Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1412470 | G7JB14 | 92.009 | 463 | 28 | 5 | 1 | 458 | 139 | 597 | 0.0 | 778 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0382480 | Msa1412470 | 0.864169 | 1.475202e-64 | -8.615850e-47 |
| Msa0432660 | Msa1412470 | 0.866752 | 2.266331e-65 | -8.615850e-47 |
| Msa0521380 | Msa1412470 | 0.843971 | 1.008808e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1412470 | MtrunA17_Chr3g0137731 | 92.009 | 463 | 28 | 5 | 1 | 458 | 139 | 597 | 0.0 | 778 |
| Msa1412470 | MtrunA17_Chr1g0176961 | 50.804 | 311 | 114 | 4 | 186 | 458 | 419 | 728 | 6.29e-102 | 322 |
| Msa1412470 | MtrunA17_Chr7g0267631 | 48.684 | 304 | 123 | 5 | 186 | 458 | 408 | 709 | 2.25e-88 | 286 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1412470 | AT3G11760.1 | 51.399 | 286 | 117 | 4 | 186 | 458 | 417 | 693 | 1.24e-95 | 305 |
| Msa1412470 | AT2G25460.2 | 40.564 | 461 | 212 | 9 | 10 | 457 | 127 | 538 | 6.57e-94 | 296 |
| Msa1412470 | AT5G04860.2 | 51.171 | 299 | 117 | 6 | 186 | 458 | 280 | 575 | 1.46e-91 | 292 |
| Msa1412470 | AT5G04860.1 | 50.836 | 299 | 118 | 6 | 186 | 458 | 431 | 726 | 7.85e-90 | 291 |
| Msa1412470 | AT2G10560.1 | 44.889 | 225 | 96 | 7 | 259 | 458 | 1 | 222 | 4.58e-52 | 178 |
| Msa1412470 | AT2G25460.1 | 37.346 | 324 | 160 | 7 | 10 | 321 | 127 | 419 | 1.09e-47 | 171 |
Find 75 sgRNAs with CRISPR-Local
Find 486 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAAGGAAATTCAAGTAAA+TGG | 0.143807 | tig0023910:+1867 | Msa1412470:CDS |
| CAACTAACTATGTAAATTCT+TGG | 0.246132 | tig0023910:-2328 | None:intergenic |
| AAACACGGGACTATAGAAAA+AGG | 0.282626 | tig0023910:+907 | Msa1412470:CDS |
| CTTGTCTTTGTCCCTGAACT+TGG | 0.295468 | tig0023910:-1108 | None:intergenic |
| TCTAAATCAAAATGTTTATC+TGG | 0.298751 | tig0023910:-2139 | None:intergenic |
| TAAAGATGAAGAAGTTAATA+AGG | 0.320412 | tig0023910:+2492 | Msa1412470:CDS |
| TTACTATATCATTGATTCAT+TGG | 0.323701 | tig0023910:+2390 | Msa1412470:CDS |
| GAGAAGTTTCATTGCTTAGA+AGG | 0.338959 | tig0023910:+2235 | Msa1412470:CDS |
| CTTTATTACAGGTTTGTCTA+AGG | 0.339470 | tig0023910:+812 | Msa1412470:intron |
| TTGAGAAAGAGGAGAAGAAA+TGG | 0.356522 | tig0023910:+2632 | Msa1412470:CDS |
| TACTATATCATTGATTCATT+GGG | 0.366292 | tig0023910:+2391 | Msa1412470:CDS |
| TTCAGGGACAAAGACAAGTT+TGG | 0.368520 | tig0023910:+1113 | Msa1412470:CDS |
| AACAACTAAAGGTCTCAAAT+TGG | 0.378951 | tig0023910:-2176 | None:intergenic |
| CAAGAATTTACATAGTTAGT+TGG | 0.387389 | tig0023910:+2329 | Msa1412470:CDS |
| TCTCTAAGATCAAACCTTCA+AGG | 0.409683 | tig0023910:+1851 | Msa1412470:CDS |
| ATTTACTTGAATTTCCTTGA+AGG | 0.411143 | tig0023910:-1865 | None:intergenic |
| GATGATTCATGTGTGATGTA+TGG | 0.412386 | tig0023910:+2460 | Msa1412470:CDS |
| TCTAAGCAATGAAACTTCTC+AGG | 0.424509 | tig0023910:-2232 | None:intergenic |
| CAAGTTTGGATATCAATAGA+AGG | 0.433928 | tig0023910:+1127 | Msa1412470:CDS |
| GATGAAGAAGTTAATAAGGA+TGG | 0.435976 | tig0023910:+2496 | Msa1412470:CDS |
| TCAAGGAAATTCAAGTAAAT+GGG | 0.436962 | tig0023910:+1868 | Msa1412470:CDS |
| AATCCATCAAACTCCTTTCA+CGG | 0.437364 | tig0023910:+1200 | Msa1412470:CDS |
| GTCTAAGGTTATTGAAGCAC+AGG | 0.440478 | tig0023910:+827 | Msa1412470:CDS |
| ATACCGTGAAAGGAGTTTGA+TGG | 0.448932 | tig0023910:-1203 | None:intergenic |
| GGGGACCCATCTGACTCATA+TGG | 0.466820 | tig0023910:-994 | None:intergenic |
| GAAAATCAATCTGCAATTGC+CGG | 0.467500 | tig0023910:-2678 | None:intergenic |
| AGTTAGACAACTTGAGAAAG+AGG | 0.469446 | tig0023910:+2621 | Msa1412470:CDS |
| TAAAGAAAGAGGAGCAGAAA+TGG | 0.471519 | tig0023910:+8326 | Msa1412470:CDS |
| CACTGGCTTCATACAAATCA+AGG | 0.476684 | tig0023910:+2022 | Msa1412470:CDS |
| CTTTGATCAACGAAGTGAAA+AGG | 0.480127 | tig0023910:+1955 | Msa1412470:CDS |
| GGATATCAATAGAAGGTTCA+AGG | 0.483015 | tig0023910:+1134 | Msa1412470:CDS |
| TCACACAAGGTTCATCTGAA+TGG | 0.483310 | tig0023910:+2077 | Msa1412470:CDS |
| CAACGAAGTGAAAAGGCATC+TGG | 0.483478 | tig0023910:+1962 | Msa1412470:CDS |
| AAAGTAACTCTTGACTCTGT+GGG | 0.490195 | tig0023910:-1084 | None:intergenic |
| TTGTCAAATTGAGTTCTTGT+TGG | 0.492779 | tig0023910:-2049 | None:intergenic |
| TGCAATTGCCGGTGAAGATA+AGG | 0.492998 | tig0023910:-2667 | None:intergenic |
| TTTCAAATCCTTATCTTCAC+CGG | 0.501952 | tig0023910:+2659 | Msa1412470:CDS |
| ATGAAGAAGTTAATAAGGAT+GGG | 0.505362 | tig0023910:+2497 | Msa1412470:CDS |
| TTCTGAGGCAGAACAACTAA+AGG | 0.508890 | tig0023910:-2187 | None:intergenic |
| TGAACTGCCACCGCTTGTTG+TGG | 0.511778 | tig0023910:-1049 | None:intergenic |
| AGTTAGACAGCTAAAGAAAG+AGG | 0.520997 | tig0023910:+8315 | Msa1412470:CDS |
| GATATCAATAGAAGGTTCAA+GGG | 0.528253 | tig0023910:+1135 | Msa1412470:CDS |
| ATGATTCATGTGTGATGTAT+GGG | 0.535106 | tig0023910:+2461 | Msa1412470:CDS |
| TAGAATTGACATACCGTGAA+AGG | 0.538980 | tig0023910:-1213 | None:intergenic |
| CAACATCCATATGAGTCAGA+TGG | 0.542549 | tig0023910:+988 | Msa1412470:CDS |
| TAGTTGCACTAATATCTCAC+TGG | 0.557473 | tig0023910:+2005 | Msa1412470:CDS |
| TGAAGAAGTTAATAAGGATG+GGG | 0.560236 | tig0023910:+2498 | Msa1412470:CDS |
| AACAATGTGAAGTTTGATGA+AGG | 0.564539 | tig0023910:+958 | Msa1412470:CDS |
| CAATAGAAGGTTCAAGGGGT+GGG | 0.566587 | tig0023910:+1140 | Msa1412470:CDS |
| AGCAATAACCTTTGAAAACA+CGG | 0.571826 | tig0023910:+870 | Msa1412470:CDS |
| AACATCCATATGAGTCAGAT+GGG | 0.577022 | tig0023910:+989 | Msa1412470:CDS |
| TCAATAGAAGGTTCAAGGGG+TGG | 0.579144 | tig0023910:+1139 | Msa1412470:CDS |
| CTAAGCAATGAAACTTCTCA+GGG | 0.586124 | tig0023910:-2231 | None:intergenic |
| TGTAGAAGTTTCTAATTGAG+CGG | 0.593072 | tig0023910:-1178 | None:intergenic |
| TGACAAGGATGGAGGTGCAA+AGG | 0.597160 | tig0023910:+8214 | Msa1412470:intron |
| AGAAAGAGGAGCAGAAATGG+AGG | 0.610337 | tig0023910:+8329 | Msa1412470:CDS |
| GACTCATCAGAGTCAAACAC+AGG | 0.617667 | tig0023910:-1015 | None:intergenic |
| AAAAGTAACTCTTGACTCTG+TGG | 0.625814 | tig0023910:-1085 | None:intergenic |
| GAAGAAGTTAATAAGGATGG+GGG | 0.628518 | tig0023910:+2499 | Msa1412470:CDS |
| CAAGAAGTTGACAAGGATGG+AGG | 0.628997 | tig0023910:+8206 | Msa1412470:intron |
| AAACCTGTGTATGATTTCTG+AGG | 0.630083 | tig0023910:-2202 | None:intergenic |
| CAGATGAACCTTGTGTGATG+AGG | 0.645553 | tig0023910:-2072 | None:intergenic |
| TTTGACAACCTCATCACACA+AGG | 0.646349 | tig0023910:+2064 | Msa1412470:CDS |
