Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0382480 | XP_003603391.1 | 92.193 | 602 | 38 | 5 | 1 | 598 | 1 | 597 | 0.0 | 1056 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0382480 | G7JB14 | 92.193 | 602 | 38 | 5 | 1 | 598 | 1 | 597 | 0.0 | 1056 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0033140 | Msa0382480 | 0.801812 | 7.546197e-49 | -8.615850e-47 |
| Msa0162680 | Msa0382480 | 0.803243 | 3.826310e-49 | -8.615850e-47 |
| Msa0382480 | Msa0402800 | 0.816656 | 4.941288e-52 | -8.615850e-47 |
| Msa0382480 | Msa0427560 | 0.815537 | 8.787286e-52 | -8.615850e-47 |
| Msa0382480 | Msa0432660 | 0.840356 | 9.136368e-58 | -8.615850e-47 |
| Msa0382480 | Msa0481770 | 0.819626 | 1.052092e-52 | -8.615850e-47 |
| Msa0382480 | Msa0497860 | 0.812733 | 3.654709e-51 | -8.615850e-47 |
| Msa0382480 | Msa0521380 | 0.926853 | 2.646714e-91 | -8.615850e-47 |
| Msa0382480 | Msa0660650 | 0.813002 | 3.190245e-51 | -8.615850e-47 |
| Msa0382480 | Msa1412470 | 0.864169 | 1.475202e-64 | -8.615850e-47 |
| Msa0382480 | Msa1453600 | 0.812657 | 3.797074e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0382480 | MtrunA17_Chr3g0137731 | 92.193 | 602 | 38 | 5 | 1 | 598 | 1 | 597 | 0.0 | 1056 |
| Msa0382480 | MtrunA17_Chr1g0176961 | 50.479 | 313 | 114 | 5 | 324 | 598 | 419 | 728 | 2.45e-98 | 317 |
| Msa0382480 | MtrunA17_Chr7g0267631 | 48.366 | 306 | 123 | 6 | 324 | 598 | 408 | 709 | 4.16e-85 | 282 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0382480 | AT2G25460.2 | 37.794 | 553 | 258 | 17 | 65 | 597 | 52 | 538 | 3.94e-97 | 309 |
| Msa0382480 | AT3G11760.1 | 51.748 | 286 | 118 | 4 | 324 | 598 | 417 | 693 | 5.58e-94 | 305 |
| Msa0382480 | AT5G04860.2 | 46.957 | 345 | 147 | 8 | 285 | 598 | 236 | 575 | 6.87e-90 | 292 |
| Msa0382480 | AT5G04860.1 | 46.957 | 345 | 147 | 8 | 285 | 598 | 387 | 726 | 4.00e-88 | 291 |
| Msa0382480 | AT2G25460.1 | 34.541 | 414 | 206 | 14 | 65 | 459 | 52 | 419 | 3.67e-53 | 188 |
| Msa0382480 | AT2G10560.1 | 44.053 | 227 | 97 | 7 | 397 | 598 | 1 | 222 | 3.46e-51 | 179 |
Find 123 sgRNAs with CRISPR-Local
Find 532 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAAGGAAATTCAAGTAAA+TGG | 0.143807 | 3_1:-85106923 | Msa0382480:CDS |
| GTCCTAACTCAAGCTTTAAT+TGG | 0.206060 | 3_1:+85109219 | None:intergenic |
| CAACTAACTATGTAAATTCT+TGG | 0.246132 | 3_1:+85106456 | None:intergenic |
| AAACACGGGACTATAGAAAA+AGG | 0.282626 | 3_1:-85107902 | Msa0382480:CDS |
| CTTGTCTTTGTCCCTGAACT+TGG | 0.295468 | 3_1:+85107701 | None:intergenic |
| TCTAAATCAAAATGTTTATC+TGG | 0.298751 | 3_1:+85106651 | None:intergenic |
| GGAAAACTCCTTCTCACGTT+TGG | 0.315799 | 3_1:-85109022 | Msa0382480:CDS |
| TAAAGATGAAGAAGTTAATA+AGG | 0.320412 | 3_1:-85106292 | Msa0382480:CDS |
| TTACTATATCATTGATTCAT+TGG | 0.323701 | 3_1:-85106394 | Msa0382480:CDS |
| GAGAAGTTTCATTGCTTAGA+AGG | 0.338959 | 3_1:-85106555 | Msa0382480:CDS |
| CTTTATTACAGGTTTGTCTA+AGG | 0.339470 | 3_1:-85107997 | Msa0382480:intron |
| TTGGTATACCTTGATTTGTA+TGG | 0.347267 | 3_1:+85106760 | None:intergenic |
| TTGAGAAAGAGGAGAAGAAA+TGG | 0.356522 | 3_1:-85106152 | Msa0382480:CDS |
| TACTATATCATTGATTCATT+GGG | 0.366292 | 3_1:-85106393 | Msa0382480:CDS |
| GAAAACTCCTTCTCACGTTT+GGG | 0.368015 | 3_1:-85109021 | Msa0382480:CDS |
| TTCAGGGACAAAGACAAGTT+TGG | 0.368520 | 3_1:-85107696 | Msa0382480:CDS |
| AATCATCGAAGCTACCCTTT+TGG | 0.370953 | 3_1:-85108702 | Msa0382480:intron |
| AACAACTAAAGGTCTCAAAT+TGG | 0.378951 | 3_1:+85106614 | None:intergenic |
| TTCAAAGGAAGCTTCCTATA+CGG | 0.379927 | 3_1:-85108742 | Msa0382480:CDS |
| CTTAATCCATGTTATTTCAA+TGG | 0.385132 | 3_1:+85109154 | None:intergenic |
| TGCCGTAGATTCGTCGCTGC+CGG | 0.386738 | 3_1:-85109044 | Msa0382480:CDS |
| CAAGAATTTACATAGTTAGT+TGG | 0.387389 | 3_1:-85106455 | Msa0382480:CDS |
| GACCTCTGTGTCTTCAACCT+TGG | 0.397971 | 3_1:-85108990 | Msa0382480:CDS |
| CTTCCTTTGAACATTGGATT+CGG | 0.408918 | 3_1:+85108754 | None:intergenic |
| TCTCTAAGATCAAACCTTCA+AGG | 0.409683 | 3_1:-85106939 | Msa0382480:CDS |
| ATTTACTTGAATTTCCTTGA+AGG | 0.411143 | 3_1:+85106925 | None:intergenic |
| GATGATTCATGTGTGATGTA+TGG | 0.412386 | 3_1:-85106324 | Msa0382480:CDS |
| TCTAAGCAATGAAACTTCTC+AGG | 0.424509 | 3_1:+85106558 | None:intergenic |
| TGTGTATAGGGACAGGGTGG+TGG | 0.426747 | 3_1:-85108848 | Msa0382480:intron |
| GGAAGAACCAAAAGGTAAAA+TGG | 0.433515 | 3_1:-85108825 | Msa0382480:CDS |
| CAAGTTTGGATATCAATAGA+AGG | 0.433928 | 3_1:-85107682 | Msa0382480:CDS |
| AACCAATTAAAGCTTGAGTT+AGG | 0.434343 | 3_1:-85109221 | Msa0382480:CDS |
| GATGAAGAAGTTAATAAGGA+TGG | 0.435976 | 3_1:-85106288 | Msa0382480:CDS |
| TCAAGGAAATTCAAGTAAAT+GGG | 0.436962 | 3_1:-85106922 | Msa0382480:CDS |
| AATCCATCAAACTCCTTTCA+CGG | 0.437364 | 3_1:-85107609 | Msa0382480:intron |
| GTCTAAGGTTATTGAAGCAC+AGG | 0.440478 | 3_1:-85107982 | Msa0382480:CDS |
| CCTATACGGTTGAAGGTCAA+TGG | 0.445443 | 3_1:-85108728 | Msa0382480:CDS |
| ATACCGTGAAAGGAGTTTGA+TGG | 0.448932 | 3_1:+85107606 | None:intergenic |
| GGGGACCCATCTGACTCATA+TGG | 0.466820 | 3_1:+85107815 | None:intergenic |
| GAAAATCAATCTGCAATTGC+CGG | 0.467500 | 3_1:+85106106 | None:intergenic |
| AGTTAGACAACTTGAGAAAG+AGG | 0.469446 | 3_1:-85106163 | Msa0382480:CDS |
| TAAAGAAAGAGGAGCAGAAA+TGG | 0.471519 | 3_1:-85100460 | Msa0382480:CDS |
| GAAGCTTCCTATACGGTTGA+AGG | 0.474253 | 3_1:-85108735 | Msa0382480:CDS |
| GTGTATAGGGACAGGGTGGT+GGG | 0.476052 | 3_1:-85108847 | Msa0382480:intron |
| CACTGGCTCCATACAAATCA+AGG | 0.476684 | 3_1:-85106768 | Msa0382480:CDS |
| GGATATCAATAGAAGGTTCA+AGG | 0.483015 | 3_1:-85107675 | Msa0382480:CDS |
| TCACACAAGGTTCATCTGAA+TGG | 0.483310 | 3_1:-85106713 | Msa0382480:CDS |
| CCATTGACCTTCAACCGTAT+AGG | 0.487380 | 3_1:+85108728 | None:intergenic |
| AGGAAGCTTCCTTTGAACAT+TGG | 0.488002 | 3_1:+85108748 | None:intergenic |
| AAAGTAACTCTTGACTCTGT+GGG | 0.490195 | 3_1:+85107725 | None:intergenic |
| GCCGTAGATTCGTCGCTGCC+GGG | 0.491896 | 3_1:-85109043 | Msa0382480:CDS |
| TTGTCAAATTGAGTTCTTGT+TGG | 0.492779 | 3_1:+85106741 | None:intergenic |
| TGCAATTGCCGGTGAAGATA+AGG | 0.492998 | 3_1:+85106117 | None:intergenic |
| CTTTGATCAACGAAGTGAAA+AGG | 0.494079 | 3_1:-85106835 | Msa0382480:CDS |
| GGCAGACATGTTTGAGTCCA+AGG | 0.501776 | 3_1:+85108973 | None:intergenic |
| TTTCAAATCCTTATCTTCAC+CGG | 0.501952 | 3_1:-85106125 | Msa0382480:CDS |
| ATGAAGAAGTTAATAAGGAT+GGG | 0.505362 | 3_1:-85106287 | Msa0382480:CDS |
| TCCCGGCAGCGACGAATCTA+CGG | 0.508314 | 3_1:+85109042 | None:intergenic |
| TTCTGAGGCAGAACAACTAA+AGG | 0.508890 | 3_1:+85106603 | None:intergenic |
| TGAACTGCCACCGCTTGTTG+TGG | 0.511778 | 3_1:+85107760 | None:intergenic |
| TGTATAGGGACAGGGTGGTG+GGG | 0.520486 | 3_1:-85108846 | Msa0382480:intron |
| AGTTAGACAGCTAAAGAAAG+AGG | 0.520997 | 3_1:-85100471 | Msa0382480:CDS |
| GATATCAATAGAAGGTTCAA+GGG | 0.528253 | 3_1:-85107674 | Msa0382480:CDS |
| GCAGGGAGTGATATGACTGC+AGG | 0.531153 | 3_1:+85109064 | None:intergenic |
| GGCAGCGACGAATCTACGGC+AGG | 0.532444 | 3_1:+85109046 | None:intergenic |
| ATGATTCATGTGTGATGTAT+GGG | 0.535106 | 3_1:-85106323 | Msa0382480:CDS |
| TAGAATTGACATACCGTGAA+AGG | 0.538980 | 3_1:+85107596 | None:intergenic |
| CAACATCCATATGAGTCAGA+TGG | 0.542549 | 3_1:-85107821 | Msa0382480:CDS |
| AATTAGCCATTGAAATAACA+TGG | 0.543511 | 3_1:-85109160 | Msa0382480:CDS |
| CAACGAAGTGAAAAGGCCTC+TGG | 0.548675 | 3_1:-85106828 | Msa0382480:CDS |
| AAGAATGGAGCGTACCAAAA+GGG | 0.552626 | 3_1:+85108688 | None:intergenic |
| TGAAGAAGTTAATAAGGATG+GGG | 0.560236 | 3_1:-85106286 | Msa0382480:CDS |
| AACAATGTGAAGTTTGATGA+AGG | 0.564539 | 3_1:-85107851 | Msa0382480:CDS |
| CAATAGAAGGTTCAAGGGGT+GGG | 0.566587 | 3_1:-85107669 | Msa0382480:CDS |
