AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1416030

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1416030 MtrunA17_Chr7g0276681 99.267 546 4 0 1 546 1 546 0.0 1115
Msa1416030 MtrunA17_Chr2g0327711 56.848 533 208 6 32 546 16 544 0.0 568
Msa1416030 MtrunA17_Chr4g0030551 56.038 530 220 7 30 546 17 546 0.0 547
Msa1416030 MtrunA17_Chr7g0263421 54.598 522 222 7 36 546 3 520 0.0 523
Msa1416030 MtrunA17_Chr1g0212971 45.604 546 254 7 31 546 61 593 3.17e-142 423
Msa1416030 MtrunA17_Chr1g0161231 44.015 518 262 8 52 546 19 531 4.03e-136 405
Msa1416030 MtrunA17_Chr1g0161231 32.778 180 116 3 48 227 96 270 2.62e-13 72.4
Msa1416030 MtrunA17_Chr8g0391711 44.330 485 250 8 77 546 59 538 3.46e-129 387
Msa1416030 MtrunA17_Chr8g0391711 32.222 180 117 3 48 227 103 277 3.64e-13 72.0
Msa1416030 MtrunA17_Chr7g0263471 40.968 537 286 4 31 546 56 582 5.30e-117 358
Msa1416030 MtrunA17_Chr2g0331201 27.237 503 288 10 44 478 71 563 1.92e-40 155
Msa1416030 MtrunA17_Chr2g0331201 30.275 218 151 1 83 300 38 254 5.90e-15 77.8
Msa1416030 MtrunA17_Chr2g0331191 25.779 578 341 16 41 544 68 631 2.76e-39 152
Msa1416030 MtrunA17_Chr2g0331191 32.609 230 153 2 84 312 39 267 5.26e-17 84.3
Msa1416030 MtrunA17_Chr1g0178581 28.125 288 171 7 119 393 47 311 4.76e-22 99.0
Msa1416030 MtrunA17_Chr8g0361991 24.719 356 211 7 119 438 46 380 4.95e-22 99.0
Msa1416030 MtrunA17_Chr8g0353311 27.273 308 183 6 100 393 36 316 8.37e-22 98.2
Msa1416030 MtrunA17_Chr8g0370361 28.571 287 171 7 119 393 46 310 2.02e-21 97.1
Msa1416030 MtrunA17_Chr7g0233331 23.659 410 256 11 85 466 9 389 1.71e-20 94.0
Msa1416030 MtrunA17_Chr3g0136651 23.670 376 230 10 119 475 40 377 1.75e-20 94.0
Msa1416030 MtrunA17_Chr3g0122941 28.862 246 145 7 86 312 162 396 5.84e-20 93.6
Msa1416030 MtrunA17_Chr5g0439351 25.577 477 255 17 55 486 264 685 3.06e-19 91.7
Msa1416030 MtrunA17_Chr3g0083331 26.159 302 170 7 119 393 45 320 2.05e-18 87.8
Msa1416030 MtrunA17_Chr8g0367671 25.939 293 181 5 119 397 47 317 2.35e-18 87.8
Msa1416030 MtrunA17_Chr8g0376971 29.167 288 168 8 40 295 99 382 3.15e-18 88.2
Msa1416030 MtrunA17_Chr7g0221531 28.959 221 141 3 119 327 44 260 6.53e-18 86.3
Msa1416030 MtrunA17_Chr8g0369921 26.872 227 150 3 119 333 45 267 1.61e-17 85.1
Msa1416030 MtrunA17_Chr8g0364031 29.130 230 140 3 119 336 45 263 5.40e-17 83.6
Msa1416030 MtrunA17_Chr2g0328031 29.661 236 125 8 85 310 15 219 5.66e-17 83.6
Msa1416030 MtrunA17_Chr6g0461061 30.830 253 150 5 78 310 207 454 2.26e-16 82.0
Msa1416030 MtrunA17_Chr6g0461061 32.065 184 103 7 41 224 308 469 1.21e-11 67.4
Msa1416030 MtrunA17_Chr6g0458951 29.582 311 177 10 17 291 75 379 2.61e-16 82.4
Msa1416030 MtrunA17_Chr7g0262731 30.924 249 140 7 119 340 44 287 1.27e-15 80.1
Msa1416030 MtrunA17_Chr7g0262731 28.571 196 126 4 112 297 5 196 3.38e-12 68.9
Msa1416030 MtrunA17_Chr5g0439361 23.919 393 237 12 131 486 1 368 1.29e-15 79.3
Msa1416030 MtrunA17_Chr5g0439161 25.000 448 284 11 78 486 207 641 1.31e-15 80.1
Msa1416030 MtrunA17_Chr5g0439161 26.708 322 169 14 40 302 86 399 2.13e-13 73.2
Msa1416030 MtrunA17_Chr8g0368621 23.345 287 186 4 119 393 42 306 6.86e-15 75.9
Msa1416030 MtrunA17_Chr4g0031491 31.034 232 138 7 82 296 13 239 7.40e-15 77.0
Msa1416030 MtrunA17_Chr5g0418551 38.621 145 82 6 181 320 50 192 9.30e-15 74.3
Msa1416030 MtrunA17_Chr5g0418551 37.143 140 81 5 154 290 58 193 9.84e-15 74.3
Msa1416030 MtrunA17_Chr5g0418551 31.868 182 117 6 77 256 50 226 3.63e-13 69.7
Msa1416030 MtrunA17_Chr8g0354071 23.873 377 226 11 127 472 2 348 1.10e-14 75.9
Msa1416030 MtrunA17_Chr3g0093531 24.403 377 224 12 127 472 2 348 3.05e-14 74.7
Msa1416030 MtrunA17_Chr8g0361891 31.532 222 116 10 123 313 139 355 1.52e-13 72.4
Msa1416030 MtrunA17_Chr2g0293861 31.214 173 108 6 130 293 10 180 2.69e-13 69.3
Msa1416030 MtrunA17_Chr7g0262761 30.380 158 99 3 119 266 47 203 8.76e-13 67.8
Msa1416030 MtrunA17_Chr1g0196261 31.122 196 116 6 103 297 240 417 3.65e-12 68.6
Msa1416030 MtrunA17_Chr5g0409271 35.366 164 97 5 120 283 15 169 3.85e-12 67.0
Msa1416030 MtrunA17_Chr2g0297701 22.892 498 277 16 43 495 114 549 9.00e-12 67.8
Msa1416030 MtrunA17_Chr1g0211241 29.474 190 131 3 121 310 140 326 2.67e-11 66.2
Msa1416030 MtrunA17_Chr4g0010051 31.220 205 115 8 110 295 47 244 6.37e-11 64.7
Msa1416030 MtrunA17_Chr4g0049351 32.308 130 85 3 147 275 120 247 8.14e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1416030 AT2G31820.1 74.234 555 133 5 1 546 109 662 0.0 825
Msa1416030 AT1G05640.1 71.199 559 148 6 1 546 69 627 0.0 793
Msa1416030 AT5G60070.1 56.711 529 208 8 35 546 24 548 0.0 558
Msa1416030 AT1G07710.2 57.170 530 212 5 31 546 15 543 0.0 548
Msa1416030 AT1G07710.1 57.170 530 212 5 31 546 15 543 0.0 548
Msa1416030 AT5G02620.4 50.287 523 242 6 35 546 9 524 1.54e-162 473
Msa1416030 AT5G02620.1 50.287 523 242 6 35 546 9 524 1.54e-162 473
Msa1416030 AT5G02620.3 50.287 523 242 6 35 546 9 524 1.54e-162 473
Msa1416030 AT5G02620.5 48.352 546 241 7 35 546 9 547 1.99e-157 461
Msa1416030 AT5G02620.2 48.352 546 241 7 35 546 9 547 1.99e-157 461
Msa1416030 AT3G12360.2 42.329 541 275 7 31 546 50 578 4.88e-127 384
Msa1416030 AT3G12360.1 42.329 541 275 7 31 546 62 590 5.27e-127 384
Msa1416030 AT2G01680.1 42.708 480 254 7 50 513 17 491 1.75e-123 373
Msa1416030 AT2G01680.1 28.796 191 131 2 47 237 98 283 8.50e-12 68.2
Msa1416030 AT3G09550.2 41.651 545 276 9 31 546 83 614 1.70e-119 365
Msa1416030 AT3G09550.1 41.651 545 276 9 31 546 76 607 1.74e-119 365
Msa1416030 AT3G09550.3 41.651 545 276 9 31 546 76 607 1.74e-119 365
Msa1416030 AT5G54710.1 28.797 507 326 13 43 534 102 588 8.30e-44 164
Msa1416030 AT5G54710.2 28.797 507 326 13 43 534 147 633 1.78e-43 164
Msa1416030 AT5G54710.2 25.000 312 179 11 43 317 18 311 9.22e-13 71.2
Msa1416030 AT1G34050.1 27.122 483 308 12 43 513 88 538 3.57e-38 148
Msa1416030 AT2G24600.3 25.773 485 319 15 43 502 71 539 1.48e-35 141
Msa1416030 AT2G24600.4 25.773 485 319 15 43 502 71 539 1.48e-35 141
Msa1416030 AT1G10340.1 25.470 479 313 13 46 498 74 534 2.34e-35 140
Msa1416030 AT1G10340.2 24.950 501 316 13 47 498 41 530 9.53e-35 138
Msa1416030 AT4G03500.1 26.539 471 317 9 43 493 136 597 3.21e-33 134
Msa1416030 AT4G03500.1 26.840 231 125 6 110 297 96 325 3.29e-12 69.7
Msa1416030 AT4G03500.2 26.539 471 317 9 43 493 113 574 3.53e-33 134
Msa1416030 AT4G03500.2 26.840 231 125 6 110 297 73 302 3.41e-12 69.7
Msa1416030 AT4G03500.3 26.539 471 317 9 43 493 113 574 3.53e-33 134
Msa1416030 AT4G03500.3 26.840 231 125 6 110 297 73 302 3.41e-12 69.7
Msa1416030 AT5G50140.1 26.389 504 303 20 33 498 17 490 1.94e-29 122
Msa1416030 AT1G03670.1 24.520 469 288 9 41 478 144 577 1.78e-27 117
Msa1416030 AT1G03670.1 29.293 198 133 3 108 298 64 261 1.10e-14 77.4
Msa1416030 AT4G03480.2 28.191 376 221 9 78 435 309 653 1.88e-26 114
Msa1416030 AT4G03480.2 24.333 300 187 8 31 297 140 432 1.77e-13 73.6
