig0035254:10781-10800 Msa1454520:three_prime_UTR 20.0%
! TATGGTTACTCTCAAATTAT+AGG + tig0035254:2044-2063 Msa1454520:five_prime_UTR 25.0%
! GTTAAAAAAAATTGAGGGTT+AGG - tig0035254:2355-2374 None:intergenic 25.0%
! TACAACCCTTAATTCAAAAT+TGG - tig0035254:2558-2577 None:intergenic 25.0%
! TAATATTCAAACTAACGAAG+AGG + tig0035254:2798-2817 Msa1454520:CDS 25.0%
! CATAAACACACACAAAAAAA+AGG - tig0035254:2895-2914 None:intergenic 25.0%
!!! CTTTTTTTTGTGTGTGTTTA+TGG + tig0035254:2893-2912 Msa1454520:intron 25.0%
! AGCTGTTAACTATATTTAAC+AGG + tig0035254:3050-3069 Msa1454520:intron 25.0%
!!! AAACCATGCTTTGAAATAAT+AGG + tig0035254:3296-3315 Msa1454520:intron 25.0%
! TGATGAATAATATCTTTGGT+TGG + tig0035254:3577-3596 Msa1454520:intron 25.0%
! GATGAATAATATCTTTGGTT+GGG + tig0035254:3578-3597 Msa1454520:intron 25.0%
! ATGAATAATATCTTTGGTTG+GGG + tig0035254:3579-3598 Msa1454520:intron 25.0%
!!! ATTGATATTTTTAAGTGCAC+TGG + tig0035254:3697-3716 Msa1454520:intron 25.0%
!!! AGATTACAATGTTTTAGTGA+TGG + tig0035254:3976-3995 Msa1454520:CDS 25.0%
! TTAAATAGATCTTCAAGACT+AGG - tig0035254:4013-4032 None:intergenic 25.0%
! AAATTACTAAAAGAAAGGGT+GGG - tig0035254:4128-4147 None:intergenic 25.0%
! AAAATTACTAAAAGAAAGGG+TGG - tig0035254:4129-4148 None:intergenic 25.0%
! TGATCTGGCAAAAATAAATA+GGG - tig0035254:4161-4180 None:intergenic 25.0%
! TTGATCTGGCAAAAATAAAT+AGG - tig0035254:4162-4181 None:intergenic 25.0%
!! AAACCGGATAATTTTCTAAT+GGG + tig0035254:4228-4247 Msa1454520:CDS 25.0%
! AATCCCATTAGAAAATTATC+CGG - tig0035254:4234-4253 None:intergenic 25.0%
!! GATAATTTTCTAATGGGATT+AGG + tig0035254:4234-4253 Msa1454520:CDS 25.0%
! ATTAAATGAGATGCTTATGT+TGG + tig0035254:4465-4484 Msa1454520:intron 25.0%
!!! TAAAAGTATCATAGCCTATT+AGG + tig0035254:4519-4538 Msa1454520:intron 25.0%
!! TACGTTTTTATGTTTCTTTC+TGG + tig0035254:4701-4720 Msa1454520:intron 25.0%
!! AGAAACAAGTTGAAACTATT+AGG + tig0035254:4872-4891 Msa1454520:intron 25.0%
! TGAAACTATTAGGAAAGATT+TGG + tig0035254:4882-4901 Msa1454520:intron 25.0%
! TGGTTTATGATAGAACATTA+TGG + tig0035254:4929-4948 Msa1454520:intron 25.0%
! AATAACGAAAGAAAAACTGA+AGG + tig0035254:5178-5197 Msa1454520:intron 25.0%
! ATAACAAATATAGATGGTGT+CGG - tig0035254:5830-5849 None:intergenic 25.0%
! TGTCTTACAAATTCAAACAA+TGG - tig0035254:5876-5895 None:intergenic 25.0%
!!! GTTATAGTTTTTTGTGTTCT+TGG - tig0035254:6122-6141 None:intergenic 25.0%
!! TTTTTGCTTATAAATTGGGA+CGG + tig0035254:6187-6206 Msa1454520:intron 25.0%
! AATCTAGAAACAAGAAACTA+AGG - tig0035254:6294-6313 None:intergenic 25.0%
!! CTGAAATATTGATGATATTG+CGG - tig0035254:6344-6363 None:intergenic 25.0%
!! TTTCAGCAATTCATTTTGAA+AGG + tig0035254:6358-6377 Msa1454520:intron 25.0%
!!! TTCAGCAATTCATTTTGAAA+GGG + tig0035254:6359-6378 Msa1454520:intron 25.0%
! AGGGAAAATAAAAATTTGAC+CGG + tig0035254:6456-6475 Msa1454520:intron 25.0%
! TCAAAATACAAGTTCAATGA+AGG - tig0035254:6542-6561 None:intergenic 25.0%
!!! CATTGAACTTGTATTTTGAA+TGG + tig0035254:6543-6562 Msa1454520:intron 25.0%
! TGAGAAAATCAGTGAAAAAA+AGG + tig0035254:6805-6824 Msa1454520:CDS 25.0%
!! ATAAATGATCACCTTTGTTT+AGG + tig0035254:7359-7378 Msa1454520:intron 25.0%
!!! CAGTGAATTTAATTTTGAAG+TGG + tig0035254:7575-7594 Msa1454520:intron 25.0%
!! TCATACACTTCCTAATTTTA+GGG - tig0035254:7753-7772 None:intergenic 25.0%
!! ATCATACACTTCCTAATTTT+AGG - tig0035254:7754-7773 None:intergenic 25.0%
! ACATTAAATATATCCAGCTA+AGG - tig0035254:7934-7953 None:intergenic 25.0%
! GAAACTTACAGTATTCAAAA+TGG - tig0035254:8034-8053 None:intergenic 25.0%
!!! TGTTTGAGAGTATTATAAAG+AGG + tig0035254:8250-8269 Msa1454520:intron 25.0%
! AACTTAAATCTTCATATAGG+GGG - tig0035254:8340-8359 None:intergenic 25.0%
!!! TTTTGGTTTGATTAATCTTC+AGG + tig0035254:8359-8378 Msa1454520:intron 25.0%
! AACTGAAAAAATGTGTAATC+AGG + tig0035254:8416-8435 Msa1454520:intron 25.0%
!! ATTTCTCCATTTTCCAATTT+TGG - tig0035254:8758-8777 None:intergenic 25.0%
! AATCTTTATGTGACATGAAA+AGG + tig0035254:8802-8821 Msa1454520:intron 25.0%
! TGATAATATAGGGGAAAAAT+AGG + tig0035254:8933-8952 Msa1454520:intron 25.0%
! TCTCAATTTGAATTGGAAAA+TGG + tig0035254:9167-9186 Msa1454520:intron 25.0%
! CTCAATTTGAATTGGAAAAT+GGG + tig0035254:9168-9187 Msa1454520:intron 25.0%
!! AATATGATGATGTGGATATT+AGG + tig0035254:9258-9277 Msa1454520:intron 25.0%
! TGAAAGATGATGTGTAAAAT+TGG + tig0035254:9281-9300 Msa1454520:intron 25.0%
! ACTTAGGTTTAATAATCTAC+AGG - tig0035254:9459-9478 None:intergenic 25.0%
! AATACAAAATTCTCCTCATT+TGG + tig0035254:9695-9714 Msa1454520:intron 25.0%
! ATACAAAATTCTCCTCATTT+GGG + tig0035254:9696-9715 Msa1454520:intron 25.0%
! TTTAGAGGGTTAGAAATATA+GGG - tig0035254:9782-9801 None:intergenic 25.0%
! ATGAGTTAATAATACAAACC+TGG - tig0035254:10410-10429 None:intergenic 25.0%
! CTGTAAAGTTCAGATTTAAT+TGG + tig0035254:10457-10476 Msa1454520:three_prime_UTR 25.0%
!!! TTTGATAATTTTGACCTTTG+TGG - tig0035254:10573-10592 None:intergenic 25.0%
! CAACAAGAGTAAAATTTCAA+TGG - tig0035254:10605-10624 None:intergenic 25.0%
!! CATTGAAATTTTACTCTTGT+TGG + tig0035254:10603-10622 Msa1454520:three_prime_UTR 25.0%
! TTATTCTGGTATTAGAAACT+TGG + tig0035254:10666-10685 Msa1454520:three_prime_UTR 25.0%
AAACTACAATCTTCATGACT+AGG - tig0035254:2080-2099 None:intergenic 30.0%
!!! TAGATTTTGGATAATGGAGA+TGG - tig0035254:2290-2309 None:intergenic 30.0%
!! GAAAGCGTAAGAATAGATTT+TGG - tig0035254:2303-2322 None:intergenic 30.0%
! GTAACGGAAGAATATGAAAA+AGG - tig0035254:2466-2485 None:intergenic 30.0%
! TTATTGAAAGAAGAGCGTAA+CGG - tig0035254:2482-2501 None:intergenic 30.0%
! ACTGCTTTGAATTATATGCA+AGG + tig0035254:2941-2960 Msa1454520:intron 30.0%
! CTGCTTTGAATTATATGCAA+GGG + tig0035254:2942-2961 Msa1454520:intron 30.0%
! TCAAAGCATGGTTTCTAAAA+TGG - tig0035254:3290-3309 None:intergenic 30.0%
TAGCCTATTATTTCAAAGCA+TGG - tig0035254:3302-3321 None:intergenic 30.0%
AATGTTACCCATAAGTTGTA+TGG + tig0035254:3370-3389 Msa1454520:intron 30.0%
ACATGATCCATACAACTTAT+GGG - tig0035254:3380-3399 None:intergenic 30.0%
TCATCACAATCATGAATTGA+GGG - tig0035254:3563-3582 None:intergenic 30.0%
TTCATCACAATCATGAATTG+AGG - tig0035254:3564-3583 None:intergenic 30.0%
TGAATAATATCTTTGGTTGG+GGG + tig0035254:3580-3599 Msa1454520:intron 30.0%
