Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0521380 | XP_003603391.1 | 89.952 | 627 | 41 | 6 | 1 | 613 | 1 | 619 | 0.0 | 1048 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0521380 | G7JB14 | 89.952 | 627 | 41 | 6 | 1 | 613 | 1 | 619 | 0.0 | 1048 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000820 | Msa0521380 | 0.800326 | 1.518619e-48 | -8.615850e-47 |
| Msa0026420 | Msa0521380 | 0.801517 | 8.676190e-49 | -8.615850e-47 |
| Msa0033140 | Msa0521380 | 0.813973 | 1.951948e-51 | -8.615850e-47 |
| Msa0037180 | Msa0521380 | 0.804057 | 2.593600e-49 | -8.615850e-47 |
| Msa0051480 | Msa0521380 | 0.804315 | 2.291851e-49 | -8.615850e-47 |
| Msa0146200 | Msa0521380 | 0.807390 | 5.174051e-50 | -8.615850e-47 |
| Msa0150620 | Msa0521380 | 0.800751 | 1.244533e-48 | -8.615850e-47 |
| Msa0155510 | Msa0521380 | 0.808081 | 3.690269e-50 | -8.615850e-47 |
| Msa0162680 | Msa0521380 | 0.830494 | 2.844803e-55 | -8.615850e-47 |
| Msa0177320 | Msa0521380 | 0.815027 | 1.140760e-51 | -8.615850e-47 |
| Msa0216150 | Msa0521380 | -0.812346 | 4.441064e-51 | -8.615850e-47 |
| Msa0382480 | Msa0521380 | 0.926853 | 2.646714e-91 | -8.615850e-47 |
| Msa0390170 | Msa0521380 | 0.823338 | 1.461482e-53 | -8.615850e-47 |
| Msa0393100 | Msa0521380 | 0.841739 | 3.959097e-58 | -8.615850e-47 |
| Msa0402800 | Msa0521380 | 0.856745 | 2.614248e-62 | -8.615850e-47 |
| Msa0427560 | Msa0521380 | 0.838929 | 2.146621e-57 | -8.615850e-47 |
| Msa0432660 | Msa0521380 | 0.853608 | 2.135972e-61 | -8.615850e-47 |
| Msa0438070 | Msa0521380 | 0.801774 | 7.681892e-49 | -8.615850e-47 |
| Msa0449620 | Msa0521380 | 0.807289 | 5.436862e-50 | -8.615850e-47 |
| Msa0481770 | Msa0521380 | 0.832372 | 9.816081e-56 | -8.615850e-47 |
| Msa0246140 | Msa0521380 | 0.801307 | 9.577871e-49 | -8.615850e-47 |
| Msa0254640 | Msa0521380 | 0.818610 | 1.791769e-52 | -8.615850e-47 |
| Msa0284730 | Msa0521380 | 0.810552 | 1.088880e-50 | -8.615850e-47 |
| Msa0319680 | Msa0521380 | 0.818530 | 1.868725e-52 | -8.615850e-47 |
| Msa0332360 | Msa0521380 | 0.818468 | 1.929582e-52 | -8.615850e-47 |
| Msa0345980 | Msa0521380 | 0.812089 | 5.051141e-51 | -8.615850e-47 |
| Msa0488580 | Msa0521380 | 0.833082 | 6.539938e-56 | -8.615850e-47 |
| Msa0497860 | Msa0521380 | 0.840848 | 6.790856e-58 | -8.615850e-47 |
| Msa0518190 | Msa0521380 | 0.821846 | 3.249654e-53 | -8.615850e-47 |
| Msa0521380 | Msa0565180 | 0.808782 | 2.615346e-50 | -8.615850e-47 |
| Msa0521380 | Msa0657340 | 0.818908 | 1.533219e-52 | -8.615850e-47 |
| Msa0521380 | Msa0660650 | 0.840556 | 8.100455e-58 | -8.615850e-47 |
| Msa0521380 | Msa0816630 | 0.817089 | 3.951063e-52 | -8.615850e-47 |
| Msa0521380 | Msa0863940 | 0.812715 | 3.687916e-51 | -8.615850e-47 |
| Msa0521380 | Msa0873940 | 0.812789 | 3.552197e-51 | -8.615850e-47 |
| Msa0521380 | Msa0906680 | 0.810184 | 1.307595e-50 | -8.615850e-47 |
| Msa0521380 | Msa0921790 | 0.820296 | 7.392844e-53 | -8.615850e-47 |
| Msa0521380 | Msa0960580 | 0.803737 | 3.022564e-49 | -8.615850e-47 |
| Msa0521380 | Msa1025750 | 0.804891 | 1.737412e-49 | -8.615850e-47 |
| Msa0521380 | Msa1030210 | 0.807693 | 4.462302e-50 | -8.615850e-47 |
| Msa0521380 | Msa1041250 | 0.806077 | 9.802150e-50 | -8.615850e-47 |
| Msa0521380 | Msa1064510 | 0.822228 | 2.650330e-53 | -8.615850e-47 |
| Msa0521380 | Msa1069250 | 0.803965 | 2.709560e-49 | -8.615850e-47 |
| Msa0521380 | Msa1075090 | 0.804314 | 2.292069e-49 | -8.615850e-47 |
| Msa0521380 | Msa1095590 | 0.803512 | 3.364479e-49 | -8.615850e-47 |
| Msa0521380 | Msa1165670 | 0.803466 | 3.439037e-49 | -8.615850e-47 |
| Msa0521380 | Msa1174280 | 0.825895 | 3.652411e-54 | -8.615850e-47 |
| Msa0521380 | Msa1211610 | 0.809929 | 1.484101e-50 | -8.615850e-47 |
| Msa0521380 | Msa1299480 | 0.811028 | 8.593279e-51 | -8.615850e-47 |
| Msa0521380 | Msa1359770 | 0.805279 | 1.441323e-49 | -8.615850e-47 |
| Msa0521380 | Msa1361710 | 0.804324 | 2.282137e-49 | -8.615850e-47 |
| Msa0521380 | Msa1369320 | 0.826751 | 2.284350e-54 | -8.615850e-47 |
| Msa0521380 | Msa1377050 | 0.803399 | 3.551946e-49 | -8.615850e-47 |
| Msa0521380 | Msa1401110 | 0.813703 | 2.238087e-51 | -8.615850e-47 |
| Msa0521380 | Msa1412470 | 0.843971 | 1.008808e-58 | -8.615850e-47 |
| Msa0521380 | Msa1422230 | 0.816360 | 5.757029e-52 | -8.615850e-47 |