Msa1416030 AT4G03480.1 28.191 376 221 9 78 435 312 656 2.00e-26 114
Msa1416030 AT4G03480.1 24.092 303 187 8 31 297 140 435 4.00e-13 72.8
Msa1416030 AT4G03470.1 26.494 502 311 14 43 532 201 656 8.12e-26 112
Msa1416030 AT4G03460.2 25.659 417 280 10 43 435 82 492 6.75e-25 109
Msa1416030 AT4G03460.1 25.659 417 280 10 43 435 114 524 8.90e-25 108
Msa1416030 AT4G03460.1 26.316 266 170 8 50 297 53 310 2.36e-13 73.2
Msa1416030 AT4G14390.2 25.370 540 318 13 43 512 113 637 1.96e-24 108
Msa1416030 AT4G14390.4 25.370 540 318 13 43 512 132 656 2.31e-24 107
Msa1416030 AT5G54700.2 26.718 393 203 14 170 544 17 342 4.30e-24 103
Msa1416030 AT4G03490.4 25.536 466 301 13 43 501 144 570 4.31e-24 107
Msa1416030 AT4G03490.3 25.536 466 301 13 43 501 144 570 5.41e-24 107
Msa1416030 AT4G03490.5 25.536 466 301 13 43 501 134 560 5.94e-24 106
Msa1416030 AT4G14390.1 25.508 541 317 14 43 512 132 657 1.68e-23 105
Msa1416030 AT4G10720.2 25.281 356 226 8 119 455 40 374 2.40e-22 100
Msa1416030 AT4G03490.2 22.338 479 316 11 42 501 71 512 3.09e-22 101
Msa1416030 AT4G03490.1 22.338 479 316 11 42 501 81 522 4.08e-22 100
Msa1416030 AT4G10720.1 27.027 296 182 5 119 398 40 317 9.89e-21 95.5
Msa1416030 AT4G05040.3 27.053 414 238 13 41 435 195 563 1.31e-20 95.9
Msa1416030 AT4G05040.3 26.214 206 129 3 74 278 74 257 1.37e-11 67.4
Msa1416030 AT4G05040.2 27.053 414 238 13 41 435 195 563 1.31e-20 95.9
Msa1416030 AT4G05040.2 26.214 206 129 3 74 278 74 257 1.37e-11 67.4
Msa1416030 AT4G05040.5 27.053 414 238 13 41 435 195 563 1.31e-20 95.9
Msa1416030 AT4G05040.5 26.214 206 129 3 74 278 74 257 1.37e-11 67.4
Msa1416030 AT4G05040.4 27.053 414 238 13 41 435 195 563 1.31e-20 95.9
Msa1416030 AT4G05040.4 26.214 206 129 3 74 278 74 257 1.37e-11 67.4
Msa1416030 AT4G05040.1 27.053 414 238 13 41 435 195 563 1.31e-20 95.9
Msa1416030 AT4G05040.1 26.214 206 129 3 74 278 74 257 1.37e-11 67.4
Msa1416030 AT4G05040.6 27.053 414 238 13 41 435 195 563 1.31e-20 95.9
Msa1416030 AT4G05040.6 26.214 206 129 3 74 278 74 257 1.37e-11 67.4
Msa1416030 AT4G05040.7 27.053 414 238 13 41 435 195 563 1.31e-20 95.9
Msa1416030 AT4G05040.7 26.214 206 129 3 74 278 74 257 1.37e-11 67.4
Msa1416030 AT4G03450.2 26.923 494 285 19 42 485 104 571 2.07e-20 95.5
Msa1416030 AT4G03450.1 27.255 499 277 20 42 485 104 571 2.55e-20 95.1
Msa1416030 AT2G24600.2 24.839 467 284 16 43 485 71 494 6.76e-20 93.6
Msa1416030 AT2G24600.1 24.839 467 284 16 43 485 71 494 6.76e-20 93.6
Msa1416030 AT4G14400.1 25.490 459 295 10 69 512 205 631 1.06e-19 93.6
Msa1416030 AT4G03440.1 24.838 463 282 14 69 510 260 677 1.13e-19 93.6
Msa1416030 AT4G03440.1 25.085 295 193 9 31 302 108 397 3.99e-12 69.7
Msa1416030 AT4G03440.2 24.838 463 282 14 69 510 253 670 1.41e-19 93.2
Msa1416030 AT4G03440.2 25.085 295 193 9 31 302 101 390 4.64e-12 69.3
Msa1416030 AT4G03440.3 24.838 463 282 14 69 510 253 670 1.41e-19 93.2
Msa1416030 AT4G03440.3 25.085 295 193 9 31 302 101 390 4.64e-12 69.3
Msa1416030 AT4G14400.2 25.490 459 295 10 69 512 139 565 1.62e-19 92.8
Msa1416030 AT4G14400.3 25.490 459 295 10 69 512 139 565 1.62e-19 92.8
Msa1416030 AT3G01750.2 31.271 291 162 9 43 299 105 391 5.96e-19 90.9
Msa1416030 AT3G01750.1 31.271 291 162 9 43 299 105 391 5.96e-19 90.9
Msa1416030 AT5G15500.2 26.460 291 180 5 119 393 41 313 2.11e-17 85.5
Msa1416030 AT5G51160.1 25.846 325 197 10 147 438 44 357 4.96e-17 84.0
Msa1416030 AT1G14500.1 28.632 234 150 3 119 335 40 273 7.34e-16 80.5
Msa1416030 AT5G54700.1 25.434 346 190 12 181 497 34 340 7.46e-16 80.9
Msa1416030 AT3G04140.1 27.055 292 170 6 43 295 102 389 1.06e-15 80.9
Msa1416030 AT2G03430.1 38.571 140 80 5 181 316 43 180 5.39e-15 75.1
Msa1416030 AT2G03430.1 31.579 190 123 6 77 264 43 227 5.00e-13 69.3
Msa1416030 AT2G03430.1 39.437 142 75 6 154 290 51 186 3.09e-12 67.0
Msa1416030 AT4G14390.3 24.762 420 235 11 43 392 113 521 7.00e-15 77.8
Msa1416030 AT5G54620.1 28.205 234 153 3 117 335 38 271 9.09e-15 77.0
Msa1416030 AT5G54610.1 27.895 190 127 2 119 298 40 229 2.11e-14 75.9
Msa1416030 AT5G54610.1 28.638 213 137 5 68 267 22 232 4.14e-12 68.6
Msa1416030 AT1G14480.1 23.636 385 236 8 119 448 40 421 2.61e-14 75.9
Msa1416030 AT2G28840.1 32.487 197 100 5 120 310 50 219 4.55e-14 75.1
Msa1416030 AT3G04710.2 31.925 213 136 6 110 320 49 254 1.85e-12 70.1
Msa1416030 AT4G19150.1 30.460 174 84 3 120 293 20 156 2.53e-12 67.4
Msa1416030 AT3G04710.1 31.683 202 130 5 110 310 49 243 3.48e-11 65.9
Msa1416030 AT3G04710.3 31.683 202 130 5 110 310 273 467 3.96e-11 66.2
Msa1416030 AT5G57740.1 30.374 214 110 8 119 296 54 264 4.25e-11 65.9

Find 142 sgRNAs with CRISPR-Local

Find 397 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTGGCATTATTCATTTCTT+TGG 0.247268 tig0024313:-13102 Msa1416030:CDS
GAAGGGATCATAACCATTTC+TGG 0.256676 tig0024313:+17133 None:intergenic
AGGATCCAAGCACCGGATTT+AGG 0.271641 tig0024313:-16765 Msa1416030:CDS
TCCTGATGCTTAATATAATA+TGG 0.271681 tig0024313:+17846 None:intergenic
TGACGTCGTGAATCTCCTTT+TGG 0.292532 tig0024313:-16893 Msa1416030:CDS
TTTAGTTGCTTTGCTGCATT+TGG 0.317628 tig0024313:+13416 None:intergenic
CCTTCACTCTGCGGCTAGAA+TGG 0.320595 tig0024313:-16821 Msa1416030:CDS
CAAGAGGATGTACGCACTTT+AGG 0.320769 tig0024313:-12754 Msa1416030:exon
TTCTGAGAACGGACATGATT+TGG 0.325398 tig0024313:-17207 Msa1416030:CDS
AGCCCCAGCATCCCTCATTA+TGG 0.329160 tig0024313:+13466 None:intergenic
TGCGGCTAGAATGGGGCATT+TGG 0.335820 tig0024313:-16812 Msa1416030:CDS
TAACATCAATGCTACTAATA+AGG 0.340466 tig0024313:-13543 Msa1416030:CDS
CTTCACTCTGCGGCTAGAAT+GGG 0.352049 tig0024313:-16820 Msa1416030:CDS
GACAGTCTTACCATTGTTCC+TGG 0.365757 tig0024313:+16843 None:intergenic
TTAAATCTAGAGGATAATAA+AGG 0.376597 tig0024313:-16649 Msa1416030:CDS
GCTTCTATTGTCGCCAGAAA+TGG 0.381329 tig0024313:-17146 Msa1416030:CDS
TTCATTTAGCTGCTCGGGCT+GGG 0.381699 tig0024313:-17331 Msa1416030:CDS
GGAGAGGCAGCTGAGCTTCA+TGG 0.386167 tig0024313:-17408 Msa1416030:CDS
TATGTTGAAGAGAAAGTAAA+TGG 0.386691 tig0024313:-13191 Msa1416030:CDS
CTGCATTTGGAGGTTTCCCT+TGG 0.389760 tig0024313:+13429 None:intergenic
GCTTGGATCCTTGCTTAGTA+AGG 0.394921 tig0024313:+16777 None:intergenic
TTCTCTCACTTACGTGGTAG+TGG 0.396214 tig0024313:-12961 Msa1416030:CDS
TCTGGACCCTCATGCCCGTC+TGG 0.398040 tig0024313:+13339 None:intergenic
CTTCCATGTTGCTGCAAAGC+AGG 0.398447 tig0024313:-17114 Msa1416030:CDS
CAGAGGTAATCGCATTGTTC+AGG 0.401763 tig0024313:+13279 None:intergenic
GTCTCCATAATGAGGGATGC+TGG 0.403600 tig0024313:-13470 Msa1416030:CDS
TGCAAAGAAGGGCCGTAATC+AGG 0.408212 tig0024313:-16605 Msa1416030:intron
ATTCATTTAGCTGCTCGGGC+TGG 0.412041 tig0024313:-17332 Msa1416030:CDS
TACCGATTCATTTAGCTGCT+CGG 0.412349 tig0024313:-17337 Msa1416030:CDS
GCCATATTATATTAAGCATC+AGG 0.412682 tig0024313:-17847 Msa1416030:five_prime_UTR
GCTATATATGCTACAGTGAT+TGG 0.413428 tig0024313:-12918 Msa1416030:CDS
AGTTGTTGTGATTGAGCAAA+AGG 0.415505 tig0024313:-13057 Msa1416030:CDS