TGACTTAACATTATGAGGAT+TGG + tig0035254:3638-3657 Msa1454520:intron 30.0%
!!! TTATGAGGATTGGTTTTTTG+TGG + tig0035254:3648-3667 Msa1454520:intron 30.0%
!! ATTTTCCTTATGAAAAGCAC+AGG - tig0035254:3751-3770 None:intergenic 30.0%
AAAGGCTAAGACAATGAATA+TGG - tig0035254:3851-3870 None:intergenic 30.0%
! TGAAGAAAGCACAAAAGAAA+AGG - tig0035254:3869-3888 None:intergenic 30.0%
! TTTCTTTTGTGCTTTCTTCA+AGG + tig0035254:3869-3888 Msa1454520:intron 30.0%
ATTCCAAATGTTAGATGGTT+TGG + tig0035254:3944-3963 Msa1454520:CDS 30.0%
AATTACTAAAAGAAAGGGTG+GGG - tig0035254:4127-4146 None:intergenic 30.0%
GATCTGGCAAAAATAAATAG+GGG - tig0035254:4160-4179 None:intergenic 30.0%
! CAAACCGGATAATTTTCTAA+TGG + tig0035254:4227-4246 Msa1454520:CDS 30.0%
! ATTTTCTAATGGGATTAGGA+AGG + tig0035254:4238-4257 Msa1454520:CDS 30.0%
! TTTTAACAAGATTGACTACC+TGG - tig0035254:4272-4291 None:intergenic 30.0%
AGGTAGTCAATCTTGTTAAA+AGG + tig0035254:4271-4290 Msa1454520:intron 30.0%
!!! CAGGTTTATGCTATTGATTT+TGG + tig0035254:4368-4387 Msa1454520:intron 30.0%
!!! TTATGCTATTGATTTTGGTC+TGG + tig0035254:4373-4392 Msa1454520:CDS 30.0%
ACTAAATCTTTGTACCTGTA+AGG - tig0035254:4437-4456 None:intergenic 30.0%
TACAGGTACAAAGATTTAGT+TGG + tig0035254:4437-4456 Msa1454520:intron 30.0%
! GATACTTTTACTATGCTATC+AGG - tig0035254:4509-4528 None:intergenic 30.0%
AGATTTGGAGATTAATGAGT+TGG + tig0035254:4897-4916 Msa1454520:intron 30.0%
! TAATGAGTTGGACCAAAATA+TGG + tig0035254:4909-4928 Msa1454520:intron 30.0%
ATTATTAACCAAACACTGCA+AGG - tig0035254:5079-5098 None:intergenic 30.0%
!! ATTTAGAGTGTACTGTTTTG+AGG - tig0035254:5268-5287 None:intergenic 30.0%
TATTATTTATAGGTCCGCTT+TGG - tig0035254:5497-5516 None:intergenic 30.0%
TTACTCACAATTTACGAGTT+AGG - tig0035254:5585-5604 None:intergenic 30.0%
TAACTCGTAAATTGTGAGTA+AGG + tig0035254:5584-5603 Msa1454520:intron 30.0%
!! ATTCCACAGAGTATTCTTTT+GGG - tig0035254:5637-5656 None:intergenic 30.0%
!! AATTCCACAGAGTATTCTTT+TGG - tig0035254:5638-5657 None:intergenic 30.0%
TGCATTGAATTTCTACTATC+AGG - tig0035254:5691-5710 None:intergenic 30.0%
GATAGTAGAAATTCAATGCA+TGG + tig0035254:5691-5710 Msa1454520:intron 30.0%
!! CAAGTTTTCTTTTAACTGGA+AGG - tig0035254:5770-5789 None:intergenic 30.0%
TAACAAATATAGATGGTGTC+GGG - tig0035254:5829-5848 None:intergenic 30.0%
! ATCAACTTCTCATTTTACAC+CGG + tig0035254:5848-5867 Msa1454520:intron 30.0%
ACAAATTCAAACAATGGTAC+CGG - tig0035254:5870-5889 None:intergenic 30.0%
! TTTTTGCTTATAATTCGGGA+CGG - tig0035254:5907-5926 None:intergenic 30.0%
TAGTTTATTAAGCTGATGGT+TGG + tig0035254:6216-6235 Msa1454520:intron 30.0%
AGTTTATTAAGCTGATGGTT+GGG + tig0035254:6217-6236 Msa1454520:intron 30.0%
AAACAAGAAACTAAGGTGAA+AGG - tig0035254:6287-6306 None:intergenic 30.0%
!! TCTTGTTTCTAGATTCTACT+AGG + tig0035254:6299-6318 Msa1454520:intron 30.0%
!! CTTGTTTCTAGATTCTACTA+GGG + tig0035254:6300-6319 Msa1454520:intron 30.0%
ACTTACAAATAGTAACAGCA+AGG - tig0035254:6389-6408 None:intergenic 30.0%
! TTCTAATTCTCTGGTGATTT+TGG + tig0035254:6590-6609 Msa1454520:intron 30.0%
! TTTCTCATACTTCTGTTTCT+TGG - tig0035254:6792-6811 None:intergenic 30.0%
! ATGGAAGTATGATGCAAATT+CGG - tig0035254:6960-6979 None:intergenic 30.0%
!!! CTTTTGAGATAAGCATAATC+TGG - tig0035254:7013-7032 None:intergenic 30.0%
CAGATTATGCTTATCTCAAA+AGG + tig0035254:7011-7030 Msa1454520:CDS 30.0%
ATTAATAAGCGTGAGAAATG+AGG - tig0035254:7102-7121 None:intergenic 30.0%
AGTCAAACACATAATCAAAC+TGG - tig0035254:7216-7235 None:intergenic 30.0%
AGTTTGATTATGTGTTTGAC+TGG + tig0035254:7215-7234 Msa1454520:CDS 30.0%
!!! AATTTTGAAGTGGAACCTAA+AGG + tig0035254:7585-7604 Msa1454520:intron 30.0%
!!! ATTTTGAAGTGGAACCTAAA+GGG + tig0035254:7586-7605 Msa1454520:intron 30.0%
!!! TGGTTTTGGTAGAATGAAAA+AGG - tig0035254:7786-7805 None:intergenic 30.0%
ATAGAAAGTTATAAAGCCAG+TGG - tig0035254:7806-7825 None:intergenic 30.0%
ATTGCAAAACCTACTTCAAT+GGG - tig0035254:7860-7879 None:intergenic 30.0%
TTTAATGTTCTGTCTCTTAC+AGG + tig0035254:7946-7965 Msa1454520:intron 30.0%
CAAATAAAGCCAAAAAGGTT+CGG - tig0035254:8109-8128 None:intergenic 30.0%
!!! GAACCTTTTTGGCTTTATTT+GGG + tig0035254:8108-8127 Msa1454520:intron 30.0%
!!! AGGGATTTCTCATCTTTTTT+GGG + tig0035254:8173-8192 Msa1454520:intron 30.0%
TTGGGAGAAAATTGTTAAAG+AGG + tig0035254:8191-8210 Msa1454520:intron 30.0%
GAGAAAATTGTTAAAGAGGA+GGG + tig0035254:8195-8214 Msa1454520:intron 30.0%
TTACTCAATAATTTGATCCG+GGG - tig0035254:8316-8335 None:intergenic 30.0%
GTTACTCAATAATTTGATCC+GGG - tig0035254:8317-8336 None:intergenic 30.0%
GGTTACTCAATAATTTGATC+CGG - tig0035254:8318-8337 None:intergenic 30.0%
ACTTAAATCTTCATATAGGG+GGG - tig0035254:8339-8358 None:intergenic 30.0%
AGATGATGTGTAAAATTGGT+TGG - tig0035254:9285-9304 None:intergenic 30.0%
TGGAAGATGATGTGTAAAAT+TGG - tig0035254:8522-8541 None:intergenic 30.0%
ATAATGATGTGGATATTAGG+TGG - tig0035254:8542-8561 None:intergenic 30.0%
AGCATGATAAAGTGTAACAA+TGG + tig0035254:8673-8692 Msa1454520:intron 30.0%
!! AAGCATGTTTTTGAACAATG+AGG + tig0035254:8871-8890 Msa1454520:intron 30.0%
!! AGCATGTTTTTGAACAATGA+GGG + tig0035254:8872-8891 Msa1454520:intron 30.0%
AGTATTCAATTAAAAGGGGT+AGG + tig0035254:8910-8929 Msa1454520:intron 30.0%
! GGAAAAATAGGATCTTTTTG+TGG + tig0035254:8945-8964 Msa1454520:intron 30.0%
TATCTCTCAATTACTTGTGA+TGG + tig0035254:9066-9085 Msa1454520:intron 30.0%
TTTGAATTGGAAAATGGGAA+TGG + tig0035254:9173-9192 Msa1454520:intron 30.0%
TTGAATTGGAAAATGGGAAT+GGG + tig0035254:9174-9193 Msa1454520:intron 30.0%
!! GTTAAACTTTTGATAGTCTC+CGG - tig0035254:9341-9360 None:intergenic 30.0%
GGAGACTATCAAAAGTTTAA+CGG + tig0035254:9340-9359 Msa1454520:intron 30.0%
AAGAAATAGATGACATTGTG+AGG + tig0035254:9642-9661 Msa1454520:intron 30.0%
AGAAATAGATGACATTGTGA+GGG + tig0035254:9643-9662 Msa1454520:intron 30.0%
TACAAAATTCTCCTCATTTG+GGG + tig0035254:9697-9716 Msa1454520:intron 30.0%
GAACTCAAAAATTGTATTGG+AGG + tig0035254:9720-9739 Msa1454520:intron 30.0%
TCAAAAATTGTATTGGAGGA+GGG + tig0035254:9724-9743 Msa1454520:intron 30.0%
GTTAGAAATATAGGGGAAAA+TGG - tig0035254:9774-9793 None:intergenic 30.0%
TTAGAGGGTTAGAAATATAG+GGG - tig0035254:9781-9800 None:intergenic 30.0%
! CTTTAGAGGGTTAGAAATAT+AGG - tig0035254:9783-9802 None:intergenic 30.0%