| AGCAATAACCTTTGAAAACA+CGG | 0.571826 | 3_1:-85107939 | Msa0382480:CDS |
| AACATCCATATGAGTCAGAT+GGG | 0.577022 | 3_1:-85107820 | Msa0382480:CDS |
| TCAATAGAAGGTTCAAGGGG+TGG | 0.579144 | 3_1:-85107670 | Msa0382480:CDS |
| TGATTGTCCCAAACGTGAGA+AGG | 0.581864 | 3_1:+85109014 | None:intergenic |
| TAGTTGCACTAATATCTCAC+TGG | 0.582311 | 3_1:-85106785 | Msa0382480:CDS |
| ACCAAAAGGTAAAATGGTGG+TGG | 0.584450 | 3_1:-85108819 | Msa0382480:CDS |
| CTAAGCAATGAAACTTCTCA+GGG | 0.586124 | 3_1:+85106559 | None:intergenic |
| TGTAGAAGTTTCTAATTGAG+CGG | 0.593072 | 3_1:+85107631 | None:intergenic |
| TGACAAGGATGGAGGTGCAA+AGG | 0.597160 | 3_1:-85100572 | Msa0382480:intron |
| AGACCGAATCCAATGTTCAA+AGG | 0.597972 | 3_1:-85108757 | Msa0382480:CDS |
| AGTTTGTATGACTCTAGCGA+TGG | 0.605787 | 3_1:-85108789 | Msa0382480:CDS |
| TTGTATGACTCTAGCGATGG+AGG | 0.606457 | 3_1:-85108786 | Msa0382480:CDS |
| AGAAAGAGGAGCAGAAATGG+AGG | 0.610337 | 3_1:-85100457 | Msa0382480:CDS |
| AAAGGTAAAATGGTGGTGGT+CGG | 0.616409 | 3_1:-85108815 | Msa0382480:CDS |
| GACTCATCAGAGTCAAACAC+AGG | 0.617667 | 3_1:+85107794 | None:intergenic |
| GGTGGTGGGGAAGAACCAAA+AGG | 0.617941 | 3_1:-85108833 | Msa0382480:CDS |
| AAAAGTAACTCTTGACTCTG+TGG | 0.625814 | 3_1:+85107724 | None:intergenic |
| GAAGAAGTTAATAAGGATGG+GGG | 0.628518 | 3_1:-85106285 | Msa0382480:CDS |
| CAAGAAGTTGACAAGGATGG+AGG | 0.628997 | 3_1:-85100580 | Msa0382480:intron |
| AAACCTGTGTATGATTTCTG+AGG | 0.630083 | 3_1:+85106588 | None:intergenic |
| AAGCAACAAGCACACAGTGA+AGG | 0.638338 | 3_1:-85109246 | Msa0382480:CDS |
| GTTTACAGTAGTTGCCACGT+TGG | 0.640878 | 3_1:+85109187 | None:intergenic |
| CAGATGAACCTTGTGTGATG+AGG | 0.645553 | 3_1:+85106718 | None:intergenic |
| TTTGACAACCTCATCACACA+AGG | 0.646349 | 3_1:-85106726 | Msa0382480:CDS |
| AGGATGGAGGTGCAAAGGTG+AGG | 0.647236 | 3_1:-85100567 | Msa0382480:CDS |
| CAGGGAGTGATATGACTGCA+GGG | 0.648373 | 3_1:+85109065 | None:intergenic |
| GCAGCGACGAATCTACGGCA+GGG | 0.650761 | 3_1:+85109047 | None:intergenic |
| GATGATGAAGAAGTGGTGGT+TGG | 0.653699 | 3_1:-85109279 | Msa0382480:CDS |
| TGGCGATGATGATGAAGAAG+TGG | 0.658060 | 3_1:-85109286 | Msa0382480:CDS |
| AACGAATCCACAACAAGCGG+TGG | 0.661870 | 3_1:-85107767 | Msa0382480:CDS |
| GGTGCAAAGAGTAGTTCAAG+AGG | 0.665895 | 3_1:-85106264 | Msa0382480:CDS |
| CTGCCTCAGAAATCATACAC+AGG | 0.669234 | 3_1:-85106591 | Msa0382480:CDS |
| CGATGATGATGAAGAAGTGG+TGG | 0.671516 | 3_1:-85109283 | Msa0382480:CDS |
| TAAAGTCAGATAAGAAACAC+GGG | 0.683630 | 3_1:-85107916 | Msa0382480:CDS |
| AAGTAACTCTTGACTCTGTG+GGG | 0.684551 | 3_1:+85107726 | None:intergenic |
| TCGAACGAATCCACAACAAG+CGG | 0.686566 | 3_1:-85107770 | Msa0382480:CDS |
| TGTGCATGCACTCTCACCAG+AGG | 0.687640 | 3_1:+85106812 | None:intergenic |
| ACTCATCAGAGTCAAACACA+GGG | 0.693622 | 3_1:+85107795 | None:intergenic |
| ATATCAATAGAAGGTTCAAG+GGG | 0.705222 | 3_1:-85107673 | Msa0382480:CDS |
| GTAAAGTCAGATAAGAAACA+CGG | 0.708686 | 3_1:-85107917 | Msa0382480:CDS |
| AGAACCAAAAGGTAAAATGG+TGG | 0.711514 | 3_1:-85108822 | Msa0382480:CDS |
| ACTATGTGTGTATAGGGACA+GGG | 0.728676 | 3_1:-85108854 | Msa0382480:intron |
| ATGTGTGTATAGGGACAGGG+TGG | 0.746193 | 3_1:-85108851 | Msa0382480:intron |
| TAAGCAATGAAACTTCTCAG+GGG | 0.754329 | 3_1:+85106560 | None:intergenic |
| ATAAGACATTAAATGTGACG+TGG | 0.758337 | 3_1:+85108952 | None:intergenic |
| GTCCAAGGTTGAAGACACAG+AGG | 0.758408 | 3_1:+85108988 | None:intergenic |
| CAACAACAACAAGAACAAGG+TGG | 0.761901 | 3_1:-85106490 | Msa0382480:CDS |
| GGAGTGATATGACTGCAGGG+TGG | 0.776711 | 3_1:+85109068 | None:intergenic |
| CTCATCAGAGTCAAACACAG+GGG | 0.787704 | 3_1:+85107796 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATTATTTAATTAATTAA+CGG | + | chr3_1:85101684-85101703 | None:intergenic | 0.0% |
| !! | TTAATTATTATTATTATTTA+TGG | - | chr3_1:85105338-85105357 | Msa0382480:intron | 0.0% |
| !!! | AAATAATTAATTTTTAACGA+AGG | - | chr3_1:85101694-85101713 | Msa0382480:intron | 10.0% |
| !! | TTTAAAAAATTCAATATTCA+AGG | + | chr3_1:85102319-85102338 | None:intergenic | 10.0% |
| !! | TGATGAAATTTAATAATTAA+GGG | + | chr3_1:85104715-85104734 | None:intergenic | 10.0% |
| !! | TTGATGAAATTTAATAATTA+AGG | + | chr3_1:85104716-85104735 | None:intergenic | 10.0% |
| !! | TAAAAAAAAATTAATCTAAC+TGG | + | chr3_1:85105438-85105457 | None:intergenic | 10.0% |
| !!! | AATATTTAATTTATTTGACA+TGG | - | chr3_1:85107555-85107574 | Msa0382480:intron | 10.0% |
| !!! | ATATTTAATTTATTTGACAT+GGG | - | chr3_1:85107556-85107575 | Msa0382480:intron | 10.0% |
| !! | GAAATCATTAAAAAAAAAAA+AGG | + | chr3_1:85108240-85108259 | None:intergenic | 10.0% |
| !!! | AAATAGTTTTCTTCAAAAAA+AGG | + | chr3_1:85102294-85102313 | None:intergenic | 15.0% |
| !!! | AATTATTTCTTTATCATTAG+CGG | - | chr3_1:85102357-85102376 | Msa0382480:intron | 15.0% |
| !!! | AAATTTTCTTGATTTAGTTT+AGG | - | chr3_1:85102692-85102711 | Msa0382480:intron | 15.0% |
| !!! | AATTTTCTTGATTTAGTTTA+GGG | - | chr3_1:85102693-85102712 | Msa0382480:intron | 15.0% |
| !!! | GATTTTTCACTTATATATAA+TGG | - | chr3_1:85103903-85103922 | Msa0382480:intron | 15.0% |
| !! | TTATAAAGTAAAATTTGTGT+GGG | - | chr3_1:85104436-85104455 | Msa0382480:intron | 15.0% |
| !!! | TTAGATTTACTATTCATTTT+TGG | - | chr3_1:85105482-85105501 | Msa0382480:intron | 15.0% |
| !! | ATGGAAATTATATAGTTATA+AGG | - | chr3_1:85107604-85107623 | Msa0382480:intron | 15.0% |
| !! | TGGAAATTATATAGTTATAA+GGG | - | chr3_1:85107605-85107624 | Msa0382480:intron | 15.0% |
| !! | TATTAAATTTATCTATCAAG+TGG | + | chr3_1:85107762-85107781 | None:intergenic | 15.0% |
| !!! | ACACAATTAAGTTTTTTAAT+AGG | - | chr3_1:85108797-85108816 | Msa0382480:CDS | 15.0% |
| !! | TTATTATGTCTTTCAAAAAA+AGG | - | chr3_1:85109105-85109124 | Msa0382480:CDS | 15.0% |
| !! | TAATGTCTTATATGTAAGAT+AGG | - | chr3_1:85100783-85100802 | Msa0382480:intron | 20.0% |
| !! | TATAGTAATGAAGAAAAGAA+TGG | + | chr3_1:85101053-85101072 | None:intergenic | 20.0% |
| !! | TTGCTTTCTCATTTATTAAT+TGG | - | chr3_1:85101092-85101111 | Msa0382480:intron | 20.0% |
| !!! | ATATATTTTAGTACGAAACA+TGG | + | chr3_1:85101183-85101202 | None:intergenic | 20.0% |
| !! | GAATGAATTGATTAATTACA+TGG | - | chr3_1:85101221-85101240 | Msa0382480:intron | 20.0% |
| !! | GATTTGTGAACATAAATAAT+AGG | - | chr3_1:85101375-85101394 | Msa0382480:intron | 20.0% |
| !! | ACATTGATCTGATAAATATA+TGG | + | chr3_1:85101453-85101472 | None:intergenic | 20.0% |
| !!! | TTTTGCAAACAATTGATTTT+TGG | + | chr3_1:85101642-85101661 | None:intergenic | 20.0% |
| !!! | ATTATTTCTTTATCATTAGC+GGG | - | chr3_1:85102358-85102377 | Msa0382480:intron | 20.0% |
| !!! | ATTTTCTTGATTTAGTTTAG+GGG | - | chr3_1:85102694-85102713 | Msa0382480:intron | 20.0% |
| !!! | AAATATATTTTAAGCAGAGA+TGG | - | chr3_1:85102829-85102848 | Msa0382480:intron | 20.0% |
| !! | TCTAAATCAAAATGTTTATC+TGG | + | chr3_1:85103075-85103094 | None:intergenic | 20.0% |
| !!! | TGATCATTTCTTTATTTTGA+AGG | - | chr3_1:85103293-85103312 | Msa0382480:intron | 20.0% |
| !!! | TTACTATATCATTGATTCAT+TGG | - | chr3_1:85103329-85103348 | Msa0382480:intron | 20.0% |
| !!! | TACTATATCATTGATTCATT+GGG | - | chr3_1:85103330-85103349 | Msa0382480:intron | 20.0% |
| !! | TAAAGATGAAGAAGTTAATA+AGG | - | chr3_1:85103431-85103450 | Msa0382480:intron | 20.0% |
| !!! | ATAATCTCTAAACTATGTTT+TGG | - | chr3_1:85103806-85103825 | Msa0382480:intron | 20.0% |
| !! | TTATTAAGTTACAAAAGCTA+AGG | + | chr3_1:85103930-85103949 | None:intergenic | 20.0% |
| !! | AATTAATGCATCTCAATATT+TGG | + | chr3_1:85104008-85104027 | None:intergenic | 20.0% |
| !!! | TTTTCCTGAACAATAATATT+TGG | + | chr3_1:85104047-85104066 | None:intergenic | 20.0% |