AGTTGCTTTGCTGCATTTGG+AGG 0.423178 tig0024313:+13419 None:intergenic
CTCATTATGGAGACAAGATC+TGG 0.425108 tig0024313:+13479 None:intergenic
GATCTAAGCTATGATTTAAA+CGG 0.432410 tig0024313:-12700 Msa1416030:three_prime_UTR
TTCTCAGAAGCGACGTAAAG+AGG 0.435647 tig0024313:+17221 None:intergenic
AGATTTAAAACTGCTCGGTC+AGG 0.438182 tig0024313:+16664 None:intergenic
ACCGATTCATTTAGCTGCTC+GGG 0.450097 tig0024313:-17336 Msa1416030:CDS
TCTCCATAATGAGGGATGCT+GGG 0.451849 tig0024313:-13469 Msa1416030:CDS
TTTCTCTTCAACATATTGAC+CGG 0.455311 tig0024313:+13199 None:intergenic
CATTGTTCAGGCCACTTATG+TGG 0.455464 tig0024313:+13291 None:intergenic
GTTGAAAGGGAAGCTAGAAA+TGG 0.457389 tig0024313:-17942 Msa1416030:five_prime_UTR
ATTGCATATTGCTGCAAAGA+AGG 0.465601 tig0024313:-16617 Msa1416030:CDS
CATGGAGAAAGAACGGCTTT+CGG 0.467112 tig0024313:+12815 None:intergenic
CATTAACAAGCTCATGTGGC+TGG 0.467378 tig0024313:-13012 Msa1416030:CDS
ACAAGTCCTTTGCTGCCTCA+TGG 0.467607 tig0024313:+17273 None:intergenic
GCCCGAGCAGCTAAATGAAT+CGG 0.469940 tig0024313:+17335 None:intergenic
TGAGGCAGCAAAGGACTTGT+TGG 0.470727 tig0024313:-17270 Msa1416030:CDS
CTGGCGTGTCTGTTGGAGTT+GGG 0.471422 tig0024313:+13358 None:intergenic
TCTGTAGTCATGGCCAAGTT+GGG 0.474009 tig0024313:+16964 None:intergenic
TAGCGAGATACTCAAATACT+TGG 0.475702 tig0024313:-17180 Msa1416030:CDS
TCTCAGAAGCGACGTAAAGA+GGG 0.479972 tig0024313:+17222 None:intergenic
GCAGCCATCTTCACTGTCCC+CGG 0.481349 tig0024313:-13218 Msa1416030:CDS
GAGAGGCAGCTGAGCTTCAT+GGG 0.489122 tig0024313:-17407 Msa1416030:CDS
ATCTGTAGTCATGGCCAAGT+TGG 0.490000 tig0024313:+16963 None:intergenic
TGAAGGCAATGGAAATGAAA+AGG 0.490893 tig0024313:+12985 None:intergenic
TCAGTCCTAAATCCGGTGCT+TGG 0.504143 tig0024313:+16760 None:intergenic
TCTGGCGTGTCTGTTGGAGT+TGG 0.506059 tig0024313:+13357 None:intergenic
TTTCTTATCAGTCCTAAATC+CGG 0.506072 tig0024313:+16753 None:intergenic
CACTACACATGGCTGTGAAA+GGG 0.507134 tig0024313:-16720 Msa1416030:CDS
TAAAAGCAAACACCTGATTA+CGG 0.507872 tig0024313:+16593 None:intergenic
GCTGCAAAGCAGGGTCATCT+TGG 0.508636 tig0024313:-17104 Msa1416030:intron
TTGATAATGCTCTCTACAAT+CGG 0.508727 tig0024313:-12891 Msa1416030:CDS
CACGACGTCAATGTGACCTT+GGG 0.509692 tig0024313:+16906 None:intergenic
CAGATCTTGTCTCCATAATG+AGG 0.509836 tig0024313:-13478 Msa1416030:CDS
ATTTGGAGGTTTCCCTTGGT+CGG 0.511494 tig0024313:+13433 None:intergenic
CTTTACGTCGCTTCTGAGAA+CGG 0.514029 tig0024313:-17218 Msa1416030:CDS
TGTGTGTAAAGCAGTTGAAT+TGG 0.520334 tig0024313:+16936 None:intergenic
CTGAAGAAACTCCACATAAG+TGG 0.520816 tig0024313:-13302 Msa1416030:CDS
CTCCAACAGACACGCCAGAC+GGG 0.522130 tig0024313:-13353 Msa1416030:CDS
ATCAATGCTACTAATAAGGC+GGG 0.522866 tig0024313:-13539 Msa1416030:CDS
GGTAAGTCGCCACGTTTCCC+AGG 0.525989 tig0024313:+17356 None:intergenic
CCTCTAGATTTAAAACTGCT+CGG 0.526757 tig0024313:+16659 None:intergenic
ATTCATTTCTTTGGCTGTCG+TGG 0.528156 tig0024313:-13093 Msa1416030:CDS
GCACTACACATGGCTGTGAA+AGG 0.531620 tig0024313:-16721 Msa1416030:CDS
ATTCACCGTTCAAAATCTCC+TGG 0.533489 tig0024313:+12778 None:intergenic
AGTGAGGGATAATGTTGAAA+GGG 0.533570 tig0024313:-17955 Msa1416030:five_prime_UTR
GATAGATGAGACAAAATTGA+GGG 0.537415 tig0024313:-12838 Msa1416030:CDS
CACGTAAGTGAGAGAAATGA+AGG 0.544789 tig0024313:+12968 None:intergenic
GGTTTGAATCTGATTCCAAA+AGG 0.544875 tig0024313:+16878 None:intergenic
TTGACCGGGGACAGTGAAGA+TGG 0.544944 tig0024313:+13214 None:intergenic
AAGTGAGGGATAATGTTGAA+AGG 0.546380 tig0024313:-17956 Msa1416030:five_prime_UTR
TCACGACGTCAATGTGACCT+TGG 0.547725 tig0024313:+16905 None:intergenic
AAGAAGAGCAAGGAATCACC+TGG 0.548629 tig0024313:-17374 Msa1416030:CDS
CTGCTTTGCAGCAACATGGA+AGG 0.550006 tig0024313:+17115 None:intergenic
TTGCATATTGCTGCAAAGAA+GGG 0.553144 tig0024313:-16616 Msa1416030:CDS
AAGTGAGAGGAAGAAGAGCA+AGG 0.553626 tig0024313:-17384 Msa1416030:CDS
TCTCTCACTTACGTGGTAGT+GGG 0.555983 tig0024313:-12960 Msa1416030:CDS
TTCTCTTCAACATATTGACC+GGG 0.561606 tig0024313:+13200 None:intergenic
AACAGCAACAACAGTAGCAG+AGG 0.562112 tig0024313:+13262 None:intergenic
TGTGAAAGCCTTACTAAGCA+AGG 0.562203 tig0024313:-16785 Msa1416030:CDS
TGCTTTGCAGCAACATGGAA+GGG 0.565820 tig0024313:+17116 None:intergenic
TTCCATGTTGCTGCAAAGCA+GGG 0.566001 tig0024313:-17113 Msa1416030:CDS
CCAAAGAAATGAATAATGCC+AGG 0.566227 tig0024313:+13102 None:intergenic
TGGAGGTTTCCCTTGGTCGG+TGG 0.569501 tig0024313:+13436 None:intergenic
AGTGAGAGAAATGAAGGCAA+TGG 0.571730 tig0024313:+12974 None:intergenic
CATTTCTTTGGCTGTCGTGG+TGG 0.572639 tig0024313:-13090 Msa1416030:CDS
GACCCTGCTTTGCAGCAACA+TGG 0.573006 tig0024313:+17111 None:intergenic
TTGTCATTAACAAGCTCATG+TGG 0.574156 tig0024313:-13016 Msa1416030:CDS
CCATTCTAGCCGCAGAGTGA+AGG 0.575265 tig0024313:+16821 None:intergenic
CTAAGCAAGGATCCAAGCAC+CGG 0.576042 tig0024313:-16772 Msa1416030:CDS
TCAAAACCATGAGGCAGCAA+AGG 0.578528 tig0024313:-17279 Msa1416030:CDS
CTCCATAATGAGGGATGCTG+GGG 0.582844 tig0024313:-13468 Msa1416030:CDS
AGACACGCCAGACGGGCATG+AGG 0.585010 tig0024313:-13346 Msa1416030:CDS
TTCACTCTGCGGCTAGAATG+GGG 0.586636 tig0024313:-16819 Msa1416030:CDS
GCTGTTAATTCCACCGACCA+AGG 0.589761 tig0024313:-13446 Msa1416030:CDS
CTGGTCTGATGTATGCGACA+TGG 0.589809 tig0024313:+12797 None:intergenic
ATTGGACAAATCTGTAGTCA+TGG 0.593370 tig0024313:+16954 None:intergenic
GGATAGATGAGACAAAATTG+AGG 0.593412 tig0024313:-12839 Msa1416030:CDS
TTGGCAAAGCAGAACCTCGA+GGG 0.594567 tig0024313:-17251 Msa1416030:CDS
AGGTCAAACTGCACTACACA+TGG 0.594858 tig0024313:-16731 Msa1416030:CDS
GAACATATATCTATCTACCT+TGG 0.598653 tig0024313:-17874 Msa1416030:five_prime_UTR
TCATAGCTTAGATCGTAGCT+TGG 0.599699 tig0024313:+12709 None:intergenic
CAGAATGACACAATAGCACA+TGG 0.602461 tig0024313:+12866 None:intergenic
CATCAATGCTACTAATAAGG+CGG 0.608173 tig0024313:-13540 Msa1416030:CDS
GACACGCCAGACGGGCATGA+GGG 0.616315 tig0024313:-13345 Msa1416030:CDS
CTTCATTTCTCTCACTTACG+TGG 0.617532 tig0024313:-12967 Msa1416030:CDS
CATGTCGCATACATCAGACC+AGG 0.620062 tig0024313:-12796 Msa1416030:CDS
AGATCTTGTCTCCATAATGA+GGG 0.621157 tig0024313:-13477 Msa1416030:CDS
CTCAGAAGCGACGTAAAGAG+GGG 0.621468 tig0024313:+17223 None:intergenic
TACCCTCCGTTGATAACAAG+CGG 0.621861 tig0024313:+13567 None:intergenic
CTGTTAATTCCACCGACCAA+GGG 0.622584 tig0024313:-13445 Msa1416030:CDS
GGATTTAGGACTGATAAGAA+AGG 0.622915 tig0024313:-16751 Msa1416030:CDS
CCGCCGCTTGTTATCAACGG+AGG 0.624596 tig0024313:-13570 Msa1416030:CDS
ACTCCAACAGACACGCCAGA+CGG 0.625293 tig0024313:-13354 Msa1416030:CDS
TATGCGACATGGAGAAAGAA+CGG 0.627806 tig0024313:+12808 None:intergenic
TTACACACAGCTGCTACCCA+AGG 0.629783 tig0024313:-16922 Msa1416030:CDS
TGAGCTTCATGGGAAGTGAG+AGG 0.638406 tig0024313:-17397 Msa1416030:CDS
TGTCCGCCGCTTGTTATCAA+CGG 0.646577 tig0024313:-13573 Msa1416030:CDS
AAGGAATCACCTGGGAAACG+TGG 0.653514 tig0024313:-17365 Msa1416030:CDS
AATATAATATGGCTCAACCA+AGG 0.661399 tig0024313:+17857 None:intergenic