! TAAGACTTTGTTTGAGAGTT+TGG - tig0035254:9825-9844 None:intergenic 30.0%
GGCAATTATTGCATTTACAA+AGG - tig0035254:9960-9979 None:intergenic 30.0%
TTATCAAGTTCCAATGTCTT+GGG + tig0035254:9998-10017 Msa1454520:CDS 30.0%
!! ATAAGCAACTTTTGCTTTTG+CGG - tig0035254:10341-10360 None:intergenic 30.0%
ATTAACTCATCCACTCAAAA+TGG + tig0035254:10420-10439 Msa1454520:three_prime_UTR 30.0%
TTAACTCATCCACTCAAAAT+GGG + tig0035254:10421-10440 Msa1454520:three_prime_UTR 30.0%
TTTCCTGTATGTTACTGTAT+TGG + tig0035254:10520-10539 Msa1454520:three_prime_UTR 30.0%
AAACCAATACAGTAACATAC+AGG - tig0035254:10526-10545 None:intergenic 30.0%
AGATTACTATGGAAGATAAC+TGG - tig0035254:10752-10771 None:intergenic 30.0%
AATGTCGTACAAGATTACTA+TGG - tig0035254:10763-10782 None:intergenic 30.0%
!! TCTTTTGGTGTAGTGTATCT+GGG - tig0035254:2107-2126 None:intergenic 35.0%
!! TTCTTTTGGTGTAGTGTATC+TGG - tig0035254:2108-2127 None:intergenic 35.0%
AAATTGATAGAGCGAGATCT+AGG - tig0035254:2427-2446 None:intergenic 35.0%
GGTTGTAGTTGTTGTGATTA+GGG + tig0035254:2571-2590 Msa1454520:five_prime_UTR 35.0%
! AGCAATTTCAGCATTTTTGC+CGG - tig0035254:3097-3116 None:intergenic 35.0%
GCAAAAATGCTGAAATTGCT+AGG + tig0035254:3097-3116 Msa1454520:intron 35.0%
AAATGCTGAAATTGCTAGGT+CGG + tig0035254:3101-3120 Msa1454520:intron 35.0%
CAATAAAAACTCCACACAAG+TGG - tig0035254:3141-3160 None:intergenic 35.0%
! CACTTGTGTGGAGTTTTTAT+TGG + tig0035254:3139-3158 Msa1454520:intron 35.0%
!!! ACTTTTTTTTTGGGGGTAGA+TGG - tig0035254:3180-3199 None:intergenic 35.0%
!!! TGCTCAAGTGCTTTTTTAAG+AGG + tig0035254:3242-3261 Msa1454520:intron 35.0%
ATAATAGGCTAGTGTGTTAG+AGG + tig0035254:3311-3330 Msa1454520:intron 35.0%
TAATAGGCTAGTGTGTTAGA+GGG + tig0035254:3312-3331 Msa1454520:intron 35.0%
ATGCACTTATAACTGTGCAA+AGG + tig0035254:3343-3362 Msa1454520:intron 35.0%
CACATGATCCATACAACTTA+TGG - tig0035254:3381-3400 None:intergenic 35.0%
TTTGCTCAAAAGATTAGCGT+CGG + tig0035254:3463-3482 Msa1454520:intron 35.0%
ATCACAATCATGAATTGAGG+GGG - tig0035254:3561-3580 None:intergenic 35.0%
CATCACAATCATGAATTGAG+GGG - tig0035254:3562-3581 None:intergenic 35.0%
TTAATGGGAATTGGGTGAAA+TGG + tig0035254:3605-3624 Msa1454520:intron 35.0%
! TTCTTCCTGTGCTTTTCATA+AGG + tig0035254:3743-3762 Msa1454520:intron 35.0%
AAGTTGTACAGAATTCTCCA+GGG + tig0035254:3807-3826 Msa1454520:CDS 35.0%
GAACTGACGATAAATCCTTA+TGG - tig0035254:3896-3915 None:intergenic 35.0%
!! TCAAGTTTGATTTTGACAGC+TGG + tig0035254:3920-3939 Msa1454520:intron 35.0%
CTGGAATTCCAAATGTTAGA+TGG + tig0035254:3939-3958 Msa1454520:CDS 35.0%
ACTCCAAACCATCTAACATT+TGG - tig0035254:3950-3969 None:intergenic 35.0%
! TCTTATGCTTGCTGATCAAA+TGG + tig0035254:4066-4085 Msa1454520:CDS 35.0%
! ATAGTTTGCAAAGTCAATCC+GGG - tig0035254:4096-4115 None:intergenic 35.0%
! GATAGTTTGCAAAGTCAATC+CGG - tig0035254:4097-4116 None:intergenic 35.0%
TCGAATGAATGAACTCAACA+CGG - tig0035254:4185-4204 None:intergenic 35.0%
TCTACATCGAGATATCAAAC+CGG + tig0035254:4212-4231 Msa1454520:CDS 35.0%
GGATAAACGTGAATCCTAAT+AGG - tig0035254:4536-4555 None:intergenic 35.0%
TAGGATTCACGTTTATCCAA+TGG + tig0035254:4538-4557 Msa1454520:intron 35.0%
TTGTAACTTACAACTGCCAT+TGG - tig0035254:4557-4576 None:intergenic 35.0%
TATCACACTGTTGTCATATG+TGG + tig0035254:4596-4615 Msa1454520:intron 35.0%
ATCACACTGTTGTCATATGT+GGG + tig0035254:4597-4616 Msa1454520:intron 35.0%
ATGTGGGAAAAATAACGACT+AGG + tig0035254:4613-4632 Msa1454520:intron 35.0%
TGTGGGAAAAATAACGACTA+GGG + tig0035254:4614-4633 Msa1454520:intron 35.0%
CTTTGTCATACTAGAGTGAA+TGG - tig0035254:4727-4746 None:intergenic 35.0%
ATCATTGATAGACTGGCATT+CGG - tig0035254:4752-4771 None:intergenic 35.0%
TCTATATAGAATACAGCGTG+TGG - tig0035254:4776-4795 None:intergenic 35.0%
GCTATATTGGGAATTTGACA+AGG + tig0035254:4817-4836 Msa1454520:intron 35.0%
AATTACTGTGCACAGTCATA+CGG - tig0035254:5126-5145 None:intergenic 35.0%
GAAAGAAAAACTGAAGGATG+TGG + tig0035254:5184-5203 Msa1454520:intron 35.0%
! ATGATTTCATATTTTCCCCG+AGG + tig0035254:5306-5325 Msa1454520:intron 35.0%
! TGATTTCATATTTTCCCCGA+GGG + tig0035254:5307-5326 Msa1454520:intron 35.0%
TATTGACAACAGAGATGTCA+GGG - tig0035254:5348-5367 None:intergenic 35.0%
AATTTACGAGTTAGGAATCC+TGG - tig0035254:5577-5596 None:intergenic 35.0%
! TAACTGGAAGGATTTTCTAG+CGG - tig0035254:5758-5777 None:intergenic 35.0%
GGAGTAGTTTATTAAGCTGA+TGG + tig0035254:6212-6231 Msa1454520:intron 35.0%
GTTTATTAAGCTGATGGTTG+GGG + tig0035254:6218-6237 Msa1454520:intron 35.0%
TATTCAATCATCAACACTGC+AGG + tig0035254:6436-6455 Msa1454520:intron 35.0%
ATTCAATCATCAACACTGCA+GGG + tig0035254:6437-6456 Msa1454520:intron 35.0%
GAATACTGCTTCTAATTCTC+TGG + tig0035254:6581-6600 Msa1454520:intron 35.0%
! AGAGATGATTTAGAGTCTCT+TGG + tig0035254:6631-6650 Msa1454520:CDS 35.0%
! TTTTGATGTACTTCCTGAGA+GGG + tig0035254:6659-6678 Msa1454520:CDS 35.0%
ATTACTGTCGACCTTTACTT+TGG + tig0035254:6690-6709 Msa1454520:intron 35.0%
TCAGATAAAGTACATAGTGC+TGG - tig0035254:6722-6741 None:intergenic 35.0%
! GTTCTTTTTGTAGTCTTCCT+TGG + tig0035254:6747-6766 Msa1454520:intron 35.0%
AGCAAATTCTTAGTGTAGGT+CGG - tig0035254:6904-6923 None:intergenic 35.0%
AAGGAGCAAATTCTTAGTGT+AGG - tig0035254:6908-6927 None:intergenic 35.0%
AAGTATGATGCAAATTCGGT+TGG - tig0035254:6956-6975 None:intergenic 35.0%
TGATTGCTGATACTTCAAGA+TGG - tig0035254:7242-7261 None:intergenic 35.0%
ATGACATGGTAATCACAACT+GGG - tig0035254:7321-7340 None:intergenic 35.0%
TTGCAGTTAACAAGTTGCTT+GGG + tig0035254:7636-7655 Msa1454520:intron 35.0%
!!! AATTTTAGGGCAAGGAGATA+GGG - tig0035254:7726-7745 None:intergenic 35.0%
!!! TAATTTTAGGGCAAGGAGAT+AGG - tig0035254:7727-7746 None:intergenic 35.0%
TTTCATTCTACCAAAACCAC+TGG + tig0035254:7787-7806 Msa1454520:intron 35.0%
! AGTTATAAAGCCAGTGGTTT+TGG - tig0035254:7800-7819 None:intergenic 35.0%
TTTCAACTACCCATTGAAGT+AGG + tig0035254:7848-7867 Msa1454520:intron 35.0%
CATTGCAAAACCTACTTCAA+TGG - tig0035254:7861-7880 None:intergenic 35.0%
TATCTACTTAACACCTTAGC+TGG + tig0035254:7918-7937 Msa1454520:intron 35.0%
TGCAATACCAGCGTAATATA+TGG - tig0035254:8077-8096 None:intergenic 35.0%
!!! CGAACCTTTTTGGCTTTATT+TGG + tig0035254:8107-8126 Msa1454520:intron 35.0%