| !!! | AATATTGTAGTTTGATTTTG+CGG | + | chr3_1:85104319-85104338 | None:intergenic | 20.0% |
| !! | CTTATAAAGTAAAATTTGTG+TGG | - | chr3_1:85104435-85104454 | Msa0382480:intron | 20.0% |
| !!! | AATAATTAAGGGTATAATAG+TGG | + | chr3_1:85104704-85104723 | None:intergenic | 20.0% |
| !!! | CTCTTTATTACACTTTTTTT+TGG | + | chr3_1:85104929-85104948 | None:intergenic | 20.0% |
| !! | TTAAATTAAACAAACCACAA+AGG | + | chr3_1:85106728-85106747 | None:intergenic | 20.0% |
| !! | TTAATAAACAGAGACAAATA+AGG | + | chr3_1:85107485-85107504 | None:intergenic | 20.0% |
| !! | GGAAATTATATAGTTATAAG+GGG | - | chr3_1:85107606-85107625 | Msa0382480:intron | 20.0% |
| !! | GATAGATAAATTTAATACTC+AGG | - | chr3_1:85107765-85107784 | Msa0382480:CDS | 20.0% |
| !!! | AATAGAAGTATAATATGTTC+TGG | - | chr3_1:85107992-85108011 | Msa0382480:intron | 20.0% |
| !! | GGAAAAATAATACTTTAGTA+TGG | + | chr3_1:85108051-85108070 | None:intergenic | 20.0% |
| !! | TTAAACTAAATCACAAGTTA+TGG | + | chr3_1:85108093-85108112 | None:intergenic | 20.0% |
| !!! | TTTTAATTTCAACAAGTCAT+GGG | + | chr3_1:85108628-85108647 | None:intergenic | 20.0% |
| ! | AATTAGCCATTGAAATAACA+TGG | - | chr3_1:85100563-85100582 | Msa0382480:CDS | 25.0% |
| !!! | CTTAATCCATGTTATTTCAA+TGG | + | chr3_1:85100572-85100591 | None:intergenic | 25.0% |
| !!! | GATTTTTAAGATGGATATGA+AGG | + | chr3_1:85101258-85101277 | None:intergenic | 25.0% |
| ! | CATATCCATCTTAAAAATCA+TGG | - | chr3_1:85101259-85101278 | Msa0382480:intron | 25.0% |
| ! | TTGTGAACATAAATAATAGG+TGG | - | chr3_1:85101378-85101397 | Msa0382480:intron | 25.0% |
| !! | ATTTGTTAGTCATCTGTTAT+CGG | + | chr3_1:85101419-85101438 | None:intergenic | 25.0% |
| ! | TAAAACTACACAAATCTTAG+TGG | + | chr3_1:85101547-85101566 | None:intergenic | 25.0% |
| !! | TTTAATTAATTAACGGGTGT+TGG | + | chr3_1:85101677-85101696 | None:intergenic | 25.0% |
| ! | AGTTACAAAGAAACAAAGTA+GGG | + | chr3_1:85102195-85102214 | None:intergenic | 25.0% |
| ! | TAGTTACAAAGAAACAAAGT+AGG | + | chr3_1:85102196-85102215 | None:intergenic | 25.0% |
| ! | TATTAGTCCTTTGTCAAAAA+AGG | - | chr3_1:85102249-85102268 | Msa0382480:intron | 25.0% |
| ! | AAAGTCTATCAAAGATGTAT+TGG | - | chr3_1:85102407-85102426 | Msa0382480:intron | 25.0% |
| ! | AAGTCTATCAAAGATGTATT+GGG | - | chr3_1:85102408-85102427 | Msa0382480:intron | 25.0% |
| !!! | TTTTCTTGATTTAGTTTAGG+GGG | - | chr3_1:85102695-85102714 | Msa0382480:intron | 25.0% |
| ! | ATTTACTTGAATTTCCTTGA+AGG | + | chr3_1:85102801-85102820 | None:intergenic | 25.0% |
| ! | TTCAAGGAAATTCAAGTAAA+TGG | - | chr3_1:85102800-85102819 | Msa0382480:intron | 25.0% |
| ! | TCAAGGAAATTCAAGTAAAT+GGG | - | chr3_1:85102801-85102820 | Msa0382480:intron | 25.0% |
| !! | CTATGTCTTTTGATGAAATA+TGG | - | chr3_1:85103193-85103212 | Msa0382480:intron | 25.0% |
| ! | CAACTAACTATGTAAATTCT+TGG | + | chr3_1:85103270-85103289 | None:intergenic | 25.0% |
| ! | CAAGAATTTACATAGTTAGT+TGG | - | chr3_1:85103268-85103287 | Msa0382480:intron | 25.0% |
| !!! | TTTCTTTATTTTGAAGGTAG+AGG | - | chr3_1:85103299-85103318 | Msa0382480:intron | 25.0% |
| ! | ATGAAGAAGTTAATAAGGAT+GGG | - | chr3_1:85103436-85103455 | Msa0382480:intron | 25.0% |
| ! | AAAGCCAAATATTATTGTTC+AGG | - | chr3_1:85104040-85104059 | Msa0382480:intron | 25.0% |
| ! | ATTCTGTGAAGTTAAATTCA+AGG | - | chr3_1:85104125-85104144 | Msa0382480:intron | 25.0% |
| ! | AAACCATAGCTTATAATATG+AGG | + | chr3_1:85104208-85104227 | None:intergenic | 25.0% |
| ! | GAATGTTGAAAAGAAAATGT+TGG | + | chr3_1:85104398-85104417 | None:intergenic | 25.0% |
| !!! | GAATATTAGCAACTTTTTCT+TGG | + | chr3_1:85104525-85104544 | None:intergenic | 25.0% |
| ! | CTTATTAAGTAGAAACATCA+TGG | - | chr3_1:85104544-85104563 | Msa0382480:intron | 25.0% |
| ! | AAGAGACAATTATTATGAGA+CGG | + | chr3_1:85104616-85104635 | None:intergenic | 25.0% |
| !!! | TTTTTTGACAAACACTCTTT+TGG | - | chr3_1:85104990-85105009 | Msa0382480:intron | 25.0% |
| ! | AGATATCATTTCTAATGACA+TGG | + | chr3_1:85105053-85105072 | None:intergenic | 25.0% |
| ! | CTGATACATAAAATTTGTGA+TGG | + | chr3_1:85105551-85105570 | None:intergenic | 25.0% |
| !! | GTAAGAAAACTTGAATTTTC+TGG | + | chr3_1:85105625-85105644 | None:intergenic | 25.0% |
| ! | ATCAGGTATAATACAATCTT+CGG | + | chr3_1:85106773-85106792 | None:intergenic | 25.0% |
| !! | GATTCATGTTTATCCTTTTT+CGG | - | chr3_1:85107329-85107348 | Msa0382480:intron | 25.0% |
| !! | ATTCATGTTTATCCTTTTTC+GGG | - | chr3_1:85107330-85107349 | Msa0382480:intron | 25.0% |
| ! | GAGAAATCAACTATTTGTTT+AGG | + | chr3_1:85107454-85107473 | None:intergenic | 25.0% |
| !! | ACAAATAGTTGATTTCTCAA+AGG | - | chr3_1:85107456-85107475 | Msa0382480:intron | 25.0% |
| ! | AGATATAAGTCTTCTTCAAA+GGG | + | chr3_1:85107520-85107539 | None:intergenic | 25.0% |
| ! | TAGATATAAGTCTTCTTCAA+AGG | + | chr3_1:85107521-85107540 | None:intergenic | 25.0% |
| !! | ATCTTATACTCTTTTTGCAA+TGG | - | chr3_1:85107718-85107737 | Msa0382480:CDS | 25.0% |
| ! | AAATTTAATACTCAGGCATA+AGG | - | chr3_1:85107772-85107791 | Msa0382480:CDS | 25.0% |
| ! | ATAGTAAAGTCAACAATGAA+GGG | + | chr3_1:85107932-85107951 | None:intergenic | 25.0% |
| ! | AATAGTAAAGTCAACAATGA+AGG | + | chr3_1:85107933-85107952 | None:intergenic | 25.0% |
| !!! | TTCATTGTTGACTTTACTAT+TGG | - | chr3_1:85107932-85107951 | Msa0382480:CDS | 25.0% |
| !! | TTTTAATGATTTCAGAGAAC+AGG | - | chr3_1:85108247-85108266 | Msa0382480:intron | 25.0% |
| ! | TTTAATGATTTCAGAGAACA+GGG | - | chr3_1:85108248-85108267 | Msa0382480:intron | 25.0% |
| !! | TTATGAAAGTATGTATGAAG+AGG | - | chr3_1:85108516-85108535 | Msa0382480:intron | 25.0% |
| !! | TATGAAAGTATGTATGAAGA+GGG | - | chr3_1:85108517-85108536 | Msa0382480:intron | 25.0% |
| !!! | GTTTTAATTTCAACAAGTCA+TGG | + | chr3_1:85108629-85108648 | None:intergenic | 25.0% |
| ! | ATGTTTAAATAGAGACTTCA+AGG | - | chr3_1:85108736-85108755 | Msa0382480:CDS | 25.0% |
| AACCAATTAAAGCTTGAGTT+AGG | - | chr3_1:85100502-85100521 | Msa0382480:CDS | 30.0% | |
| ATAAGACATTAAATGTGACG+TGG | + | chr3_1:85100774-85100793 | None:intergenic | 30.0% | |
| ! | ATGTGTTACTATGTGTGTAT+AGG | - | chr3_1:85100862-85100881 | Msa0382480:intron | 30.0% |
| ! | TGTGTTACTATGTGTGTATA+GGG | - | chr3_1:85100863-85100882 | Msa0382480:intron | 30.0% |
| !! | CTCAACCATGATTTTTAAGA+TGG | + | chr3_1:85101267-85101286 | None:intergenic | 30.0% |
| CAAATCAAGCAGAATAATGT+TGG | + | chr3_1:85101361-85101380 | None:intergenic | 30.0% | |
| TTTGTTAGTCATCTGTTATC+GGG | + | chr3_1:85101418-85101437 | None:intergenic | 30.0% | |
| ATCAATTGTTTGCAAAAGCA+AGG | - | chr3_1:85101645-85101664 | Msa0382480:intron | 30.0% | |
| GGTGAGTAATACTTTATTAC+AGG | - | chr3_1:85101715-85101734 | Msa0382480:intron | 30.0% | |
| CTTTATTACAGGTTTGTCTA+AGG | - | chr3_1:85101726-85101745 | Msa0382480:intron | 30.0% | |
| ! | AGCAATAACCTTTGAAAACA+CGG | - | chr3_1:85101784-85101803 | Msa0382480:intron | 30.0% |
| GTAAAGTCAGATAAGAAACA+CGG | - | chr3_1:85101806-85101825 | Msa0382480:intron | 30.0% | |
| TAAAGTCAGATAAGAAACAC+GGG | - | chr3_1:85101807-85101826 | Msa0382480:intron | 30.0% | |
| AACAATGTGAAGTTTGATGA+AGG | - | chr3_1:85101872-85101891 | Msa0382480:intron | 30.0% | |
| CAAGTTTGGATATCAATAGA+AGG | - | chr3_1:85102041-85102060 | Msa0382480:intron | 30.0% | |
| GATATCAATAGAAGGTTCAA+GGG | - | chr3_1:85102049-85102068 | Msa0382480:intron | 30.0% | |
| ATATCAATAGAAGGTTCAAG+GGG | - | chr3_1:85102050-85102069 | Msa0382480:intron | 30.0% | |
| TGTAGAAGTTTCTAATTGAG+CGG | + | chr3_1:85102095-85102114 | None:intergenic | 30.0% | |
| !!! | CTAATAGCCTTTTTTGACAA+AGG | + | chr3_1:85102259-85102278 | None:intergenic | 30.0% |
| ACAAATTATTGTATGGCTTG+AGG | - | chr3_1:85102461-85102480 | Msa0382480:intron | 30.0% | |