TGGCAAAGCAGAACCTCGAG+GGG 0.666459 tig0024313:-17250 Msa1416030:CDS
GCTATTGTGTCATTCTGCAT+AGG 0.668692 tig0024313:-12860 Msa1416030:CDS
GCAACAGCAAGCATCAAAGA+CGG 0.680959 tig0024313:-17773 Msa1416030:intron
GTTGGCAAAGCAGAACCTCG+AGG 0.692209 tig0024313:-17252 Msa1416030:CDS
AGAAGAGCAAGGAATCACCT+GGG 0.695083 tig0024313:-17373 Msa1416030:CDS
TCTCTTCAACATATTGACCG+GGG 0.706481 tig0024313:+13201 None:intergenic
TAAGACTGTCCTTCACTCTG+CGG 0.709234 tig0024313:-16830 Msa1416030:CDS
GATACTACTTCAAAACCATG+AGG 0.726605 tig0024313:-17288 Msa1416030:CDS
GGCAAAGCAGAACCTCGAGG+GGG 0.735780 tig0024313:-17249 Msa1416030:CDS
CCTCCGTTGATAACAAGCGG+CGG 0.744744 tig0024313:+13570 None:intergenic
TAGTGGGATCACACTCACGA+TGG 0.748360 tig0024313:-12944 Msa1416030:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATCGT+AGG - tig0024313:15627-15646 Msa1416030:intron 10.0%
!! ATTAATTCATTATTTATTGT+TGG - tig0024313:16718-16737 Msa1416030:CDS 10.0%
!!! TCTCAATAATTAGTTTATAA+AGG + tig0024313:14029-14048 None:intergenic 15.0%
!! TAACATAAGAGAAATATATA+GGG + tig0024313:14960-14979 None:intergenic 15.0%
!! ATAACATAAGAGAAATATAT+AGG + tig0024313:14961-14980 None:intergenic 15.0%
!!! AAACATAAGAATTTTAACTT+GGG - tig0024313:15129-15148 Msa1416030:intron 15.0%
!!! ATATTTTCATATAGCAATAA+TGG + tig0024313:15210-15229 None:intergenic 15.0%
!!! ATTATAATTCGTTTTATCTT+AGG - tig0024313:15665-15684 Msa1416030:intron 15.0%
!!! AATTGCATTCATATTTATTT+TGG - tig0024313:15719-15738 Msa1416030:intron 15.0%
!! TCAAATTATCATAATTCATA+TGG + tig0024313:16455-16474 None:intergenic 15.0%
!!! TTATTATGTTTTCTGTTGTT+GGG - tig0024313:13005-13024 Msa1416030:CDS 20.0%
!! AAAAACAATCTACAATACAA+TGG - tig0024313:13060-13079 Msa1416030:CDS 20.0%
!! TTAAATCTAGAGGATAATAA+AGG - tig0024313:13900-13919 Msa1416030:intron 20.0%
!!! TACAGTTATGCTTATATTTT+AGG + tig0024313:14156-14175 None:intergenic 20.0%
!! TATGTCTATAATAATGTCTT+CGG - tig0024313:14632-14651 Msa1416030:intron 20.0%
!! AACATAAGAGAAATATATAG+GGG + tig0024313:14959-14978 None:intergenic 20.0%
!! AACAAAATGAATAACAAAGA+GGG + tig0024313:15033-15052 None:intergenic 20.0%
!!! GAAACATAAGAATTTTAACT+TGG - tig0024313:15128-15147 Msa1416030:intron 20.0%
!!! TCATTTTTTCACTTTTAAGT+TGG - tig0024313:15805-15824 Msa1416030:intron 20.0%
!!! CCAAAAAAGTATATTAACAA+TGG + tig0024313:15946-15965 None:intergenic 20.0%
!!! CCATTGTTAATATACTTTTT+TGG - tig0024313:15943-15962 Msa1416030:intron 20.0%
!! CCAAAAAAAAAAAAAGACTT+AGG + tig0024313:16196-16215 None:intergenic 20.0%
!!! CCTAAGTCTTTTTTTTTTTT+TGG - tig0024313:16193-16212 Msa1416030:intron 20.0%
!!! GATTCATTAATGTTTTTCAT+GGG + tig0024313:16390-16409 None:intergenic 20.0%
!! AACATTAATGAATCCTTAAT+CGG - tig0024313:16396-16415 Msa1416030:intron 20.0%
!! TAAAAGAACAAAAAATGATG+TGG + tig0024313:16565-16584 None:intergenic 20.0%
!!! TTTTGTTCTTTTAATTAACC+AGG - tig0024313:16572-16591 Msa1416030:intron 20.0%
!! ATGAATTAATAAGTAAGCAA+AGG + tig0024313:16708-16727 None:intergenic 20.0%
!!! TTTCAATATTTATTCTGAAG+TGG - tig0024313:16935-16954 Msa1416030:CDS 20.0%
!! TATCAAACACAAAAAATATC+AGG + tig0024313:17426-17445 None:intergenic 20.0%
! TGAGATTATTGTAAAAAGTG+AGG - tig0024313:12578-12597 Msa1416030:three_prime_UTR 25.0%
! GAGATTATTGTAAAAAGTGA+GGG - tig0024313:12579-12598 Msa1416030:three_prime_UTR 25.0%
! TCCTGATGCTTAATATAATA+TGG + tig0024313:12706-12725 None:intergenic 25.0%
! ACTCAATTAATTAAGTGATC+TGG + tig0024313:12936-12955 None:intergenic 25.0%
!!! TAATAACTTTGATCGATTTG+CGG - tig0024313:12959-12978 Msa1416030:CDS 25.0%
!! CTTATTATGTTTTCTGTTGT+TGG - tig0024313:13004-13023 Msa1416030:CDS 25.0%
! ATAAGAACAAGTATTAGACA+TGG + tig0024313:14086-14105 None:intergenic 25.0%
! CATAACTGTAAGTCATATTA+TGG - tig0024313:14166-14185 Msa1416030:intron 25.0%
! AGTTTACAATGTAGAAAAGA+TGG - tig0024313:14206-14225 Msa1416030:intron 25.0%
! TAAAAAACCCATTGATCATT+GGG + tig0024313:14367-14386 None:intergenic 25.0%
! AAATTATGGGTTTCTTACAT+GGG + tig0024313:14439-14458 None:intergenic 25.0%
! TGGAATCAATAGAACAATTT+GGG - tig0024313:14470-14489 Msa1416030:intron 25.0%
! AGAAATCAGACTGATATTAA+AGG - tig0024313:14704-14723 Msa1416030:intron 25.0%
! AGAAACAACTATATAGAAGA+AGG - tig0024313:14769-14788 Msa1416030:intron 25.0%
! ACATAAGAGAAATATATAGG+GGG + tig0024313:14958-14977 None:intergenic 25.0%
! GAACAAAATGAATAACAAAG+AGG + tig0024313:15034-15053 None:intergenic 25.0%
! AAAAAAAAAAGACTTAGGAG+AGG + tig0024313:16191-16210 None:intergenic 25.0%
! TACATGAACAAAAAAAGTGA+TGG + tig0024313:16270-16289 None:intergenic 25.0%
!! TCAGTCTATTTTCTTTCTTA+TGG - tig0024313:16300-16319 Msa1416030:intron 25.0%
! TTCTTTCTTATGGCATTAAT+TGG - tig0024313:16310-16329 Msa1416030:intron 25.0%
!! GGATTCATTAATGTTTTTCA+TGG + tig0024313:16391-16410 None:intergenic 25.0%
!!! TCTTTTGAAGTTTGATTTCT+TGG - tig0024313:16422-16441 Msa1416030:intron 25.0%
! TAACATCAATGCTACTAATA+AGG - tig0024313:17006-17025 Msa1416030:intron 25.0%
!! AAATTTTTCTGCAATGTCAA+GGG + tig0024313:17044-17063 None:intergenic 25.0%
! TATGTTGAAGAGAAAGTAAA+TGG - tig0024313:17358-17377 Msa1416030:CDS 25.0%
! GATCTAAGCTATGATTTAAA+CGG - tig0024313:17849-17868 Msa1416030:five_prime_UTR 25.0%
GAACATATATCTATCTACCT+TGG - tig0024313:12675-12694 Msa1416030:three_prime_UTR 30.0%
AATATAATATGGCTCAACCA+AGG + tig0024313:12695-12714 None:intergenic 30.0%
GCCATATTATATTAAGCATC+AGG - tig0024313:12702-12721 Msa1416030:three_prime_UTR 30.0%
!! GTTTATTATTTCTAGCTTGC+TGG - tig0024313:12889-12908 Msa1416030:CDS 30.0%
!!! CTGCAAGATTCTTTTTTTCT+CGG + tig0024313:13536-13555 None:intergenic 30.0%
AGAAAAAAAGAATCTTGCAG+AGG - tig0024313:13536-13555 Msa1416030:CDS 30.0%
TTTCTTATCAGTCCTAAATC+CGG + tig0024313:13799-13818 None:intergenic 30.0%
! GCAAAATGAAGAAATTTTGC+TGG - tig0024313:13851-13870 Msa1416030:intron 30.0%
! TGAAGAAATTTTGCTGGAAT+TGG - tig0024313:13857-13876 Msa1416030:intron 30.0%
TAAAAGCAAACACCTGATTA+CGG + tig0024313:13959-13978 None:intergenic 30.0%
!!! GCTTATATTTTAGGATTACG+TGG + tig0024313:14147-14166 None:intergenic 30.0%
TTACAATGTAGAAAAGATGG+TGG - tig0024313:14209-14228 Msa1416030:intron 30.0%
TTCACCTACAATTGATCATT+GGG + tig0024313:14299-14318 None:intergenic 30.0%
CTAAAAAACCCATTGATCAT+TGG + tig0024313:14368-14387 None:intergenic 30.0%
GAAATTATGGGTTTCTTACA+TGG + tig0024313:14440-14459 None:intergenic 30.0%
!! ATTGTTCTATTGATTCCAGA+TGG + tig0024313:14468-14487 None:intergenic 30.0%
CTGGAATCAATAGAACAATT+TGG - tig0024313:14469-14488 Msa1416030:intron 30.0%
ATAGAAAATACTGCACATGA+TGG + tig0024313:14497-14516 None:intergenic 30.0%
! CAGTATTTTCTATTTAGTCG+TGG - tig0024313:14504-14523 Msa1416030:intron 30.0%
ACGGTTATTGAAAAAACCAT+GGG - tig0024313:14560-14579 Msa1416030:intron 30.0%
AGTCTGATTTCTATCTAATG+GGG + tig0024313:14696-14715 None:intergenic 30.0%
CAGTCTGATTTCTATCTAAT+GGG + tig0024313:14697-14716 None:intergenic 30.0%
TCAGTCTGATTTCTATCTAA+TGG + tig0024313:14698-14717 None:intergenic 30.0%