| Msa0521380 | Msa1427000 | 0.802553 | 5.311203e-49 | -8.615850e-47 |
| Msa0521380 | Msa1436090 | 0.800262 | 1.564826e-48 | -8.615850e-47 |
| Msa0521380 | Msa1453600 | 0.833348 | 5.615971e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0521380 | MtrunA17_Chr3g0137731 | 89.952 | 627 | 41 | 6 | 1 | 613 | 1 | 619 | 0.0 | 1048 |
| Msa0521380 | MtrunA17_Chr1g0176961 | 50.311 | 322 | 116 | 5 | 314 | 597 | 419 | 734 | 1.90e-101 | 325 |
| Msa0521380 | MtrunA17_Chr7g0267631 | 47.649 | 319 | 129 | 6 | 314 | 601 | 408 | 719 | 1.08e-86 | 285 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0521380 | AT2G25460.2 | 37.912 | 546 | 260 | 16 | 65 | 590 | 52 | 538 | 3.99e-96 | 305 |
| Msa0521380 | AT3G11760.1 | 51.389 | 288 | 123 | 4 | 314 | 593 | 417 | 695 | 1.85e-95 | 308 |
| Msa0521380 | AT5G04860.2 | 45.556 | 360 | 157 | 8 | 275 | 603 | 236 | 587 | 1.11e-90 | 293 |
| Msa0521380 | AT5G04860.1 | 45.833 | 360 | 156 | 8 | 275 | 603 | 387 | 738 | 5.31e-89 | 293 |
| Msa0521380 | AT2G10560.1 | 42.562 | 242 | 106 | 7 | 387 | 603 | 1 | 234 | 8.49e-53 | 182 |
| Msa0521380 | AT2G25460.1 | 34.653 | 404 | 209 | 13 | 65 | 449 | 52 | 419 | 7.28e-51 | 181 |
Find 118 sgRNAs with CRISPR-Local
Find 205 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAAGGAAATTCAAGTAAA+TGG | 0.143807 | 3_4:-74161693 | Msa0521380:CDS |
| GTCCTAACTCAAGCTTTAAT+TGG | 0.206060 | 3_4:+74163973 | None:intergenic |
| CAACTAACTATGTAAATTCT+TGG | 0.246132 | 3_4:+74161217 | None:intergenic |
| AAACACGGGACTATAGAAAA+AGG | 0.282626 | 3_4:-74162656 | Msa0521380:CDS |
| CTTGTCTTTGTCCCTGAACT+TGG | 0.295468 | 3_4:+74162455 | None:intergenic |
| TCTAAATCAAAATGTTTATC+TGG | 0.298751 | 3_4:+74161421 | None:intergenic |
| GGAAAACTCCTTCTCACGTT+TGG | 0.315799 | 3_4:-74163776 | Msa0521380:CDS |
| TAAAGATGAAGAAGTTAATA+AGG | 0.320412 | 3_4:-74161053 | Msa0521380:CDS |
| TTACTATATCATTGATTCAT+TGG | 0.323701 | 3_4:-74161155 | Msa0521380:CDS |
| GAGAAGTTTCATTGCTTAGA+AGG | 0.338959 | 3_4:-74161325 | Msa0521380:CDS |
| CTTTATTACAGGTTTGTCTA+AGG | 0.339470 | 3_4:-74162751 | Msa0521380:intron |
| TTGGTATACCTTGATTTGTA+TGG | 0.347267 | 3_4:+74161530 | None:intergenic |
| TTGAGAAAGAGGAGAAGAAA+TGG | 0.356522 | 3_4:-74160913 | Msa0521380:CDS |
| TACTATATCATTGATTCATT+GGG | 0.366292 | 3_4:-74161154 | Msa0521380:CDS |
| GAAGATGTGGAAGAGGATAA+AGG | 0.367369 | 3_4:+74160833 | None:intergenic |
| GAAAACTCCTTCTCACGTTT+GGG | 0.368015 | 3_4:-74163775 | Msa0521380:CDS |
| TTCAGGGACAAAGACAAGTT+TGG | 0.368520 | 3_4:-74162450 | Msa0521380:CDS |
| AATCATCGAAGCTACCCTTT+TGG | 0.370953 | 3_4:-74163456 | Msa0521380:intron |
| AACAACTAAAGGTCTCAAAT+TGG | 0.378951 | 3_4:+74161384 | None:intergenic |
| TTCAAAGGAAGCTTCCTATA+CGG | 0.379927 | 3_4:-74163496 | Msa0521380:CDS |
| CTTAATCCATGTTATTTCAA+TGG | 0.385132 | 3_4:+74163908 | None:intergenic |
| TGCCGTAGATTCGTCGCTGC+CGG | 0.386738 | 3_4:-74163798 | Msa0521380:CDS |
| CAAGAATTTACATAGTTAGT+TGG | 0.387389 | 3_4:-74161216 | Msa0521380:CDS |
| GACCTCTGTGTCTTCAACCT+TGG | 0.397971 | 3_4:-74163744 | Msa0521380:CDS |
| CTTCCTTTGAACATTGGATT+CGG | 0.408918 | 3_4:+74163508 | None:intergenic |
| TCTCTAAGATCAAACCTTCA+AGG | 0.409683 | 3_4:-74161709 | Msa0521380:CDS |
| ATTTACTTGAATTTCCTTGA+AGG | 0.411143 | 3_4:+74161695 | None:intergenic |
| GATGATTCATGTGTGATGTA+TGG | 0.412386 | 3_4:-74161085 | Msa0521380:CDS |
| TCTAAGCAATGAAACTTCTC+AGG | 0.424509 | 3_4:+74161328 | None:intergenic |
| TGTGTATAGGGACAGGGTGG+TGG | 0.426747 | 3_4:-74163602 | Msa0521380:intron |
| GGAAGAACCAAAAGGTAAAA+TGG | 0.433515 | 3_4:-74163579 | Msa0521380:CDS |
| CAAGTTTGGATATCAATAGA+AGG | 0.433928 | 3_4:-74162436 | Msa0521380:CDS |
| AACCAATTAAAGCTTGAGTT+AGG | 0.434343 | 3_4:-74163975 | Msa0521380:CDS |
| GATGAAGAAGTTAATAAGGA+TGG | 0.435976 | 3_4:-74161049 | Msa0521380:CDS |
| TCAAGGAAATTCAAGTAAAT+GGG | 0.436962 | 3_4:-74161692 | Msa0521380:CDS |
| AATCCATCATACTCCTTTCA+CGG | 0.437364 | 3_4:-74162363 | Msa0521380:intron |
| GTCTAAGGTTATTGAAGCAC+AGG | 0.440478 | 3_4:-74162736 | Msa0521380:CDS |
| CCTATACGGTTGAAGGTCAA+TGG | 0.445443 | 3_4:-74163482 | Msa0521380:CDS |
| GGGGACCCATCTGACTCATA+TGG | 0.466820 | 3_4:+74162569 | None:intergenic |
| GAAAATCAATCTGCAATTGC+CGG | 0.467500 | 3_4:+74160867 | None:intergenic |