| AGGATGGAGGTGCAAAGGTG+AGG | 0.647236 | tig0023910:+8219 | Msa1412470:intron |
| AACGAATCCACAACAAGCGG+TGG | 0.661870 | tig0023910:+1042 | Msa1412470:CDS |
| GGTGCAAAGAGTAGTTCAAG+AGG | 0.665895 | tig0023910:+2520 | Msa1412470:CDS |
| CTGCCTCAGAAATCATACAC+AGG | 0.669234 | tig0023910:+2199 | Msa1412470:CDS |
| TAAAGTCAGATAAGAAACAC+GGG | 0.683630 | tig0023910:+893 | Msa1412470:CDS |
| AAGTAACTCTTGACTCTGTG+GGG | 0.684551 | tig0023910:-1083 | None:intergenic |
| TCGAACGAATCCACAACAAG+CGG | 0.686566 | tig0023910:+1039 | Msa1412470:CDS |
| ACTCATCAGAGTCAAACACA+GGG | 0.693622 | tig0023910:-1014 | None:intergenic |
| ATATCAATAGAAGGTTCAAG+GGG | 0.705222 | tig0023910:+1136 | Msa1412470:CDS |
| GTAAAGTCAGATAAGAAACA+CGG | 0.708686 | tig0023910:+892 | Msa1412470:CDS |
| TAAGCAATGAAACTTCTCAG+GGG | 0.754329 | tig0023910:-2230 | None:intergenic |
| CTCATCAGAGTCAAACACAG+GGG | 0.787704 | tig0023910:-1013 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATTATTTAATTAATTAA+CGG | - | tig0023910:770-789 | None:intergenic | 0.0% |
| !! | TTAATTATTATTATTATTTA+TGG | + | tig0023910:4400-4419 | Msa1412470:intron | 0.0% |
| !!! | AAATAATTAATTTTTAACGA+AGG | + | tig0023910:780-799 | Msa1412470:intron | 10.0% |
| !! | TTTAAAAAATTCAATATTCA+AGG | - | tig0023910:1406-1425 | None:intergenic | 10.0% |
| !! | TGATGAAATTTAATAATTAA+GGG | - | tig0023910:3776-3795 | None:intergenic | 10.0% |
| !! | TTGATGAAATTTAATAATTA+AGG | - | tig0023910:3777-3796 | None:intergenic | 10.0% |
| !! | TAAAAAAAAATTAATCTAAC+TGG | - | tig0023910:4500-4519 | None:intergenic | 10.0% |
| !!! | AATATTTAATTTATTTGACA+TGG | + | tig0023910:6624-6643 | Msa1412470:intron | 10.0% |
| !!! | ATATTTAATTTATTTGACAT+GGG | + | tig0023910:6625-6644 | Msa1412470:intron | 10.0% |
| !! | TGAAATCATTAAAAAAAAAA+AGG | - | tig0023910:7309-7328 | None:intergenic | 10.0% |
| !!! | AAATAGTTTTCTTCAAAAAA+AGG | - | tig0023910:1381-1400 | None:intergenic | 15.0% |
| !!! | AATTATTTCTTTATCATTAG+CGG | + | tig0023910:1444-1463 | Msa1412470:intron | 15.0% |
| !!! | TAATTTTCTTGATTTAGTTT+AGG | + | tig0023910:1760-1779 | Msa1412470:intron | 15.0% |
| !!! | AATTTTCTTGATTTAGTTTA+GGG | + | tig0023910:1761-1780 | Msa1412470:intron | 15.0% |
| !!! | GATTTTTCACTTATATATAA+TGG | + | tig0023910:2964-2983 | Msa1412470:intron | 15.0% |
| !! | TTATAAAGTAAAATTTGTGT+GGG | + | tig0023910:3497-3516 | Msa1412470:intron | 15.0% |
| !!! | TTAGATTTACTATTCATTTT+TGG | + | tig0023910:4544-4563 | Msa1412470:intron | 15.0% |
| !! | ATGGAAATTATATAGTTATA+AGG | + | tig0023910:6673-6692 | Msa1412470:intron | 15.0% |
| !! | TGGAAATTATATAGTTATAA+GGG | + | tig0023910:6674-6693 | Msa1412470:intron | 15.0% |
| !! | TATTAAATTTATCTATCAAG+TGG | - | tig0023910:6831-6850 | None:intergenic | 15.0% |
| !!! | ACACAATTAAGTTTTTTAAT+AGG | + | tig0023910:7864-7883 | Msa1412470:intron | 15.0% |
| !! | TTATTATGTCTTTCAAAAAA+AGG | + | tig0023910:8168-8187 | Msa1412470:intron | 15.0% |
| !! | TATAGTAATGAAGAAAAGAA+TGG | - | tig0023910:119-138 | None:intergenic | 20.0% |
| !! | TTGCTTTCTCATTTATTAAT+TGG | + | tig0023910:158-177 | Msa1412470:intron | 20.0% |
| !!! | TAATATTTTAGTACGAAACA+TGG | - | tig0023910:249-268 | None:intergenic | 20.0% |
| !! | GAATGAATTGATTAATTACA+TGG | + | tig0023910:307-326 | Msa1412470:intron | 20.0% |
| !! | GATTTGTGAACATAAATAAT+AGG | + | tig0023910:461-480 | Msa1412470:intron | 20.0% |
| !! | ACATTGATCTGATAAATATA+TGG | - | tig0023910:539-558 | None:intergenic | 20.0% |
| !!! | TTTTGCAAACAATTGATTTT+TGG | - | tig0023910:728-747 | None:intergenic | 20.0% |
| !!! | ATTATTTCTTTATCATTAGC+GGG | + | tig0023910:1445-1464 | Msa1412470:intron | 20.0% |
| !!! | ATTTTCTTGATTTAGTTTAG+GGG | + | tig0023910:1762-1781 | Msa1412470:intron | 20.0% |
| !!! | AAATATATTTTAAGCAGAGA+TGG | + | tig0023910:1896-1915 | Msa1412470:CDS | 20.0% |
| !! | TCTAAATCAAAATGTTTATC+TGG | - | tig0023910:2142-2161 | None:intergenic | 20.0% |
| !!! | TGATCATTTCTTTATTTTGA+AGG | + | tig0023910:2354-2373 | Msa1412470:CDS | 20.0% |
| !!! | TTACTATATCATTGATTCAT+TGG | + | tig0023910:2390-2409 | Msa1412470:CDS | 20.0% |
| !!! | TACTATATCATTGATTCATT+GGG | + | tig0023910:2391-2410 | Msa1412470:CDS | 20.0% |
| !! | TAAAGATGAAGAAGTTAATA+AGG | + | tig0023910:2492-2511 | Msa1412470:CDS | 20.0% |
| !!! | ATAATCTCTAAACTATGTTT+TGG | + | tig0023910:2867-2886 | Msa1412470:intron | 20.0% |
| !! | TTATTAAGTTACAAAAGCTA+AGG | - | tig0023910:2991-3010 | None:intergenic | 20.0% |
| !! | AATTAATGCATCTCAATATT+TGG | - | tig0023910:3069-3088 | None:intergenic | 20.0% |
| !!! | TTTTCCTGAACAATAATATT+TGG | - | tig0023910:3108-3127 | None:intergenic | 20.0% |
| !!! | AATATTGTAGTTTGATTTTG+CGG | - | tig0023910:3380-3399 | None:intergenic | 20.0% |
| !! | CTTATAAAGTAAAATTTGTG+TGG | + | tig0023910:3496-3515 | Msa1412470:intron | 20.0% |
| !!! | AATAATTAAGGGTATAATAG+TGG | - | tig0023910:3765-3784 | None:intergenic | 20.0% |
| !!! | CTCTTTATTACACTTTTTTT+TGG | - | tig0023910:3991-4010 | None:intergenic | 20.0% |
| !! | TTAAATTAAACAAACCACAA+AGG | - | tig0023910:5796-5815 | None:intergenic | 20.0% |
| !! | TTAATAAACAGAGACAAATA+AGG | - | tig0023910:6554-6573 | None:intergenic | 20.0% |
| !! | GGAAATTATATAGTTATAAG+GGG | + | tig0023910:6675-6694 | Msa1412470:intron | 20.0% |
| !! | GATAGATAAATTTAATACTC+AGG | + | tig0023910:6834-6853 | Msa1412470:intron | 20.0% |
| !!! | AATAGAAGTATAATATGTTC+TGG | + | tig0023910:7061-7080 | Msa1412470:intron | 20.0% |
| !! | GGAAAAATAATACTTTAGTA+TGG | - | tig0023910:7120-7139 | None:intergenic | 20.0% |
| !! | TTAAACTAAATCACAAGTTA+TGG | - | tig0023910:7162-7181 | None:intergenic | 20.0% |
| !!! | TTTTAATTTCAACAAGTCAT+GGG | - | tig0023910:7695-7714 | None:intergenic | 20.0% |
| ! | ATAGCATACAACAACAATAT+AGG | - | tig0023910:285-304 | None:intergenic | 25.0% |
| !!! | GATTTTTAAGATGGATATGA+AGG | - | tig0023910:344-363 | None:intergenic | 25.0% |
| ! | CATATCCATCTTAAAAATCA+TGG | + | tig0023910:345-364 | Msa1412470:intron | 25.0% |
| ! | TTGTGAACATAAATAATAGG+TGG | + | tig0023910:464-483 | Msa1412470:intron | 25.0% |
| !! | ATTTGTTAGTCATCTGTTAT+CGG | - | tig0023910:505-524 | None:intergenic | 25.0% |
| ! | TAAAACTACACAAATCTTAG+TGG | - | tig0023910:633-652 | None:intergenic | 25.0% |
| !! | TTTAATTAATTAACGGGTGT+TGG | - | tig0023910:763-782 | None:intergenic | 25.0% |
| ! | AGTTACAAAGAAACAAAGTA+GGG | - | tig0023910:1282-1301 | None:intergenic | 25.0% |