CAACTATATAGAAGAAGGAA+TGG - tig0024313:14774-14793 Msa1416030:intron 30.0%
TTTACTCTATCCATCATGTA+AGG + tig0024313:14819-14838 None:intergenic 30.0%
CATGTGAGAAATTAGCATTT+GGG + tig0024313:14910-14929 None:intergenic 30.0%
! AATTTCTCACATGCCTTTTA+CGG - tig0024313:14917-14936 Msa1416030:intron 30.0%
AAATGAATAACAAAGAGGGA+GGG + tig0024313:15029-15048 None:intergenic 30.0%
AAAATGAATAACAAAGAGGG+AGG + tig0024313:15030-15049 None:intergenic 30.0%
TTTAGTTGAAAATAACCCCA+AGG + tig0024313:15168-15187 None:intergenic 30.0%
AACGAAGTAGAAAACTATTG+TGG + tig0024313:16096-16115 None:intergenic 30.0%
ATAAAAGCTCCGATCTTATT+TGG - tig0024313:16342-16361 Msa1416030:intron 30.0%
CTAGAGAAACCAAATAAGAT+CGG + tig0024313:16354-16373 None:intergenic 30.0%
! ATGTTTTTCATGGGAATTGA+TGG + tig0024313:16381-16400 None:intergenic 30.0%
! CTTCAAAAGAATACCGATTA+AGG + tig0024313:16412-16431 None:intergenic 30.0%
! GAAGTTTGATTTCTTGGTTA+AGG - tig0024313:16428-16447 Msa1416030:intron 30.0%
! AGCATCACTATTTTCAACTT+AGG + tig0024313:16481-16500 None:intergenic 30.0%
ACAAATTCAGAGTTCAGATT+TGG + tig0024313:16652-16671 None:intergenic 30.0%
AAAATCACAATGCAAGACAA+GGG + tig0024313:16862-16881 None:intergenic 30.0%
AAAAATCACAATGCAAGACA+AGG + tig0024313:16863-16882 None:intergenic 30.0%
!! TAAAGTTGATACCAAGATAG+TGG - tig0024313:16899-16918 Msa1416030:CDS 30.0%
AAAATTACTCTCCACTATCT+TGG + tig0024313:16913-16932 None:intergenic 30.0%
! AATTTTTCTGCAATGTCAAG+GGG + tig0024313:17043-17062 None:intergenic 30.0%
! CAAATTTTTCTGCAATGTCA+AGG + tig0024313:17045-17064 None:intergenic 30.0%
CTTGACATTGCAGAAAAATT+TGG - tig0024313:17043-17062 Msa1416030:intron 30.0%
TTTCTCTTCAACATATTGAC+CGG + tig0024313:17353-17372 None:intergenic 30.0%
! AAAGTAAATGGCTTTTCACT+TGG - tig0024313:17370-17389 Msa1416030:CDS 30.0%
ACAAAAAATATCAGGAAAGC+TGG + tig0024313:17418-17437 None:intergenic 30.0%
!!! ATTTTTTGTGTTTGATAGCC+TGG - tig0024313:17429-17448 Msa1416030:CDS 30.0%
!! TTGATAATGCTCTCTACAAT+CGG - tig0024313:17658-17677 Msa1416030:intron 30.0%
GATAGATGAGACAAAATTGA+GGG - tig0024313:17711-17730 Msa1416030:intron 30.0%
AAGTGAGGGATAATGTTGAA+AGG - tig0024313:12593-12612 Msa1416030:three_prime_UTR 35.0%
AGTGAGGGATAATGTTGAAA+GGG - tig0024313:12594-12613 Msa1416030:three_prime_UTR 35.0%
! TATGTTTTCTGTTGTTGGGT+TGG - tig0024313:13009-13028 Msa1416030:CDS 35.0%
! GAAAAACAGAAGAGTTTTCG+TGG - tig0024313:13082-13101 Msa1416030:CDS 35.0%
GATACTACTTCAAAACCATG+AGG - tig0024313:13261-13280 Msa1416030:CDS 35.0%
TAGCGAGATACTCAAATACT+TGG - tig0024313:13369-13388 Msa1416030:CDS 35.0%
ATTGGACAAATCTGTAGTCA+TGG + tig0024313:13598-13617 None:intergenic 35.0%
TGTGTGTAAAGCAGTTGAAT+TGG + tig0024313:13616-13635 None:intergenic 35.0%
GGTTTGAATCTGATTCCAAA+AGG + tig0024313:13674-13693 None:intergenic 35.0%
! GGATTTAGGACTGATAAGAA+AGG - tig0024313:13798-13817 Msa1416030:intron 35.0%
! CCTCTAGATTTAAAACTGCT+CGG + tig0024313:13893-13912 None:intergenic 35.0%
ATTGCATATTGCTGCAAAGA+AGG - tig0024313:13932-13951 Msa1416030:intron 35.0%
TTGCATATTGCTGCAAAGAA+GGG - tig0024313:13933-13952 Msa1416030:intron 35.0%
! CTTCTCGTTCATTTTCTACT+AGG + tig0024313:14258-14277 None:intergenic 35.0%
GTTCACCTACAATTGATCAT+TGG + tig0024313:14300-14319 None:intergenic 35.0%
CAATTGTAGGTGAACATGAA+TGG - tig0024313:14305-14324 Msa1416030:intron 35.0%
! ATGAATGGCTTTTCAATTGC+TGG - tig0024313:14320-14339 Msa1416030:intron 35.0%
AATAACCACCCAATGATCAA+TGG - tig0024313:14288-14307 Msa1416030:intron 35.0%
ATAACCACCCAATGATCAAT+GGG - tig0024313:14289-14308 Msa1416030:intron 35.0%
CAGATGGCAAAGGAAATTAT+GGG + tig0024313:14452-14471 None:intergenic 35.0%
!!! GGTTTTTTCAATAACCGTGA+TGG + tig0024313:14558-14577 None:intergenic 35.0%
CACGGTTATTGAAAAAACCA+TGG - tig0024313:14559-14578 Msa1416030:intron 35.0%
!! GATTAAGAAGTGCTTGTACA+GGG - tig0024313:14726-14745 Msa1416030:intron 35.0%
AGGGATTTCACTTTAACAAG+CGG - tig0024313:14745-14764 Msa1416030:intron 35.0%
TATAGAAGAAGGAATGGCAA+TGG - tig0024313:14780-14799 Msa1416030:intron 35.0%
GCATGTGAGAAATTAGCATT+TGG + tig0024313:14911-14930 None:intergenic 35.0%
AGAGAAATATATAGGGGGAA+GGG + tig0024313:14953-14972 None:intergenic 35.0%
AAGAGAAATATATAGGGGGA+AGG + tig0024313:14954-14973 None:intergenic 35.0%
AATGAATAACAAAGAGGGAG+GGG + tig0024313:15028-15047 None:intergenic 35.0%
! ACCAAAAGTGCACACAATTT+AGG - tig0024313:15290-15309 Msa1416030:intron 35.0%
! CCAAAAGTGCACACAATTTA+GGG - tig0024313:15291-15310 Msa1416030:intron 35.0%
CAGTAAAAACTACTTGCCTA+TGG - tig0024313:15409-15428 Msa1416030:intron 35.0%
TAGTATGCACATACTTCCAT+AGG + tig0024313:15428-15447 None:intergenic 35.0%
! TCGTATTCATGCACATTTTG+TGG + tig0024313:15522-15541 None:intergenic 35.0%
GAAAATTCAATAGTCGAGGA+TGG + tig0024313:15994-16013 None:intergenic 35.0%
GGTTGAAAATTCAATAGTCG+AGG + tig0024313:15998-16017 None:intergenic 35.0%
CTACTCAAACCAGAGATAAA+TGG + tig0024313:16226-16245 None:intergenic 35.0%
! TTATCTCTGGTTTGAGTAGT+AGG - tig0024313:16227-16246 Msa1416030:intron 35.0%
AGTAGTAGGTATAAGTTCCT+TGG - tig0024313:16241-16260 Msa1416030:intron 35.0%
AAAAAAAGTGATGGCATCCA+AGG + tig0024313:16261-16280 None:intergenic 35.0%
AGTTAGTATCCTCCTTACTT+TGG - tig0024313:16529-16548 Msa1416030:intron 35.0%
AATACATTGCCAAAGTAAGG+AGG + tig0024313:16541-16560 None:intergenic 35.0%
GGAAATACATTGCCAAAGTA+AGG + tig0024313:16544-16563 None:intergenic 35.0%
TAATAAGAGAGAAACAGACC+TGG + tig0024313:16593-16612 None:intergenic 35.0%
!! CTTATTAGCTTTGTACAGTC+TGG - tig0024313:16606-16625 Msa1416030:CDS 35.0%
!!! TTGTACAGTCTGGTTTGTTT+TGG - tig0024313:16616-16635 Msa1416030:CDS 35.0%
TGAACTCTGAATTTGTGAGA+GGG - tig0024313:16656-16675 Msa1416030:CDS 35.0%
!!! TTCAGTATGGGTTGTTTTTC+AGG + tig0024313:16838-16857 None:intergenic 35.0%
AAATCACAATGCAAGACAAG+GGG + tig0024313:16861-16880 None:intergenic 35.0%
CATCAATGCTACTAATAAGG+CGG - tig0024313:17009-17028 Msa1416030:intron 35.0%
ATCAATGCTACTAATAAGGC+GGG - tig0024313:17010-17029 Msa1416030:intron 35.0%
AGATCTTGTCTCCATAATGA+GGG - tig0024313:17072-17091 Msa1416030:intron 35.0%
! TTTAGTTGCTTTGCTGCATT+TGG + tig0024313:17136-17155 None:intergenic 35.0%
TTCTCTTCAACATATTGACC+GGG + tig0024313:17352-17371 None:intergenic 35.0%
CCAAAGAAATGAATAATGCC+AGG + tig0024313:17450-17469 None:intergenic 35.0%
CCTGGCATTATTCATTTCTT+TGG - tig0024313:17447-17466 Msa1416030:CDS 35.0%
AGTTGTTGTGATTGAGCAAA+AGG - tig0024313:17492-17511 Msa1416030:exon 35.0%
TTGTCATTAACAAGCTCATG+TGG - tig0024313:17533-17552 Msa1416030:intron 35.0%
TGAAGGCAATGGAAATGAAA+AGG + tig0024313:17567-17586 None:intergenic 35.0%
GCTATATATGCTACAGTGAT+TGG - tig0024313:17631-17650 Msa1416030:intron 35.0%
GGATAGATGAGACAAAATTG+AGG - tig0024313:17710-17729 Msa1416030:intron 35.0%
! TTTTGAACGGTGAATACAAG+AGG - tig0024313:17779-17798 Msa1416030:five_prime_UTR 35.0%
GACTACAGAAACAAGTAGAA+AGG - tig0024313:17909-17928 Msa1416030:five_prime_UTR 35.0%