| AGTTAGACAACTTGAGAAAG+AGG | 0.469446 | 3_4:-74160924 | Msa0521380:CDS |
| GAAGCTTCCTATACGGTTGA+AGG | 0.474253 | 3_4:-74163489 | Msa0521380:CDS |
| GTGTATAGGGACAGGGTGGT+GGG | 0.476052 | 3_4:-74163601 | Msa0521380:intron |
| CACTGGCTCCATACAAATCA+AGG | 0.476684 | 3_4:-74161538 | Msa0521380:CDS |
| GGATATCAATAGAAGGTTCA+AGG | 0.483015 | 3_4:-74162429 | Msa0521380:CDS |
| TCACACAAGGTTCATCTGAA+TGG | 0.483310 | 3_4:-74161483 | Msa0521380:CDS |
| CCATTGACCTTCAACCGTAT+AGG | 0.487380 | 3_4:+74163482 | None:intergenic |
| AGGAAGCTTCCTTTGAACAT+TGG | 0.488002 | 3_4:+74163502 | None:intergenic |
| AAAGTAACTCTTGACTCTGT+GGG | 0.490195 | 3_4:+74162479 | None:intergenic |
| GCCGTAGATTCGTCGCTGCC+GGG | 0.491896 | 3_4:-74163797 | Msa0521380:CDS |
| TTGTCAAATTGAGTTCTTGT+TGG | 0.492779 | 3_4:+74161511 | None:intergenic |
| TGCAATTGCCGGTGAAGATA+AGG | 0.492998 | 3_4:+74160878 | None:intergenic |
| CTTTGATCAACGAAGTGAAA+AGG | 0.494079 | 3_4:-74161605 | Msa0521380:CDS |
| GGCAGACATGTTTGAGTCCA+AGG | 0.501776 | 3_4:+74163727 | None:intergenic |
| TTTCAAATCCTTATCTTCAC+CGG | 0.501952 | 3_4:-74160886 | Msa0521380:CDS |
| ATGAAGAAGTTAATAAGGAT+GGG | 0.505362 | 3_4:-74161048 | Msa0521380:CDS |
| TCCCGGCAGCGACGAATCTA+CGG | 0.508314 | 3_4:+74163796 | None:intergenic |
| TTCTGAGGCAGAACAACTAA+AGG | 0.508890 | 3_4:+74161373 | None:intergenic |
| TGAACTGCCACCGCTTGTTG+TGG | 0.511778 | 3_4:+74162514 | None:intergenic |
| TGTATAGGGACAGGGTGGTG+GGG | 0.520486 | 3_4:-74163600 | Msa0521380:intron |
| GATATCAATAGAAGGTTCAA+GGG | 0.528253 | 3_4:-74162428 | Msa0521380:CDS |
| GCAGGGAGTGATATGACTGC+AGG | 0.531153 | 3_4:+74163818 | None:intergenic |
| GGCAGCGACGAATCTACGGC+AGG | 0.532444 | 3_4:+74163800 | None:intergenic |
| ATGATTCATGTGTGATGTAT+GGG | 0.535106 | 3_4:-74161084 | Msa0521380:CDS |
| TAGAATTGACATACCGTGAA+AGG | 0.538980 | 3_4:+74162350 | None:intergenic |
| CAACATCCATATGAGTCAGA+TGG | 0.542549 | 3_4:-74162575 | Msa0521380:CDS |
| CAACATAGAAGATGTGGAAG+AGG | 0.543261 | 3_4:+74160826 | None:intergenic |
| AATTAGCCATTGAAATAACA+TGG | 0.543511 | 3_4:-74163914 | Msa0521380:CDS |
| GAAATACAACATAGAAGATG+TGG | 0.546990 | 3_4:+74160820 | None:intergenic |
| CAACGAAGTGAAAAGGCCTC+TGG | 0.548675 | 3_4:-74161598 | Msa0521380:CDS |
| AAGAATGGAGCGTACCAAAA+GGG | 0.552626 | 3_4:+74163442 | None:intergenic |
| TGAAGAAGTTAATAAGGATG+GGG | 0.560236 | 3_4:-74161047 | Msa0521380:CDS |
| AACAATGTGAAGTTTGATGA+AGG | 0.564539 | 3_4:-74162605 | Msa0521380:CDS |
| ATACCGTGAAAGGAGTATGA+TGG | 0.566245 | 3_4:+74162360 | None:intergenic |
| CAATAGAAGGTTCAAGGGGT+GGG | 0.566587 | 3_4:-74162423 | Msa0521380:CDS |
| AGCAATAACCTTTGAAAACA+CGG | 0.571826 | 3_4:-74162693 | Msa0521380:CDS |
| AACATCCATATGAGTCAGAT+GGG | 0.577022 | 3_4:-74162574 | Msa0521380:CDS |
| TCAATAGAAGGTTCAAGGGG+TGG | 0.579144 | 3_4:-74162424 | Msa0521380:CDS |
| TGATTGTCCCAAACGTGAGA+AGG | 0.581864 | 3_4:+74163768 | None:intergenic |
| TAGTTGCACTAATATCTCAC+TGG | 0.582311 | 3_4:-74161555 | Msa0521380:CDS |
| ACCAAAAGGTAAAATGGTGG+TGG | 0.584450 | 3_4:-74163573 | Msa0521380:CDS |
| CTAAGCAATGAAACTTCTCA+GGG | 0.586124 | 3_4:+74161329 | None:intergenic |
| TGTAGAAGTTTCTAATTGAG+CGG | 0.593072 | 3_4:+74162385 | None:intergenic |
| AGACCGAATCCAATGTTCAA+AGG | 0.597972 | 3_4:-74163511 | Msa0521380:CDS |
| AGTTTGTATGACTCTAGCGA+TGG | 0.605787 | 3_4:-74163543 | Msa0521380:CDS |
| TTGTATGACTCTAGCGATGG+AGG | 0.606457 | 3_4:-74163540 | Msa0521380:CDS |
| AAAGGTAAAATGGTGGTGGT+CGG | 0.616409 | 3_4:-74163569 | Msa0521380:CDS |
| GACTCATCAGAGTCAAACAC+AGG | 0.617667 | 3_4:+74162548 | None:intergenic |
| GGTGGTGGGGAAGAACCAAA+AGG | 0.617941 | 3_4:-74163587 | Msa0521380:CDS |
| AAAAGTAACTCTTGACTCTG+TGG | 0.625814 | 3_4:+74162478 | None:intergenic |
| GAAGAAGTTAATAAGGATGG+GGG | 0.628518 | 3_4:-74161046 | Msa0521380:CDS |
| AAACCTGTGTATGATTTCTG+AGG | 0.630083 | 3_4:+74161358 | None:intergenic |
| AAGCAACAAGCACACAGTGA+AGG | 0.638338 | 3_4:-74164000 | Msa0521380:CDS |
| GTTTACAGTAGTTGCCACGT+TGG | 0.640878 | 3_4:+74163941 | None:intergenic |
| CAGATGAACCTTGTGTGATG+AGG | 0.645553 | 3_4:+74161488 | None:intergenic |
| TTTGACAACCTCATCACACA+AGG | 0.646349 | 3_4:-74161496 | Msa0521380:CDS |
| CAGGGAGTGATATGACTGCA+GGG | 0.648373 | 3_4:+74163819 | None:intergenic |