ACTCCCAAATAAAGCCAAAA+AGG - tig0035254:8114-8133 None:intergenic 35.0%
!! TTTGGCTTTATTTGGGAGTT+AGG + tig0035254:8115-8134 Msa1454520:intron 35.0%
!!! GAGGGATTTCTCATCTTTTT+TGG + tig0035254:8172-8191 Msa1454520:intron 35.0%
GGAGAAAATTGTTAAAGAGG+AGG + tig0035254:8194-8213 Msa1454520:intron 35.0%
GTTACACTTTATCATGCTCT+GGG - tig0035254:8671-8690 None:intergenic 35.0%
TGTTACACTTTATCATGCTC+TGG - tig0035254:8672-8691 None:intergenic 35.0%
AAAGGGGTAGGTGATAATAT+AGG + tig0035254:8922-8941 Msa1454520:intron 35.0%
AAGGGGTAGGTGATAATATA+GGG + tig0035254:8923-8942 Msa1454520:intron 35.0%
!! AGAGCAGTGTTTCTGATTTT+TGG + tig0035254:9025-9044 Msa1454520:intron 35.0%
!! GAGCAGTGTTTCTGATTTTT+GGG + tig0035254:9026-9045 Msa1454520:intron 35.0%
!! AGCAGTGTTTCTGATTTTTG+GGG + tig0035254:9027-9046 Msa1454520:intron 35.0%
!!! TTTCTGATTTTTGGGGTTGA+AGG + tig0035254:9034-9053 Msa1454520:intron 35.0%
!! AGTGGTGTTGTTGACTATAA+TGG + tig0035254:9098-9117 Msa1454520:intron 35.0%
CGATCGTTCTCAATTTGAAT+TGG + tig0035254:9160-9179 Msa1454520:intron 35.0%
AAACTTGCAAACAAAGCCTA+AGG - tig0035254:9573-9592 None:intergenic 35.0%
!! TTAGGCTTTGTTTGCAAGTT+TGG + tig0035254:9572-9591 Msa1454520:intron 35.0%
ACAAAATTCTCCTCATTTGG+GGG + tig0035254:9698-9717 Msa1454520:intron 35.0%
GGGGAACTCAAAAATTGTAT+TGG + tig0035254:9717-9736 Msa1454520:intron 35.0%
CTCAAAAATTGTATTGGAGG+AGG + tig0035254:9723-9742 Msa1454520:intron 35.0%
! ACTTTGTTTGAGAGTTTGGA+GGG - tig0035254:9821-9840 None:intergenic 35.0%
AACAAAGATCTGAGTGGAAA+AGG - tig0035254:9869-9888 None:intergenic 35.0%
ATTCACAACAAAGATCTGAG+TGG - tig0035254:9875-9894 None:intergenic 35.0%
TAACTGCATGATCACATATG+AGG - tig0035254:9981-10000 None:intergenic 35.0%
GTTATCAAGTTCCAATGTCT+TGG + tig0035254:9997-10016 Msa1454520:intron 35.0%
!! TAACTATGAAAGTGCCCTTA+GGG + tig0035254:10228-10247 Msa1454520:CDS 35.0%
AGTTGAGCTGTGAGAAAATT+TGG + tig0035254:10368-10387 Msa1454520:three_prime_UTR 35.0%
! CAAACCTGGAAATTCAAGTT+CGG - tig0035254:10396-10415 None:intergenic 35.0%
TTTAATTGGCAGTTCACTTC+TGG + tig0035254:10471-10490 Msa1454520:three_prime_UTR 35.0%
!! TGTTAAAAACTTCGGTGTTC+CGG - tig0035254:10497-10516 None:intergenic 35.0%
ATAATTTCCAGACACTTGCA+TGG - tig0035254:10650-10669 None:intergenic 35.0%
CAAGTGTCTGGAAATTATTC+TGG + tig0035254:10652-10671 Msa1454520:three_prime_UTR 35.0%
! TTGGAATGTTTTACCTTGTG+TGG + tig0035254:10685-10704 Msa1454520:three_prime_UTR 35.0%
! CGAGTGGTGTTTACTTCTTT+TGG - tig0035254:2122-2141 None:intergenic 40.0%
TCATTCTTTCTTGCAACCGT+CGG - tig0035254:2203-2222 None:intergenic 40.0%
GGGTTGTAGTTGTTGTGATT+AGG + tig0035254:2570-2589 Msa1454520:five_prime_UTR 40.0%
ATTTGAATGGAACCTCGTGT+TGG + tig0035254:2622-2641 Msa1454520:exon 40.0%
TTTGAATGGAACCTCGTGTT+GGG + tig0035254:2623-2642 Msa1454520:exon 40.0%
TAAAAACTCCACACAAGTGG+AGG - tig0035254:3138-3157 None:intergenic 40.0%
!!! TTTTTTTTGGGGGTAGATGG+AGG - tig0035254:3177-3196 None:intergenic 40.0%
ATTCTCGCTTCCTATTTCCT+TGG + tig0035254:3215-3234 Msa1454520:intron 40.0%
TTGCTCAAAAGATTAGCGTC+GGG + tig0035254:3464-3483 Msa1454520:intron 40.0%
!! TCTTTGGTTGGGGGTTTTAA+TGG + tig0035254:3589-3608 Msa1454520:intron 40.0%
!! CTTTGGTTGGGGGTTTTAAT+GGG + tig0035254:3590-3609 Msa1454520:intron 40.0%
!! TTGGGGGTTTTAATGGGAAT+TGG + tig0035254:3596-3615 Msa1454520:intron 40.0%
!! TGGGGGTTTTAATGGGAATT+GGG + tig0035254:3597-3616 Msa1454520:intron 40.0%
CTGGAGAATTCTGTACAACT+TGG - tig0035254:3808-3827 None:intergenic 40.0%
CAAGTTGTACAGAATTCTCC+AGG + tig0035254:3806-3825 Msa1454520:CDS 40.0%
AATAGTCATTACTTCCTCCC+TGG - tig0035254:3827-3846 None:intergenic 40.0%
TGCTTTCTTCAAGGACCATA+AGG + tig0035254:3878-3897 Msa1454520:intron 40.0%
! TGTTAGATGGTTTGGAGTAG+AGG + tig0035254:3952-3971 Msa1454520:CDS 40.0%
! GTTAGATGGTTTGGAGTAGA+GGG + tig0035254:3953-3972 Msa1454520:CDS 40.0%
!!! GTTTTAGTGATGGATCTGCT+TGG + tig0035254:3986-4005 Msa1454520:CDS 40.0%
! ATGCTTGCTGATCAAATGGT+AGG + tig0035254:4070-4089 Msa1454520:intron 40.0%
! CCTGTAAGGAATGTGTTGAT+GGG - tig0035254:4423-4442 None:intergenic 40.0%
ACCTGTAAGGAATGTGTTGA+TGG - tig0035254:4424-4443 None:intergenic 40.0%
GTGTGGAATCATTGATAGAC+TGG - tig0035254:4759-4778 None:intergenic 40.0%
ATTGGGAATTTGACAAGGAC+TGG + tig0035254:4822-4841 Msa1454520:intron 40.0%
TTGGGAATTTGACAAGGACT+GGG + tig0035254:4823-4842 Msa1454520:intron 40.0%
! AACAACCAAGCCTTATACGT+GGG - tig0035254:4979-4998 None:intergenic 40.0%
AGAAAAACTGAAGGATGTGG+TGG + tig0035254:5187-5206 Msa1454520:intron 40.0%
GAAAAACTGAAGGATGTGGT+GGG + tig0035254:5188-5207 Msa1454520:intron 40.0%
!!! AGAGTGTACTGTTTTGAGGT+GGG - tig0035254:5264-5283 None:intergenic 40.0%
!!! TAGAGTGTACTGTTTTGAGG+TGG - tig0035254:5265-5284 None:intergenic 40.0%
CTATTGACAACAGAGATGTC+AGG - tig0035254:5349-5368 None:intergenic 40.0%
CTCGTAAATTGTGAGTAAGG+AGG + tig0035254:5587-5606 Msa1454520:intron 40.0%
TTGCCCAAAAGAATACTCTG+TGG + tig0035254:5631-5650 Msa1454520:intron 40.0%
!! AACTGGAAGGATTTTCTAGC+GGG - tig0035254:5757-5776 None:intergenic 40.0%
TTGCTTATAAATTGGGACGG+AGG + tig0035254:6190-6209 Msa1454520:intron 40.0%
TGCTTATAAATTGGGACGGA+GGG + tig0035254:6191-6210 Msa1454520:intron 40.0%
TATAACACTTCCTACCACCA+AGG - tig0035254:6244-6263 None:intergenic 40.0%
TTCTAGATTCTACTAGGGTC+AGG + tig0035254:6305-6324 Msa1454520:intron 40.0%
ATGAATACTCACCTTGGCAT+TGG + tig0035254:6498-6517 Msa1454520:CDS 40.0%
ACTAACACATACCAATGCCA+AGG - tig0035254:6512-6531 None:intergenic 40.0%
!! GTTTTGATGTACTTCCTGAG+AGG + tig0035254:6658-6677 Msa1454520:CDS 40.0%
GTAATAATTACCTCCCTCTC+AGG - tig0035254:6675-6694 None:intergenic 40.0%
! TTTTTGTAGTCTTCCTTGGC+AGG + tig0035254:6751-6770 Msa1454520:intron 40.0%
! TTTTGTAGTCTTCCTTGGCA+GGG + tig0035254:6752-6771 Msa1454520:intron 40.0%
GCAAATTCTTAGTGTAGGTC+GGG - tig0035254:6903-6922 None:intergenic 40.0%
! AAGAATTTGCTCCTTACTCC+AGG + tig0035254:6913-6932 Msa1454520:intron 40.0%
TCCATTACTGTCGCTCATTA+AGG + tig0035254:6975-6994 Msa1454520:CDS 40.0%
ACCTTAATGAGCGACAGTAA+TGG - tig0035254:6979-6998 None:intergenic 40.0%
TCAAACCTTCACGGATAAAC+AGG - tig0035254:7048-7067 None:intergenic 40.0%
TGACATGGTAATCACAACTG+GGG - tig0035254:7320-7339 None:intergenic 40.0%