GTTGAAAGGGAAGCTAGAAA+TGG - tig0024313:12607-12626 Msa1416030:three_prime_UTR 40.0%
! GAAGAGTTTTCGTGGATTCA+TGG - tig0024313:13090-13109 Msa1416030:CDS 40.0%
!! TACCGATTCATTTAGCTGCT+CGG - tig0024313:13212-13231 Msa1416030:CDS 40.0%
! TTCTGAGAACGGACATGATT+TGG - tig0024313:13342-13361 Msa1416030:CDS 40.0%
GAAGGGATCATAACCATTTC+TGG + tig0024313:13419-13438 None:intergenic 40.0%
GTCAGAGTTATAGTGAGACA+TGG + tig0024313:13514-13533 None:intergenic 40.0%
CAAACCTTGCAAAAATAGCC+AGG - tig0024313:13688-13707 Msa1416030:intron 40.0%
!!! TGTTCCTGGCTATTTTTGCA+AGG + tig0024313:13695-13714 None:intergenic 40.0%
GCAAAAATAGCCAGGAACAA+TGG - tig0024313:13696-13715 Msa1416030:intron 40.0%
TGTGAAAGCCTTACTAAGCA+AGG - tig0024313:13764-13783 Msa1416030:intron 40.0%
! AGATTTAAAACTGCTCGGTC+AGG + tig0024313:13888-13907 None:intergenic 40.0%
!!! CCGAGCAGTTTTAAATCTAG+AGG - tig0024313:13890-13909 Msa1416030:intron 40.0%
!! ATTATGGCTTGTTTGCACAC+TGG - tig0024313:14182-14201 Msa1416030:intron 40.0%
ACCACCCAATGATCAATTGT+AGG - tig0024313:14292-14311 Msa1416030:intron 40.0%
ACCTACAATTGATCATTGGG+TGG + tig0024313:14296-14315 None:intergenic 40.0%
AAAACCCATTGATCATTGGG+TGG + tig0024313:14364-14383 None:intergenic 40.0%
CCAGATGGCAAAGGAAATTA+TGG + tig0024313:14453-14472 None:intergenic 40.0%
CCATAATTTCCTTTGCCATC+TGG - tig0024313:14450-14469 Msa1416030:intron 40.0%
!! CTATTGATTCCAGATGGCAA+AGG + tig0024313:14462-14481 None:intergenic 40.0%
!! GTGGATTGGAAAAACCATCA+CGG - tig0024313:14541-14560 Msa1416030:intron 40.0%
ACAAGCTCAAATAACTCCCA+TGG + tig0024313:14579-14598 None:intergenic 40.0%
ACATAACAACTAAGCACACC+CGG + tig0024313:14617-14636 None:intergenic 40.0%
TCTAATGGGGTTCCTATCAT+AGG + tig0024313:14683-14702 None:intergenic 40.0%
!! GGATTAAGAAGTGCTTGTAC+AGG - tig0024313:14725-14744 Msa1416030:intron 40.0%
AAGAAGGAATGGCAATGGTT+GGG - tig0024313:14785-14804 Msa1416030:intron 40.0%
AGAAATTAGCATTTGGGCTC+GGG + tig0024313:14904-14923 None:intergenic 40.0%
GAGAAATTAGCATTTGGGCT+CGG + tig0024313:14905-14924 None:intergenic 40.0%
TGAGCGAAGAAGAGAGATAA+GGG + tig0024313:14986-15005 None:intergenic 40.0%
ATGAGCGAAGAAGAGAGATA+AGG + tig0024313:14987-15006 None:intergenic 40.0%
! TGGGTTGAATTATCTGTCCT+TGG - tig0024313:15148-15167 Msa1416030:intron 40.0%
GGGTTGAATTATCTGTCCTT+GGG - tig0024313:15149-15168 Msa1416030:intron 40.0%
GGTTGAATTATCTGTCCTTG+GGG - tig0024313:15150-15169 Msa1416030:intron 40.0%
AAAATATAGTCCCTGCTCCA+AGG - tig0024313:15223-15242 Msa1416030:intron 40.0%
! CCCTAAATTGTGTGCACTTT+TGG + tig0024313:15294-15313 None:intergenic 40.0%
ATCATGCTAATCGAGATACC+AGG + tig0024313:15348-15367 None:intergenic 40.0%
TGAATACGAACACAGAGACA+AGG - tig0024313:15533-15552 Msa1416030:intron 40.0%
GACAAGGACAAACTCAATAC+AGG - tig0024313:15549-15568 Msa1416030:intron 40.0%
TCTCAGCTGTATCTTCTTTC+TGG - tig0024313:15920-15939 Msa1416030:intron 40.0%
ACGTGAAAGTCACACATTAC+CGG - tig0024313:16120-16139 Msa1416030:intron 40.0%
ACTAAAATCTGAAGACAGGC+CGG + tig0024313:16142-16161 None:intergenic 40.0%
CGCAACTAAAATCTGAAGAC+AGG + tig0024313:16146-16165 None:intergenic 40.0%
!!! AGATTTTAGTTGCGCCTCTT+TGG - tig0024313:16152-16171 Msa1416030:intron 40.0%
CTGAACTCTGAATTTGTGAG+AGG - tig0024313:16655-16674 Msa1416030:CDS 40.0%
AAGGAGAAATAATCTGCAGG+AGG + tig0024313:16689-16708 None:intergenic 40.0%
GCAAAGGAGAAATAATCTGC+AGG + tig0024313:16692-16711 None:intergenic 40.0%
!! TGTTGGCTGCATTCTTTTGA+TGG - tig0024313:16735-16754 Msa1416030:CDS 40.0%
!!! TGTTTTTCAGGCTGATTGGT+GGG + tig0024313:16826-16845 None:intergenic 40.0%
!!! TTGTTTTTCAGGCTGATTGG+TGG + tig0024313:16827-16846 None:intergenic 40.0%
CTCATTATGGAGACAAGATC+TGG + tig0024313:17073-17092 None:intergenic 40.0%
CAGATCTTGTCTCCATAATG+AGG - tig0024313:17071-17090 Msa1416030:intron 40.0%
! TCAGCTTCTTAGCGATTTTC+TGG + tig0024313:17231-17250 None:intergenic 40.0%
CTGAAGAAACTCCACATAAG+TGG - tig0024313:17247-17266 Msa1416030:CDS 40.0%
TCTCTTCAACATATTGACCG+GGG + tig0024313:17351-17370 None:intergenic 40.0%
ATTCATTTCTTTGGCTGTCG+TGG - tig0024313:17456-17475 Msa1416030:CDS 40.0%
AGTGAGAGAAATGAAGGCAA+TGG + tig0024313:17578-17597 None:intergenic 40.0%
CACGTAAGTGAGAGAAATGA+AGG + tig0024313:17584-17603 None:intergenic 40.0%
CTTCATTTCTCTCACTTACG+TGG - tig0024313:17582-17601 Msa1416030:intron 40.0%
CAGAATGACACAATAGCACA+TGG + tig0024313:17686-17705 None:intergenic 40.0%
! GCTATTGTGTCATTCTGCAT+AGG - tig0024313:17689-17708 Msa1416030:intron 40.0%
TATGCGACATGGAGAAAGAA+CGG + tig0024313:17744-17763 None:intergenic 40.0%
! TCAGACCAGGAGATTTTGAA+CGG - tig0024313:17766-17785 Msa1416030:intron 40.0%
ATTCACCGTTCAAAATCTCC+TGG + tig0024313:17774-17793 None:intergenic 40.0%
TCATAGCTTAGATCGTAGCT+TGG + tig0024313:17843-17862 None:intergenic 40.0%
GCAACAGCAAGCATCAAAGA+CGG - tig0024313:12776-12795 Msa1416030:CDS 45.0%
! GAGAAGTTTTCGCGTTGTCA+TGG - tig0024313:13120-13139 Msa1416030:CDS 45.0%
AAGTGAGAGGAAGAAGAGCA+AGG - tig0024313:13165-13184 Msa1416030:CDS 45.0%
AAGAAGAGCAAGGAATCACC+TGG - tig0024313:13175-13194 Msa1416030:CDS 45.0%
AGAAGAGCAAGGAATCACCT+GGG - tig0024313:13176-13195 Msa1416030:CDS 45.0%
! ACCGATTCATTTAGCTGCTC+GGG - tig0024313:13213-13232 Msa1416030:CDS 45.0%
TCAAAACCATGAGGCAGCAA+AGG - tig0024313:13270-13289 Msa1416030:CDS 45.0%
TCTCAGAAGCGACGTAAAGA+GGG + tig0024313:13330-13349 None:intergenic 45.0%
TTCTCAGAAGCGACGTAAAG+AGG + tig0024313:13331-13350 None:intergenic 45.0%
! CTTTACGTCGCTTCTGAGAA+CGG - tig0024313:13331-13350 Msa1416030:CDS 45.0%
GCTTCTATTGTCGCCAGAAA+TGG - tig0024313:13403-13422 Msa1416030:CDS 45.0%
TGCTTTGCAGCAACATGGAA+GGG + tig0024313:13436-13455 None:intergenic 45.0%
TTCCATGTTGCTGCAAAGCA+GGG - tig0024313:13436-13455 Msa1416030:CDS 45.0%
TCTGTAGTCATGGCCAAGTT+GGG + tig0024313:13588-13607 None:intergenic 45.0%
ATCTGTAGTCATGGCCAAGT+TGG + tig0024313:13589-13608 None:intergenic 45.0%
! TGACGTCGTGAATCTCCTTT+TGG - tig0024313:13656-13675 Msa1416030:intron 45.0%
GACAGTCTTACCATTGTTCC+TGG + tig0024313:13709-13728 None:intergenic 45.0%
TAAGACTGTCCTTCACTCTG+CGG - tig0024313:13719-13738 Msa1416030:intron 45.0%
GCTTGGATCCTTGCTTAGTA+AGG + tig0024313:13775-13794 None:intergenic 45.0%
AGGTCAAACTGCACTACACA+TGG - tig0024313:13818-13837 Msa1416030:intron 45.0%
CACTACACATGGCTGTGAAA+GGG - tig0024313:13829-13848 Msa1416030:intron 45.0%
!! AGGATCTGACTTTCAGGTTC+GGG + tig0024313:14395-14414 None:intergenic 45.0%
!! GAGGATCTGACTTTCAGGTT+CGG + tig0024313:14396-14415 None:intergenic 45.0%
CAGAAGAGGATCTGACTTTC+AGG + tig0024313:14401-14420 None:intergenic 45.0%
AAAGTCAGATCCTCTTCTGC+AGG - tig0024313:14402-14421 Msa1416030:intron 45.0%
AGATCCTCTTCTGCAGGTTT+AGG - tig0024313:14408-14427 Msa1416030:intron 45.0%
TTAGTCGTGGACCATCTACT+TGG - tig0024313:14517-14536 Msa1416030:intron 45.0%
ACCATCTACTTGGAGTGGAT+TGG - tig0024313:14527-14546 Msa1416030:intron 45.0%
TCCAATCCACTCCAAGTAGA+TGG + tig0024313:14531-14550 None:intergenic 45.0%