| CAAATTATTGTATGGCTTGA+GGG | - | chr3_1:85102462-85102481 | Msa0382480:intron | 30.0% | |
| AAGACATGAGTTCATAAGTA+AGG | - | chr3_1:85102541-85102560 | Msa0382480:intron | 30.0% | |
| AAGTGCATGTTAGAAATTGA+TGG | - | chr3_1:85102730-85102749 | Msa0382480:intron | 30.0% | |
| !! | TTGGTATACCTTGATTTGTA+TGG | + | chr3_1:85102966-85102985 | None:intergenic | 30.0% |
| TTGTCAAATTGAGTTCTTGT+TGG | + | chr3_1:85102985-85103004 | None:intergenic | 30.0% | |
| AACAACTAAAGGTCTCAAAT+TGG | + | chr3_1:85103112-85103131 | None:intergenic | 30.0% | |
| ATGATTCATGTGTGATGTAT+GGG | - | chr3_1:85103400-85103419 | Msa0382480:intron | 30.0% | |
| GATGAAGAAGTTAATAAGGA+TGG | - | chr3_1:85103435-85103454 | Msa0382480:intron | 30.0% | |
| TGAAGAAGTTAATAAGGATG+GGG | - | chr3_1:85103437-85103456 | Msa0382480:intron | 30.0% | |
| TTTCAAATCCTTATCTTCAC+CGG | - | chr3_1:85103598-85103617 | Msa0382480:intron | 30.0% | |
| GAAATACAACATAGAAGATG+TGG | + | chr3_1:85103667-85103686 | None:intergenic | 30.0% | |
| CTTAACAAATGAACATCTAG+AGG | - | chr3_1:85103686-85103705 | Msa0382480:intron | 30.0% | |
| AAAACATAGTCACGCATTTA+AGG | - | chr3_1:85103729-85103748 | Msa0382480:intron | 30.0% | |
| !! | ATTTAAGGAATTTTGACCGT+TGG | - | chr3_1:85103744-85103763 | Msa0382480:intron | 30.0% |
| GTTATTCAATCTTCATCCAA+CGG | + | chr3_1:85103763-85103782 | None:intergenic | 30.0% | |
| AGTAGCTAATCAATGAAGAT+TGG | + | chr3_1:85103846-85103865 | None:intergenic | 30.0% | |
| ! | TAGAAGTGTATTTCTTTCTG+AGG | - | chr3_1:85103957-85103976 | Msa0382480:intron | 30.0% |
| !!! | TCACATGTTTTAATCGCAAT+TGG | - | chr3_1:85104174-85104193 | Msa0382480:intron | 30.0% |
| CTACCTCATATTATAAGCTA+TGG | - | chr3_1:85104202-85104221 | Msa0382480:intron | 30.0% | |
| ! | TGGGTCTCATACTTTAAAAA+TGG | - | chr3_1:85104455-85104474 | Msa0382480:intron | 30.0% |
| ! | GGGTCTCATACTTTAAAAAT+GGG | - | chr3_1:85104456-85104475 | Msa0382480:intron | 30.0% |
| ! | AAAATGGGTTCCATGTAAAA+TGG | - | chr3_1:85104471-85104490 | Msa0382480:intron | 30.0% |
| ! | GTATATCTGACCATTTTACA+TGG | + | chr3_1:85104484-85104503 | None:intergenic | 30.0% |
| GTAAAATGGTCAGATATACT+TGG | - | chr3_1:85104485-85104504 | Msa0382480:intron | 30.0% | |
| ACTCCACTAACTAAAATCAT+TGG | - | chr3_1:85104744-85104763 | Msa0382480:intron | 30.0% | |
| !!! | ACTCCAATGATTTTAGTTAG+TGG | + | chr3_1:85104750-85104769 | None:intergenic | 30.0% |
| ATGTTTGTGCACGATAATTA+AGG | + | chr3_1:85104811-85104830 | None:intergenic | 30.0% | |
| ATTAAACGAGTTTGATACCA+AGG | - | chr3_1:85104829-85104848 | Msa0382480:intron | 30.0% | |
| TTAAACGAGTTTGATACCAA+GGG | - | chr3_1:85104830-85104849 | Msa0382480:intron | 30.0% | |
| ATTCTACTAATTTACTCCCT+TGG | + | chr3_1:85104849-85104868 | None:intergenic | 30.0% | |
| AGTTATGTAACTTAGTGAGT+GGG | + | chr3_1:85105225-85105244 | None:intergenic | 30.0% | |
| AAGTTATGTAACTTAGTGAG+TGG | + | chr3_1:85105226-85105245 | None:intergenic | 30.0% | |
| ! | TTCTCTCTTTTGTATGAGTT+TGG | - | chr3_1:85105386-85105405 | Msa0382480:intron | 30.0% |
| ! | TGTGCTGAAACATAACATTT+TGG | - | chr3_1:85105585-85105604 | Msa0382480:intron | 30.0% |
| TGAAAGCAAAACAGAATACA+CGG | + | chr3_1:85105869-85105888 | None:intergenic | 30.0% | |
| AGAATGCTAATAGGCAATTT+AGG | + | chr3_1:85106042-85106061 | None:intergenic | 30.0% | |
| CTGAAATTTGAGAACAACAA+GGG | + | chr3_1:85106076-85106095 | None:intergenic | 30.0% | |
| GCTTGTAATTCTTCAAGAAT+TGG | + | chr3_1:85106213-85106232 | None:intergenic | 30.0% | |
| GAATTACAAGCACATCATAT+AGG | - | chr3_1:85106222-85106241 | Msa0382480:CDS | 30.0% | |
| !!! | TTATTGTCATTTTCCGTTGA+CGG | - | chr3_1:85106335-85106354 | Msa0382480:CDS | 30.0% |
| ATCGAAAATACACAACAATC+AGG | + | chr3_1:85106457-85106476 | None:intergenic | 30.0% | |
| AAGGGGAAATTATCAAAACA+AGG | + | chr3_1:85106484-85106503 | None:intergenic | 30.0% | |
| AGACAAACACTCAGAAATAA+GGG | + | chr3_1:85106502-85106521 | None:intergenic | 30.0% | |
| AAGACAAACACTCAGAAATA+AGG | + | chr3_1:85106503-85106522 | None:intergenic | 30.0% | |
| CAAATGGGTCAAATTATGAA+AGG | + | chr3_1:85106571-85106590 | None:intergenic | 30.0% | |
| AAACTAAACAAACCTCACTA+AGG | + | chr3_1:85106671-85106690 | None:intergenic | 30.0% | |
| ! | TAGTGAGGTTTGTTTAGTTT+AGG | - | chr3_1:85106671-85106690 | Msa0382480:CDS | 30.0% |
| ! | AGTGAGGTTTGTTTAGTTTA+GGG | - | chr3_1:85106672-85106691 | Msa0382480:CDS | 30.0% |
| ! | TCAAAAGAGTACAAGTTCTA+AGG | + | chr3_1:85106849-85106868 | None:intergenic | 30.0% |
| ! | TTAGAACTTGTACTCTTTTG+AGG | - | chr3_1:85106848-85106867 | Msa0382480:CDS | 30.0% |
| AGAGTATAAGATGTGAAGAA+CGG | + | chr3_1:85107710-85107729 | None:intergenic | 30.0% | |
| !! | TTGTTGACTTTACTATTGGT+TGG | - | chr3_1:85107936-85107955 | Msa0382480:CDS | 30.0% |
| !! | GTATAATATGTTCTGGTTTG+TGG | - | chr3_1:85107999-85108018 | Msa0382480:intron | 30.0% |
| ! | TTCCACAGCTGAAATTTTTA+TGG | - | chr3_1:85108161-85108180 | Msa0382480:intron | 30.0% |
| AACCATAAAAATTTCAGCTG+TGG | + | chr3_1:85108166-85108185 | None:intergenic | 30.0% | |
| ! | GCTGAAATTTTTATGGTTCT+TGG | - | chr3_1:85108168-85108187 | Msa0382480:intron | 30.0% |
| GAAGACATGAAATTTCTACT+TGG | - | chr3_1:85108203-85108222 | Msa0382480:intron | 30.0% | |
| ! | TTTTCTCGTATCAACAGTTT+AGG | - | chr3_1:85108356-85108375 | Msa0382480:intron | 30.0% |
| TTTCTCGTATCAACAGTTTA+GGG | - | chr3_1:85108357-85108376 | Msa0382480:intron | 30.0% | |
| ! | TTTTTGTTGAGAGAGTAGTT+TGG | - | chr3_1:85108405-85108424 | Msa0382480:intron | 30.0% |
| ! | TTTTGTTGAGAGAGTAGTTT+GGG | - | chr3_1:85108406-85108425 | Msa0382480:intron | 30.0% |
| TTGTTATATGAGAAGTAAGC+TGG | - | chr3_1:85108484-85108503 | Msa0382480:intron | 30.0% | |
| ! | ATGAAAGTATGTATGAAGAG+GGG | - | chr3_1:85108518-85108537 | Msa0382480:intron | 30.0% |
| AAAACCATGTTGCACTTATT+AGG | - | chr3_1:85108644-85108663 | Msa0382480:intron | 30.0% | |
| ATTTCCTAATAAGTGCAACA+TGG | + | chr3_1:85108651-85108670 | None:intergenic | 30.0% | |
| ATGTTGCACTTATTAGGAAA+TGG | - | chr3_1:85108650-85108669 | Msa0382480:intron | 30.0% | |
| ! | GTCCTAACTCAAGCTTTAAT+TGG | + | chr3_1:85100507-85100526 | None:intergenic | 35.0% |
| ! | AAGCTTGAGTTAGGACTTTT+TGG | - | chr3_1:85100511-85100530 | Msa0382480:CDS | 35.0% |
| !!! | GGTTTTAAGGTACGATGAAA+GGG | + | chr3_1:85100637-85100656 | None:intergenic | 35.0% |
| !!! | TGGTTTTAAGGTACGATGAA+AGG | + | chr3_1:85100638-85100657 | None:intergenic | 35.0% |
| GGAAGAACCAAAAGGTAAAA+TGG | - | chr3_1:85100898-85100917 | Msa0382480:intron | 35.0% | |
| AGAACCAAAAGGTAAAATGG+TGG | - | chr3_1:85100901-85100920 | Msa0382480:intron | 35.0% | |
| CTTCCTTTGAACATTGGATT+CGG | + | chr3_1:85100972-85100991 | None:intergenic | 35.0% | |
| TTCAAAGGAAGCTTCCTATA+CGG | - | chr3_1:85100981-85101000 | Msa0382480:intron | 35.0% | |
| !!! | GAGGTATTGCCTTCTATTTT+TGG | + | chr3_1:85101149-85101168 | None:intergenic | 35.0% |
| AAACATGGCATGTGTAATAG+AGG | + | chr3_1:85101168-85101187 | None:intergenic | 35.0% | |
| ! | TGAAGGGGTGTATTTATAAG+TGG | + | chr3_1:85101335-85101354 | None:intergenic | 35.0% |
| AGAATAATGTTGGTCGTGAA+GGG | + | chr3_1:85101351-85101370 | None:intergenic | 35.0% | |
| AATAATAGGTGGTCTGATAG+CGG | - | chr3_1:85101389-85101408 | Msa0382480:intron | 35.0% | |
| AATTGTTTGCAAAAGCAAGG+TGG | - | chr3_1:85101648-85101667 | Msa0382480:intron | 35.0% | |
| ! | TGACTTTACCGTGTTTTCAA+AGG | + | chr3_1:85101795-85101814 | None:intergenic | 35.0% |
| AAACACGGGACTATAGAAAA+AGG | - | chr3_1:85101821-85101840 | Msa0382480:intron | 35.0% | |
| AACACGGGACTATAGAAAAA+GGG | - | chr3_1:85101822-85101841 | Msa0382480:intron | 35.0% | |
| AACATCCATATGAGTCAGAT+GGG | - | chr3_1:85101903-85101922 | Msa0382480:intron | 35.0% | |