| ! | TAGTTACAAAGAAACAAAGT+AGG | - | tig0023910:1283-1302 | None:intergenic | 25.0% |
| ! | TATTAGTCCTTTGTCAAAAA+AGG | + | tig0023910:1336-1355 | Msa1412470:intron | 25.0% |
| ! | AAAGTCTATCAAAGATGTAT+TGG | + | tig0023910:1494-1513 | Msa1412470:intron | 25.0% |
| ! | AAGTCTATCAAAGATGTATT+GGG | + | tig0023910:1495-1514 | Msa1412470:intron | 25.0% |
| ! | TAAACATGAGTTCATAAGTA+AGG | + | tig0023910:1609-1628 | Msa1412470:intron | 25.0% |
| !!! | TTTTCTTGATTTAGTTTAGG+GGG | + | tig0023910:1763-1782 | Msa1412470:intron | 25.0% |
| ! | ATTTACTTGAATTTCCTTGA+AGG | - | tig0023910:1868-1887 | None:intergenic | 25.0% |
| ! | TTCAAGGAAATTCAAGTAAA+TGG | + | tig0023910:1867-1886 | Msa1412470:CDS | 25.0% |
| ! | TCAAGGAAATTCAAGTAAAT+GGG | + | tig0023910:1868-1887 | Msa1412470:CDS | 25.0% |
| !! | CTATGTCTTTTGATGAAATA+TGG | + | tig0023910:2260-2279 | Msa1412470:CDS | 25.0% |
| ! | CAACTAACTATGTAAATTCT+TGG | - | tig0023910:2331-2350 | None:intergenic | 25.0% |
| ! | CAAGAATTTACATAGTTAGT+TGG | + | tig0023910:2329-2348 | Msa1412470:CDS | 25.0% |
| !!! | TTTCTTTATTTTGAAGGTAG+AGG | + | tig0023910:2360-2379 | Msa1412470:CDS | 25.0% |
| ! | ATGAAGAAGTTAATAAGGAT+GGG | + | tig0023910:2497-2516 | Msa1412470:CDS | 25.0% |
| ! | AAAACATAGTCACACATTTA+AGG | + | tig0023910:2790-2809 | Msa1412470:intron | 25.0% |
| ! | AAAGCCAAATATTATTGTTC+AGG | + | tig0023910:3101-3120 | Msa1412470:intron | 25.0% |
| ! | ATTCTGTGAAGTTAAATTCA+AGG | + | tig0023910:3186-3205 | Msa1412470:intron | 25.0% |
| ! | AAACCATAGCTTATAATATG+AGG | - | tig0023910:3269-3288 | None:intergenic | 25.0% |
| ! | GAATGTTGAAAAGAAAATGT+TGG | - | tig0023910:3459-3478 | None:intergenic | 25.0% |
| !!! | GAATATTAGCAACTTTTTCT+TGG | - | tig0023910:3586-3605 | None:intergenic | 25.0% |
| ! | CTTATTAAGTAGAAACATCA+TGG | + | tig0023910:3605-3624 | Msa1412470:intron | 25.0% |
| ! | AAGAGACAATTATTATGAGA+CGG | - | tig0023910:3677-3696 | None:intergenic | 25.0% |
| !!! | TTTTTTGACAAACACTCTTT+TGG | + | tig0023910:4052-4071 | Msa1412470:intron | 25.0% |
| ! | AGATATCATTTCTAATGACA+TGG | - | tig0023910:4115-4134 | None:intergenic | 25.0% |
| ! | CTGATACATAAAATTTGTGA+TGG | - | tig0023910:4613-4632 | None:intergenic | 25.0% |
| ! | ATCAGGTATAATACAATCTT+CGG | - | tig0023910:5841-5860 | None:intergenic | 25.0% |
| !! | GATTCATGTTTATCCTTTTT+CGG | + | tig0023910:6398-6417 | Msa1412470:intron | 25.0% |
| !! | ATTCATGTTTATCCTTTTTC+GGG | + | tig0023910:6399-6418 | Msa1412470:intron | 25.0% |
| ! | GAGAAATCAACTATTTGTTT+AGG | - | tig0023910:6523-6542 | None:intergenic | 25.0% |
| !! | ACAAATAGTTGATTTCTCAA+AGG | + | tig0023910:6525-6544 | Msa1412470:intron | 25.0% |
| ! | AGATATAAGTCTTCTTCAAA+GGG | - | tig0023910:6589-6608 | None:intergenic | 25.0% |
| ! | TAGATATAAGTCTTCTTCAA+AGG | - | tig0023910:6590-6609 | None:intergenic | 25.0% |
| !! | ATCTTATACTCTTTTTGCAA+TGG | + | tig0023910:6787-6806 | Msa1412470:intron | 25.0% |
| ! | AAATTTAATACTCAGGCATA+AGG | + | tig0023910:6841-6860 | Msa1412470:intron | 25.0% |
| ! | ATAGTAAAGTCAACAATGAA+GGG | - | tig0023910:7001-7020 | None:intergenic | 25.0% |
| ! | AATAGTAAAGTCAACAATGA+AGG | - | tig0023910:7002-7021 | None:intergenic | 25.0% |
| !!! | TTCATTGTTGACTTTACTAT+TGG | + | tig0023910:7001-7020 | Msa1412470:intron | 25.0% |
| !! | TTTTAATGATTTCAGAGAAC+AGG | + | tig0023910:7315-7334 | Msa1412470:intron | 25.0% |
| ! | TTTAATGATTTCAGAGAACA+GGG | + | tig0023910:7316-7335 | Msa1412470:intron | 25.0% |
| !! | TTATGAAAGTATGTATGAAG+AGG | + | tig0023910:7584-7603 | Msa1412470:intron | 25.0% |
| !! | TATGAAAGTATGTATGAAGA+GGG | + | tig0023910:7585-7604 | Msa1412470:intron | 25.0% |
| !!! | GTTTTAATTTCAACAAGTCA+TGG | - | tig0023910:7696-7715 | None:intergenic | 25.0% |
| ! | ATGTTTAAATAGAGACTTCA+AGG | + | tig0023910:7803-7822 | Msa1412470:intron | 25.0% |
| !! | CTCAACCATGATTTTTAAGA+TGG | - | tig0023910:353-372 | None:intergenic | 30.0% |
| CAAATCAAGCAGAATAATGT+TGG | - | tig0023910:447-466 | None:intergenic | 30.0% | |
| TTTGTTAGTCATCTGTTATC+GGG | - | tig0023910:504-523 | None:intergenic | 30.0% | |
| ATCAATTGTTTGCAAAAGCA+AGG | + | tig0023910:731-750 | Msa1412470:intron | 30.0% | |
| GGTGAGTAATACTTTATTAC+AGG | + | tig0023910:801-820 | Msa1412470:intron | 30.0% | |
| CTTTATTACAGGTTTGTCTA+AGG | + | tig0023910:812-831 | Msa1412470:intron | 30.0% | |
| ! | AGCAATAACCTTTGAAAACA+CGG | + | tig0023910:870-889 | Msa1412470:CDS | 30.0% |
| GTAAAGTCAGATAAGAAACA+CGG | + | tig0023910:892-911 | Msa1412470:CDS | 30.0% | |
| TAAAGTCAGATAAGAAACAC+GGG | + | tig0023910:893-912 | Msa1412470:CDS | 30.0% | |
| AACAATGTGAAGTTTGATGA+AGG | + | tig0023910:958-977 | Msa1412470:CDS | 30.0% | |
| CAAGTTTGGATATCAATAGA+AGG | + | tig0023910:1127-1146 | Msa1412470:CDS | 30.0% | |
| GATATCAATAGAAGGTTCAA+GGG | + | tig0023910:1135-1154 | Msa1412470:CDS | 30.0% | |
| ATATCAATAGAAGGTTCAAG+GGG | + | tig0023910:1136-1155 | Msa1412470:CDS | 30.0% | |
| TGTAGAAGTTTCTAATTGAG+CGG | - | tig0023910:1181-1200 | None:intergenic | 30.0% | |
| !!! | CTAATAGCCTTTTTTGACAA+AGG | - | tig0023910:1346-1365 | None:intergenic | 30.0% |
| ACAAATTATTGTATGGCTTG+AGG | + | tig0023910:1548-1567 | Msa1412470:intron | 30.0% | |
| CAAATTATTGTATGGCTTGA+GGG | + | tig0023910:1549-1568 | Msa1412470:intron | 30.0% | |
| AAGTGCATGTTAGAAATTGA+TGG | + | tig0023910:1797-1816 | Msa1412470:intron | 30.0% | |
| TTGTCAAATTGAGTTCTTGT+TGG | - | tig0023910:2052-2071 | None:intergenic | 30.0% | |
| AACAACTAAAGGTCTCAAAT+TGG | - | tig0023910:2179-2198 | None:intergenic | 30.0% | |
| AAACAACAACAACAACAACA+AGG | + | tig0023910:2291-2310 | Msa1412470:CDS | 30.0% | |
| ATGATTCATGTGTGATGTAT+GGG | + | tig0023910:2461-2480 | Msa1412470:CDS | 30.0% | |
| GATGAAGAAGTTAATAAGGA+TGG | + | tig0023910:2496-2515 | Msa1412470:CDS | 30.0% | |
| TGAAGAAGTTAATAAGGATG+GGG | + | tig0023910:2498-2517 | Msa1412470:CDS | 30.0% | |
| TTTCAAATCCTTATCTTCAC+CGG | + | tig0023910:2659-2678 | Msa1412470:CDS | 30.0% | |
| GAAATACAACATAGAAGATG+TGG | - | tig0023910:2728-2747 | None:intergenic | 30.0% | |
| CTTAACAAATGAACATCTAC+AGG | + | tig0023910:2747-2766 | Msa1412470:intron | 30.0% | |
| !! | ATTTAAGGAATTTTGACCGT+TGG | + | tig0023910:2805-2824 | Msa1412470:intron | 30.0% |
| GTTATTCAATCTTCATCCAA+CGG | - | tig0023910:2824-2843 | None:intergenic | 30.0% | |