GAAGAAGGAATGGCAATGGT+TGG - tig0024313:14784-14803 Msa1416030:intron 45.0%
AGAAGGAATGGCAATGGTTG+GGG - tig0024313:14786-14805 Msa1416030:intron 45.0%
! GTCGGCTTTCTCTCAGAATA+GGG + tig0024313:14860-14879 None:intergenic 45.0%
GAAATTAGCATTTGGGCTCG+GGG + tig0024313:14903-14922 None:intergenic 45.0%
GGGTAAGTGGTAACCGTAAA+AGG + tig0024313:14933-14952 None:intergenic 45.0%
TATATAGGGGGAAGGGTAAG+TGG + tig0024313:14946-14965 None:intergenic 45.0%
GAGCGAAGAAGAGAGATAAG+GGG + tig0024313:14985-15004 None:intergenic 45.0%
ATGCACAACTGTATGTCCAC+CGG - tig0024313:15068-15087 Msa1416030:intron 45.0%
GGTCATCATGCTTCAAGCTA+TGG + tig0024313:15097-15116 None:intergenic 45.0%
CTTATGTTTCGTGCACAGCT+CGG + tig0024313:15118-15137 None:intergenic 45.0%
! AGTGCACACAATTTAGGGTG+AGG - tig0024313:15296-15315 Msa1416030:intron 45.0%
! TTTAGGGTGAGGACGACAAT+CGG - tig0024313:15307-15326 Msa1416030:intron 45.0%
!!! CGGGTTGCTTTTTGTTATCC+TGG - tig0024313:15327-15346 Msa1416030:intron 45.0%
ACAAAGTCCAGACTTGATGG+AGG + tig0024313:15875-15894 None:intergenic 45.0%
CAGACAAAGTCCAGACTTGA+TGG + tig0024313:15878-15897 None:intergenic 45.0%
CTGAGATTTACCATGACAGG+AGG + tig0024313:15906-15925 None:intergenic 45.0%
CAGCTGAGATTTACCATGAC+AGG + tig0024313:15909-15928 None:intergenic 45.0%
CAACCAAAAAGACCACCCTT+AGG - tig0024313:16013-16032 Msa1416030:intron 45.0%
! GAACCTAAGGGTGGTCTTTT+TGG + tig0024313:16019-16038 None:intergenic 45.0%
GTAGGAAGAGGTGAACCTAA+GGG + tig0024313:16031-16050 None:intergenic 45.0%
AGTAGGAAGAGGTGAACCTA+AGG + tig0024313:16032-16051 None:intergenic 45.0%
TAGGTTCACCTCTTCCTACT+TGG - tig0024313:16032-16051 Msa1416030:intron 45.0%
TGTTACAGCCAAGTAGGAAG+AGG + tig0024313:16043-16062 None:intergenic 45.0%
ACATCGTGTTACAGCCAAGT+AGG + tig0024313:16049-16068 None:intergenic 45.0%
GGCACATCACCATTTATCTC+TGG - tig0024313:16214-16233 Msa1416030:intron 45.0%
!!! GTTTTTCAGGCTGATTGGTG+GGG + tig0024313:16825-16844 None:intergenic 45.0%
!!! GGGTTGTTTTTCAGGCTGAT+TGG + tig0024313:16830-16849 None:intergenic 45.0%
CAAGACAAGGGGTTCAGTAT+GGG + tig0024313:16850-16869 None:intergenic 45.0%
!! TACCCTCCGTTGATAACAAG+CGG + tig0024313:16985-17004 None:intergenic 45.0%
TCTCCATAATGAGGGATGCT+GGG - tig0024313:17080-17099 Msa1416030:intron 45.0%
CTGTTAATTCCACCGACCAA+GGG - tig0024313:17104-17123 Msa1416030:intron 45.0%
ATTTGGAGGTTTCCCTTGGT+CGG + tig0024313:17119-17138 None:intergenic 45.0%
! AGTTGCTTTGCTGCATTTGG+AGG + tig0024313:17133-17152 None:intergenic 45.0%
CATTGTTCAGGCCACTTATG+TGG + tig0024313:17261-17280 None:intergenic 45.0%
CAGAGGTAATCGCATTGTTC+AGG + tig0024313:17273-17292 None:intergenic 45.0%
AACAGCAACAACAGTAGCAG+AGG + tig0024313:17290-17309 None:intergenic 45.0%
CATTAACAAGCTCATGTGGC+TGG - tig0024313:17537-17556 Msa1416030:intron 45.0%
TTCTCTCACTTACGTGGTAG+TGG - tig0024313:17588-17607 Msa1416030:intron 45.0%
TCTCTCACTTACGTGGTAGT+GGG - tig0024313:17589-17608 Msa1416030:intron 45.0%
CATGGAGAAAGAACGGCTTT+CGG + tig0024313:17737-17756 None:intergenic 45.0%
CAAGAGGATGTACGCACTTT+AGG - tig0024313:17795-17814 Msa1416030:five_prime_UTR 45.0%
! GTTTTCGCGTTGTCATGGAG+AGG - tig0024313:13125-13144 Msa1416030:CDS 50.0%
TGAGCTTCATGGGAAGTGAG+AGG - tig0024313:13152-13171 Msa1416030:CDS 50.0%
AAGGAATCACCTGGGAAACG+TGG - tig0024313:13184-13203 Msa1416030:CDS 50.0%
GCCCGAGCAGCTAAATGAAT+CGG + tig0024313:13217-13236 None:intergenic 50.0%
ATTCATTTAGCTGCTCGGGC+TGG - tig0024313:13217-13236 Msa1416030:CDS 50.0%
TTCATTTAGCTGCTCGGGCT+GGG - tig0024313:13218-13237 Msa1416030:CDS 50.0%
ACAAGTCCTTTGCTGCCTCA+TGG + tig0024313:13279-13298 None:intergenic 50.0%
TGAGGCAGCAAAGGACTTGT+TGG - tig0024313:13279-13298 Msa1416030:CDS 50.0%
TTGGCAAAGCAGAACCTCGA+GGG - tig0024313:13298-13317 Msa1416030:CDS 50.0%
CTCAGAAGCGACGTAAAGAG+GGG + tig0024313:13329-13348 None:intergenic 50.0%
CTGCTTTGCAGCAACATGGA+AGG + tig0024313:13437-13456 None:intergenic 50.0%
CTTCCATGTTGCTGCAAAGC+AGG - tig0024313:13435-13454 Msa1416030:CDS 50.0%
! GCTGCACTCTTTTCCCAACT+TGG - tig0024313:13572-13591 Msa1416030:CDS 50.0%
TTACACACAGCTGCTACCCA+AGG - tig0024313:13627-13646 Msa1416030:intron 50.0%
CACGACGTCAATGTGACCTT+GGG + tig0024313:13646-13665 None:intergenic 50.0%
TCACGACGTCAATGTGACCT+TGG + tig0024313:13647-13666 None:intergenic 50.0%
CTTCACTCTGCGGCTAGAAT+GGG - tig0024313:13729-13748 Msa1416030:intron 50.0%
TTCACTCTGCGGCTAGAATG+GGG - tig0024313:13730-13749 Msa1416030:intron 50.0%
CTAAGCAAGGATCCAAGCAC+CGG - tig0024313:13777-13796 Msa1416030:intron 50.0%
!! AGGATCCAAGCACCGGATTT+AGG - tig0024313:13784-13803 Msa1416030:intron 50.0%
TCAGTCCTAAATCCGGTGCT+TGG + tig0024313:13792-13811 None:intergenic 50.0%
GCACTACACATGGCTGTGAA+AGG - tig0024313:13828-13847 Msa1416030:intron 50.0%
TGCAAAGAAGGGCCGTAATC+AGG - tig0024313:13944-13963 Msa1416030:intron 50.0%
CATGCCTAAACCTGCAGAAG+AGG + tig0024313:14415-14434 None:intergenic 50.0%
TAACAACTAAGCACACCCGG+CGG + tig0024313:14614-14633 None:intergenic 50.0%
TAATGTCTTCGGCTCCGTGT+TGG - tig0024313:14643-14662 Msa1416030:intron 50.0%
CGCTGCCAATAGTACCAACA+CGG + tig0024313:14660-14679 None:intergenic 50.0%
CTATTGGCAGCGCCTATGAT+AGG - tig0024313:14668-14687 Msa1416030:intron 50.0%
GAAGGAATGGCAATGGTTGG+GGG - tig0024313:14787-14806 Msa1416030:intron 50.0%
GGGGTAAGCACCTTACATGA+TGG - tig0024313:14806-14825 Msa1416030:intron 50.0%
! GGTCGGCTTTCTCTCAGAAT+AGG + tig0024313:14861-14880 None:intergenic 50.0%
GAATAACAAAGAGGGAGGGG+AGG + tig0024313:15025-15044 None:intergenic 50.0%
TGCACAACTGTATGTCCACC+GGG - tig0024313:15069-15088 Msa1416030:intron 50.0%
ATGCTTCAAGCTATGGACCC+CGG + tig0024313:15090-15109 None:intergenic 50.0%
! CTTCAGATAGCCTTGGAGCA+GGG + tig0024313:15236-15255 None:intergenic 50.0%
! TCTTCAGATAGCCTTGGAGC+AGG + tig0024313:15237-15256 None:intergenic 50.0%
CTCCAAGGCTATCTGAAGAC+AGG - tig0024313:15238-15257 Msa1416030:intron 50.0%
AGCCTGTCTTCAGATAGCCT+TGG + tig0024313:15243-15262 None:intergenic 50.0%
TTAGGGTGAGGACGACAATC+GGG - tig0024313:15308-15327 Msa1416030:intron 50.0%
ACTTCAGCCTCCATCAAGTC+TGG - tig0024313:15865-15884 Msa1416030:intron 50.0%
GTCTGAATCTCCTCCTGTCA+TGG - tig0024313:15893-15912 Msa1416030:intron 50.0%
CAATAGTCGAGGATGGTGAC+TGG + tig0024313:15987-16006 None:intergenic 50.0%
GCAAGACAAGGGGTTCAGTA+TGG + tig0024313:16851-16870 None:intergenic 50.0%
!! TGTCCGCCGCTTGTTATCAA+CGG - tig0024313:16976-16995 Msa1416030:CDS 50.0%
GTCTCCATAATGAGGGATGC+TGG - tig0024313:17079-17098 Msa1416030:intron 50.0%
CTCCATAATGAGGGATGCTG+GGG - tig0024313:17081-17100 Msa1416030:intron 50.0%
GCTGTTAATTCCACCGACCA+AGG - tig0024313:17103-17122 Msa1416030:intron 50.0%
CTGCATTTGGAGGTTTCCCT+TGG + tig0024313:17123-17142 None:intergenic 50.0%
CATTTCTTTGGCTGTCGTGG+TGG - tig0024313:17459-17478 Msa1416030:CDS 50.0%
TAGTGGGATCACACTCACGA+TGG - tig0024313:17605-17624 Msa1416030:intron 50.0%
CTGGTCTGATGTATGCGACA+TGG + tig0024313:17755-17774 None:intergenic 50.0%