| AAAGTAACTCTTGACTCTGT+GGG | + | chr3_1:85102001-85102020 | None:intergenic | 35.0% | |
| AAAAGTAACTCTTGACTCTG+TGG | + | chr3_1:85102002-85102021 | None:intergenic | 35.0% | |
| !!! | AGAGTTACTTTTCCAAGTTC+AGG | - | chr3_1:85102010-85102029 | Msa0382480:intron | 35.0% |
| !!! | GAGTTACTTTTCCAAGTTCA+GGG | - | chr3_1:85102011-85102030 | Msa0382480:intron | 35.0% |
| GGATATCAATAGAAGGTTCA+AGG | - | chr3_1:85102048-85102067 | Msa0382480:intron | 35.0% | |
| AATCCATCAAACTCCTTTCA+CGG | - | chr3_1:85102114-85102133 | Msa0382480:intron | 35.0% | |
| TAGAATTGACATACCGTGAA+AGG | + | chr3_1:85102130-85102149 | None:intergenic | 35.0% | |
| TCGCGCTACAAATTATTGTA+TGG | - | chr3_1:85102454-85102473 | Msa0382480:intron | 35.0% | |
| TCTGATTTCTGCAAAATGAG+AGG | + | chr3_1:85102757-85102776 | None:intergenic | 35.0% | |
| !! | TCTCTAAGATCAAACCTTCA+AGG | - | chr3_1:85102784-85102803 | Msa0382480:intron | 35.0% |
| !!! | CGTTAGTTTTGAGCTTTGAT+TGG | + | chr3_1:85102855-85102874 | None:intergenic | 35.0% |
| ! | CTTTTCACTTCGTTGATCAA+AGG | + | chr3_1:85102890-85102909 | None:intergenic | 35.0% |
| CTTTGATCAACGAAGTGAAA+AGG | - | chr3_1:85102888-85102907 | Msa0382480:intron | 35.0% | |
| TAGTTGCACTAATATCTCAC+TGG | - | chr3_1:85102938-85102957 | Msa0382480:intron | 35.0% | |
| AAACCTGTGTATGATTTCTG+AGG | + | chr3_1:85103138-85103157 | None:intergenic | 35.0% | |
| TAAGCAATGAAACTTCTCAG+GGG | + | chr3_1:85103166-85103185 | None:intergenic | 35.0% | |
| CTAAGCAATGAAACTTCTCA+GGG | + | chr3_1:85103167-85103186 | None:intergenic | 35.0% | |
| TCTAAGCAATGAAACTTCTC+AGG | + | chr3_1:85103168-85103187 | None:intergenic | 35.0% | |
| GAGAAGTTTCATTGCTTAGA+AGG | - | chr3_1:85103168-85103187 | Msa0382480:intron | 35.0% | |
| CAACAACAACAACAAGAACA+AGG | - | chr3_1:85103230-85103249 | Msa0382480:intron | 35.0% | |
| !!! | ACTTTTTGAAGGGTGTCAAA+GGG | - | chr3_1:85103359-85103378 | Msa0382480:intron | 35.0% |
| GATGATTCATGTGTGATGTA+TGG | - | chr3_1:85103399-85103418 | Msa0382480:intron | 35.0% | |
| GAAGAAGTTAATAAGGATGG+GGG | - | chr3_1:85103438-85103457 | Msa0382480:intron | 35.0% | |
| !!! | AGTTTTGAGATAGTTTGTCG+TGG | - | chr3_1:85103489-85103508 | Msa0382480:intron | 35.0% |
| AGTTAGACAACTTGAGAAAG+AGG | - | chr3_1:85103560-85103579 | Msa0382480:intron | 35.0% | |
| TTGAGAAAGAGGAGAAGAAA+TGG | - | chr3_1:85103571-85103590 | Msa0382480:intron | 35.0% | |
| GAAAATCAATCTGCAATTGC+CGG | + | chr3_1:85103620-85103639 | None:intergenic | 35.0% | |
| GACAATTATTATGAGACGGA+TGG | + | chr3_1:85104612-85104631 | None:intergenic | 35.0% | |
| GAATTGGGTAGTACAGTAAA+TGG | - | chr3_1:85105087-85105106 | Msa0382480:intron | 35.0% | |
| AGATAGCAACTCACAAAACA+TGG | - | chr3_1:85105116-85105135 | Msa0382480:intron | 35.0% | |
| CAATGCGAAGAAGAGTAATA+GGG | - | chr3_1:85105140-85105159 | Msa0382480:intron | 35.0% | |
| !! | GTAATAGGGTTTTCTGAAAG+AGG | - | chr3_1:85105154-85105173 | Msa0382480:intron | 35.0% |
| ! | TTTCTGAAAGAGGAAGAGAT+TGG | - | chr3_1:85105164-85105183 | Msa0382480:intron | 35.0% |
| ACCATTTCTCTCTCTTTCAT+TGG | - | chr3_1:85105276-85105295 | Msa0382480:intron | 35.0% | |
| TCCAATGAAAGAGAGAGAAA+TGG | + | chr3_1:85105280-85105299 | None:intergenic | 35.0% | |
| ! | TCCATCAAAAGTTTTTGCCT+TGG | - | chr3_1:85105895-85105914 | Msa0382480:intron | 35.0% |
| ! | CCATCAAAAGTTTTTGCCTT+GGG | - | chr3_1:85105896-85105915 | Msa0382480:intron | 35.0% |
| ! | TTTTGCCTTGGGATTACATA+CGG | - | chr3_1:85105907-85105926 | Msa0382480:intron | 35.0% |
| GCTGAAATTTGAGAACAACA+AGG | + | chr3_1:85106077-85106096 | None:intergenic | 35.0% | |
| !!! | GATTTCATGTTGCTTTTGCT+TGG | - | chr3_1:85106183-85106202 | Msa0382480:CDS | 35.0% |
| TCATATAGGTTTCAGATCTG+AGG | - | chr3_1:85106236-85106255 | Msa0382480:CDS | 35.0% | |
| AATATGTTGCCAAACACAGA+TGG | - | chr3_1:85106416-85106435 | Msa0382480:CDS | 35.0% | |
| ATATCCTTTCCATCTGTGTT+TGG | + | chr3_1:85106428-85106447 | None:intergenic | 35.0% | |
| GACAAACACTCAGAAATAAG+GGG | + | chr3_1:85106501-85106520 | None:intergenic | 35.0% | |
| TGGGTCAAATTATGAAAGGT+GGG | + | chr3_1:85106567-85106586 | None:intergenic | 35.0% | |
| ATGGGTCAAATTATGAAAGG+TGG | + | chr3_1:85106568-85106587 | None:intergenic | 35.0% | |
| TTCTCTCTCTCAACTATAAC+TGG | - | chr3_1:85106595-85106614 | Msa0382480:CDS | 35.0% | |
| !!! | GGTCAAGTTTTTGAAGCTTT+GGG | + | chr3_1:85106650-85106669 | None:intergenic | 35.0% |
| !!! | AGGTCAAGTTTTTGAAGCTT+TGG | + | chr3_1:85106651-85106670 | None:intergenic | 35.0% |
| TCAAAAACTTGACCTTAGTG+AGG | - | chr3_1:85106656-85106675 | Msa0382480:CDS | 35.0% | |
| TATTTCCTAACATGCCTTTG+TGG | - | chr3_1:85106711-85106730 | Msa0382480:CDS | 35.0% | |
| AGGTATAATACAATCTTCGG+TGG | + | chr3_1:85106770-85106789 | None:intergenic | 35.0% | |
| TTGTATTATACCTGATGTCC+TGG | - | chr3_1:85106777-85106796 | Msa0382480:CDS | 35.0% | |
| AGGTTTAATGAAATGCAGTG+TGG | + | chr3_1:85106829-85106848 | None:intergenic | 35.0% | |
| !!! | TGTACTCTTTTGAGGTTCAA+AGG | - | chr3_1:85106856-85106875 | Msa0382480:CDS | 35.0% |
| ! | GTTTTGCAAACCATGACAAT+CGG | - | chr3_1:85106928-85106947 | Msa0382480:CDS | 35.0% |
| CATAAAGTTCATGACCACAA+CGG | + | chr3_1:85107221-85107240 | None:intergenic | 35.0% | |
| TTATGTCAGTGCACAAGTTT+AGG | - | chr3_1:85107236-85107255 | Msa0382480:intron | 35.0% | |
| CATAAACAAGTCGAAGAAAC+AGG | + | chr3_1:85107295-85107314 | None:intergenic | 35.0% | |
| TGATTTGATGCATAACCTCA+TGG | - | chr3_1:85107371-85107390 | Msa0382480:intron | 35.0% | |
| TTCTCTTTGACACAGTAGTA+TGG | - | chr3_1:85107422-85107441 | Msa0382480:intron | 35.0% | |
| TAATACTCAGGCATAAGGTA+AGG | - | chr3_1:85107777-85107796 | Msa0382480:CDS | 35.0% | |
| CACATGATGAGACTGTTTAA+GGG | - | chr3_1:85107816-85107835 | Msa0382480:CDS | 35.0% | |
| ACATGATGAGACTGTTTAAG+GGG | - | chr3_1:85107817-85107836 | Msa0382480:CDS | 35.0% | |
| GTCTAATATCCCAAGAGATA+AGG | - | chr3_1:85107839-85107858 | Msa0382480:CDS | 35.0% | |
| !! | AAGGGATTGATTTGTTCTTG+TGG | - | chr3_1:85107884-85107903 | Msa0382480:CDS | 35.0% |
| TTTGTTCTTGTGGTACTGTT+AGG | - | chr3_1:85107894-85107913 | Msa0382480:CDS | 35.0% | |
| ! | TGACTTTACTATTGGTTGGT+TGG | - | chr3_1:85107940-85107959 | Msa0382480:CDS | 35.0% |
| ! | TTTACTATTGGTTGGTTGGT+TGG | - | chr3_1:85107944-85107963 | Msa0382480:CDS | 35.0% |
| !! | TGTTCTGGTTTGTGGTAAAA+TGG | - | chr3_1:85108007-85108026 | Msa0382480:intron | 35.0% |
| TTCTTCCTGTCTTGATAAAC+AGG | - | chr3_1:85108115-85108134 | Msa0382480:intron | 35.0% | |
| TGTCTTGATAAACAGGAAGT+CGG | - | chr3_1:85108122-85108141 | Msa0382480:intron | 35.0% | |
| TTCTCGTATCAACAGTTTAG+GGG | - | chr3_1:85108358-85108377 | Msa0382480:intron | 35.0% | |
| GTAGTTGATCATGTTTCAGT+AGG | - | chr3_1:85108829-85108848 | Msa0382480:CDS | 35.0% | |
| ! | CAAAGGTGAGGTAAATTTTG+TGG | - | chr3_1:85109168-85109187 | Msa0382480:CDS | 35.0% |
| !! | AATTTTGTGGTAGTTTGTCG+CGG | - | chr3_1:85109181-85109200 | Msa0382480:CDS | 35.0% |
| AGTTAGACAGCTAAAGAAAG+AGG | - | chr3_1:85109252-85109271 | Msa0382480:CDS | 35.0% | |
| TAAAGAAAGAGGAGCAGAAA+TGG | - | chr3_1:85109263-85109282 | Msa0382480:CDS | 35.0% | |
| GAAAACTCCTTCTCACGTTT+GGG | - | chr3_1:85100702-85100721 | Msa0382480:intron | 40.0% | |
| TACTATGTGTGTATAGGGAC+AGG | - | chr3_1:85100868-85100887 | Msa0382480:intron | 40.0% | |
| ACTATGTGTGTATAGGGACA+GGG | - | chr3_1:85100869-85100888 | Msa0382480:intron | 40.0% | |
| ACCAAAAGGTAAAATGGTGG+TGG | - | chr3_1:85100904-85100923 | Msa0382480:intron | 40.0% | |
| ! | ACCACCACCATTTTACCTTT+TGG | + | chr3_1:85100908-85100927 | None:intergenic | 40.0% |
| !! | AAAGGTAAAATGGTGGTGGT+CGG | - | chr3_1:85100908-85100927 | Msa0382480:intron | 40.0% |
| AGTTTGTATGACTCTAGCGA+TGG | - | chr3_1:85100934-85100953 | Msa0382480:intron | 40.0% | |