GATGACATGGTAATCACAAC+TGG - tig0035254:7322-7341 None:intergenic 40.0%
GATTACCATGTCATCTGCAA+TGG + tig0035254:7327-7346 Msa1454520:intron 40.0%
TTCATCCATTGCAGATGACA+TGG - tig0035254:7335-7354 None:intergenic 40.0%
! ATCACCTTTGTTTAGGTTCC+TGG + tig0035254:7366-7385 Msa1454520:intron 40.0%
AGATCTCCCATAAGTGTAAC+AGG + tig0035254:7453-7472 Msa1454520:intron 40.0%
TGAAGGCCTGTTACACTTAT+GGG - tig0035254:7462-7481 None:intergenic 40.0%
TTGAAGGCCTGTTACACTTA+TGG - tig0035254:7463-7482 None:intergenic 40.0%
TTGGTCAAACGTAGTTAGGA+AGG + tig0035254:7610-7629 Msa1454520:intron 40.0%
CTTGCAGTTAACAAGTTGCT+TGG + tig0035254:7635-7654 Msa1454520:intron 40.0%
TGCAGTTAACAAGTTGCTTG+GGG + tig0035254:7637-7656 Msa1454520:intron 40.0%
!!! AGGGTCTTAATTTTAGGGCA+AGG - tig0035254:7734-7753 None:intergenic 40.0%
TCAGTCACCATATATTACGC+TGG + tig0035254:8067-8086 Msa1454520:intron 40.0%
! GATGTTTTGCCGAACCTTTT+TGG + tig0035254:8097-8116 Msa1454520:intron 40.0%
ATTTGGGAGTTAGGAGGAAA+AGG + tig0035254:8124-8143 Msa1454520:intron 40.0%
TTTGGGAGTTAGGAGGAAAA+GGG + tig0035254:8125-8144 Msa1454520:intron 40.0%
TCAATAATTTGATCCGGGGA+GGG - tig0035254:8312-8331 None:intergenic 40.0%
!! CAGTGTTGAGTGTTGACTAA+CGG - tig0035254:8478-8497 None:intergenic 40.0%
! TGCTTTTCTGATTTCAGCCT+CGG + tig0035254:8633-8652 Msa1454520:intron 40.0%
AGGGGTAGGTGATAATATAG+GGG + tig0035254:8924-8943 Msa1454520:intron 40.0%
TCAGTACACAGACACATCAA+TGG - tig0035254:8973-8992 None:intergenic 40.0%
TGACCCACACTATTGTGTTT+GGG + tig0035254:8990-9009 Msa1454520:intron 40.0%
! CTTTGTTTGCAAGTTTGGAG+AGG + tig0035254:9577-9596 Msa1454520:intron 40.0%
TTTGCAAGTTTGGAGAGGAA+GGG + tig0035254:9582-9601 Msa1454520:intron 40.0%
AGGGGTTTGGAAAAAAAGGA+AGG + tig0035254:9610-9629 Msa1454520:intron 40.0%
GAAAAAAAGGAAGGAGCAAG+TGG + tig0035254:9619-9638 Msa1454520:intron 40.0%
TAGATGACATTGTGAGGGAA+AGG + tig0035254:9648-9667 Msa1454520:intron 40.0%
!!! TTTTTGAGTTCCCCCAAATG+AGG - tig0035254:9711-9730 None:intergenic 40.0%
! CTTTGTTTGAGAGTTTGGAG+GGG - tig0035254:9820-9839 None:intergenic 40.0%
! GACTTTGTTTGAGAGTTTGG+AGG - tig0035254:9822-9841 None:intergenic 40.0%
ACTTGATTGACCCAAGACAT+TGG - tig0035254:10011-10030 None:intergenic 40.0%
AATGTCTTGGGTCAATCAAG+TGG + tig0035254:10010-10029 Msa1454520:CDS 40.0%
GTCAATCAAGTGGATCATCT+AGG + tig0035254:10020-10039 Msa1454520:CDS 40.0%
AGTAGTCGTGATGCATTTGT+TGG + tig0035254:10058-10077 Msa1454520:CDS 40.0%
! GCAGCACATAGAATTTTGAG+CGG + tig0035254:10130-10149 Msa1454520:CDS 40.0%
GGTCAAAGAAGTTCACCAAT+CGG + tig0035254:10151-10170 Msa1454520:CDS 40.0%
!! AAGGGCACTTTCATAGTTAG+TGG - tig0035254:10227-10246 None:intergenic 40.0%
!! CTAACTATGAAAGTGCCCTT+AGG + tig0035254:10227-10246 Msa1454520:CDS 40.0%
!! AACTATGAAAGTGCCCTTAG+GGG + tig0035254:10229-10248 Msa1454520:CDS 40.0%
ACCTGATGTTTACACTTCAC+AGG + tig0035254:10546-10565 Msa1454520:three_prime_UTR 40.0%
TCCTGTGAAGTGTAAACATC+AGG - tig0035254:10550-10569 None:intergenic 40.0%
! ACTTGCATGGTGGAAACTAA+AGG - tig0035254:10637-10656 None:intergenic 40.0%
TTGGTGTAGTGTATCTGGGT+GGG - tig0035254:2103-2122 None:intergenic 45.0%
! TTTGGTGTAGTGTATCTGGG+TGG - tig0035254:2104-2123 None:intergenic 45.0%
AGAGTTTGGAAGTCCGACAA+AGG + tig0035254:2160-2179 Msa1454520:five_prime_UTR 45.0%
! GCGAGATCTAGGATAGGATA+AGG - tig0035254:2416-2435 None:intergenic 45.0%
! GATAGAGCGAGATCTAGGAT+AGG - tig0035254:2422-2441 None:intergenic 45.0%
CGAAACTTATTCCCAACACG+AGG - tig0035254:2637-2656 None:intergenic 45.0%
GTTGGGAATAAGTTTCGCCT+TGG + tig0035254:2640-2659 Msa1454520:CDS 45.0%
GGAATAAGTTTCGCCTTGGT+AGG + tig0035254:2644-2663 Msa1454520:CDS 45.0%
TTTCGCCTTGGTAGGAAGAT+CGG + tig0035254:2652-2671 Msa1454520:CDS 45.0%
! AAGATCGGTAGTGGTTCCTT+TGG + tig0035254:2667-2686 Msa1454520:CDS 45.0%
! AGATCGGTAGTGGTTCCTTT+GGG + tig0035254:2668-2687 Msa1454520:CDS 45.0%
! TCCTTTGGGGAGATCTACTT+AGG + tig0035254:2682-2701 Msa1454520:CDS 45.0%
ACCTAAGTAGATCTCCCCAA+AGG - tig0035254:2686-2705 None:intergenic 45.0%
!! TCCACAAGTTCTAGCTCAAC+CGG + tig0035254:3075-3094 Msa1454520:intron 45.0%
TCGCTTCCTATTTCCTTGGA+GGG + tig0035254:3219-3238 Msa1454520:intron 45.0%
AATCCATTCCACTCACTCCT+CGG + tig0035254:3521-3540 Msa1454520:intron 45.0%
! GTATTTTTCCGAGGAGTGAG+TGG - tig0035254:3532-3551 None:intergenic 45.0%
CTCACTCCTCGGAAAAATAC+CGG + tig0035254:3532-3551 Msa1454520:intron 45.0%
TTGTACAGAATTCTCCAGGG+AGG + tig0035254:3810-3829 Msa1454520:CDS 45.0%
TGAACTCAACACGGTTGATC+TGG - tig0035254:4176-4195 None:intergenic 45.0%
CCCATCAACACATTCCTTAC+AGG + tig0035254:4420-4439 Msa1454520:CDS 45.0%
GGGAAAAATAACGACTAGGG+AGG + tig0035254:4617-4636 Msa1454520:intron 45.0%
TATCTGGGCTGCTGCTATAT+TGG + tig0035254:4804-4823 Msa1454520:intron 45.0%
ATCTGGGCTGCTGCTATATT+GGG + tig0035254:4805-4824 Msa1454520:intron 45.0%
TGGGAATTTGACAAGGACTG+GGG + tig0035254:4824-4843 Msa1454520:intron 45.0%
ACAAGGACTGGGGTTAAATG+TGG + tig0035254:4834-4853 Msa1454520:intron 45.0%
! ACAACCAAGCCTTATACGTG+GGG - tig0035254:4978-4997 None:intergenic 45.0%
! CAACAACCAAGCCTTATACG+TGG - tig0035254:4980-4999 None:intergenic 45.0%
GCTTAACTCCTTGCAGTGTT+TGG + tig0035254:5068-5087 Msa1454520:intron 45.0%
GATGTCAGGGATAGGAACAT+AGG - tig0035254:5335-5354 None:intergenic 45.0%
ACAACAGAGATGTCAGGGAT+AGG - tig0035254:5343-5362 None:intergenic 45.0%
! TATAGCGGAGCGGAAAAATC+AGG + tig0035254:5385-5404 Msa1454520:intron 45.0%
! AGATGGTGTCGGGAAGAATA+AGG - tig0035254:5819-5838 None:intergenic 45.0%
TGCTTATAATTCGGGACGGA+GGG - tig0035254:5903-5922 None:intergenic 45.0%
TTGCTTATAATTCGGGACGG+AGG - tig0035254:5904-5923 None:intergenic 45.0%
GCTAGCATGAATACTCACCT+TGG + tig0035254:6492-6511 Msa1454520:CDS 45.0%
GCTGGAAGACACCAAAGTAA+AGG - tig0035254:6704-6723 None:intergenic 45.0%
ATTCTTAGTGTAGGTCGGGA+AGG - tig0035254:6899-6918 None:intergenic 45.0%
AGCACCAGGAACCTAAACAA+AGG - tig0035254:7373-7392 None:intergenic 45.0%
! TTTGTTTAGGTTCCTGGTGC+TGG + tig0035254:7372-7391 Msa1454520:intron 45.0%
!! ACCAGTGCTGATAGACATAC+AGG + tig0035254:7423-7442 Msa1454520:CDS 45.0%
ACCTGTATGTCTATCAGCAC+TGG - tig0035254:7427-7446 None:intergenic 45.0%
TACGTTTGACCAAGCCCTTT+AGG - tig0035254:7603-7622 None:intergenic 45.0%