CATGTCGCATACATCAGACC+AGG - tig0024313:17753-17772 Msa1416030:intron 50.0%
GAGAGGCAGCTGAGCTTCAT+GGG - tig0024313:13142-13161 Msa1416030:CDS 55.0%
GTTGGCAAAGCAGAACCTCG+AGG - tig0024313:13297-13316 Msa1416030:CDS 55.0%
TGGCAAAGCAGAACCTCGAG+GGG - tig0024313:13299-13318 Msa1416030:CDS 55.0%
GACCCTGCTTTGCAGCAACA+TGG + tig0024313:13441-13460 None:intergenic 55.0%
GCTGCAAAGCAGGGTCATCT+TGG - tig0024313:13445-13464 Msa1416030:CDS 55.0%
CCATTCTAGCCGCAGAGTGA+AGG + tig0024313:13731-13750 None:intergenic 55.0%
CCTTCACTCTGCGGCTAGAA+TGG - tig0024313:13728-13747 Msa1416030:intron 55.0%
! TGCGGCTAGAATGGGGCATT+TGG - tig0024313:13737-13756 Msa1416030:intron 55.0%
CGTGGACCATCTACTTGGAG+TGG - tig0024313:14522-14541 Msa1416030:intron 55.0%
! TTGTTTGTTGCCTGTGCCGC+CGG - tig0024313:14595-14614 Msa1416030:intron 55.0%
! CGGCTCCGTGTTGGTACTAT+TGG - tig0024313:14652-14671 Msa1416030:intron 55.0%
!! TTGGCTCTGAGAAGCGAGGT+CGG + tig0024313:14878-14897 None:intergenic 55.0%
!! GGTATTGGCTCTGAGAAGCG+AGG + tig0024313:14882-14901 None:intergenic 55.0%
AGCATTTGGGCTCGGGGTAT+TGG + tig0024313:14897-14916 None:intergenic 55.0%
GCACAACTGTATGTCCACCG+GGG - tig0024313:15070-15089 Msa1416030:intron 55.0%
GGAAGAGGTGAACCTAAGGG+TGG + tig0024313:16028-16047 None:intergenic 55.0%
GCTCACGAGCAGTTCCAAAG+AGG + tig0024313:16169-16188 None:intergenic 55.0%
!! CCTCCGTTGATAACAAGCGG+CGG + tig0024313:16982-17001 None:intergenic 55.0%
!! CGCCGCTTGTTATCAACGGA+GGG - tig0024313:16980-16999 Msa1416030:CDS 55.0%
AGCCCCAGCATCCCTCATTA+TGG + tig0024313:17086-17105 None:intergenic 55.0%
CTGGCGTGTCTGTTGGAGTT+GGG + tig0024313:17194-17213 None:intergenic 55.0%
TCTGGCGTGTCTGTTGGAGT+TGG + tig0024313:17195-17214 None:intergenic 55.0%
ACTCCAACAGACACGCCAGA+CGG - tig0024313:17195-17214 Msa1416030:CDS 55.0%
TTGACCGGGGACAGTGAAGA+TGG + tig0024313:17338-17357 None:intergenic 55.0%
GGAGAGGCAGCTGAGCTTCA+TGG - tig0024313:13141-13160 Msa1416030:CDS 60.0%
GGTAAGTCGCCACGTTTCCC+AGG + tig0024313:13196-13215 None:intergenic 60.0%
GGCAAAGCAGAACCTCGAGG+GGG - tig0024313:13300-13319 Msa1416030:CDS 60.0%
! TGTTTGTTGCCTGTGCCGCC+GGG - tig0024313:14596-14615 Msa1416030:intron 60.0%
AGGGGAGGAGAGGAACGTGT+GGG + tig0024313:15010-15029 None:intergenic 60.0%
ACAAAGAGGGAGGGGAGGAG+AGG + tig0024313:15020-15039 None:intergenic 60.0%
CTTCAAGCTATGGACCCCGG+TGG + tig0024313:15087-15106 None:intergenic 60.0%
!! CCGCCGCTTGTTATCAACGG+AGG - tig0024313:16979-16998 Msa1416030:CDS 60.0%
TGGAGGTTTCCCTTGGTCGG+TGG + tig0024313:17116-17135 None:intergenic 60.0%
CTCCAACAGACACGCCAGAC+GGG - tig0024313:17196-17215 Msa1416030:CDS 60.0%
GCAGCCATCTTCACTGTCCC+CGG - tig0024313:17331-17350 Msa1416030:CDS 60.0%
AAAGAGGGGTCTCCCCCTCG+AGG + tig0024313:13315-13334 None:intergenic 65.0%
GAGGGGAGGAGAGGAACGTG+TGG + tig0024313:15011-15030 None:intergenic 65.0%
TGCCCGTCTGGCGTGTCTGT+TGG + tig0024313:17201-17220 None:intergenic 65.0%
AGACACGCCAGACGGGCATG+AGG - tig0024313:17203-17222 Msa1416030:CDS 65.0%
GACACGCCAGACGGGCATGA+GGG - tig0024313:17204-17223 Msa1416030:CDS 65.0%
TCTGGACCCTCATGCCCGTC+TGG + tig0024313:17213-17232 None:intergenic 65.0%
CTAAGCACACCCGGCGGCAC+AGG + tig0024313:14608-14627 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0024313 gene 12559 18012 12559 ID=Msa1416030;Name=Msa1416030
tig0024313 mRNA 12559 18012 12559 ID=Msa1416030-mRNA-1;Parent=Msa1416030;Name=Msa1416030-mRNA-1;_AED=0.13;_eAED=0.13;_QI=278|1|1|1|0.5|0.2|5|163|546
tig0024313 exon 12559 12637 12559 ID=Msa1416030-mRNA-1:exon:22744;Parent=Msa1416030-mRNA-1
tig0024313 exon 12671 13597 12671 ID=Msa1416030-mRNA-1:exon:22743;Parent=Msa1416030-mRNA-1
tig0024313 exon 16606 17015 16606 ID=Msa1416030-mRNA-1:exon:22742;Parent=Msa1416030-mRNA-1
tig0024313 exon 17105 17531 17105 ID=Msa1416030-mRNA-1:exon:22741;Parent=Msa1416030-mRNA-1
tig0024313 exon 17774 18012 17774 ID=Msa1416030-mRNA-1:exon:22740;Parent=Msa1416030-mRNA-1
tig0024313 five_prime_UTR 17774 18012 17774 ID=Msa1416030-mRNA-1:five_prime_utr;Parent=Msa1416030-mRNA-1
tig0024313 five_prime_UTR 17493 17531 17493 ID=Msa1416030-mRNA-1:five_prime_utr;Parent=Msa1416030-mRNA-1
tig0024313 CDS 17105 17492 17105 ID=Msa1416030-mRNA-1:cds;Parent=Msa1416030-mRNA-1
tig0024313 CDS 16606 17015 16606 ID=Msa1416030-mRNA-1:cds;Parent=Msa1416030-mRNA-1
tig0024313 CDS 12755 13597 12755 ID=Msa1416030-mRNA-1:cds;Parent=Msa1416030-mRNA-1
tig0024313 three_prime_UTR 12671 12754 12671 ID=Msa1416030-mRNA-1:three_prime_utr;Parent=Msa1416030-mRNA-1
tig0024313 three_prime_UTR 12559 12637 12559 ID=Msa1416030-mRNA-1:three_prime_utr;Parent=Msa1416030-mRNA-1
Gene Sequence

>Msa1416030

ATGGAAAAACAGAAGAGTTTTCGTGGATTCATGGAGAAACAGAGAAGTTTTCGCGTTGTCATGGAGAGGCAGCTGAGCTTCATGGGAAGTGAGAGGAAGAAGAGCAAGGAATCACCTGGGAAACGTGGCGACTTACCGATTCATTTAGCTGCTCGGGCTGGGAACTTGACTAGAGTCAAAGAGATACTACTTCAAAACCATGAGGCAGCAAAGGACTTGTTGGCAAAGCAGAACCTCGAGGGGGAGACCCCTCTTTACGTCGCTTCTGAGAACGGACATGATTTGGTTGTTAGCGAGATACTCAAATACTTGGACTTGCAAACTGCTTCTATTGTCGCCAGAAATGGTTATGATCCCTTCCATGTTGCTGCAAAGCAGGGTCATCTTGAGGTGCTGAGAGAACTGCTGCACTCTTTTCCCAACTTGGCCATGACTACAGATTTGTCCAATTCAACTGCTTTACACACAGCTGCTACCCAAGGTCACATTGACGTCGTGAATCTCCTTTTGGAATCAGATTCAAACCTTGCAAAAATAGCCAGGAACAATGGTAAGACTGTCCTTCACTCTGCGGCTAGAATGGGGCATTTGGAAGTTGTGAAAGCCTTACTAAGCAAGGATCCAAGCACCGGATTTAGGACTGATAAGAAAGGTCAAACTGCACTACACATGGCTGTGAAAGGGCAAAATGAAGAAATTTTGCTGGAATTGGTGAAACCTGACCGAGCAGTTTTAAATCTAGAGGATAATAAAGGAAATACAGCATTGCATATTGCTGCAAAGAAGGGCCGTAATCAGAATGTCCGCCGCTTGTTATCAACGGAGGGTATTAACATCAATGCTACTAATAAGGCGGGAGAGACTCCCCTTGACATTGCAGAAAAATTTGGTAGTCCAGATCTTGTCTCCATAATGAGGGATGCTGGGGCTGTTAATTCCACCGACCAAGGGAAACCTCCAAATGCAGCAAAGCAACTAAAGCAGACTGTCAGCGACATAAAGCATGATGTGCAATCCCAACTCCAACAGACACGCCAGACGGGCATGAGGGTCCAGAAAATCGCTAAGAAGCTGAAGAAACTCCACATAAGTGGCCTGAACAATGCGATTACCTCTGCTACTGTTGTTGCTGTTCTCATTGCTACAGTTGCTTTTGCAGCCATCTTCACTGTCCCCGGTCAATATGTTGAAGAGAAAGTAAATGGCTTTTCACTTGGACAAGCAACTATAGCGAACAATCCAGCTTTCCTGATATTTTTTGTGTTTGATAGCCTGGCATTATTCATTTCTTTGGCTGTCGTGGTGGTTCAAACTTCAGTTGTTGTGATTGAGCAAAAGGCAAAGAAGCAGCTTGTTTTTGTCATTAACAAGCTCATGTGGCTGGCTTGCCTTTTCATTTCCATTGCCTTCATTTCTCTCACTTACGTGGTAGTGGGATCACACTCACGATGGCTTGCTATATATGCTACAGTGATTGGAAGCTTGATAATGCTCTCTACAATCGGTTCCATGTGCTATTGTGTCATTCTGCATAGGATAGATGAGACAAAATTGAGGGCCGAAAGCCGTTCTTTCTCCATGTCGCATACATCAGACCAGGAGATTTTGAACGGTGAATACAAGAGGATGTACGCACTTTAG
Protein sequence

>Msa1416030

MEKQKSFRGFMEKQRSFRVVMERQLSFMGSERKKSKESPGKRGDLPIHLAARAGNLTRVKEILLQNHEAAKDLLAKQNLEGETPLYVASENGHDLVVSEILKYLDLQTASIVARNGYDPFHVAAKQGHLEVLRELLHSFPNLAMTTDLSNSTALHTAATQGHIDVVNLLLESDSNLAKIARNNGKTVLHSAARMGHLEVVKALLSKDPSTGFRTDKKGQTALHMAVKGQNEEILLELVKPDRAVLNLEDNKGNTALHIAAKKGRNQNVRRLLSTEGININATNKAGETPLDIAEKFGSPDLVSIMRDAGAVNSTDQGKPPNAAKQLKQTVSDIKHDVQSQLQQTRQTGMRVQKIAKKLKKLHISGLNNAITSATVVAVLIATVAFAAIFTVPGQYVEEKVNGFSLGQATIANNPAFLIFFVFDSLALFISLAVVVVQTSVVVIEQKAKKQLVFVINKLMWLACLFISIAFISLTYVVVGSHSRWLAIYATVIGSLIMLSTIGSMCYCVILHRIDETKLRAESRSFSMSHTSDQEILNGEYKRMYAL*