| AGACCGAATCCAATGTTCAA+AGG | - | chr3_1:85100966-85100985 | Msa0382480:intron | 40.0% | |
| AGGAAGCTTCCTTTGAACAT+TGG | + | chr3_1:85100978-85100997 | None:intergenic | 40.0% | |
| ! | AATCATCGAAGCTACCCTTT+TGG | - | chr3_1:85101021-85101040 | Msa0382480:intron | 40.0% |
| AAGAATGGAGCGTACCAAAA+GGG | + | chr3_1:85101038-85101057 | None:intergenic | 40.0% | |
| AAAGAATGGAGCGTACCAAA+AGG | + | chr3_1:85101039-85101058 | None:intergenic | 40.0% | |
| GTGAAGTGAGCTTGTGAAAT+GGG | + | chr3_1:85101123-85101142 | None:intergenic | 40.0% | |
| CTTCACGCACCAAAAATAGA+AGG | - | chr3_1:85101137-85101156 | Msa0382480:intron | 40.0% | |
| ! | CGTTTTTGTGAGGTAGTGTT+AGG | + | chr3_1:85101290-85101309 | None:intergenic | 40.0% |
| ! | AGGGGTGTATTTATAAGTGG+AGG | + | chr3_1:85101332-85101351 | None:intergenic | 40.0% |
| GAATAATGTTGGTCGTGAAG+GGG | + | chr3_1:85101350-85101369 | None:intergenic | 40.0% | |
| CAGAATAATGTTGGTCGTGA+AGG | + | chr3_1:85101352-85101371 | None:intergenic | 40.0% | |
| ! | GTCTAAGGTTATTGAAGCAC+AGG | - | chr3_1:85101741-85101760 | Msa0382480:intron | 40.0% |
| CAACATCCATATGAGTCAGA+TGG | - | chr3_1:85101902-85101921 | Msa0382480:intron | 40.0% | |
| ACTCATCAGAGTCAAACACA+GGG | + | chr3_1:85101931-85101950 | None:intergenic | 40.0% | |
| AAGTAACTCTTGACTCTGTG+GGG | + | chr3_1:85102000-85102019 | None:intergenic | 40.0% | |
| TTCAGGGACAAAGACAAGTT+TGG | - | chr3_1:85102027-85102046 | Msa0382480:intron | 40.0% | |
| ATACCGTGAAAGGAGTTTGA+TGG | + | chr3_1:85102120-85102139 | None:intergenic | 40.0% | |
| TTTGACAACCTCATCACACA+AGG | - | chr3_1:85102997-85103016 | Msa0382480:intron | 40.0% | |
| TCACACAAGGTTCATCTGAA+TGG | - | chr3_1:85103010-85103029 | Msa0382480:intron | 40.0% | |
| !! | TTCTGAGGCAGAACAACTAA+AGG | + | chr3_1:85103123-85103142 | None:intergenic | 40.0% |
| CAACAACAACAAGAACAAGG+TGG | - | chr3_1:85103233-85103252 | Msa0382480:intron | 40.0% | |
| ! | TTGGGTGAGAGACTTTTTGA+AGG | - | chr3_1:85103348-85103367 | Msa0382480:intron | 40.0% |
| ! | TGGGTGAGAGACTTTTTGAA+GGG | - | chr3_1:85103349-85103368 | Msa0382480:intron | 40.0% |
| !!! | GACTTTTTGAAGGGTGTCAA+AGG | - | chr3_1:85103358-85103377 | Msa0382480:intron | 40.0% |
| GAAGATGTGGAAGAGGATAA+AGG | + | chr3_1:85103654-85103673 | None:intergenic | 40.0% | |
| CAACATAGAAGATGTGGAAG+AGG | + | chr3_1:85103661-85103680 | None:intergenic | 40.0% | |
| ! | TATGTTTTTCCTAGTCCCAG+TGG | + | chr3_1:85103717-85103736 | None:intergenic | 40.0% |
| TACAGTCAAGTAGACGAAGA+GGG | - | chr3_1:85104369-85104388 | Msa0382480:intron | 40.0% | |
| GGTCAGATATACTTGGATGT+TGG | - | chr3_1:85104492-85104511 | Msa0382480:intron | 40.0% | |
| CGGATGGAGTATATGAAAGA+TGG | + | chr3_1:85104596-85104615 | None:intergenic | 40.0% | |
| CCTATTACTCTTCTTCGCAT+TGG | + | chr3_1:85105142-85105161 | None:intergenic | 40.0% | |
| CCAATGCGAAGAAGAGTAAT+AGG | - | chr3_1:85105139-85105158 | Msa0382480:intron | 40.0% | |
| ATGTAACTTAGTGAGTGGGT+TGG | + | chr3_1:85105221-85105240 | None:intergenic | 40.0% | |
| GGAATCAACTGTTTCCTTTG+TGG | - | chr3_1:85105297-85105316 | Msa0382480:intron | 40.0% | |
| !! | GAATGTTGTTTCGACCACAA+AGG | + | chr3_1:85105314-85105333 | None:intergenic | 40.0% |
| !! | ACTGGTTTGAGCTAAGTTAG+AGG | + | chr3_1:85105420-85105439 | None:intergenic | 40.0% |
| CCTATCATCATCGTCGTTAT+CGG | + | chr3_1:85105668-85105687 | None:intergenic | 40.0% | |
| TGATAGGATCAGCAATTTGC+CGG | - | chr3_1:85105681-85105700 | Msa0382480:intron | 40.0% | |
| ATATGACAGATGAGAGTCTC+CGG | + | chr3_1:85105703-85105722 | None:intergenic | 40.0% | |
| CAAAGAGGTGGATACATCTA+TGG | - | chr3_1:85105770-85105789 | Msa0382480:intron | 40.0% | |
| ! | CCCAAGGCAAAAACTTTTGA+TGG | + | chr3_1:85105899-85105918 | None:intergenic | 40.0% |
| GTCAACCATGTTGTACAAAG+CGG | - | chr3_1:85105970-85105989 | Msa0382480:intron | 40.0% | |
| AGTATCCACAAGGAGATCAA+TGG | + | chr3_1:85106004-85106023 | None:intergenic | 40.0% | |
| CTCCTTGTGGATACTATGTT+TGG | - | chr3_1:85106009-85106028 | Msa0382480:intron | 40.0% | |
| CACCAAACATAGTATCCACA+AGG | + | chr3_1:85106014-85106033 | None:intergenic | 40.0% | |
| CTTGTGGATACTATGTTTGG+TGG | - | chr3_1:85106012-85106031 | Msa0382480:intron | 40.0% | |
| TTGCAGCTGAGAATGCTAAT+AGG | + | chr3_1:85106051-85106070 | None:intergenic | 40.0% | |
| ATTTCAGCGTTTCTCTGTGA+AGG | - | chr3_1:85106089-85106108 | Msa0382480:intron | 40.0% | |
| TTTCAGCGTTTCTCTGTGAA+GGG | - | chr3_1:85106090-85106109 | Msa0382480:intron | 40.0% | |
| !!! | AGATGAAGGATTTTGAGGCA+GGG | + | chr3_1:85106135-85106154 | None:intergenic | 40.0% |
| AAAGCAAACCATATCTGCTC+TGG | + | chr3_1:85106316-85106335 | None:intergenic | 40.0% | |
| GGAGTTTCTCTGCATACAAA+TGG | - | chr3_1:85106371-85106390 | Msa0382480:CDS | 40.0% | |
| ! | ACAAACCACAAAGGCATGTT+AGG | + | chr3_1:85106719-85106738 | None:intergenic | 40.0% |
| TACCTGATGTCCTGGAAAAT+TGG | - | chr3_1:85106785-85106804 | Msa0382480:CDS | 40.0% | |
| ACCTGATGTCCTGGAAAATT+GGG | - | chr3_1:85106786-85106805 | Msa0382480:CDS | 40.0% | |
| TGCAGTGTGGAACAAACTTT+GGG | + | chr3_1:85106816-85106835 | None:intergenic | 40.0% | |
| ATGCAGTGTGGAACAAACTT+TGG | + | chr3_1:85106817-85106836 | None:intergenic | 40.0% | |
| AGAAGATAATCACAAGGCGA+AGG | + | chr3_1:85106958-85106977 | None:intergenic | 40.0% | |
| GGAGGAAGAAGATAATCACA+AGG | + | chr3_1:85106964-85106983 | None:intergenic | 40.0% | |
| TGTGATTATCTTCTTCCTCC+TGG | - | chr3_1:85106964-85106983 | Msa0382480:intron | 40.0% | |
| GTGATTATCTTCTTCCTCCT+GGG | - | chr3_1:85106965-85106984 | Msa0382480:intron | 40.0% | |
| TGAAAATCGACACGTAGCAT+GGG | + | chr3_1:85106991-85107010 | None:intergenic | 40.0% | |
| AGAATTATCCTCGTTCCCAA+GGG | - | chr3_1:85107023-85107042 | Msa0382480:intron | 40.0% | |
| TGAAAGTTGACATGTAGCAG+AGG | + | chr3_1:85107049-85107068 | None:intergenic | 40.0% | |
| GGCTTTCTCGAGAATAGTTA+AGG | - | chr3_1:85107143-85107162 | Msa0382480:intron | 40.0% | |
| CGAACTGACAAACATAAGAG+AGG | + | chr3_1:85107188-85107207 | None:intergenic | 40.0% | |
| TTCGTTAACTTCTACCGTTG+TGG | - | chr3_1:85107204-85107223 | Msa0382480:intron | 40.0% | |
| !!! | CATGTTTATCCTTTTTCGGG+TGG | - | chr3_1:85107333-85107352 | Msa0382480:intron | 40.0% |
| AACATACAACCACCCGAAAA+AGG | + | chr3_1:85107345-85107364 | None:intergenic | 40.0% | |
| CACTAAGCTGTCAAGCTTTA+TGG | - | chr3_1:85107585-85107604 | Msa0382480:intron | 40.0% | |
| GTTATAAGGGGTAGTTCACT+AGG | - | chr3_1:85107618-85107637 | Msa0382480:CDS | 40.0% | |
| CCTTAAACAGTCTCATCATG+TGG | + | chr3_1:85107818-85107837 | None:intergenic | 40.0% | |
| CCACATGATGAGACTGTTTA+AGG | - | chr3_1:85107815-85107834 | Msa0382480:CDS | 40.0% | |
| !! | ATACCATGGCCTTATCTCTT+GGG | + | chr3_1:85107851-85107870 | None:intergenic | 40.0% |
| !! | AATACCATGGCCTTATCTCT+TGG | + | chr3_1:85107852-85107871 | None:intergenic | 40.0% |
| AACAAATCAATCCCTTCACC+AGG | + | chr3_1:85107880-85107899 | None:intergenic | 40.0% | |
| CTAAATCACAAGTTATGGCC+TGG | + | chr3_1:85108088-85108107 | None:intergenic | 40.0% | |
| GACTTCCTGTTTATCAAGAC+AGG | + | chr3_1:85108123-85108142 | None:intergenic | 40.0% | |
| TGAGATGCAGTGTATCATCT+GGG | - | chr3_1:85108284-85108303 | Msa0382480:intron | 40.0% | |
| AGTGTATCATCTGGGCTTAA+TGG | - | chr3_1:85108292-85108311 | Msa0382480:intron | 40.0% | |
| AATGGAATGCTATGTTCCAG+TGG | - | chr3_1:85108310-85108329 | Msa0382480:intron | 40.0% | |
| ATCAACAGTTTAGGGGAGTA+TGG | - | chr3_1:85108365-85108384 | Msa0382480:intron | 40.0% | |
| TACATACACACAGCTTGAGA+GGG | + | chr3_1:85108455-85108474 | None:intergenic | 40.0% | |
| AGCATGCTGCAAAATCTATC+TGG | + | chr3_1:85108562-85108581 | None:intergenic | 40.0% | |