TTAACAAGTTGCTTGGGGTG+AGG + tig0035254:7642-7661 Msa1454520:intron 45.0%
CGAGCTCAAAATCACATGCA+GGG - tig0035254:7677-7696 None:intergenic 45.0%
! CCTGCATGTGATTTTGAGCT+CGG + tig0035254:7675-7694 Msa1454520:intron 45.0%
TGTCTCTTACAGGAGCAGAA+GGG + tig0035254:7956-7975 Msa1454520:intron 45.0%
AATCCACCGAAACCAAACCA+GGG - tig0035254:7987-8006 None:intergenic 45.0%
!! GGCTTTATTTGGGAGTTAGG+AGG + tig0035254:8118-8137 Msa1454520:intron 45.0%
! TTAGGAGGAAAAGGGTGTGT+TGG + tig0035254:8133-8152 Msa1454520:intron 45.0%
! TAGGAGGAAAAGGGTGTGTT+GGG + tig0035254:8134-8153 Msa1454520:intron 45.0%
! GAAAAGGGTGTGTTGGGAAA+TGG + tig0035254:8140-8159 Msa1454520:intron 45.0%
GGTGTGTTGGGAAATGGAAA+GGG + tig0035254:8146-8165 Msa1454520:intron 45.0%
CTCAATAATTTGATCCGGGG+AGG - tig0035254:8313-8332 None:intergenic 45.0%
!! GTTGAGTGTTGACTAACGGA+AGG - tig0035254:8474-8493 None:intergenic 45.0%
TCAACACTCAACACTGACGA+GGG + tig0035254:8482-8501 Msa1454520:intron 45.0%
TGATTTCAGCCTCGGCAATT+TGG + tig0035254:8641-8660 Msa1454520:intron 45.0%
CTGACCCACACTATTGTGTT+TGG + tig0035254:8989-9008 Msa1454520:intron 45.0%
CGTCCCAAACACAATAGTGT+GGG - tig0035254:8996-9015 None:intergenic 45.0%
CCACACTATTGTGTTTGGGA+CGG + tig0035254:8994-9013 Msa1454520:intron 45.0%
! TTGTGATGGAGAAGCTTGAG+TGG + tig0035254:9080-9099 Msa1454520:intron 45.0%
!! CCTTGTCAGCGTTGATTAAC+CGG + tig0035254:9319-9338 Msa1454520:intron 45.0%
GAAAAATAACCCCTCGTGCA+AGG + tig0035254:9490-9509 Msa1454520:intron 45.0%
!! TAAGGCTTTGGAGAAAGAGG+GGG - tig0035254:9555-9574 None:intergenic 45.0%
!! CTAAGGCTTTGGAGAAAGAG+GGG - tig0035254:9556-9575 None:intergenic 45.0%
!! CCTAAGGCTTTGGAGAAAGA+GGG - tig0035254:9557-9576 None:intergenic 45.0%
GCAAACAAAGCCTAAGGCTT+TGG - tig0035254:9567-9586 None:intergenic 45.0%
GTTTGCAAGTTTGGAGAGGA+AGG + tig0035254:9581-9600 Msa1454520:intron 45.0%
ACATTGTGAGGGAAAGGCTT+TGG + tig0035254:9654-9673 Msa1454520:intron 45.0%
CATTGTGAGGGAAAGGCTTT+GGG + tig0035254:9655-9674 Msa1454520:intron 45.0%
ATTGTGAGGGAAAGGCTTTG+GGG + tig0035254:9656-9675 Msa1454520:intron 45.0%
! TGTATTGGAGGAGGGTTTTG+AGG + tig0035254:9732-9751 Msa1454520:intron 45.0%
!! GTATTGGAGGAGGGTTTTGA+GGG + tig0035254:9733-9752 Msa1454520:intron 45.0%
!!! TATTGGAGGAGGGTTTTGAG+GGG + tig0035254:9734-9753 Msa1454520:intron 45.0%
!! AGCAACTTTTGCTTTTGCGG+AGG - tig0035254:10338-10357 None:intergenic 45.0%
GGATCCGAACTTGAATTTCC+AGG + tig0035254:10389-10408 Msa1454520:three_prime_UTR 45.0%
! GCACAATCACCCATTTTGAG+TGG - tig0035254:10433-10452 None:intergenic 45.0%
TACACTTCACAGGACCACAA+AGG + tig0035254:10556-10575 Msa1454520:three_prime_UTR 45.0%
ATTTCCAGACACTTGCATGG+TGG - tig0035254:10647-10666 None:intergenic 45.0%
! AGCTTGATAGCAACCACACA+AGG - tig0035254:10701-10720 None:intergenic 45.0%
CACTACCGATCTTCCTACCA+AGG - tig0035254:2660-2679 None:intergenic 50.0%
CTTGGTAGGAAGATCGGTAG+TGG + tig0035254:2658-2677 Msa1454520:CDS 50.0%
! GATCGGTAGTGGTTCCTTTG+GGG + tig0035254:2669-2688 Msa1454520:CDS 50.0%
TTGGGGGTAGATGGAGGAAA+TGG - tig0035254:3171-3190 None:intergenic 50.0%
CTCGCTTCCTATTTCCTTGG+AGG + tig0035254:3218-3237 Msa1454520:intron 50.0%
TGAGCACCCTCCAAGGAAAT+AGG - tig0035254:3228-3247 None:intergenic 50.0%
TGAGCTGCTACACTGTCTCA+TGG + tig0035254:3415-3434 Msa1454520:intron 50.0%
TTTCCGAGGAGTGAGTGGAA+TGG - tig0035254:3527-3546 None:intergenic 50.0%
TCATGAATTGAGGGGGACAC+CGG - tig0035254:3554-3573 None:intergenic 50.0%
TGCTGATCAAATGGTAGGCC+CGG + tig0035254:4075-4094 Msa1454520:intron 50.0%
ATGCATATCGACGTGCATGC+AGG + tig0035254:4349-4368 Msa1454520:intron 50.0%
TATACGTGGGGTCAGCTACA+TGG - tig0035254:4966-4985 None:intergenic 50.0%
TGTAGCTGACCCCACGTATA+AGG + tig0035254:4966-4985 Msa1454520:intron 50.0%
ATAGGAACATAGGAGCCCTC+GGG - tig0035254:5325-5344 None:intergenic 50.0%
GATAGGAACATAGGAGCCCT+CGG - tig0035254:5326-5345 None:intergenic 50.0%
CGCATGTCAGAAGTGGAAAG+CGG + tig0035254:5471-5490 Msa1454520:intron 50.0%
CCTGGTCTAAGCAGACAGAA+TGG - tig0035254:5559-5578 None:intergenic 50.0%
CCATTCTGTCTGCTTAGACC+AGG + tig0035254:5556-5575 Msa1454520:intron 50.0%
CTAGCGGGATGCAGGAAAAT+AGG - tig0035254:5742-5761 None:intergenic 50.0%
!! AGGATTTTCTAGCGGGATGC+AGG - tig0035254:5750-5769 None:intergenic 50.0%
GCTAGCGTATCTTGCAGTTC+CGG - tig0035254:6478-6497 None:intergenic 50.0%
TGATGTACTTCCTGAGAGGG+AGG + tig0035254:6662-6681 Msa1454520:CDS 50.0%
! CCTTACTCCAGGCCTTATGT+CGG + tig0035254:6924-6943 Msa1454520:intron 50.0%
! CTTACTCCAGGCCTTATGTC+GGG + tig0035254:6925-6944 Msa1454520:intron 50.0%
! TTACTCCAGGCCTTATGTCG+GGG + tig0035254:6926-6945 Msa1454520:intron 50.0%
GGTTGGATAACCCCGACATA+AGG - tig0035254:6939-6958 None:intergenic 50.0%
CTTCACGGATAAACAGGTCG+CGG - tig0035254:7042-7061 None:intergenic 50.0%
ACACTTACAATTCCCCGTGC+TGG - tig0035254:7280-7299 None:intergenic 50.0%
!! CTATCAGCACTGGTAACAGC+AGG - tig0035254:7417-7436 None:intergenic 50.0%
GAAGTGGAACCTAAAGGGCT+TGG + tig0035254:7591-7610 Msa1454520:intron 50.0%
! GGGCTTGGTCAAACGTAGTT+AGG + tig0035254:7606-7625 Msa1454520:intron 50.0%
CCGAGCTCAAAATCACATGC+AGG - tig0035254:7678-7697 None:intergenic 50.0%
CTGTCTCTTACAGGAGCAGA+AGG + tig0035254:7955-7974 Msa1454520:intron 50.0%
ATCCACCGAAACCAAACCAG+GGG - tig0035254:7986-8005 None:intergenic 50.0%
GAATCCACCGAAACCAAACC+AGG - tig0035254:7988-8007 None:intergenic 50.0%
! TGGTTTCGGTGGATTCCTCT+AGG + tig0035254:7992-8011 Msa1454520:CDS 50.0%
TTCCTCTAGGCGCAGAATGT+CGG + tig0035254:8005-8024 Msa1454520:CDS 50.0%
GGGTGTGTTGGGAAATGGAA+AGG + tig0035254:8145-8164 Msa1454520:intron 50.0%
TGGGAAATGGAAAGGGAGAG+AGG + tig0035254:8153-8172 Msa1454520:intron 50.0%
GGGAAATGGAAAGGGAGAGA+GGG + tig0035254:8154-8173 Msa1454520:intron 50.0%
GTCAACACTCAACACTGACG+AGG + tig0035254:8481-8500 Msa1454520:intron 50.0%
! CTGGGTTTTCCAAATTGCCG+AGG - tig0035254:8653-8672 None:intergenic 50.0%
CCGTCCCAAACACAATAGTG+TGG - tig0035254:8997-9016 None:intergenic 50.0%
CCGGTTAATCAACGCTGACA+AGG - tig0035254:9322-9341 None:intergenic 50.0%
AAATAACCCCTCGTGCAAGG+TGG + tig0035254:9493-9512 Msa1454520:intron 50.0%
ATCTAACCACCTTGCACGAG+GGG - tig0035254:9502-9521 None:intergenic 50.0%
CATCTAACCACCTTGCACGA+GGG - tig0035254:9503-9522 None:intergenic 50.0%