| GCAGCGACGAATCTACGGCA+GGG | 0.650761 | 3_4:+74163801 | None:intergenic |
| GATGATGAAGAAGTGGTGGT+TGG | 0.653699 | 3_4:-74164033 | Msa0521380:CDS |
| TGGCGATGATGATGAAGAAG+TGG | 0.658060 | 3_4:-74164040 | Msa0521380:CDS |
| AACGAATCCACAACAAGCGG+TGG | 0.661870 | 3_4:-74162521 | Msa0521380:CDS |
| GGTGCAAAGAGTAGTTCAAG+AGG | 0.665895 | 3_4:-74161025 | Msa0521380:CDS |
| CTGCCTCAGAAATCATACAC+AGG | 0.669234 | 3_4:-74161361 | Msa0521380:CDS |
| CGATGATGATGAAGAAGTGG+TGG | 0.671516 | 3_4:-74164037 | Msa0521380:CDS |
| TAAAGTCAGATAAGAAACAC+GGG | 0.683630 | 3_4:-74162670 | Msa0521380:CDS |
| AAGTAACTCTTGACTCTGTG+GGG | 0.684551 | 3_4:+74162480 | None:intergenic |
| TCGAACGAATCCACAACAAG+CGG | 0.686566 | 3_4:-74162524 | Msa0521380:CDS |
| TGTGCATGCACTCTCACCAG+AGG | 0.687640 | 3_4:+74161582 | None:intergenic |
| ACTCATCAGAGTCAAACACA+GGG | 0.693622 | 3_4:+74162549 | None:intergenic |
| ATATCAATAGAAGGTTCAAG+GGG | 0.705222 | 3_4:-74162427 | Msa0521380:CDS |
| GTAAAGTCAGATAAGAAACA+CGG | 0.708686 | 3_4:-74162671 | Msa0521380:CDS |
| AGAACCAAAAGGTAAAATGG+TGG | 0.711514 | 3_4:-74163576 | Msa0521380:CDS |
| ACTATGTGTGTATAGGGACA+GGG | 0.728676 | 3_4:-74163608 | Msa0521380:intron |
| ATGTGTGTATAGGGACAGGG+TGG | 0.746193 | 3_4:-74163605 | Msa0521380:intron |
| TAAGCAATGAAACTTCTCAG+GGG | 0.754329 | 3_4:+74161330 | None:intergenic |
| GTCCAAGGTTGAAGACACAG+AGG | 0.758408 | 3_4:+74163742 | None:intergenic |
| GGAGTGATATGACTGCAGGG+TGG | 0.776711 | 3_4:+74163822 | None:intergenic |
| CTCATCAGAGTCAAACACAG+GGG | 0.787704 | 3_4:+74162550 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATTATTTAATTAATTAA+CGG | + | chr3_4:74162041-74162060 | None:intergenic | 0.0% |
| !!! | AAATAATTAATTTTTAACGA+AGG | - | chr3_4:74162051-74162070 | Msa0521380:intron | 10.0% |
| !! | TTTAAAAAATTCAATATTCA+AGG | + | chr3_4:74162679-74162698 | None:intergenic | 10.0% |
| !! | GATTTATGAACATAAATAAT+AGG | - | chr3_4:74161732-74161751 | Msa0521380:intron | 15.0% |
| !!! | AAATAGTTTTCTTCAAAAAA+AGG | + | chr3_4:74162654-74162673 | None:intergenic | 15.0% |
| !!! | AATTATTTCTTTATCATTAG+CGG | - | chr3_4:74162717-74162736 | Msa0521380:CDS | 15.0% |
| !!! | TAATTTTCTTGATTTAGTTT+AGG | - | chr3_4:74163033-74163052 | Msa0521380:intron | 15.0% |
| !!! | AATTTTCTTGATTTAGTTTA+GGG | - | chr3_4:74163034-74163053 | Msa0521380:intron | 15.0% |
| !! | TAATGTCTTATATGTAAGAT+AGG | - | chr3_4:74161140-74161159 | Msa0521380:CDS | 20.0% |
| !! | TATAGTAATGAAGAAAAGAA+TGG | + | chr3_4:74161410-74161429 | None:intergenic | 20.0% |
| !! | TTGCTTTCTCATTTATTAAT+TGG | - | chr3_4:74161449-74161468 | Msa0521380:CDS | 20.0% |
| !!! | ATATATTTTAGTACGAAACA+TGG | + | chr3_4:74161540-74161559 | None:intergenic | 20.0% |
| !! | GAATGAATTGATTAATTACA+TGG | - | chr3_4:74161578-74161597 | Msa0521380:CDS | 20.0% |
| !! | TTATGAACATAAATAATAGG+TGG | - | chr3_4:74161735-74161754 | Msa0521380:intron | 20.0% |
| !! | ACATTGATCTGATAAATATA+TGG | + | chr3_4:74161810-74161829 | None:intergenic | 20.0% |
| !!! | TTTTGCAAACAATTGATTTT+TGG | + | chr3_4:74161999-74162018 | None:intergenic | 20.0% |
| !!! | ATTATTTCTTTATCATTAGC+GGG | - | chr3_4:74162718-74162737 | Msa0521380:CDS | 20.0% |
| !! | TAAACATGAGTTCATAAATA+AGG | - | chr3_4:74162882-74162901 | Msa0521380:intron | 20.0% |
| !!! | ATTTTCTTGATTTAGTTTAG+GGG | - | chr3_4:74163035-74163054 | Msa0521380:intron | 20.0% |
| !!! | AAATATATTTTAAGCAGAGA+TGG | - | chr3_4:74163170-74163189 | Msa0521380:intron | 20.0% |
| !! | TCTAAATCAAAATGTTTATC+TGG | + | chr3_4:74163416-74163435 | None:intergenic | 20.0% |
| !!! | TGATCATTTCTTTATTTTGA+AGG | - | chr3_4:74163643-74163662 | Msa0521380:intron | 20.0% |
| !!! | TTACTATATCATTGATTCAT+TGG | - | chr3_4:74163679-74163698 | Msa0521380:intron | 20.0% |
| !!! | TACTATATCATTGATTCATT+GGG | - | chr3_4:74163680-74163699 | Msa0521380:intron | 20.0% |
| !! | TAAAGATGAAGAAGTTAATA+AGG | - | chr3_4:74163781-74163800 | Msa0521380:CDS | 20.0% |
| ! | AATTAGCCATTGAAATAACA+TGG | - | chr3_4:74160920-74160939 | Msa0521380:CDS | 25.0% |
| !!! | CTTAATCCATGTTATTTCAA+TGG | + | chr3_4:74160929-74160948 | None:intergenic | 25.0% |
| !!! | GATTTTTAAGATGGATATGA+AGG | + | chr3_4:74161615-74161634 | None:intergenic | 25.0% |
| ! | CATATCCATCTTAAAAATCA+TGG | - | chr3_4:74161616-74161635 | Msa0521380:CDS | 25.0% |