| AGTAGCTAATCAATGAAGAT+TGG | - | tig0023910:2907-2926 | None:intergenic | 30.0% | |
| ! | TAGAAGTGTATTTCTTTCTG+AGG | + | tig0023910:3018-3037 | Msa1412470:intron | 30.0% |
| !!! | TCACATGTTTTAATCGCAAT+TGG | + | tig0023910:3235-3254 | Msa1412470:intron | 30.0% |
| CTACCTCATATTATAAGCTA+TGG | + | tig0023910:3263-3282 | Msa1412470:intron | 30.0% | |
| ! | TGGGTCTCATACTTTAAAAA+TGG | + | tig0023910:3516-3535 | Msa1412470:intron | 30.0% |
| ! | GGGTCTCATACTTTAAAAAT+GGG | + | tig0023910:3517-3536 | Msa1412470:intron | 30.0% |
| ! | AAAATGGGTTCCATGTAAAA+TGG | + | tig0023910:3532-3551 | Msa1412470:intron | 30.0% |
| ! | GTATATCTGACCATTTTACA+TGG | - | tig0023910:3545-3564 | None:intergenic | 30.0% |
| GTAAAATGGTCAGATATACT+TGG | + | tig0023910:3546-3565 | Msa1412470:intron | 30.0% | |
| ACTCCACTAACTAAAATCAT+TGG | + | tig0023910:3805-3824 | Msa1412470:intron | 30.0% | |
| !!! | ACTCCAATGATTTTAGTTAG+TGG | - | tig0023910:3811-3830 | None:intergenic | 30.0% |
| ATGTTTGTGCACGATAATTA+AGG | - | tig0023910:3872-3891 | None:intergenic | 30.0% | |
| ATTAAACGAGTTTGATACCA+AGG | + | tig0023910:3890-3909 | Msa1412470:intron | 30.0% | |
| TTAAACGAGTTTGATACCAA+GGG | + | tig0023910:3891-3910 | Msa1412470:intron | 30.0% | |
| ATTCTACTAATTTACTCCCT+TGG | - | tig0023910:3910-3929 | None:intergenic | 30.0% | |
| AGTTATGTAACTTAGTGAGT+GGG | - | tig0023910:4287-4306 | None:intergenic | 30.0% | |
| AAGTTATGTAACTTAGTGAG+TGG | - | tig0023910:4288-4307 | None:intergenic | 30.0% | |
| ! | TTCTCTCTTTTGTATGAGTT+TGG | + | tig0023910:4448-4467 | Msa1412470:intron | 30.0% |
| ! | TGTGCTGAAACATAACATTT+TGG | + | tig0023910:4647-4666 | Msa1412470:intron | 30.0% |
| TGAAAGCAAAACAGAATACA+CGG | - | tig0023910:4931-4950 | None:intergenic | 30.0% | |
| AGAATGCTAATAGGCAATTT+AGG | - | tig0023910:5104-5123 | None:intergenic | 30.0% | |
| CTGAAATTTGAGAACAACAA+GGG | - | tig0023910:5138-5157 | None:intergenic | 30.0% | |
| !!! | TCAAGATTTCATGTTGCTTT+TGG | + | tig0023910:5241-5260 | Msa1412470:intron | 30.0% |
| GCTTGTAATTCTTCAAGAAT+TGG | - | tig0023910:5275-5294 | None:intergenic | 30.0% | |
| GAATTACAAGCACATCATAT+AGG | + | tig0023910:5284-5303 | Msa1412470:intron | 30.0% | |
| !!! | TTATTGTCATTTTCCGTTGA+CGG | + | tig0023910:5397-5416 | Msa1412470:intron | 30.0% |
| !! | TTTCCATCTGTGTTTTTACA+TGG | - | tig0023910:5490-5509 | None:intergenic | 30.0% |
| ATGTAAAAACACAGATGGAA+AGG | + | tig0023910:5489-5508 | Msa1412470:intron | 30.0% | |
| ATCGAAAATACACAACAATC+AGG | - | tig0023910:5525-5544 | None:intergenic | 30.0% | |
| AAGGGGAAATTATCAAAACA+AGG | - | tig0023910:5552-5571 | None:intergenic | 30.0% | |
| AGACAAACACTCAGAAATAA+GGG | - | tig0023910:5570-5589 | None:intergenic | 30.0% | |
| AAGACAAACACTCAGAAATA+AGG | - | tig0023910:5571-5590 | None:intergenic | 30.0% | |
| CAAATGGGTCAAATTATGAA+AGG | - | tig0023910:5639-5658 | None:intergenic | 30.0% | |
| AAACTAAACAAACCTCACTA+AGG | - | tig0023910:5739-5758 | None:intergenic | 30.0% | |
| ! | TAGTGAGGTTTGTTTAGTTT+AGG | + | tig0023910:5739-5758 | Msa1412470:intron | 30.0% |
| ! | AGTGAGGTTTGTTTAGTTTA+GGG | + | tig0023910:5740-5759 | Msa1412470:intron | 30.0% |
| ! | TCAAAAGAGTACAAGTTCTA+AGG | - | tig0023910:5917-5936 | None:intergenic | 30.0% |
| ! | TTAGAACTTGTACTCTTTTG+AGG | + | tig0023910:5916-5935 | Msa1412470:intron | 30.0% |
| ! | TTTTGCAAACCATGACAATT+CGG | + | tig0023910:5997-6016 | Msa1412470:intron | 30.0% |
| AGAGTATAAGATGTGAAGAA+CGG | - | tig0023910:6779-6798 | None:intergenic | 30.0% | |
| !! | TTGTTGACTTTACTATTGGT+TGG | + | tig0023910:7005-7024 | Msa1412470:intron | 30.0% |
| !! | GTATAATATGTTCTGGTTTG+TGG | + | tig0023910:7068-7087 | Msa1412470:intron | 30.0% |
| ! | TTCCACAGCTGAAATTTTTA+TGG | + | tig0023910:7230-7249 | Msa1412470:intron | 30.0% |
| AACCATAAAAATTTCAGCTG+TGG | - | tig0023910:7235-7254 | None:intergenic | 30.0% | |
| ! | GCTGAAATTTTTATGGTTCT+TGG | + | tig0023910:7237-7256 | Msa1412470:intron | 30.0% |
| GAAGACATGAAATTTCTACT+TGG | + | tig0023910:7272-7291 | Msa1412470:intron | 30.0% | |
| ! | TTTTCTCGTATCAACAGTTT+AGG | + | tig0023910:7424-7443 | Msa1412470:intron | 30.0% |
| TTTCTCGTATCAACAGTTTA+GGG | + | tig0023910:7425-7444 | Msa1412470:intron | 30.0% | |
| ! | TTTTTGTTGAGAGAGTAGTT+TGG | + | tig0023910:7473-7492 | Msa1412470:intron | 30.0% |
| ! | TTTTGTTGAGAGAGTAGTTT+GGG | + | tig0023910:7474-7493 | Msa1412470:intron | 30.0% |
| TTGTTATATGAGAAGTAAGC+TGG | + | tig0023910:7552-7571 | Msa1412470:intron | 30.0% | |
| ! | ATGAAAGTATGTATGAAGAG+GGG | + | tig0023910:7586-7605 | Msa1412470:intron | 30.0% |
| AAAACCATGTTGCACTTATT+AGG | + | tig0023910:7711-7730 | Msa1412470:intron | 30.0% | |
| ATTTCCTAATAAGTGCAACA+TGG | - | tig0023910:7718-7737 | None:intergenic | 30.0% | |
| ATGTTGCACTTATTAGGAAA+TGG | + | tig0023910:7717-7736 | Msa1412470:intron | 30.0% | |
| CTTCCTTTGAACATTGGATT+CGG | - | tig0023910:38-57 | None:intergenic | 35.0% | |
| TTCAAAGGAAGCTTCCTATA+CGG | + | tig0023910:47-66 | Msa1412470:CDS | 35.0% | |
| !!! | GAGGTATTGCCTTCTATTTT+TGG | - | tig0023910:215-234 | None:intergenic | 35.0% |
| AAACATGGCATGTGTAATAG+AGG | - | tig0023910:234-253 | None:intergenic | 35.0% | |
| ! | TGAAGGGGTGTATTTATAAG+TGG | - | tig0023910:421-440 | None:intergenic | 35.0% |
| AGAATAATGTTGGTCGTGAA+GGG | - | tig0023910:437-456 | None:intergenic | 35.0% | |
| AATAATAGGTGGTCTGATAG+CGG | + | tig0023910:475-494 | Msa1412470:intron | 35.0% | |
| AATTGTTTGCAAAAGCAAGG+TGG | + | tig0023910:734-753 | Msa1412470:intron | 35.0% | |
| ! | TGACTTTACCGTGTTTTCAA+AGG | - | tig0023910:881-900 | None:intergenic | 35.0% |
| AAACACGGGACTATAGAAAA+AGG | + | tig0023910:907-926 | Msa1412470:CDS | 35.0% | |
| AACACGGGACTATAGAAAAA+GGG | + | tig0023910:908-927 | Msa1412470:CDS | 35.0% | |
| AACATCCATATGAGTCAGAT+GGG | + | tig0023910:989-1008 | Msa1412470:CDS | 35.0% | |
| AAAGTAACTCTTGACTCTGT+GGG | - | tig0023910:1087-1106 | None:intergenic | 35.0% | |
| AAAAGTAACTCTTGACTCTG+TGG | - | tig0023910:1088-1107 | None:intergenic | 35.0% | |
| !!! | AGAGTTACTTTTCCAAGTTC+AGG | + | tig0023910:1096-1115 | Msa1412470:CDS | 35.0% |
| !!! | GAGTTACTTTTCCAAGTTCA+GGG | + | tig0023910:1097-1116 | Msa1412470:CDS | 35.0% |
| GGATATCAATAGAAGGTTCA+AGG | + | tig0023910:1134-1153 | Msa1412470:CDS | 35.0% | |
| AATCCATCAAACTCCTTTCA+CGG | + | tig0023910:1200-1219 | Msa1412470:CDS | 35.0% | |