CTCGTGCAAGGTGGTTAGAT+GGG + tig0035254:9502-9521 Msa1454520:intron 50.0%
TCGTGCAAGGTGGTTAGATG+GGG + tig0035254:9503-9522 Msa1454520:intron 50.0%
TTTGGAGAAAGAGGGGGAGA+GGG - tig0035254:9549-9568 None:intergenic 50.0%
CCCTCTTTCTCCAAAGCCTT+AGG + tig0035254:9554-9573 Msa1454520:intron 50.0%
!! GCCTAAGGCTTTGGAGAAAG+AGG - tig0035254:9558-9577 None:intergenic 50.0%
CAAGTTTGGAGAGGAAGGGA+GGG + tig0035254:9586-9605 Msa1454520:intron 50.0%
AAGTTTGGAGAGGAAGGGAG+GGG + tig0035254:9587-9606 Msa1454520:intron 50.0%
GGGGAGGGGTTTGGAAAAAA+AGG + tig0035254:9606-9625 Msa1454520:intron 50.0%
! TTGTGAGGGAAAGGCTTTGG+GGG + tig0035254:9657-9676 Msa1454520:intron 50.0%
!!! AGGAGGGTTTTGAGGGGTTT+TGG + tig0035254:9740-9759 Msa1454520:intron 50.0%
!!! AGGGTTTTGAGGGGTTTTGG+AGG + tig0035254:9743-9762 Msa1454520:intron 50.0%
!!! GGGTTTTGAGGGGTTTTGGA+GGG + tig0035254:9744-9763 Msa1454520:intron 50.0%
TTTGAGAGTTTGGAGGGGAG+GGG - tig0035254:9815-9834 None:intergenic 50.0%
GTTTGAGAGTTTGGAGGGGA+GGG - tig0035254:9816-9835 None:intergenic 50.0%
TGTTTGAGAGTTTGGAGGGG+AGG - tig0035254:9817-9836 None:intergenic 50.0%
! TTCTATGTGCTGCTGCTCCA+GGG - tig0035254:10123-10142 None:intergenic 50.0%
! ATTCTATGTGCTGCTGCTCC+AGG - tig0035254:10124-10143 None:intergenic 50.0%
TGGGGATCAGAAGATCCGAT+TGG - tig0035254:10169-10188 None:intergenic 50.0%
ATTGGCAGTTCACTTCTGGC+CGG + tig0035254:10475-10494 Msa1454520:three_prime_UTR 50.0%
GTTTCCACCATGCAAGTGTC+TGG + tig0035254:10640-10659 Msa1454520:three_prime_UTR 50.0%
GAACACGCGTGGACAGAGTT+TGG + tig0035254:2146-2165 Msa1454520:five_prime_UTR 55.0%
GCCGGTTGAGCTAGAACTTG+TGG - tig0035254:3079-3098 None:intergenic 55.0%
AATTGCTAGGTCGGACGCCA+TGG + tig0035254:3110-3129 Msa1454520:intron 55.0%
AAGCACTTGAGCACCCTCCA+AGG - tig0035254:3235-3254 None:intergenic 55.0%
! GGGACACCGGTATTTTTCCG+AGG - tig0035254:3541-3560 None:intergenic 55.0%
TTGGACTCGTACAGCAGCTG+AGG - tig0035254:3789-3808 None:intergenic 55.0%
! ATTAGGAAGGCGTGCGAACC+AGG + tig0035254:4251-4270 Msa1454520:CDS 55.0%
CTGACCCCACGTATAAGGCT+TGG + tig0035254:4971-4990 Msa1454520:intron 55.0%
TAGGAACATAGGAGCCCTCG+GGG - tig0035254:5324-5343 None:intergenic 55.0%
AAAATCAGGACCACCGCACC+AGG + tig0035254:5399-5418 Msa1454520:intron 55.0%
GAAGTGGAAAGCGGCCAAAG+CGG + tig0035254:5480-5499 Msa1454520:intron 55.0%
TAAGCTGATGGTTGGGGCCT+TGG + tig0035254:6224-6243 Msa1454520:intron 55.0%
! CCTGCTTTAAGTCCCTGCCA+AGG - tig0035254:6767-6786 None:intergenic 55.0%
CCTTGGCAGGGACTTAAAGC+AGG + tig0035254:6764-6783 Msa1454520:CDS 55.0%
CCGACATAAGGCCTGGAGTA+AGG - tig0035254:6927-6946 None:intergenic 55.0%
GATAACCCCGACATAAGGCC+TGG - tig0035254:6934-6953 None:intergenic 55.0%
CGCGACCTGTTTATCCGTGA+AGG + tig0035254:7040-7059 Msa1454520:CDS 55.0%
!! AGCTTGCTACACCTCCAGCA+CGG + tig0035254:7263-7282 Msa1454520:CDS 55.0%
CTTACAATTCCCCGTGCTGG+AGG - tig0035254:7277-7296 None:intergenic 55.0%
AGCAGGTGGCATTGCAGAAC+TGG - tig0035254:7400-7419 None:intergenic 55.0%
!! TCAGCACTGGTAACAGCAGG+TGG - tig0035254:7414-7433 None:intergenic 55.0%
GTTAGCCGACCCCACTTAGT+GGG - tig0035254:7546-7565 None:intergenic 55.0%
TGTTAGCCGACCCCACTTAG+TGG - tig0035254:7547-7566 None:intergenic 55.0%
!! GCAACCCCCTGGTTTGGTTT+CGG + tig0035254:7978-7997 Msa1454520:CDS 55.0%
TCCACCGAAACCAAACCAGG+GGG - tig0035254:7985-8004 None:intergenic 55.0%
TCCTCTAGGCGCAGAATGTC+GGG + tig0035254:8006-8025 Msa1454520:CDS 55.0%
!!! GGGAGGGTTTTAGAGGGCTT+TGG - tig0035254:8296-8315 None:intergenic 55.0%
!! AAGCCCTCTAAAACCCTCCC+CGG + tig0035254:8296-8315 Msa1454520:intron 55.0%
!!! GATCCGGGGAGGGTTTTAGA+GGG - tig0035254:8302-8321 None:intergenic 55.0%
!! TGATCCGGGGAGGGTTTTAG+AGG - tig0035254:8303-8322 None:intergenic 55.0%
ACACTCAACACTGACGAGGG+TGG + tig0035254:8485-8504 Msa1454520:intron 55.0%
CCATCTAACCACCTTGCACG+AGG - tig0035254:9504-9523 None:intergenic 55.0%
CCTCGTGCAAGGTGGTTAGA+TGG + tig0035254:9501-9520 Msa1454520:intron 55.0%
! CTTTGGAGAAAGAGGGGGAG+AGG - tig0035254:9550-9569 None:intergenic 55.0%
GCAAGTTTGGAGAGGAAGGG+AGG + tig0035254:9585-9604 Msa1454520:intron 55.0%
!! GGGGAAGGGAAGGCTTTAGA+GGG - tig0035254:9796-9815 None:intergenic 55.0%
! AGGGGAAGGGAAGGCTTTAG+AGG - tig0035254:9797-9816 None:intergenic 55.0%
TGTTCGTACACGCACTGCTG+AGG + tig0035254:10093-10112 Msa1454520:CDS 55.0%
CTGATCCCCAGAGAGTAGCA+CGG + tig0035254:10179-10198 Msa1454520:CDS 55.0%
!! TGAAAGTGCCCTTAGGGGCA+TGG + tig0035254:10234-10253 Msa1454520:CDS 55.0%
CAAACCGTCCATGCCCCTAA+GGG - tig0035254:10245-10264 None:intergenic 55.0%
CCACGCGTGTTCTGTACGAG+TGG - tig0035254:2138-2157 None:intergenic 60.0%
CCACTCGTACAGAACACGCG+TGG + tig0035254:2135-2154 Msa1454520:five_prime_UTR 60.0%
CCACACAAGTGGAGGAGCCA+TGG - tig0035254:3130-3149 None:intergenic 60.0%
CCATGGCTCCTCCACTTGTG+TGG + tig0035254:3127-3146 Msa1454520:intron 60.0%
GTTGTCAATAGCAGCCGCGC+CGG + tig0035254:5358-5377 Msa1454520:intron 60.0%
TTCCGCTCCGCTATAGCAGC+CGG - tig0035254:5380-5399 None:intergenic 60.0%
! ATGGTTGGGGCCTTGGTGGT+AGG + tig0035254:6231-6250 Msa1454520:intron 60.0%
! GCTTGCTACACCTCCAGCAC+GGG + tig0035254:7264-7283 Msa1454520:CDS 60.0%
CTTGCTACACCTCCAGCACG+GGG + tig0035254:7265-7284 Msa1454520:CDS 60.0%
! GCAGAACTGGTTCCAGCACC+AGG - tig0035254:7387-7406 None:intergenic 60.0%
AGAAGGGCAACCCCCTGGTT+TGG + tig0035254:7972-7991 Msa1454520:CDS 60.0%
!! ACCCCCTGGTTTGGTTTCGG+TGG + tig0035254:7981-8000 Msa1454520:CDS 60.0%
TCCCGACATTCTGCGCCTAG+AGG - tig0035254:8010-8029 None:intergenic 60.0%
TTTGGAGAGGAAGGGAGGGG+AGG + tig0035254:9590-9609 Msa1454520:intron 60.0%
TTGGAGAGGAAGGGAGGGGA+GGG + tig0035254:9591-9610 Msa1454520:intron 60.0%
GAGTTTGGAGGGGAGGGGAA+GGG - tig0035254:9810-9829 None:intergenic 60.0%
AGAGTTTGGAGGGGAGGGGA+AGG - tig0035254:9811-9830 None:intergenic 60.0%
! CCAGACCGTGCTACTCTCTG+GGG - tig0035254:10187-10206 None:intergenic 60.0%
! CCCAGACCGTGCTACTCTCT+GGG - tig0035254:10188-10207 None:intergenic 60.0%
CCCAGAGAGTAGCACGGTCT+GGG + tig0035254:10185-10204 Msa1454520:CDS 60.0%
! TCCCAGACCGTGCTACTCTC+TGG - tig0035254:10189-10208 None:intergenic 60.0%
! AGTGCCCTTAGGGGCATGGA+CGG + tig0035254:10238-10257 Msa1454520:CDS 60.0%