| ! | TAAATCAAGCAGAATAATGT+TGG | + | chr3_4:74161718-74161737 | None:intergenic | 25.0% |
| !! | ATTTGTTAGTCATCTGTTAT+CGG | + | chr3_4:74161776-74161795 | None:intergenic | 25.0% |
| ! | TAAAACTACACAAATCTTAG+TGG | + | chr3_4:74161904-74161923 | None:intergenic | 25.0% |
| !! | TTTAATTAATTAACGGGTGT+TGG | + | chr3_4:74162034-74162053 | None:intergenic | 25.0% |
| ! | AGTTACAAAGAAACAAAGTA+GGG | + | chr3_4:74162555-74162574 | None:intergenic | 25.0% |
| ! | TAGTTACAAAGAAACAAAGT+AGG | + | chr3_4:74162556-74162575 | None:intergenic | 25.0% |
| ! | TATTAGTCCTTTGTCAAAAA+AGG | - | chr3_4:74162609-74162628 | Msa0521380:CDS | 25.0% |
| !!! | TTTTCTTGATTTAGTTTAGG+GGG | - | chr3_4:74163036-74163055 | Msa0521380:intron | 25.0% |
| ! | ATTTACTTGAATTTCCTTGA+AGG | + | chr3_4:74163142-74163161 | None:intergenic | 25.0% |
| ! | TTCAAGGAAATTCAAGTAAA+TGG | - | chr3_4:74163141-74163160 | Msa0521380:intron | 25.0% |
| ! | TCAAGGAAATTCAAGTAAAT+GGG | - | chr3_4:74163142-74163161 | Msa0521380:intron | 25.0% |
| !! | CTATGTCTTTTGATGAAATA+TGG | - | chr3_4:74163534-74163553 | Msa0521380:CDS | 25.0% |
| ! | CAACTAACTATGTAAATTCT+TGG | + | chr3_4:74163620-74163639 | None:intergenic | 25.0% |
| ! | CAAGAATTTACATAGTTAGT+TGG | - | chr3_4:74163618-74163637 | Msa0521380:intron | 25.0% |
| !!! | TTTCTTTATTTTGAAGGTAG+AGG | - | chr3_4:74163649-74163668 | Msa0521380:intron | 25.0% |
| ! | ATGAAGAAGTTAATAAGGAT+GGG | - | chr3_4:74163786-74163805 | Msa0521380:CDS | 25.0% |
| AACCAATTAAAGCTTGAGTT+AGG | - | chr3_4:74160859-74160878 | Msa0521380:CDS | 30.0% | |
| ATAAGACATTAAATGTGACG+TGG | + | chr3_4:74161131-74161150 | None:intergenic | 30.0% | |
| ! | ATGTGTTACTATGTGTGTAT+AGG | - | chr3_4:74161219-74161238 | Msa0521380:CDS | 30.0% |
| ! | TGTGTTACTATGTGTGTATA+GGG | - | chr3_4:74161220-74161239 | Msa0521380:CDS | 30.0% |
| !! | CTCAACCATGATTTTTAAGA+TGG | + | chr3_4:74161624-74161643 | None:intergenic | 30.0% |
| TTTGTTAGTCATCTGTTATC+GGG | + | chr3_4:74161775-74161794 | None:intergenic | 30.0% | |
| ATCAATTGTTTGCAAAAGCA+AGG | - | chr3_4:74162002-74162021 | Msa0521380:intron | 30.0% | |
| GGTGAGTAATACTTTATTAC+AGG | - | chr3_4:74162072-74162091 | Msa0521380:intron | 30.0% | |
| CTTTATTACAGGTTTGTCTA+AGG | - | chr3_4:74162083-74162102 | Msa0521380:intron | 30.0% | |
| ! | AGCAATAACCTTTGAAAACA+CGG | - | chr3_4:74162141-74162160 | Msa0521380:intron | 30.0% |
| GTAAAGTCAGATAAGAAACA+CGG | - | chr3_4:74162163-74162182 | Msa0521380:intron | 30.0% | |
| TAAAGTCAGATAAGAAACAC+GGG | - | chr3_4:74162164-74162183 | Msa0521380:intron | 30.0% | |
| AACAATGTGAAGTTTGATGA+AGG | - | chr3_4:74162229-74162248 | Msa0521380:intron | 30.0% | |
| CAAGTTTGGATATCAATAGA+AGG | - | chr3_4:74162398-74162417 | Msa0521380:CDS | 30.0% | |
| GATATCAATAGAAGGTTCAA+GGG | - | chr3_4:74162406-74162425 | Msa0521380:CDS | 30.0% | |
| ATATCAATAGAAGGTTCAAG+GGG | - | chr3_4:74162407-74162426 | Msa0521380:CDS | 30.0% | |
| TGTAGAAGTTTCTAATTGAG+CGG | + | chr3_4:74162452-74162471 | None:intergenic | 30.0% | |
| !!! | CTAATAGCCTTTTTTGACAA+AGG | + | chr3_4:74162619-74162638 | None:intergenic | 30.0% |
| AAAGTCTATCAAAGATGCAT+TGG | - | chr3_4:74162767-74162786 | Msa0521380:intron | 30.0% | |
| AAGTCTATCAAAGATGCATT+GGG | - | chr3_4:74162768-74162787 | Msa0521380:intron | 30.0% | |
| ACAAATTATTGTATGGCTTG+AGG | - | chr3_4:74162821-74162840 | Msa0521380:intron | 30.0% | |
| CAAATTATTGTATGGCTTGA+GGG | - | chr3_4:74162822-74162841 | Msa0521380:intron | 30.0% | |
| AAGTGCATGTTAGAAATTGA+TGG | - | chr3_4:74163071-74163090 | Msa0521380:intron | 30.0% | |
| !! | TTGGTATACCTTGATTTGTA+TGG | + | chr3_4:74163307-74163326 | None:intergenic | 30.0% |
| TTGTCAAATTGAGTTCTTGT+TGG | + | chr3_4:74163326-74163345 | None:intergenic | 30.0% | |
| AACAACTAAAGGTCTCAAAT+TGG | + | chr3_4:74163453-74163472 | None:intergenic | 30.0% | |
| ATGATTCATGTGTGATGTAT+GGG | - | chr3_4:74163750-74163769 | Msa0521380:CDS | 30.0% | |
| GATGAAGAAGTTAATAAGGA+TGG | - | chr3_4:74163785-74163804 | Msa0521380:CDS | 30.0% | |
| TGAAGAAGTTAATAAGGATG+GGG | - | chr3_4:74163787-74163806 | Msa0521380:CDS | 30.0% | |
| TTTCAAATCCTTATCTTCAC+CGG | - | chr3_4:74163948-74163967 | Msa0521380:CDS | 30.0% | |
| GAAATACAACATAGAAGATG+TGG | + | chr3_4:74164017-74164036 | None:intergenic | 30.0% | |