| TAGAATTGACATACCGTGAA+AGG | - | tig0023910:1216-1235 | None:intergenic | 35.0% | |
| TCGCGCTACAAATTATTGTA+TGG | + | tig0023910:1541-1560 | Msa1412470:intron | 35.0% | |
| TCTGATTTCTGCAAAATGAG+AGG | - | tig0023910:1824-1843 | None:intergenic | 35.0% | |
| !! | TCTCTAAGATCAAACCTTCA+AGG | + | tig0023910:1851-1870 | Msa1412470:CDS | 35.0% |
| !!! | CGTTAGTTTTGAGCTTTGAT+TGG | - | tig0023910:1922-1941 | None:intergenic | 35.0% |
| ! | CTTTTCACTTCGTTGATCAA+AGG | - | tig0023910:1957-1976 | None:intergenic | 35.0% |
| CTTTGATCAACGAAGTGAAA+AGG | + | tig0023910:1955-1974 | Msa1412470:CDS | 35.0% | |
| TAGTTGCACTAATATCTCAC+TGG | + | tig0023910:2005-2024 | Msa1412470:CDS | 35.0% | |
| AAACCTGTGTATGATTTCTG+AGG | - | tig0023910:2205-2224 | None:intergenic | 35.0% | |
| TAAGCAATGAAACTTCTCAG+GGG | - | tig0023910:2233-2252 | None:intergenic | 35.0% | |
| CTAAGCAATGAAACTTCTCA+GGG | - | tig0023910:2234-2253 | None:intergenic | 35.0% | |
| TCTAAGCAATGAAACTTCTC+AGG | - | tig0023910:2235-2254 | None:intergenic | 35.0% | |
| GAGAAGTTTCATTGCTTAGA+AGG | + | tig0023910:2235-2254 | Msa1412470:CDS | 35.0% | |
| !!! | ACTTTTTGAAGGGTGTCAAA+GGG | + | tig0023910:2420-2439 | Msa1412470:CDS | 35.0% |
| GATGATTCATGTGTGATGTA+TGG | + | tig0023910:2460-2479 | Msa1412470:CDS | 35.0% | |
| GAAGAAGTTAATAAGGATGG+GGG | + | tig0023910:2499-2518 | Msa1412470:CDS | 35.0% | |
| AGTTAGACAACTTGAGAAAG+AGG | + | tig0023910:2621-2640 | Msa1412470:CDS | 35.0% | |
| TTGAGAAAGAGGAGAAGAAA+TGG | + | tig0023910:2632-2651 | Msa1412470:CDS | 35.0% | |
| GAAAATCAATCTGCAATTGC+CGG | - | tig0023910:2681-2700 | None:intergenic | 35.0% | |
| GACAATTATTATGAGACGGA+TGG | - | tig0023910:3673-3692 | None:intergenic | 35.0% | |
| GAATTGGGTAGTACAGTAAA+TGG | + | tig0023910:4149-4168 | Msa1412470:intron | 35.0% | |
| AGATAGCAACTCACAAAACA+TGG | + | tig0023910:4178-4197 | Msa1412470:intron | 35.0% | |
| CAATGCGAAGAAGAGTAATA+GGG | + | tig0023910:4202-4221 | Msa1412470:intron | 35.0% | |
| !! | GTAATAGGGTTTTCTGAAAG+AGG | + | tig0023910:4216-4235 | Msa1412470:intron | 35.0% |
| ! | TTTCTGAAAGAGGAAGAGAT+TGG | + | tig0023910:4226-4245 | Msa1412470:intron | 35.0% |
| ACCATTTCTCTCTCTTTCAT+TGG | + | tig0023910:4338-4357 | Msa1412470:intron | 35.0% | |
| TCCAATGAAAGAGAGAGAAA+TGG | - | tig0023910:4342-4361 | None:intergenic | 35.0% | |
| TGATAGGATCAGCAATTTAC+CGG | + | tig0023910:4743-4762 | Msa1412470:intron | 35.0% | |
| ! | TCCATCAAAAGTTTTTGCCT+TGG | + | tig0023910:4957-4976 | Msa1412470:intron | 35.0% |
| ! | CCATCAAAAGTTTTTGCCTT+GGG | + | tig0023910:4958-4977 | Msa1412470:intron | 35.0% |
| ! | TTTTGCCTTGGGATTACATA+TGG | + | tig0023910:4969-4988 | Msa1412470:intron | 35.0% |
| GCTGAAATTTGAGAACAACA+AGG | - | tig0023910:5139-5158 | None:intergenic | 35.0% | |
| !!! | GATTTCATGTTGCTTTTGGT+TGG | + | tig0023910:5245-5264 | Msa1412470:intron | 35.0% |
| TCATATAGGTTTCAGATCTG+AGG | + | tig0023910:5298-5317 | Msa1412470:intron | 35.0% | |
| TTGCCATGTAAAAACACAGA+TGG | + | tig0023910:5484-5503 | Msa1412470:intron | 35.0% | |
| GACAAACACTCAGAAATAAG+GGG | - | tig0023910:5569-5588 | None:intergenic | 35.0% | |
| TGGGTCAAATTATGAAAGGT+GGG | - | tig0023910:5635-5654 | None:intergenic | 35.0% | |
| ATGGGTCAAATTATGAAAGG+TGG | - | tig0023910:5636-5655 | None:intergenic | 35.0% | |
| TTCTCTCTCTCAACTATAAC+TGG | + | tig0023910:5663-5682 | Msa1412470:intron | 35.0% | |
| !!! | GGTCAAGTTTTTGAAGCTTT+GGG | - | tig0023910:5718-5737 | None:intergenic | 35.0% |
| !!! | AGGTCAAGTTTTTGAAGCTT+TGG | - | tig0023910:5719-5738 | None:intergenic | 35.0% |
| TCAAAAACTTGACCTTAGTG+AGG | + | tig0023910:5724-5743 | Msa1412470:intron | 35.0% | |
| TATTTCCTAACATGCCTTTG+TGG | + | tig0023910:5779-5798 | Msa1412470:intron | 35.0% | |
| AGGTATAATACAATCTTCGG+TGG | - | tig0023910:5838-5857 | None:intergenic | 35.0% | |
| TTGTATTATACCTGATGTCC+TGG | + | tig0023910:5845-5864 | Msa1412470:intron | 35.0% | |
| AGGTTTAATGAAATGCAGTG+TGG | - | tig0023910:5897-5916 | None:intergenic | 35.0% | |
| !!! | TGTACTCTTTTGAGGTTCAA+AGG | + | tig0023910:5924-5943 | Msa1412470:intron | 35.0% |
| CATAAAGTTCATGACCACAA+CGG | - | tig0023910:6290-6309 | None:intergenic | 35.0% | |
| TTATGTCAGTGCACAAGTTT+AGG | + | tig0023910:6305-6324 | Msa1412470:intron | 35.0% | |
| CATAAACAAGTCGAAGAAAC+AGG | - | tig0023910:6364-6383 | None:intergenic | 35.0% | |
| TGATTTGATGCATAACCTCA+TGG | + | tig0023910:6440-6459 | Msa1412470:intron | 35.0% | |
| TTCTCTTTGACACAGTAGTA+TGG | + | tig0023910:6491-6510 | Msa1412470:intron | 35.0% | |
| TAATACTCAGGCATAAGGTA+AGG | + | tig0023910:6846-6865 | Msa1412470:intron | 35.0% | |
| CACATGATGAGACTGTTTAA+GGG | + | tig0023910:6885-6904 | Msa1412470:intron | 35.0% | |
| ACATGATGAGACTGTTTAAG+GGG | + | tig0023910:6886-6905 | Msa1412470:intron | 35.0% | |
| GTCTAATATCCCAAGAGATA+AGG | + | tig0023910:6908-6927 | Msa1412470:intron | 35.0% | |
| !! | AAGGGATTGATTTGTTCTTG+TGG | + | tig0023910:6953-6972 | Msa1412470:intron | 35.0% |
| TTTGTTCTTGTGGTACTGTT+AGG | + | tig0023910:6963-6982 | Msa1412470:intron | 35.0% | |
| ! | TGACTTTACTATTGGTTGGT+TGG | + | tig0023910:7009-7028 | Msa1412470:intron | 35.0% |
| ! | TTTACTATTGGTTGGTTGGT+TGG | + | tig0023910:7013-7032 | Msa1412470:intron | 35.0% |
| !! | TGTTCTGGTTTGTGGTAAAA+TGG | + | tig0023910:7076-7095 | Msa1412470:intron | 35.0% |
| TTCTTCCTGTCTTGATAAAC+AGG | + | tig0023910:7184-7203 | Msa1412470:intron | 35.0% | |
| TGTCTTGATAAACAGGAAGT+CGG | + | tig0023910:7191-7210 | Msa1412470:intron | 35.0% | |
| TTCTCGTATCAACAGTTTAG+GGG | + | tig0023910:7426-7445 | Msa1412470:intron | 35.0% | |
| GTAGTTGATCATGTTTCAGT+AGG | + | tig0023910:7896-7915 | Msa1412470:intron | 35.0% | |
| ! | CAAAGGTGAGGTAAATTTTG+TGG | + | tig0023910:8231-8250 | Msa1412470:CDS | 35.0% |
| !! | AATTTTGTGGTAGTTTGTCG+CGG | + | tig0023910:8244-8263 | Msa1412470:CDS | 35.0% |
| AGTTAGACAGCTAAAGAAAG+AGG | + | tig0023910:8315-8334 | Msa1412470:CDS | 35.0% | |
| TAAAGAAAGAGGAGCAGAAA+TGG | + | tig0023910:8326-8345 | Msa1412470:CDS | 35.0% | |
| AGACCGAATCCAATGTTCAA+AGG | + | tig0023910:32-51 | Msa1412470:CDS | 40.0% | |
| AGGAAGCTTCCTTTGAACAT+TGG | - | tig0023910:44-63 | None:intergenic | 40.0% | |
| ! | AATCATCGAAGCTACCCTTT+TGG | + | tig0023910:87-106 | Msa1412470:CDS | 40.0% |
| AAGAATGGAGCGTACCAAAA+GGG | - | tig0023910:104-123 | None:intergenic | 40.0% | |