| ATGGATATGCTGTCATGATG+TGG | - | chr3_1:85108669-85108688 | Msa0382480:intron | 40.0% | |
| ATAACACATTCAGCCCTCAA+AGG | - | chr3_1:85109012-85109031 | Msa0382480:CDS | 40.0% | |
| TATGAGCCAAGAAGTTGACA+AGG | - | chr3_1:85109136-85109155 | Msa0382480:CDS | 40.0% | |
| ! | TGGCGATGATGATGAAGAAG+TGG | - | chr3_1:85100437-85100456 | Msa0382480:CDS | 45.0% |
| ! | CGATGATGATGAAGAAGTGG+TGG | - | chr3_1:85100440-85100459 | Msa0382480:CDS | 45.0% |
| GATGATGAAGAAGTGGTGGT+TGG | - | chr3_1:85100444-85100463 | Msa0382480:CDS | 45.0% | |
| AAGCAACAAGCACACAGTGA+AGG | - | chr3_1:85100477-85100496 | Msa0382480:CDS | 45.0% | |
| GTTTACAGTAGTTGCCACGT+TGG | + | chr3_1:85100539-85100558 | None:intergenic | 45.0% | |
| !! | ATGACTGCAGGGTGGTTTTA+AGG | + | chr3_1:85100650-85100669 | None:intergenic | 45.0% |
| ! | AACGTGAGAAGGAGTTTTCC+CGG | + | chr3_1:85100701-85100720 | None:intergenic | 45.0% |
| GGAAAACTCCTTCTCACGTT+TGG | - | chr3_1:85100701-85100720 | Msa0382480:intron | 45.0% | |
| TGATTGTCCCAAACGTGAGA+AGG | + | chr3_1:85100712-85100731 | None:intergenic | 45.0% | |
| TTGTATGACTCTAGCGATGG+AGG | - | chr3_1:85100937-85100956 | Msa0382480:intron | 45.0% | |
| GAAGCTTCCTATACGGTTGA+AGG | - | chr3_1:85100988-85101007 | Msa0382480:intron | 45.0% | |
| CCATTGACCTTCAACCGTAT+AGG | + | chr3_1:85100998-85101017 | None:intergenic | 45.0% | |
| CCTATACGGTTGAAGGTCAA+TGG | - | chr3_1:85100995-85101014 | Msa0382480:intron | 45.0% | |
| CGTGAAGTGAGCTTGTGAAA+TGG | + | chr3_1:85101124-85101143 | None:intergenic | 45.0% | |
| !!! | CCTCACAAGTCGTTTTTGTG+AGG | + | chr3_1:85101300-85101319 | None:intergenic | 45.0% |
| CCTCACAAAAACGACTTGTG+AGG | - | chr3_1:85101297-85101316 | Msa0382480:intron | 45.0% | |
| CTCATCAGAGTCAAACACAG+GGG | + | chr3_1:85101930-85101949 | None:intergenic | 45.0% | |
| GACTCATCAGAGTCAAACAC+AGG | + | chr3_1:85101932-85101951 | None:intergenic | 45.0% | |
| TCGAACGAATCCACAACAAG+CGG | - | chr3_1:85101953-85101972 | Msa0382480:intron | 45.0% | |
| CTTGTCTTTGTCCCTGAACT+TGG | + | chr3_1:85102025-85102044 | None:intergenic | 45.0% | |
| TCAATAGAAGGTTCAAGGGG+TGG | - | chr3_1:85102053-85102072 | Msa0382480:intron | 45.0% | |
| CAATAGAAGGTTCAAGGGGT+GGG | - | chr3_1:85102054-85102073 | Msa0382480:intron | 45.0% | |
| !! | CACTGGCTCCATACAAATCA+AGG | - | chr3_1:85102955-85102974 | Msa0382480:intron | 45.0% |
| CAGATGAACCTTGTGTGATG+AGG | + | chr3_1:85103008-85103027 | None:intergenic | 45.0% | |
| CTGCCTCAGAAATCATACAC+AGG | - | chr3_1:85103132-85103151 | Msa0382480:intron | 45.0% | |
| GGTGCAAAGAGTAGTTCAAG+AGG | - | chr3_1:85103459-85103478 | Msa0382480:intron | 45.0% | |
| TGCAATTGCCGGTGAAGATA+AGG | + | chr3_1:85103609-85103628 | None:intergenic | 45.0% | |
| ! | TTTTCCTAGTCCCAGTGGTT+AGG | + | chr3_1:85103712-85103731 | None:intergenic | 45.0% |
| CTACAGTCAAGTAGACGAAG+AGG | - | chr3_1:85104368-85104387 | Msa0382480:intron | 45.0% | |
| TGACGCAGATCTCGAGAATT+GGG | - | chr3_1:85105072-85105091 | Msa0382480:intron | 45.0% | |
| !! | CTTAGTGAGTGGGTTGGTTA+AGG | + | chr3_1:85105215-85105234 | None:intergenic | 45.0% |
| CCGATAACGACGATGATGAT+AGG | - | chr3_1:85105665-85105684 | Msa0382480:intron | 45.0% | |
| ! | TGGCAACAGCTTGTTTGGTA+GGG | + | chr3_1:85105738-85105757 | None:intergenic | 45.0% |
| ! | ACTAGTGGCAACAGCTTGTT+TGG | + | chr3_1:85105743-85105762 | None:intergenic | 45.0% |
| GATGTATCCACCTCTTTGCA+AGG | + | chr3_1:85105768-85105787 | None:intergenic | 45.0% | |
| TGAAGCGAAAACAGGCTTCT+TGG | + | chr3_1:85105840-85105859 | None:intergenic | 45.0% | |
| CTTTCCCCATGTCGTCAAAT+GGG | - | chr3_1:85105948-85105967 | Msa0382480:intron | 45.0% | |
| TTGACCCATTTGACGACATG+GGG | + | chr3_1:85105955-85105974 | None:intergenic | 45.0% | |
| GTTGACCCATTTGACGACAT+GGG | + | chr3_1:85105956-85105975 | None:intergenic | 45.0% | |
| CAACACCGCTTTGTACAACA+TGG | + | chr3_1:85105978-85105997 | None:intergenic | 45.0% | |
| TGAGACCATTGATCTCCTTG+TGG | - | chr3_1:85105996-85106015 | Msa0382480:intron | 45.0% | |
| ! | GTGGATACTATGTTTGGTGG+TGG | - | chr3_1:85106015-85106034 | Msa0382480:intron | 45.0% |
| ! | TTTGAGGCAGGGAAGTCTAA+TGG | + | chr3_1:85106124-85106143 | None:intergenic | 45.0% |
| !!! | GAGATGAAGGATTTTGAGGC+AGG | + | chr3_1:85106136-85106155 | None:intergenic | 45.0% |
| ! | CGCTGAGATGAAGGATTTTG+AGG | + | chr3_1:85106140-85106159 | None:intergenic | 45.0% |
| ATCCTTCATCTCAGCGAATC+TGG | - | chr3_1:85106144-85106163 | Msa0382480:CDS | 45.0% | |
| TCCTTCATCTCAGCGAATCT+GGG | - | chr3_1:85106145-85106164 | Msa0382480:CDS | 45.0% | |
| ! | CAAGTTGACCAGAGCAGATA+TGG | - | chr3_1:85106305-85106324 | Msa0382480:CDS | 45.0% |
| !! | ACATTACGAAGTGCCGTCAA+CGG | + | chr3_1:85106351-85106370 | None:intergenic | 45.0% |
| TCTCTGCATACAAATGGACG+AGG | - | chr3_1:85106377-85106396 | Msa0382480:CDS | 45.0% | |
| GTTGCCAAACACAGATGGAA+AGG | - | chr3_1:85106421-85106440 | Msa0382480:CDS | 45.0% | |
| AGGTGGGAATCTCATCATGA+GGG | + | chr3_1:85106551-85106570 | None:intergenic | 45.0% | |
| AAGGTGGGAATCTCATCATG+AGG | + | chr3_1:85106552-85106571 | None:intergenic | 45.0% | |
| !! | GAGAGAGAGAAGCGTCAAAT+GGG | + | chr3_1:85106586-85106605 | None:intergenic | 45.0% |
| !! | TGAGAGAGAGAAGCGTCAAA+TGG | + | chr3_1:85106587-85106606 | None:intergenic | 45.0% |
| ! | ACCCAATTTTCCAGGACATC+AGG | + | chr3_1:85106790-85106809 | None:intergenic | 45.0% |
| ! | TTGGGTCAACCCAATTTTCC+AGG | + | chr3_1:85106798-85106817 | None:intergenic | 45.0% |
| TTGCAAACCATGACAATCGG+TGG | - | chr3_1:85106931-85106950 | Msa0382480:CDS | 45.0% | |
| CTGAAAATCGACACGTAGCA+TGG | + | chr3_1:85106992-85107011 | None:intergenic | 45.0% | |
| GAGAATTATCCTCGTTCCCA+AGG | - | chr3_1:85107022-85107041 | Msa0382480:intron | 45.0% | |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr3_1:85107117-85107136 | Msa0382480:intron | 45.0% |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr3_1:85107118-85107137 | Msa0382480:intron | 45.0% |
| ACTTTCACACTCAAGCCATG+AGG | + | chr3_1:85107389-85107408 | None:intergenic | 45.0% | |
| TATCCCAAGAGATAAGGCCA+TGG | - | chr3_1:85107845-85107864 | Msa0382480:CDS | 45.0% | |
| TCACCAGGATGCTAATACCA+TGG | + | chr3_1:85107865-85107884 | None:intergenic | 45.0% | |
| TGGTATTAGCATCCTGGTGA+AGG | - | chr3_1:85107865-85107884 | Msa0382480:CDS | 45.0% | |
| GGTATTAGCATCCTGGTGAA+GGG | - | chr3_1:85107866-85107885 | Msa0382480:CDS | 45.0% | |
| TTGTGGTACTGTTAGGACGA+TGG | - | chr3_1:85107901-85107920 | Msa0382480:CDS | 45.0% | |
| CTTGATAAACAGGAAGTCGG+TGG | - | chr3_1:85108125-85108144 | Msa0382480:intron | 45.0% | |
| GTGAGATGCAGTGTATCATC+TGG | - | chr3_1:85108283-85108302 | Msa0382480:intron | 45.0% | |
| CTACTTGAACATAGCACCAC+TGG | + | chr3_1:85108329-85108348 | None:intergenic | 45.0% | |
| CTACATACACACAGCTTGAG+AGG | + | chr3_1:85108456-85108475 | None:intergenic | 45.0% | |
| CGTGGAATGATCTCCTTTGA+GGG | + | chr3_1:85109028-85109047 | None:intergenic | 45.0% | |
| CATTCCACGCACTCTTCTTT+AGG | - | chr3_1:85109039-85109058 | Msa0382480:CDS | 45.0% | |
| ! | ACTACCTAAAGAAGAGTGCG+TGG | + | chr3_1:85109046-85109065 | None:intergenic | 45.0% |
| AGCCAAGAAGTTGACAAGGA+TGG | - | chr3_1:85109140-85109159 | Msa0382480:CDS | 45.0% | |
| CTCCATCCTTGTCAACTTCT+TGG | + | chr3_1:85109145-85109164 | None:intergenic | 45.0% | |
| CAAGAAGTTGACAAGGATGG+AGG | - | chr3_1:85109143-85109162 | Msa0382480:CDS | 45.0% | |
| AGAAAGAGGAGCAGAAATGG+AGG | - | chr3_1:85109266-85109285 | Msa0382480:CDS | 45.0% | |
| !! | TAATTATTTAATTAATTAAC+GGG | + | chr3_1:85101683-85101702 | None:intergenic | 5.0% |
| !! | AAATAGTAATATTATTAAAT+TGG | + | chr3_1:85102667-85102686 | None:intergenic | 5.0% |
| !!! | TTATTAATTCTTTTTTTTTA+AGG | + | chr3_1:85104876-85104895 | None:intergenic | 5.0% |