GCAAACCGTCCATGCCCCTA+AGG - tig0035254:10246-10265 None:intergenic 60.0%
! GCGTCGGCGCATGTCAGAAG+TGG + tig0035254:5464-5483 Msa1454520:intron 65.0%
GCTGATGGTTGGGGCCTTGG+TGG + tig0035254:6227-6246 Msa1454520:intron 65.0%
TGGAGAGGAAGGGAGGGGAG+GGG + tig0035254:9592-9611 Msa1454520:intron 65.0%
AGGAAGGGAGGGGAGGGGTT+TGG + tig0035254:9597-9616 Msa1454520:intron 65.0%
TTGGAGGGGAGGGGAAGGGA+AGG - tig0035254:9806-9825 None:intergenic 65.0%
CCCCAGAGAGTAGCACGGTC+TGG + tig0035254:10184-10203 Msa1454520:CDS 65.0%
!! AGCCGCGCCGGCTGCTATAG+CGG + tig0035254:5370-5389 Msa1454520:intron 70.0%
CTCCGCTATAGCAGCCGGCG+CGG - tig0035254:5375-5394 None:intergenic 70.0%
! CGCCGGCTGCTATAGCGGAG+CGG + tig0035254:5375-5394 Msa1454520:intron 70.0%
! AGGCTGCGTCGGCGCATGTC+AGG + tig0035254:5439-5458 Msa1454520:intron 70.0%
CGGCGCATGTCAGGCTGCGT+CGG + tig0035254:5448-5467 Msa1454520:intron 70.0%
GGAGCAGAAGGGCAACCCCC+TGG + tig0035254:7967-7986 Msa1454520:intron 70.0%
! CGCACTGCTGAGGCTAGCCC+TGG + tig0035254:10103-10122 Msa1454520:CDS 70.0%
ACCACCGCACCAGGCCGCGT+CGG + tig0035254:5408-5427 Msa1454520:intron 75.0%
! CAGCCTGACACGCGCCGACG+CGG - tig0035254:5425-5444 None:intergenic 75.0%
CGGCGCGTGTCAGGCTGCGT+CGG + tig0035254:5428-5447 Msa1454520:intron 75.0%
!! TGACACGCGCCGACGCGGCC+TGG - tig0035254:5420-5439 None:intergenic 80.0%
!! AGGCCGCGTCGGCGCGTGTC+AGG + tig0035254:5419-5438 Msa1454520:intron 80.0%
! GCCGACGCGGCCTGGTGCGG+TGG - tig0035254:5412-5431 None:intergenic 85.0%
!! CGCGCCGACGCGGCCTGGTG+CGG - tig0035254:5415-5434 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
tig0035254 gene 2040 10809 2040 ID=Msa1454520;Name=Msa1454520
tig0035254 mRNA 2040 10809 2040 ID=Msa1454520-mRNA-1;Parent=Msa1454520;Name=Msa1454520-mRNA-1;_AED=0.11;_eAED=0.11;_QI=588|1|1|1|1|1|14|512|454
tig0035254 exon 2040 2703 2040 ID=Msa1454520-mRNA-1:exon:19766;Parent=Msa1454520-mRNA-1
tig0035254 exon 2794 2834 2794 ID=Msa1454520-mRNA-1:exon:19767;Parent=Msa1454520-mRNA-1
tig0035254 exon 3765 3834 3765 ID=Msa1454520-mRNA-1:exon:19768;Parent=Msa1454520-mRNA-1
tig0035254 exon 3939 4087 3939 ID=Msa1454520-mRNA-1:exon:19769;Parent=Msa1454520-mRNA-1
tig0035254 exon 4177 4272 4177 ID=Msa1454520-mRNA-1:exon:19770;Parent=Msa1454520-mRNA-1
tig0035254 exon 4371 4441 4371 ID=Msa1454520-mRNA-1:exon:19771;Parent=Msa1454520-mRNA-1
tig0035254 exon 6458 6519 6458 ID=Msa1454520-mRNA-1:exon:19772;Parent=Msa1454520-mRNA-1
tig0035254 exon 6620 6683 6620 ID=Msa1454520-mRNA-1:exon:19773;Parent=Msa1454520-mRNA-1
tig0035254 exon 6760 6844 6760 ID=Msa1454520-mRNA-1:exon:19774;Parent=Msa1454520-mRNA-1
tig0035254 exon 6935 7061 6935 ID=Msa1454520-mRNA-1:exon:19775;Parent=Msa1454520-mRNA-1
tig0035254 exon 7209 7291 7209 ID=Msa1454520-mRNA-1:exon:19776;Parent=Msa1454520-mRNA-1
tig0035254 exon 7381 7444 7381 ID=Msa1454520-mRNA-1:exon:19777;Parent=Msa1454520-mRNA-1
tig0035254 exon 7968 8044 7968 ID=Msa1454520-mRNA-1:exon:19778;Parent=Msa1454520-mRNA-1
tig0035254 exon 9998 10809 9998 ID=Msa1454520-mRNA-1:exon:19779;Parent=Msa1454520-mRNA-1
tig0035254 five_prime_UTR 2040 2627 2040 ID=Msa1454520-mRNA-1:five_prime_utr;Parent=Msa1454520-mRNA-1
tig0035254 CDS 2628 2703 2628 ID=Msa1454520-mRNA-1:cds;Parent=Msa1454520-mRNA-1
tig0035254 CDS 2794 2834 2794 ID=Msa1454520-mRNA-1:cds;Parent=Msa1454520-mRNA-1
tig0035254 CDS 3765 3834 3765 ID=Msa1454520-mRNA-1:cds;Parent=Msa1454520-mRNA-1
tig0035254 CDS 3939 4087 3939 ID=Msa1454520-mRNA-1:cds;Parent=Msa1454520-mRNA-1
tig0035254 CDS 4177 4272 4177 ID=Msa1454520-mRNA-1:cds;Parent=Msa1454520-mRNA-1
tig0035254 CDS 4371 4441 4371 ID=Msa1454520-mRNA-1:cds;Parent=Msa1454520-mRNA-1
tig0035254 CDS 6458 6519 6458 ID=Msa1454520-mRNA-1:cds;Parent=Msa1454520-mRNA-1
tig0035254 CDS 6620 6683 6620 ID=Msa1454520-mRNA-1:cds;Parent=Msa1454520-mRNA-1
tig0035254 CDS 6760 6844 6760 ID=Msa1454520-mRNA-1:cds;Parent=Msa1454520-mRNA-1
tig0035254 CDS 6935 7061 6935 ID=Msa1454520-mRNA-1:cds;Parent=Msa1454520-mRNA-1
tig0035254 CDS 7209 7291 7209 ID=Msa1454520-mRNA-1:cds;Parent=Msa1454520-mRNA-1
tig0035254 CDS 7381 7444 7381 ID=Msa1454520-mRNA-1:cds;Parent=Msa1454520-mRNA-1
tig0035254 CDS 7968 8044 7968 ID=Msa1454520-mRNA-1:cds;Parent=Msa1454520-mRNA-1
tig0035254 CDS 9998 10297 9998 ID=Msa1454520-mRNA-1:cds;Parent=Msa1454520-mRNA-1
tig0035254 three_prime_UTR 10298 10809 10298 ID=Msa1454520-mRNA-1:three_prime_utr;Parent=Msa1454520-mRNA-1
Gene Sequence

>Msa1454520

ATGGAACCTCGTGTTGGGAATAAGTTTCGCCTTGGTAGGAAGATCGGTAGTGGTTCCTTTGGGGAGATCTACTTAGGTACTAATATTCAAACTAACGAAGAGGTTGCAATTAAGCTTGAAAATGTCAAGACTAAGCATCCTCAGCTGCTGTACGAGTCCAAGTTGTACAGAATTCTCCAGGGAGGAACTGGAATTCCAAATGTTAGATGGTTTGGAGTAGAGGGAGATTACAATGTTTTAGTGATGGATCTGCTTGGACCTAGTCTTGAAGATCTATTTAACTTTTGTAGTAGAAAGTTATCACTAAAAACAGTTCTTATGCTTGCTGATCAAATGATCAACCGTGTTGAGTTCATTCATTCGAAATCATTTCTACATCGAGATATCAAACCGGATAATTTTCTAATGGGATTAGGAAGGCGTGCGAACCAGGTTTATGCTATTGATTTTGGTCTGGCTAAGAAATACAGAGATAGTTCAACCCATCAACACATTCCTTACAGGGAAAATAAAAATTTGACCGGAACTGCAAGATACGCTAGCATGAATACTCACCTTGGCATTGAACAAAGTCGAAGAGATGATTTAGAGTCTCTTGGTTATGTTTTGATGTACTTCCTGAGAGGGAGTCTTCCTTGGCAGGGACTTAAAGCAGGAACCAAGAAACAGAAGTATGAGAAAATCAGTGAAAAAAAGGTTTCTACATCGATTGAAGCCTTATGTCGGGGTTATCCAACCGAATTTGCATCATACTTCCATTACTGTCGCTCATTAAGGTTTGATGATAAGCCAGATTATGCTTATCTCAAAAGGATATTCCGCGACCTGTTTATCCGTGAAGGATTCCAGTTTGATTATGTGTTTGACTGGACCATCTTGAAGTATCAGCAATCACAGCTTGCTACACCTCCAGCACGGGGAATTGTTCCTGGTGCTGGAACCAGTTCTGCAATGCCACCTGCTGTTACCAGTGCTGATAGACATACAGGAGCAGAAGGGCAACCCCCTGGTTTGGTTTCGGTGGATTCCTCTAGGCGCAGAATGTCGGGACCCATTTTGAATACTTTATCAAGTTCCAATGTCTTGGGTCAATCAAGTGGATCATCTAGGCGAGTTGCTGTTTCTAGTAGTCGTGATGCATTTGTTGGTGCTGAGTCAGATGTTCGTACACGCACTGCTGAGGCTAGCCCTGGAGCAGCAGCACATAGAATTTTGAGCGGTCAAAGAAGTTCACCAATCGGATCTTCTGATCCCCAGAGAGTAGCACGGTCTGGGAGAAATGCTTCTCAAGCCACTAACTATGAAAGTGCCCTTAGGGGCATGGACGGTTTGCAGTTAGAAAATGATGAGAGAACCCATTATTAA
Protein sequence

>Msa1454520

MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFIHSKSFLHRDIKPDNFLMGLGRRANQVYAIDFGLAKKYRDSSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLATPPARGIVPGAGTSSAMPPAVTSADRHTGAEGQPPGLVSVDSSRRRMSGPILNTLSSSNVLGQSSGSSRRVAVSSSRDAFVGAESDVRTRTAEASPGAAAHRILSGQRSSPIGSSDPQRVARSGRNASQATNYESALRGMDGLQLENDERTHY*