| ! | GTCCTAACTCAAGCTTTAAT+TGG | + | chr3_4:74160864-74160883 | None:intergenic | 35.0% |
| ! | AAGCTTGAGTTAGGACTTTT+TGG | - | chr3_4:74160868-74160887 | Msa0521380:CDS | 35.0% |
| !!! | GGTTTTAAGGTACGATGAAA+GGG | + | chr3_4:74160994-74161013 | None:intergenic | 35.0% |
| !!! | TGGTTTTAAGGTACGATGAA+AGG | + | chr3_4:74160995-74161014 | None:intergenic | 35.0% |
| GGAAGAACCAAAAGGTAAAA+TGG | - | chr3_4:74161255-74161274 | Msa0521380:CDS | 35.0% | |
| AGAACCAAAAGGTAAAATGG+TGG | - | chr3_4:74161258-74161277 | Msa0521380:CDS | 35.0% | |
| CTTCCTTTGAACATTGGATT+CGG | + | chr3_4:74161329-74161348 | None:intergenic | 35.0% | |
| TTCAAAGGAAGCTTCCTATA+CGG | - | chr3_4:74161338-74161357 | Msa0521380:CDS | 35.0% | |
| !!! | GAGGTATTGCCTTCTATTTT+TGG | + | chr3_4:74161506-74161525 | None:intergenic | 35.0% |
| AAACATGGCATGTGTAATAG+AGG | + | chr3_4:74161525-74161544 | None:intergenic | 35.0% | |
| ! | TGAAGGGGTGTATTTATAAG+TGG | + | chr3_4:74161692-74161711 | None:intergenic | 35.0% |
| AGAATAATGTTGGTCGTGAA+GGG | + | chr3_4:74161708-74161727 | None:intergenic | 35.0% | |
| AATAATAGGTGGTCTGATAG+CGG | - | chr3_4:74161746-74161765 | Msa0521380:intron | 35.0% | |
| AATTGTTTGCAAAAGCAAGG+TGG | - | chr3_4:74162005-74162024 | Msa0521380:intron | 35.0% | |
| ! | TGACTTTACCGTGTTTTCAA+AGG | + | chr3_4:74162152-74162171 | None:intergenic | 35.0% |
| AAACACGGGACTATAGAAAA+AGG | - | chr3_4:74162178-74162197 | Msa0521380:intron | 35.0% | |
| AACACGGGACTATAGAAAAA+GGG | - | chr3_4:74162179-74162198 | Msa0521380:intron | 35.0% | |
| AACATCCATATGAGTCAGAT+GGG | - | chr3_4:74162260-74162279 | Msa0521380:intron | 35.0% | |
| AAAGTAACTCTTGACTCTGT+GGG | + | chr3_4:74162358-74162377 | None:intergenic | 35.0% | |
| AAAAGTAACTCTTGACTCTG+TGG | + | chr3_4:74162359-74162378 | None:intergenic | 35.0% | |
| !!! | AGAGTTACTTTTCCAAGTTC+AGG | - | chr3_4:74162367-74162386 | Msa0521380:CDS | 35.0% |
| !!! | GAGTTACTTTTCCAAGTTCA+GGG | - | chr3_4:74162368-74162387 | Msa0521380:CDS | 35.0% |
| GGATATCAATAGAAGGTTCA+AGG | - | chr3_4:74162405-74162424 | Msa0521380:CDS | 35.0% | |
| AATCCATCATACTCCTTTCA+CGG | - | chr3_4:74162471-74162490 | Msa0521380:CDS | 35.0% | |
| TAGAATTGACATACCGTGAA+AGG | + | chr3_4:74162487-74162506 | None:intergenic | 35.0% | |
| TCGCGCTACAAATTATTGTA+TGG | - | chr3_4:74162814-74162833 | Msa0521380:intron | 35.0% | |
| TCTGATTTCTGCAAAATGAG+AGG | + | chr3_4:74163098-74163117 | None:intergenic | 35.0% | |
| !! | TCTCTAAGATCAAACCTTCA+AGG | - | chr3_4:74163125-74163144 | Msa0521380:intron | 35.0% |
| !!! | CGTTAGTTTTGAGCTTTGAT+TGG | + | chr3_4:74163196-74163215 | None:intergenic | 35.0% |
| ! | CTTTTCACTTCGTTGATCAA+AGG | + | chr3_4:74163231-74163250 | None:intergenic | 35.0% |
| CTTTGATCAACGAAGTGAAA+AGG | - | chr3_4:74163229-74163248 | Msa0521380:intron | 35.0% | |
| TAGTTGCACTAATATCTCAC+TGG | - | chr3_4:74163279-74163298 | Msa0521380:intron | 35.0% | |
| AAACCTGTGTATGATTTCTG+AGG | + | chr3_4:74163479-74163498 | None:intergenic | 35.0% | |
| TAAGCAATGAAACTTCTCAG+GGG | + | chr3_4:74163507-74163526 | None:intergenic | 35.0% | |
| CTAAGCAATGAAACTTCTCA+GGG | + | chr3_4:74163508-74163527 | None:intergenic | 35.0% | |
| TCTAAGCAATGAAACTTCTC+AGG | + | chr3_4:74163509-74163528 | None:intergenic | 35.0% | |
| GAGAAGTTTCATTGCTTAGA+AGG | - | chr3_4:74163509-74163528 | Msa0521380:CDS | 35.0% | |
| CAACAACAACAACAACAACA+AGG | - | chr3_4:74163568-74163587 | Msa0521380:CDS | 35.0% | |
| !!! | ACTTTTTGAAGGGTGTCAAA+GGG | - | chr3_4:74163709-74163728 | Msa0521380:intron | 35.0% |
| GATGATTCATGTGTGATGTA+TGG | - | chr3_4:74163749-74163768 | Msa0521380:CDS | 35.0% | |
| GAAGAAGTTAATAAGGATGG+GGG | - | chr3_4:74163788-74163807 | Msa0521380:CDS | 35.0% | |
| !!! | AGTTTTGAGATAGTTTGTCG+TGG | - | chr3_4:74163839-74163858 | Msa0521380:CDS | 35.0% |
| AGTTAGACAACTTGAGAAAG+AGG | - | chr3_4:74163910-74163929 | Msa0521380:CDS | 35.0% | |
| TTGAGAAAGAGGAGAAGAAA+TGG | - | chr3_4:74163921-74163940 | Msa0521380:CDS | 35.0% | |
| GAAAATCAATCTGCAATTGC+CGG | + | chr3_4:74163970-74163989 | None:intergenic | 35.0% | |
| GAAAACTCCTTCTCACGTTT+GGG | - | chr3_4:74161059-74161078 | Msa0521380:CDS | 40.0% | |
| TACTATGTGTGTATAGGGAC+AGG | - | chr3_4:74161225-74161244 | Msa0521380:CDS | 40.0% | |