| !!! | TTAATTTTATCATTATTAAT+AGG | - | chr3_1:85106744-85106763 | Msa0382480:CDS | 5.0% |
| !!! | AGGACTTTTTGGAGCCAACG+TGG | - | chr3_1:85100522-85100541 | Msa0382480:CDS | 50.0% |
| CAGGGAGTGATATGACTGCA+GGG | + | chr3_1:85100661-85100680 | None:intergenic | 50.0% | |
| GACCTCTGTGTCTTCAACCT+TGG | - | chr3_1:85100733-85100752 | Msa0382480:intron | 50.0% | |
| GTCCAAGGTTGAAGACACAG+AGG | + | chr3_1:85100738-85100757 | None:intergenic | 50.0% | |
| GGCAGACATGTTTGAGTCCA+AGG | + | chr3_1:85100753-85100772 | None:intergenic | 50.0% | |
| ATGTGTGTATAGGGACAGGG+TGG | - | chr3_1:85100872-85100891 | Msa0382480:intron | 50.0% | |
| AACGAATCCACAACAAGCGG+TGG | - | chr3_1:85101956-85101975 | Msa0382480:intron | 50.0% | |
| CAACGAAGTGAAAAGGCCTC+TGG | - | chr3_1:85102895-85102914 | Msa0382480:intron | 50.0% | |
| ACATCTAGAGGCCTAACCAC+TGG | - | chr3_1:85103698-85103717 | Msa0382480:intron | 50.0% | |
| CATCTAGAGGCCTAACCACT+GGG | - | chr3_1:85103699-85103718 | Msa0382480:intron | 50.0% | |
| CTGACGCAGATCTCGAGAAT+TGG | - | chr3_1:85105071-85105090 | Msa0382480:intron | 50.0% | |
| ! | GTGGCAACAGCTTGTTTGGT+AGG | + | chr3_1:85105739-85105758 | None:intergenic | 50.0% |
| CCTCTTTGCAAGGACACTAG+TGG | + | chr3_1:85105758-85105777 | None:intergenic | 50.0% | |
| CCACTAGTGTCCTTGCAAAG+AGG | - | chr3_1:85105755-85105774 | Msa0382480:intron | 50.0% | |
| CTAGTGTCCTTGCAAAGAGG+TGG | - | chr3_1:85105758-85105777 | Msa0382480:intron | 50.0% | |
| CCTCACCGTATGTAATCCCA+AGG | + | chr3_1:85105915-85105934 | None:intergenic | 50.0% | |
| CCTTGGGATTACATACGGTG+AGG | - | chr3_1:85105912-85105931 | Msa0382480:intron | 50.0% | |
| GCTTTCCCCATGTCGTCAAA+TGG | - | chr3_1:85105947-85105966 | Msa0382480:intron | 50.0% | |
| GGTTGACCCATTTGACGACA+TGG | + | chr3_1:85105957-85105976 | None:intergenic | 50.0% | |
| ACCCAGATTCGCTGAGATGA+AGG | + | chr3_1:85106149-85106168 | None:intergenic | 50.0% | |
| GTTGACGGCACTTCGTAATG+TGG | - | chr3_1:85106350-85106369 | Msa0382480:CDS | 50.0% | |
| TTGAGGTTCAAAGGCCTGCA+AGG | - | chr3_1:85106865-85106884 | Msa0382480:CDS | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr3_1:85107119-85107138 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr3_1:85107116-85107135 | Msa0382480:intron | 50.0% |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr3_1:85107122-85107141 | Msa0382480:intron | 50.0% | |
| AACAGTCTCATCATGTGGCG+TGG | + | chr3_1:85107813-85107832 | None:intergenic | 50.0% | |
| AGGCCATGGTATTAGCATCC+TGG | - | chr3_1:85107859-85107878 | Msa0382480:CDS | 50.0% | |
| GCGTGGAATGATCTCCTTTG+AGG | + | chr3_1:85109029-85109048 | None:intergenic | 50.0% | |
| ! | TGACAAGGATGGAGGTGCAA+AGG | - | chr3_1:85109151-85109170 | Msa0382480:CDS | 50.0% |
| GGAGTGATATGACTGCAGGG+TGG | + | chr3_1:85100658-85100677 | None:intergenic | 55.0% | |
| GCAGGGAGTGATATGACTGC+AGG | + | chr3_1:85100662-85100681 | None:intergenic | 55.0% | |
| TGTGTATAGGGACAGGGTGG+TGG | - | chr3_1:85100875-85100894 | Msa0382480:intron | 55.0% | |
| GTGTATAGGGACAGGGTGGT+GGG | - | chr3_1:85100876-85100895 | Msa0382480:intron | 55.0% | |
| TGTATAGGGACAGGGTGGTG+GGG | - | chr3_1:85100877-85100896 | Msa0382480:intron | 55.0% | |
| !! | GGTGGTGGGGAAGAACCAAA+AGG | - | chr3_1:85100890-85100909 | Msa0382480:intron | 55.0% |
| GGGGACCCATCTGACTCATA+TGG | + | chr3_1:85101911-85101930 | None:intergenic | 55.0% | |
| ! | TGAACTGCCACCGCTTGTTG+TGG | + | chr3_1:85101966-85101985 | None:intergenic | 55.0% |
| TGTGCATGCACTCTCACCAG+AGG | + | chr3_1:85102914-85102933 | None:intergenic | 55.0% | |
| GGACTCGCTGAAGCGAAAAC+AGG | + | chr3_1:85105848-85105867 | None:intergenic | 55.0% | |
| CCATCAGAAGCTCACCTTGC+AGG | + | chr3_1:85106882-85106901 | None:intergenic | 55.0% | |
| CCTGCAAGGTGAGCTTCTGA+TGG | - | chr3_1:85106879-85106898 | Msa0382480:CDS | 55.0% | |
| ! | CGAAGGTCCACCGATTGTCA+TGG | + | chr3_1:85106941-85106960 | None:intergenic | 55.0% |
| GACATGTAGCAGAGGCCCTT+GGG | + | chr3_1:85107041-85107060 | None:intergenic | 55.0% | |
| TGACATGTAGCAGAGGCCCT+TGG | + | chr3_1:85107042-85107061 | None:intergenic | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr3_1:85107124-85107143 | None:intergenic | 55.0% | |
| GAAAGCCGACCCCACTTAGT+GGG | + | chr3_1:85107130-85107149 | None:intergenic | 55.0% | |
| AGAAAGCCGACCCCACTTAG+TGG | + | chr3_1:85107131-85107150 | None:intergenic | 55.0% | |
| ATCCTTAAGATTCGCCGCCC+TGG | - | chr3_1:85107266-85107285 | Msa0382480:intron | 55.0% | |
| GTCGAAGAAACAGGCTGCCA+GGG | + | chr3_1:85107286-85107305 | None:intergenic | 55.0% | |
| AGTCGAAGAAACAGGCTGCC+AGG | + | chr3_1:85107287-85107306 | None:intergenic | 55.0% | |
| CTCAGGCATAAGGTAAGGCC+AGG | - | chr3_1:85107782-85107801 | Msa0382480:CDS | 55.0% | |
| ! | AGGATGGAGGTGCAAAGGTG+AGG | - | chr3_1:85109156-85109175 | Msa0382480:CDS | 55.0% |
| GCAGCGACGAATCTACGGCA+GGG | + | chr3_1:85100679-85100698 | None:intergenic | 60.0% | |
| TGCCGTAGATTCGTCGCTGC+CGG | - | chr3_1:85100679-85100698 | Msa0382480:intron | 60.0% | |
| TCCCGGCAGCGACGAATCTA+CGG | + | chr3_1:85100684-85100703 | None:intergenic | 60.0% | |
| GAGGCCTAACCACTGGGACT+AGG | - | chr3_1:85103705-85103724 | Msa0382480:intron | 60.0% | |
| TGCCAGGGCGGCGAATCTTA+AGG | + | chr3_1:85107271-85107290 | None:intergenic | 60.0% | |
| GAAGAAACAGGCTGCCAGGG+CGG | + | chr3_1:85107283-85107302 | None:intergenic | 60.0% | |
| TCTCATCATGTGGCGTGGCG+TGG | + | chr3_1:85107808-85107827 | None:intergenic | 60.0% | |
| GGCAGCGACGAATCTACGGC+AGG | + | chr3_1:85100680-85100699 | None:intergenic | 65.0% | |
| GCCGTAGATTCGTCGCTGCC+GGG | - | chr3_1:85100680-85100699 | Msa0382480:intron | 65.0% | |
| ACACGTAGCATGGGCCCAGG+AGG | + | chr3_1:85106982-85107001 | None:intergenic | 65.0% | |
| TCGACACGTAGCATGGGCCC+AGG | + | chr3_1:85106985-85107004 | None:intergenic | 65.0% | |
| AGCAGAGGCCCTTGGGAACG+AGG | + | chr3_1:85107034-85107053 | None:intergenic | 65.0% | |
| TTCCTGTCTGCGCAGCAGCC+AGG | - | chr3_1:85108067-85108086 | Msa0382480:intron | 65.0% | |
| !! | CACAGCTTGAGAGGGCGTCG+TGG | + | chr3_1:85108447-85108466 | None:intergenic | 65.0% |
| TCATGTGGCGTGGCGTGGCC+TGG | + | chr3_1:85107803-85107822 | None:intergenic | 70.0% | |
| GGCCTGGCTGCTGCGCAGAC+AGG | + | chr3_1:85108072-85108091 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 85100436 | 85109309 | 85100436 | ID=Msa0382480;Name=Msa0382480 |
| chr3_1 | mRNA | 85100436 | 85109309 | 85100436 | ID=Msa0382480-mRNA-1;Parent=Msa0382480;Name=Msa0382480-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0.25|0|1|0.75|0.8|5|0|648 |
| chr3_1 | exon | 85108950 | 85109309 | 85108950 | ID=Msa0382480-mRNA-1:exon:22292;Parent=Msa0382480-mRNA-1 |
| chr3_1 | exon | 85108703 | 85108861 | 85108703 | ID=Msa0382480-mRNA-1:exon:22291;Parent=Msa0382480-mRNA-1 |
| chr3_1 | exon | 85107610 | 85108008 | 85107610 | ID=Msa0382480-mRNA-1:exon:22290;Parent=Msa0382480-mRNA-1 |
| chr3_1 | exon | 85106100 | 85106976 | 85106100 | ID=Msa0382480-mRNA-1:exon:22289;Parent=Msa0382480-mRNA-1 |
| chr3_1 | exon | 85100436 | 85100587 | 85100436 | ID=Msa0382480-mRNA-1:exon:22288;Parent=Msa0382480-mRNA-1 |
| chr3_1 | CDS | 85108950 | 85109309 | 85108950 | ID=Msa0382480-mRNA-1:cds;Parent=Msa0382480-mRNA-1 |
| chr3_1 | CDS | 85108703 | 85108861 | 85108703 | ID=Msa0382480-mRNA-1:cds;Parent=Msa0382480-mRNA-1 |
| chr3_1 | CDS | 85107610 | 85108008 | 85107610 | ID=Msa0382480-mRNA-1:cds;Parent=Msa0382480-mRNA-1 |
| chr3_1 | CDS | 85106100 | 85106976 | 85106100 | ID=Msa0382480-mRNA-1:cds;Parent=Msa0382480-mRNA-1 |
| chr3_1 | CDS | 85100436 | 85100587 | 85100436 | ID=Msa0382480-mRNA-1:cds;Parent=Msa0382480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