| AAAGAATGGAGCGTACCAAA+AGG | - | tig0023910:105-124 | None:intergenic | 40.0% | |
| GTGAAGTGAGCTTGTGAAAT+GGG | - | tig0023910:189-208 | None:intergenic | 40.0% | |
| CTTCACGCACCAAAAATAGA+AGG | + | tig0023910:203-222 | Msa1412470:intron | 40.0% | |
| ! | CGTTTTTGTGAGGTAGTGTT+AGG | - | tig0023910:376-395 | None:intergenic | 40.0% |
| GAATAATGTTGGTCGTGAAG+GGG | - | tig0023910:436-455 | None:intergenic | 40.0% | |
| CAGAATAATGTTGGTCGTGA+AGG | - | tig0023910:438-457 | None:intergenic | 40.0% | |
| ! | GTCTAAGGTTATTGAAGCAC+AGG | + | tig0023910:827-846 | Msa1412470:CDS | 40.0% |
| CAACATCCATATGAGTCAGA+TGG | + | tig0023910:988-1007 | Msa1412470:CDS | 40.0% | |
| ACTCATCAGAGTCAAACACA+GGG | - | tig0023910:1017-1036 | None:intergenic | 40.0% | |
| AAGTAACTCTTGACTCTGTG+GGG | - | tig0023910:1086-1105 | None:intergenic | 40.0% | |
| TTCAGGGACAAAGACAAGTT+TGG | + | tig0023910:1113-1132 | Msa1412470:CDS | 40.0% | |
| ATACCGTGAAAGGAGTTTGA+TGG | - | tig0023910:1206-1225 | None:intergenic | 40.0% | |
| !! | CACTGGCTTCATACAAATCA+AGG | + | tig0023910:2022-2041 | Msa1412470:CDS | 40.0% |
| TTTGACAACCTCATCACACA+AGG | + | tig0023910:2064-2083 | Msa1412470:CDS | 40.0% | |
| TCACACAAGGTTCATCTGAA+TGG | + | tig0023910:2077-2096 | Msa1412470:CDS | 40.0% | |
| !! | TTCTGAGGCAGAACAACTAA+AGG | - | tig0023910:2190-2209 | None:intergenic | 40.0% |
| CAACAACAACAACAACAAGG+TGG | + | tig0023910:2294-2313 | Msa1412470:CDS | 40.0% | |
| ! | TTGGGTGAGAGACTTTTTGA+AGG | + | tig0023910:2409-2428 | Msa1412470:CDS | 40.0% |
| ! | TGGGTGAGAGACTTTTTGAA+GGG | + | tig0023910:2410-2429 | Msa1412470:CDS | 40.0% |
| !!! | GACTTTTTGAAGGGTGTCAA+AGG | + | tig0023910:2419-2438 | Msa1412470:CDS | 40.0% |
| !!! | AGGTGACGAAAGTTTTGAGA+TGG | + | tig0023910:2540-2559 | Msa1412470:CDS | 40.0% |
| !!! | AGTTTTGAGATGGTTTGTCG+TGG | + | tig0023910:2550-2569 | Msa1412470:CDS | 40.0% |
| GAAGATGTGGAAGAGGATAA+AGG | - | tig0023910:2715-2734 | None:intergenic | 40.0% | |
| CAACATAGAAGATGTGGAAG+AGG | - | tig0023910:2722-2741 | None:intergenic | 40.0% | |
| ! | TATGTTTTTCCTAGTCCCAG+TGG | - | tig0023910:2778-2797 | None:intergenic | 40.0% |
| TACAGTCAAGTAGACGAAGA+GGG | + | tig0023910:3430-3449 | Msa1412470:intron | 40.0% | |
| GGTCAGATATACTTGGATGT+TGG | + | tig0023910:3553-3572 | Msa1412470:intron | 40.0% | |
| CGGATGGAGTATATGAAAGA+TGG | - | tig0023910:3657-3676 | None:intergenic | 40.0% | |
| CCTATTACTCTTCTTCGCAT+TGG | - | tig0023910:4204-4223 | None:intergenic | 40.0% | |
| CCAATGCGAAGAAGAGTAAT+AGG | + | tig0023910:4201-4220 | Msa1412470:intron | 40.0% | |
| ATGTAACTTAGTGAGTGGGT+TGG | - | tig0023910:4283-4302 | None:intergenic | 40.0% | |
| GGAATCAACTGTTTCCTTTG+TGG | + | tig0023910:4359-4378 | Msa1412470:intron | 40.0% | |
| !! | GAATGTTGTTTCGACCACAA+AGG | - | tig0023910:4376-4395 | None:intergenic | 40.0% |
| !! | ACTGGTTTGAGCTAAGTTAG+AGG | - | tig0023910:4482-4501 | None:intergenic | 40.0% |
| CCTATCATCATCGTCGTTAT+CGG | - | tig0023910:4730-4749 | None:intergenic | 40.0% | |
| ATATGACAGATGAGAGTCTC+CGG | - | tig0023910:4765-4784 | None:intergenic | 40.0% | |
| CAAAGAGGTGGATACATCTA+TGG | + | tig0023910:4832-4851 | Msa1412470:intron | 40.0% | |
| ! | CCCAAGGCAAAAACTTTTGA+TGG | - | tig0023910:4961-4980 | None:intergenic | 40.0% |
| GTCAACCATGTTGTACAAAG+CGG | + | tig0023910:5032-5051 | Msa1412470:intron | 40.0% | |
| AGTATCCACAAGGAGATCAA+TGG | - | tig0023910:5066-5085 | None:intergenic | 40.0% | |
| CTCCTTGTGGATACTATGTT+TGG | + | tig0023910:5071-5090 | Msa1412470:intron | 40.0% | |
| CACCAAACATAGTATCCACA+AGG | - | tig0023910:5076-5095 | None:intergenic | 40.0% | |
| CTTGTGGATACTATGTTTGG+TGG | + | tig0023910:5074-5093 | Msa1412470:intron | 40.0% | |
| TTGCAGCTGAGAATGCTAAT+AGG | - | tig0023910:5113-5132 | None:intergenic | 40.0% | |
| ATTTCAGCGTTTCTCTGTGA+AGG | + | tig0023910:5151-5170 | Msa1412470:intron | 40.0% | |
| TTTCAGCGTTTCTCTGTGAA+GGG | + | tig0023910:5152-5171 | Msa1412470:intron | 40.0% | |
| !!! | AGATGAAGGATTTTGAGGCA+GGG | - | tig0023910:5197-5216 | None:intergenic | 40.0% |
| AAAGCAAACCATATCTGCTC+TGG | - | tig0023910:5378-5397 | None:intergenic | 40.0% | |
| GGAGTTTCTCTGCATACAAA+TGG | + | tig0023910:5433-5452 | Msa1412470:intron | 40.0% | |
| ! | ACAAACCACAAAGGCATGTT+AGG | - | tig0023910:5787-5806 | None:intergenic | 40.0% |
| TACCTGATGTCCTGGAAAAT+TGG | + | tig0023910:5853-5872 | Msa1412470:intron | 40.0% | |
| ACCTGATGTCCTGGAAAATT+GGG | + | tig0023910:5854-5873 | Msa1412470:intron | 40.0% | |
| TGCAGTGTGGAACAAACTTT+GGG | - | tig0023910:5884-5903 | None:intergenic | 40.0% | |
| ATGCAGTGTGGAACAAACTT+TGG | - | tig0023910:5885-5904 | None:intergenic | 40.0% | |
| AGAAGATAATCACAAGGCGA+AGG | - | tig0023910:6027-6046 | None:intergenic | 40.0% | |
| GGAGGAAGAAGATAATCACA+AGG | - | tig0023910:6033-6052 | None:intergenic | 40.0% | |
| TGTGATTATCTTCTTCCTCC+TGG | + | tig0023910:6033-6052 | Msa1412470:intron | 40.0% | |
| GTGATTATCTTCTTCCTCCT+GGG | + | tig0023910:6034-6053 | Msa1412470:intron | 40.0% | |
| TGAAAATCGACACGTAGCAT+GGG | - | tig0023910:6060-6079 | None:intergenic | 40.0% | |
| AGAATTATCCTCGTTCCCAA+GGG | + | tig0023910:6092-6111 | Msa1412470:intron | 40.0% | |
| TGAAAGTTGACATGTAGCAG+AGG | - | tig0023910:6118-6137 | None:intergenic | 40.0% | |
| GGCTTTCTCGAGAATAGTTA+AGG | + | tig0023910:6212-6231 | Msa1412470:intron | 40.0% | |
| CGAACTGACAAACATAAGAG+AGG | - | tig0023910:6257-6276 | None:intergenic | 40.0% | |
| TTCGTTAACTTCTACCGTTG+TGG | + | tig0023910:6273-6292 | Msa1412470:intron | 40.0% | |
| !!! | CATGTTTATCCTTTTTCGGG+TGG | + | tig0023910:6402-6421 | Msa1412470:intron | 40.0% |
| AACATACAACCACCCGAAAA+AGG | - | tig0023910:6414-6433 | None:intergenic | 40.0% | |
| CACTAAGCTGTCAAGCTTTA+TGG | + | tig0023910:6654-6673 | Msa1412470:intron | 40.0% | |
| GTTATAAGGGGTAGTTCACT+AGG | + | tig0023910:6687-6706 | Msa1412470:intron | 40.0% | |
| CCTTAAACAGTCTCATCATG+TGG | - | tig0023910:6887-6906 | None:intergenic | 40.0% | |
| CCACATGATGAGACTGTTTA+AGG | + | tig0023910:6884-6903 | Msa1412470:intron | 40.0% | |
| !! | ATACCATGGCCTTATCTCTT+GGG | - | tig0023910:6920-6939 | None:intergenic | 40.0% |
| !! | AATACCATGGCCTTATCTCT+TGG | - | tig0023910:6921-6940 | None:intergenic | 40.0% |
| AACAAATCAATCCCTTCACC+AGG | - | tig0023910:6949-6968 | None:intergenic | 40.0% | |
| CTAAATCACAAGTTATGGCC+TGG | - | tig0023910:7157-7176 | None:intergenic | 40.0% | |