| ACTATGTGTGTATAGGGACA+GGG | - | chr3_4:74161226-74161245 | Msa0521380:CDS | 40.0% | |
| ACCAAAAGGTAAAATGGTGG+TGG | - | chr3_4:74161261-74161280 | Msa0521380:CDS | 40.0% | |
| ! | ACCACCACCATTTTACCTTT+TGG | + | chr3_4:74161265-74161284 | None:intergenic | 40.0% |
| !! | AAAGGTAAAATGGTGGTGGT+CGG | - | chr3_4:74161265-74161284 | Msa0521380:CDS | 40.0% |
| AGTTTGTATGACTCTAGCGA+TGG | - | chr3_4:74161291-74161310 | Msa0521380:CDS | 40.0% | |
| AGACCGAATCCAATGTTCAA+AGG | - | chr3_4:74161323-74161342 | Msa0521380:CDS | 40.0% | |
| AGGAAGCTTCCTTTGAACAT+TGG | + | chr3_4:74161335-74161354 | None:intergenic | 40.0% | |
| ! | AATCATCGAAGCTACCCTTT+TGG | - | chr3_4:74161378-74161397 | Msa0521380:CDS | 40.0% |
| AAGAATGGAGCGTACCAAAA+GGG | + | chr3_4:74161395-74161414 | None:intergenic | 40.0% | |
| AAAGAATGGAGCGTACCAAA+AGG | + | chr3_4:74161396-74161415 | None:intergenic | 40.0% | |
| GTGAAGTGAGCTTGTGAAAT+GGG | + | chr3_4:74161480-74161499 | None:intergenic | 40.0% | |
| CTTCACGCACCAAAAATAGA+AGG | - | chr3_4:74161494-74161513 | Msa0521380:CDS | 40.0% | |
| ! | CGTTTTTGTGAGGTAGTGTT+AGG | + | chr3_4:74161647-74161666 | None:intergenic | 40.0% |
| ! | AGGGGTGTATTTATAAGTGG+AGG | + | chr3_4:74161689-74161708 | None:intergenic | 40.0% |
| GAATAATGTTGGTCGTGAAG+GGG | + | chr3_4:74161707-74161726 | None:intergenic | 40.0% | |
| CAGAATAATGTTGGTCGTGA+AGG | + | chr3_4:74161709-74161728 | None:intergenic | 40.0% | |
| ! | GTCTAAGGTTATTGAAGCAC+AGG | - | chr3_4:74162098-74162117 | Msa0521380:intron | 40.0% |
| CAACATCCATATGAGTCAGA+TGG | - | chr3_4:74162259-74162278 | Msa0521380:intron | 40.0% | |
| ACTCATCAGAGTCAAACACA+GGG | + | chr3_4:74162288-74162307 | None:intergenic | 40.0% | |
| AAGTAACTCTTGACTCTGTG+GGG | + | chr3_4:74162357-74162376 | None:intergenic | 40.0% | |
| TTCAGGGACAAAGACAAGTT+TGG | - | chr3_4:74162384-74162403 | Msa0521380:CDS | 40.0% | |
| ! | ATACCGTGAAAGGAGTATGA+TGG | + | chr3_4:74162477-74162496 | None:intergenic | 40.0% |
| TTTGACAACCTCATCACACA+AGG | - | chr3_4:74163338-74163357 | Msa0521380:intron | 40.0% | |
| TCACACAAGGTTCATCTGAA+TGG | - | chr3_4:74163351-74163370 | Msa0521380:intron | 40.0% | |
| !! | TTCTGAGGCAGAACAACTAA+AGG | + | chr3_4:74163464-74163483 | None:intergenic | 40.0% |
| CAACAACAACAACAACAAGG+TGG | - | chr3_4:74163583-74163602 | Msa0521380:CDS | 40.0% | |
| ! | TTGGGTGAGAGACTTTTTGA+AGG | - | chr3_4:74163698-74163717 | Msa0521380:intron | 40.0% |
| ! | TGGGTGAGAGACTTTTTGAA+GGG | - | chr3_4:74163699-74163718 | Msa0521380:intron | 40.0% |
| !!! | GACTTTTTGAAGGGTGTCAA+AGG | - | chr3_4:74163708-74163727 | Msa0521380:intron | 40.0% |
| GAAGATGTGGAAGAGGATAA+AGG | + | chr3_4:74164004-74164023 | None:intergenic | 40.0% | |
| CAACATAGAAGATGTGGAAG+AGG | + | chr3_4:74164011-74164030 | None:intergenic | 40.0% | |
| ! | TGGCGATGATGATGAAGAAG+TGG | - | chr3_4:74160794-74160813 | Msa0521380:CDS | 45.0% |
| ! | CGATGATGATGAAGAAGTGG+TGG | - | chr3_4:74160797-74160816 | Msa0521380:CDS | 45.0% |
| GATGATGAAGAAGTGGTGGT+TGG | - | chr3_4:74160801-74160820 | Msa0521380:CDS | 45.0% | |
| AAGCAACAAGCACACAGTGA+AGG | - | chr3_4:74160834-74160853 | Msa0521380:CDS | 45.0% | |
| GTTTACAGTAGTTGCCACGT+TGG | + | chr3_4:74160896-74160915 | None:intergenic | 45.0% | |
| !! | ATGACTGCAGGGTGGTTTTA+AGG | + | chr3_4:74161007-74161026 | None:intergenic | 45.0% |
| ! | AACGTGAGAAGGAGTTTTCC+CGG | + | chr3_4:74161058-74161077 | None:intergenic | 45.0% |
| GGAAAACTCCTTCTCACGTT+TGG | - | chr3_4:74161058-74161077 | Msa0521380:CDS | 45.0% | |
| TGATTGTCCCAAACGTGAGA+AGG | + | chr3_4:74161069-74161088 | None:intergenic | 45.0% | |
| TTGTATGACTCTAGCGATGG+AGG | - | chr3_4:74161294-74161313 | Msa0521380:CDS | 45.0% | |
| GAAGCTTCCTATACGGTTGA+AGG | - | chr3_4:74161345-74161364 | Msa0521380:CDS | 45.0% | |
| CCATTGACCTTCAACCGTAT+AGG | + | chr3_4:74161355-74161374 | None:intergenic | 45.0% | |
| CCTATACGGTTGAAGGTCAA+TGG | - | chr3_4:74161352-74161371 | Msa0521380:CDS | 45.0% | |
| CGTGAAGTGAGCTTGTGAAA+TGG | + | chr3_4:74161481-74161500 | None:intergenic | 45.0% | |
| !!! | CCTCACAAGTCGTTTTTGTG+AGG | + | chr3_4:74161657-74161676 | None:intergenic | 45.0% |
| CCTCACAAAAACGACTTGTG+AGG | - | chr3_4:74161654-74161673 | Msa0521380:CDS | 45.0% | |
| CTCATCAGAGTCAAACACAG+GGG | + | chr3_4:74162287-74162306 | None:intergenic | 45.0% | |
| GACTCATCAGAGTCAAACAC+AGG | + | chr3_4:74162289-74162308 | None:intergenic | 45.0% | |
| TCGAACGAATCCACAACAAG+CGG | - | chr3_4:74162310-74162329 | Msa0521380:intron | 45.0% | |
| CTTGTCTTTGTCCCTGAACT+TGG | + | chr3_4:74162382-74162401 | None:intergenic | 45.0% | |
| TCAATAGAAGGTTCAAGGGG+TGG | - | chr3_4:74162410-74162429 | Msa0521380:CDS | 45.0% | |
| CAATAGAAGGTTCAAGGGGT+GGG | - | chr3_4:74162411-74162430 | Msa0521380:CDS | 45.0% | |
| !! | CACTGGCTCCATACAAATCA+AGG | - | chr3_4:74163296-74163315 | Msa0521380:intron | 45.0% |
| CAGATGAACCTTGTGTGATG+AGG | + | chr3_4:74163349-74163368 | None:intergenic | 45.0% | |
| CTGCCTCAGAAATCATACAC+AGG | - | chr3_4:74163473-74163492 | Msa0521380:CDS | 45.0% | |
| GGTGCAAAGAGTAGTTCAAG+AGG | - | chr3_4:74163809-74163828 | Msa0521380:CDS | 45.0% | |
| TGCAATTGCCGGTGAAGATA+AGG | + | chr3_4:74163959-74163978 | None:intergenic | 45.0% | |
| !! | TAATTATTTAATTAATTAAC+GGG | + | chr3_4:74162040-74162059 | None:intergenic | 5.0% |
| !! | AAATAGTAATATTATTAAAT+TGG | + | chr3_4:74163008-74163027 | None:intergenic | 5.0% |
| !!! | AGGACTTTTTGGAGCCAACG+TGG | - | chr3_4:74160879-74160898 | Msa0521380:CDS | 50.0% |
| CAGGGAGTGATATGACTGCA+GGG | + | chr3_4:74161018-74161037 | None:intergenic | 50.0% | |
| GACCTCTGTGTCTTCAACCT+TGG | - | chr3_4:74161090-74161109 | Msa0521380:CDS | 50.0% | |
| GTCCAAGGTTGAAGACACAG+AGG | + | chr3_4:74161095-74161114 | None:intergenic | 50.0% | |
| GGCAGACATGTTTGAGTCCA+AGG | + | chr3_4:74161110-74161129 | None:intergenic | 50.0% | |
| ATGTGTGTATAGGGACAGGG+TGG | - | chr3_4:74161229-74161248 | Msa0521380:CDS | 50.0% | |
| AACGAATCCACAACAAGCGG+TGG | - | chr3_4:74162313-74162332 | Msa0521380:intron | 50.0% | |
| CAACGAAGTGAAAAGGCCTC+TGG | - | chr3_4:74163236-74163255 | Msa0521380:intron | 50.0% | |
| GGAGTGATATGACTGCAGGG+TGG | + | chr3_4:74161015-74161034 | None:intergenic | 55.0% | |
| GCAGGGAGTGATATGACTGC+AGG | + | chr3_4:74161019-74161038 | None:intergenic | 55.0% | |
| TGTGTATAGGGACAGGGTGG+TGG | - | chr3_4:74161232-74161251 | Msa0521380:CDS | 55.0% | |
| GTGTATAGGGACAGGGTGGT+GGG | - | chr3_4:74161233-74161252 | Msa0521380:CDS | 55.0% | |
| TGTATAGGGACAGGGTGGTG+GGG | - | chr3_4:74161234-74161253 | Msa0521380:CDS | 55.0% | |
| !! | GGTGGTGGGGAAGAACCAAA+AGG | - | chr3_4:74161247-74161266 | Msa0521380:CDS | 55.0% |
| GGGGACCCATCTGACTCATA+TGG | + | chr3_4:74162268-74162287 | None:intergenic | 55.0% | |
| ! | TGAACTGCCACCGCTTGTTG+TGG | + | chr3_4:74162323-74162342 | None:intergenic | 55.0% |
| TGTGCATGCACTCTCACCAG+AGG | + | chr3_4:74163255-74163274 | None:intergenic | 55.0% | |
| GCAGCGACGAATCTACGGCA+GGG | + | chr3_4:74161036-74161055 | None:intergenic | 60.0% | |
| TGCCGTAGATTCGTCGCTGC+CGG | - | chr3_4:74161036-74161055 | Msa0521380:CDS | 60.0% | |
| TCCCGGCAGCGACGAATCTA+CGG | + | chr3_4:74161041-74161060 | None:intergenic | 60.0% | |
| GGCAGCGACGAATCTACGGC+AGG | + | chr3_4:74161037-74161056 | None:intergenic | 65.0% | |
| GCCGTAGATTCGTCGCTGCC+GGG | - | chr3_4:74161037-74161056 | Msa0521380:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 74160793 | 74164063 | 74160793 | ID=Msa0521380;Name=Msa0521380 |
| chr3_4 | mRNA | 74160793 | 74164063 | 74160793 | ID=Msa0521380-mRNA-1;Parent=Msa0521380;Name=Msa0521380-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0.33|0|1|1|1|4|0|613 |
| chr3_4 | exon | 74163734 | 74164063 | 74163734 | ID=Msa0521380-mRNA-1:exon:20938;Parent=Msa0521380-mRNA-1 |
| chr3_4 | exon | 74163457 | 74163615 | 74163457 | ID=Msa0521380-mRNA-1:exon:20937;Parent=Msa0521380-mRNA-1 |
| chr3_4 | exon | 74162364 | 74162762 | 74162364 | ID=Msa0521380-mRNA-1:exon:20936;Parent=Msa0521380-mRNA-1 |
| chr3_4 | exon | 74160793 | 74161746 | 74160793 | ID=Msa0521380-mRNA-1:exon:20935;Parent=Msa0521380-mRNA-1 |
| chr3_4 | CDS | 74163734 | 74164063 | 74163734 | ID=Msa0521380-mRNA-1:cds;Parent=Msa0521380-mRNA-1 |
| chr3_4 | CDS | 74163457 | 74163615 | 74163457 | ID=Msa0521380-mRNA-1:cds;Parent=Msa0521380-mRNA-1 |
| chr3_4 | CDS | 74162364 | 74162762 | 74162364 | ID=Msa0521380-mRNA-1:cds;Parent=Msa0521380-mRNA-1 |
| chr3_4 | CDS | 74160793 | 74161746 | 74160793 | ID=Msa0521380-mRNA-1:cds;Parent=Msa0521380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