| GACTTCCTGTTTATCAAGAC+AGG | - | tig0023910:7192-7211 | None:intergenic | 40.0% | |
| TGAGATGCAGTGTATCATCT+GGG | + | tig0023910:7352-7371 | Msa1412470:intron | 40.0% | |
| AGTGTATCATCTGGGCTTAA+TGG | + | tig0023910:7360-7379 | Msa1412470:intron | 40.0% | |
| AATGGAATGCTATGTTCCAG+TGG | + | tig0023910:7378-7397 | Msa1412470:intron | 40.0% | |
| ATCAACAGTTTAGGGGAGTA+TGG | + | tig0023910:7433-7452 | Msa1412470:intron | 40.0% | |
| TACATACACACAGCTTGAGA+GGG | - | tig0023910:7523-7542 | None:intergenic | 40.0% | |
| AGCATGCTGCAAAATCTATC+TGG | - | tig0023910:7630-7649 | None:intergenic | 40.0% | |
| ATGGATATGCTGTCATGATG+TGG | + | tig0023910:7736-7755 | Msa1412470:intron | 40.0% | |
| ATAACACATTCAGCCCTCAA+AGG | + | tig0023910:8075-8094 | Msa1412470:intron | 40.0% | |
| TATGAGCCAAGAAGTTGACA+AGG | + | tig0023910:8199-8218 | Msa1412470:intron | 40.0% | |
| GAAGCTTCCTATACGGTTGA+AGG | + | tig0023910:54-73 | Msa1412470:CDS | 45.0% | |
| CCATTGACCTTCAACCGTAT+AGG | - | tig0023910:64-83 | None:intergenic | 45.0% | |
| CCTATACGGTTGAAGGTCAA+TGG | + | tig0023910:61-80 | Msa1412470:CDS | 45.0% | |
| CGTGAAGTGAGCTTGTGAAA+TGG | - | tig0023910:190-209 | None:intergenic | 45.0% | |
| !!! | CCTCACAAGTCGTTTTTGTG+AGG | - | tig0023910:386-405 | None:intergenic | 45.0% |
| CCTCACAAAAACGACTTGTG+AGG | + | tig0023910:383-402 | Msa1412470:intron | 45.0% | |
| CTCATCAGAGTCAAACACAG+GGG | - | tig0023910:1016-1035 | None:intergenic | 45.0% | |
| GACTCATCAGAGTCAAACAC+AGG | - | tig0023910:1018-1037 | None:intergenic | 45.0% | |
| TCGAACGAATCCACAACAAG+CGG | + | tig0023910:1039-1058 | Msa1412470:CDS | 45.0% | |
| CTTGTCTTTGTCCCTGAACT+TGG | - | tig0023910:1111-1130 | None:intergenic | 45.0% | |
| TCAATAGAAGGTTCAAGGGG+TGG | + | tig0023910:1139-1158 | Msa1412470:CDS | 45.0% | |
| CAATAGAAGGTTCAAGGGGT+GGG | + | tig0023910:1140-1159 | Msa1412470:CDS | 45.0% | |
| !! | CAACGAAGTGAAAAGGCATC+TGG | + | tig0023910:1962-1981 | Msa1412470:CDS | 45.0% |
| CAGATGAACCTTGTGTGATG+AGG | - | tig0023910:2075-2094 | None:intergenic | 45.0% | |
| CTGCCTCAGAAATCATACAC+AGG | + | tig0023910:2199-2218 | Msa1412470:CDS | 45.0% | |
| GGTGCAAAGAGTAGTTCAAG+AGG | + | tig0023910:2520-2539 | Msa1412470:CDS | 45.0% | |
| TGCAATTGCCGGTGAAGATA+AGG | - | tig0023910:2670-2689 | None:intergenic | 45.0% | |
| ! | TTTTCCTAGTCCCAGTGGTT+AGG | - | tig0023910:2773-2792 | None:intergenic | 45.0% |
| CTACAGTCAAGTAGACGAAG+AGG | + | tig0023910:3429-3448 | Msa1412470:intron | 45.0% | |
| TGACGCAGATCTCGAGAATT+GGG | + | tig0023910:4134-4153 | Msa1412470:intron | 45.0% | |
| !! | CTTAGTGAGTGGGTTGGTTA+AGG | - | tig0023910:4277-4296 | None:intergenic | 45.0% |
| CCGATAACGACGATGATGAT+AGG | + | tig0023910:4727-4746 | Msa1412470:intron | 45.0% | |
| ! | TGGCAACAGCTTGTTTGGTA+GGG | - | tig0023910:4800-4819 | None:intergenic | 45.0% |
| ! | ACTAGTGGCAACAGCTTGTT+TGG | - | tig0023910:4805-4824 | None:intergenic | 45.0% |
| GATGTATCCACCTCTTTGCA+AGG | - | tig0023910:4830-4849 | None:intergenic | 45.0% | |
| TGAAGCGAAAACAGGCTTCT+TGG | - | tig0023910:4902-4921 | None:intergenic | 45.0% | |
| CCTCACCATATGTAATCCCA+AGG | - | tig0023910:4977-4996 | None:intergenic | 45.0% | |
| CCTTGGGATTACATATGGTG+AGG | + | tig0023910:4974-4993 | Msa1412470:intron | 45.0% | |
| TGGGATTACATATGGTGAGG+AGG | + | tig0023910:4977-4996 | Msa1412470:intron | 45.0% | |
| GGGATTACATATGGTGAGGA+GGG | + | tig0023910:4978-4997 | Msa1412470:intron | 45.0% | |
| CTTTCCCCATGTCGTCAAAT+GGG | + | tig0023910:5010-5029 | Msa1412470:intron | 45.0% | |
| TTGACCCATTTGACGACATG+GGG | - | tig0023910:5017-5036 | None:intergenic | 45.0% | |
| GTTGACCCATTTGACGACAT+GGG | - | tig0023910:5018-5037 | None:intergenic | 45.0% | |
| CAACACCGCTTTGTACAACA+TGG | - | tig0023910:5040-5059 | None:intergenic | 45.0% | |
| TGAGACCATTGATCTCCTTG+TGG | + | tig0023910:5058-5077 | Msa1412470:intron | 45.0% | |
| ! | GTGGATACTATGTTTGGTGG+TGG | + | tig0023910:5077-5096 | Msa1412470:intron | 45.0% |
| ! | TTTGAGGCAGGGAAGTCTAA+TGG | - | tig0023910:5186-5205 | None:intergenic | 45.0% |
| !!! | GAGATGAAGGATTTTGAGGC+AGG | - | tig0023910:5198-5217 | None:intergenic | 45.0% |
| ! | CGCTGAGATGAAGGATTTTG+AGG | - | tig0023910:5202-5221 | None:intergenic | 45.0% |
| ATCCTTCATCTCAGCGAATC+TGG | + | tig0023910:5206-5225 | Msa1412470:intron | 45.0% | |
| TCCTTCATCTCAGCGAATCT+GGG | + | tig0023910:5207-5226 | Msa1412470:intron | 45.0% | |
| ! | CAAGTTGACCAGAGCAGATA+TGG | + | tig0023910:5367-5386 | Msa1412470:intron | 45.0% |
| !! | ACATTACGAAGTGCCGTCAA+CGG | - | tig0023910:5413-5432 | None:intergenic | 45.0% |
| TCTCTGCATACAAATGGACG+AGG | + | tig0023910:5439-5458 | Msa1412470:intron | 45.0% | |
| AGGTGGGAATCTCATCATGA+GGG | - | tig0023910:5619-5638 | None:intergenic | 45.0% | |
| AAGGTGGGAATCTCATCATG+AGG | - | tig0023910:5620-5639 | None:intergenic | 45.0% | |
| !! | GAGAGAGAGAAGCGTCAAAT+GGG | - | tig0023910:5654-5673 | None:intergenic | 45.0% |
| !! | TGAGAGAGAGAAGCGTCAAA+TGG | - | tig0023910:5655-5674 | None:intergenic | 45.0% |
| ! | ACCCAATTTTCCAGGACATC+AGG | - | tig0023910:5858-5877 | None:intergenic | 45.0% |
| ! | TTGGGTCAACCCAATTTTCC+AGG | - | tig0023910:5866-5885 | None:intergenic | 45.0% |
| TGCAAACCATGACAATTCGG+TGG | + | tig0023910:6000-6019 | Msa1412470:intron | 45.0% | |
| CTGAAAATCGACACGTAGCA+TGG | - | tig0023910:6061-6080 | None:intergenic | 45.0% | |
| GAGAATTATCCTCGTTCCCA+AGG | + | tig0023910:6091-6110 | Msa1412470:intron | 45.0% | |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | tig0023910:6186-6205 | Msa1412470:intron | 45.0% |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | tig0023910:6187-6206 | Msa1412470:intron | 45.0% |
| ACTTTCACACTCAAGCCATG+AGG | - | tig0023910:6458-6477 | None:intergenic | 45.0% | |
| TATCCCAAGAGATAAGGCCA+TGG | + | tig0023910:6914-6933 | Msa1412470:intron | 45.0% | |
| TCACCAGGATGCTAATACCA+TGG | - | tig0023910:6934-6953 | None:intergenic | 45.0% | |
| TGGTATTAGCATCCTGGTGA+AGG | + | tig0023910:6934-6953 | Msa1412470:intron | 45.0% | |
| GGTATTAGCATCCTGGTGAA+GGG | + | tig0023910:6935-6954 | Msa1412470:intron | 45.0% | |
| TTGTGGTACTGTTAGGACGA+TGG | + | tig0023910:6970-6989 | Msa1412470:intron | 45.0% | |
| CTTGATAAACAGGAAGTCGG+TGG | + | tig0023910:7194-7213 | Msa1412470:intron | 45.0% | |
| GTGAGATGCAGTGTATCATC+TGG | + | tig0023910:7351-7370 | Msa1412470:intron | 45.0% | |
| CTACTTGAACATAGCACCAC+TGG | - | tig0023910:7397-7416 | None:intergenic | 45.0% | |
| CTACATACACACAGCTTGAG+AGG | - | tig0023910:7524-7543 | None:intergenic | 45.0% | |
| CGTGGAATGATCTCCTTTGA+GGG | - | tig0023910:8091-8110 | None:intergenic | 45.0% | |
| CATTCCACGCACTCTTCTTT+AGG | + | tig0023910:8102-8121 | Msa1412470:intron | 45.0% | |
| ! | ACTACCTAAAGAAGAGTGCG+TGG | - | tig0023910:8109-8128 | None:intergenic | 45.0% |
| AGCCAAGAAGTTGACAAGGA+TGG | + | tig0023910:8203-8222 | Msa1412470:intron | 45.0% | |
| CTCCATCCTTGTCAACTTCT+TGG | - | tig0023910:8208-8227 | None:intergenic | 45.0% | |
| CAAGAAGTTGACAAGGATGG+AGG | + | tig0023910:8206-8225 | Msa1412470:intron | 45.0% | |
| AGAAAGAGGAGCAGAAATGG+AGG | + | tig0023910:8329-8348 | Msa1412470:CDS | 45.0% | |
| !! | TAATTATTTAATTAATTAAC+GGG | - | tig0023910:769-788 | None:intergenic | 5.0% |
| !! | AAATAGTAATATTATTAAAT+TGG | - | tig0023910:1735-1754 | None:intergenic | 5.0% |
| !!! | TATTAATTCTTTTTTTTTTA+AGG | - | tig0023910:3937-3956 | None:intergenic | 5.0% |
| !!! | TTAATTTTATCATTATTAAT+AGG | + | tig0023910:5812-5831 | Msa1412470:intron | 5.0% |
| AACGAATCCACAACAAGCGG+TGG | + | tig0023910:1042-1061 | Msa1412470:CDS | 50.0% | |
| ACATCTACAGGCCTAACCAC+TGG | + | tig0023910:2759-2778 | Msa1412470:intron | 50.0% | |
| CATCTACAGGCCTAACCACT+GGG | + | tig0023910:2760-2779 | Msa1412470:intron | 50.0% | |
| CTGACGCAGATCTCGAGAAT+TGG | + | tig0023910:4133-4152 | Msa1412470:intron | 50.0% | |
| ! | GTGGCAACAGCTTGTTTGGT+AGG | - | tig0023910:4801-4820 | None:intergenic | 50.0% |
| CCTCTTTGCAAGGACACTAG+TGG | - | tig0023910:4820-4839 | None:intergenic | 50.0% | |
| CCACTAGTGTCCTTGCAAAG+AGG | + | tig0023910:4817-4836 | Msa1412470:intron | 50.0% | |
| CTAGTGTCCTTGCAAAGAGG+TGG | + | tig0023910:4820-4839 | Msa1412470:intron | 50.0% | |
| GCTTTCCCCATGTCGTCAAA+TGG | + | tig0023910:5009-5028 | Msa1412470:intron | 50.0% | |
| GGTTGACCCATTTGACGACA+TGG | - | tig0023910:5019-5038 | None:intergenic | 50.0% | |
| ACCCAGATTCGCTGAGATGA+AGG | - | tig0023910:5211-5230 | None:intergenic | 50.0% | |
| GTTGACGGCACTTCGTAATG+TGG | + | tig0023910:5412-5431 | Msa1412470:intron | 50.0% | |
| TTGAGGTTCAAAGGCCTGCA+AGG | + | tig0023910:5933-5952 | Msa1412470:intron | 50.0% | |
| GAAGGTCCACCGAATTGTCA+TGG | - | tig0023910:6009-6028 | None:intergenic | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | - | tig0023910:6188-6207 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | tig0023910:6185-6204 | Msa1412470:intron | 50.0% |
| CTTATCCCACTAAGTGGGGT+CGG | + | tig0023910:6191-6210 | Msa1412470:intron | 50.0% | |
| AACAGTCTCATCATGTGGCG+TGG | - | tig0023910:6882-6901 | None:intergenic | 50.0% | |
| AGGCCATGGTATTAGCATCC+TGG | + | tig0023910:6928-6947 | Msa1412470:intron | 50.0% | |
| GCGTGGAATGATCTCCTTTG+AGG | - | tig0023910:8092-8111 | None:intergenic | 50.0% | |
| ! | TGACAAGGATGGAGGTGCAA+AGG | + | tig0023910:8214-8233 | Msa1412470:intron | 50.0% |
| GGGGACCCATCTGACTCATA+TGG | - | tig0023910:997-1016 | None:intergenic | 55.0% | |
| ! | TGAACTGCCACCGCTTGTTG+TGG | - | tig0023910:1052-1071 | None:intergenic | 55.0% |
| GGACTCGCTGAAGCGAAAAC+AGG | - | tig0023910:4910-4929 | None:intergenic | 55.0% | |
| CCATCAGAAGCTCACCTTGC+AGG | - | tig0023910:5950-5969 | None:intergenic | 55.0% | |
| CCTGCAAGGTGAGCTTCTGA+TGG | + | tig0023910:5947-5966 | Msa1412470:intron | 55.0% | |
| GACATGTAGCAGAGGCCCTT+GGG | - | tig0023910:6110-6129 | None:intergenic | 55.0% | |
| TGACATGTAGCAGAGGCCCT+TGG | - | tig0023910:6111-6130 | None:intergenic | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | tig0023910:6193-6212 | None:intergenic | 55.0% | |
| GAAAGCCGACCCCACTTAGT+GGG | - | tig0023910:6199-6218 | None:intergenic | 55.0% | |
| AGAAAGCCGACCCCACTTAG+TGG | - | tig0023910:6200-6219 | None:intergenic | 55.0% | |
| ATCCTTAAGATTCGCCGCCC+TGG | + | tig0023910:6335-6354 | Msa1412470:intron | 55.0% | |
| GTCGAAGAAACAGGCTGCCA+GGG | - | tig0023910:6355-6374 | None:intergenic | 55.0% | |
| AGTCGAAGAAACAGGCTGCC+AGG | - | tig0023910:6356-6375 | None:intergenic | 55.0% | |
| CTCAGGCATAAGGTAAGGCC+AGG | + | tig0023910:6851-6870 | Msa1412470:intron | 55.0% | |
| ! | AGGATGGAGGTGCAAAGGTG+AGG | + | tig0023910:8219-8238 | Msa1412470:intron | 55.0% |
| CAGGCCTAACCACTGGGACT+AGG | + | tig0023910:2766-2785 | Msa1412470:intron | 60.0% | |
| TGCCAGGGCGGCGAATCTTA+AGG | - | tig0023910:6340-6359 | None:intergenic | 60.0% | |
| GAAGAAACAGGCTGCCAGGG+CGG | - | tig0023910:6352-6371 | None:intergenic | 60.0% | |
| TCTCATCATGTGGCGTGGCG+TGG | - | tig0023910:6877-6896 | None:intergenic | 60.0% | |
| ACACGTAGCATGGGCCCAGG+AGG | - | tig0023910:6051-6070 | None:intergenic | 65.0% | |
| TCGACACGTAGCATGGGCCC+AGG | - | tig0023910:6054-6073 | None:intergenic | 65.0% | |
| AGCAGAGGCCCTTGGGAACG+AGG | - | tig0023910:6103-6122 | None:intergenic | 65.0% | |
| TTCCTGTCTGCGCAGCAGCC+AGG | + | tig0023910:7136-7155 | Msa1412470:intron | 65.0% | |
| !! | CACAGCTTGAGAGGGCGTCG+TGG | - | tig0023910:7515-7534 | None:intergenic | 65.0% |
| TCATGTGGCGTGGCGTGGCC+TGG | - | tig0023910:6872-6891 | None:intergenic | 70.0% | |
| GGCCTGGCTGCTGCGCAGAC+AGG | - | tig0023910:7141-7160 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0023910 | gene | 4 | 8372 | 4 | ID=Msa1412470;Name=Msa1412470 |
| tig0023910 | mRNA | 4 | 8372 | 4 | ID=Msa1412470-mRNA-1;Parent=Msa1412470;Name=Msa1412470-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0.33|0|1|0.66|0.75|4|0|508 |
| tig0023910 | exon | 4 | 108 | 4 | ID=Msa1412470-mRNA-1:exon:20639;Parent=Msa1412470-mRNA-1 |
| tig0023910 | exon | 823 | 1221 | 823 | ID=Msa1412470-mRNA-1:exon:20640;Parent=Msa1412470-mRNA-1 |
| tig0023910 | exon | 1836 | 2706 | 1836 | ID=Msa1412470-mRNA-1:exon:20641;Parent=Msa1412470-mRNA-1 |
| tig0023910 | exon | 8221 | 8372 | 8221 | ID=Msa1412470-mRNA-1:exon:20642;Parent=Msa1412470-mRNA-1 |
| tig0023910 | CDS | 4 | 108 | 4 | ID=Msa1412470-mRNA-1:cds;Parent=Msa1412470-mRNA-1 |
| tig0023910 | CDS | 823 | 1221 | 823 | ID=Msa1412470-mRNA-1:cds;Parent=Msa1412470-mRNA-1 |
| tig0023910 | CDS | 1836 | 2706 | 1836 | ID=Msa1412470-mRNA-1:cds;Parent=Msa1412470-mRNA-1 |
| tig0023910 | CDS | 8221 | 8372 | 8221 | ID=Msa1412470-mRNA-1:cds;Parent=Msa1412470-mRNA-1 |
| Gene Sequence |
| Protein sequence |
