Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1416530 | sp|Q9ZSS6|THD1_ARATH | 76.504 | 532 | 121 | 2 | 72 | 600 | 62 | 592 | 0.0 | 797 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1416530 | G7I9D6 | 95.537 | 605 | 22 | 2 | 1 | 600 | 1 | 605 | 0.0 | 1189 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0025270 | Msa1416530 | 0.890884 | 6.574934e-74 | -8.615850e-47 |
| Msa0072700 | Msa1416530 | 0.951626 | 1.373977e-109 | -8.615850e-47 |
| Msa1022970 | Msa1416530 | 0.809832 | 1.556977e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1416530 | MtrunA17_Chr1g0179661 | 92.775 | 609 | 33 | 3 | 1 | 598 | 1 | 609 | 0.0 | 1107 |
| Msa1416530 | MtrunA17_Chr8g0386671 | 29.677 | 310 | 199 | 5 | 113 | 412 | 24 | 324 | 3.69e-36 | 138 |
| Msa1416530 | MtrunA17_Chr7g0265651 | 31.095 | 283 | 180 | 6 | 138 | 412 | 43 | 318 | 1.26e-31 | 125 |
| Msa1416530 | MtrunA17_Chr1g0177211 | 29.139 | 302 | 189 | 6 | 122 | 413 | 29 | 315 | 6.34e-24 | 103 |
| Msa1416530 | MtrunA17_Chr7g0265841 | 32.022 | 178 | 116 | 4 | 238 | 412 | 45 | 220 | 3.14e-21 | 92.8 |
| Msa1416530 | MtrunA17_Chr4g0045771 | 29.319 | 191 | 113 | 6 | 137 | 312 | 72 | 255 | 4.70e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1416530 | AT3G10050.1 | 76.504 | 532 | 121 | 2 | 72 | 600 | 62 | 592 | 0.0 | 797 |
| Msa1416530 | AT4G11640.1 | 31.250 | 304 | 190 | 4 | 122 | 415 | 29 | 323 | 6.87e-32 | 126 |
Find 185 sgRNAs with CRISPR-Local
Find 439 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCAAAGCACCAGGTCTTTC+TGG | 0.204169 | tig0024360:+15284 | None:intergenic |
| AGAAAGCTGTTGTTCTTTAC+AGG | 0.220056 | tig0024360:-15978 | Msa1416530:intron |
| TGTTCACAGGTGAAGATAAT+TGG | 0.222912 | tig0024360:-17590 | Msa1416530:intron |
| CATTACGACCATCAGAAATT+TGG | 0.259275 | tig0024360:+13215 | None:intergenic |
| TCATGGCCAAAGAGTGGTTT+TGG | 0.273388 | tig0024360:-17525 | Msa1416530:CDS |
| GCAGGCGCTCTTGCTCTTGC+TGG | 0.290001 | tig0024360:-16321 | Msa1416530:CDS |
| TGATCATCCCGATGTCATTA+TGG | 0.291301 | tig0024360:-17840 | Msa1416530:CDS |
| GAAGCATACTGCAAGTATTA+TGG | 0.291652 | tig0024360:-16294 | Msa1416530:CDS |
| GGTGCTACTGTGGTCCTTAT+TGG | 0.302177 | tig0024360:-17938 | Msa1416530:CDS |
| TAAACTTCCAAAGGATGTTT+TGG | 0.314115 | tig0024360:-18387 | Msa1416530:CDS |
| GCCGCCGGAGACTCAATAAT+TGG | 0.322575 | tig0024360:+19309 | None:intergenic |
| GACTAGTATACTTACTTCTA+AGG | 0.323743 | tig0024360:-19160 | Msa1416530:CDS |
| CCTTTCTCCAAAACATCCTT+TGG | 0.326655 | tig0024360:+18380 | None:intergenic |
| ATCGTAGCGCCTCCATGGTT+TGG | 0.327161 | tig0024360:+19475 | None:intergenic |
| GGAGGTGGTGGTCTCATTGC+TGG | 0.328700 | tig0024360:-17746 | Msa1416530:CDS |
| ACATTGTTGGACAATAAATA+TGG | 0.331590 | tig0024360:-13299 | Msa1416530:three_prime_UTR |
| CAGAAATTTGGTCAAGTAGA+AGG | 0.336101 | tig0024360:+13227 | None:intergenic |
| AAATGTATTAGTTGGAATTC+AGG | 0.343393 | tig0024360:-15072 | Msa1416530:CDS |
| AATGGTTTGAAACGAGGGTT+AGG | 0.357051 | tig0024360:+19384 | None:intergenic |
| GATCATCCCGATGTCATTAT+GGG | 0.362274 | tig0024360:-17839 | Msa1416530:CDS |
| GTTCACAGGTGAAGATAATT+GGG | 0.369464 | tig0024360:-17589 | Msa1416530:intron |
| CATGAACTGGACGCTTCATC+TGG | 0.370349 | tig0024360:+17786 | None:intergenic |
| CGTAATGGAAATCGAATATC+AGG | 0.370920 | tig0024360:-13199 | Msa1416530:three_prime_UTR |
| TGTTGAATCTCCTCTTGAAT+TGG | 0.375609 | tig0024360:-19124 | Msa1416530:CDS |
| TTCTAACCTGTGCACGGTAA+TGG | 0.384917 | tig0024360:+15216 | None:intergenic |
| CATCATAGGAATCTCCAATA+AGG | 0.388925 | tig0024360:+17924 | None:intergenic |
| TCGTAGCGCCTCCATGGTTT+GGG | 0.390256 | tig0024360:+19476 | None:intergenic |
| AAAGACTTGGTGTTAATGTT+TGG | 0.390736 | tig0024360:-19086 | Msa1416530:CDS |
| AGTATCAAAGTCTGTTGAAA+TGG | 0.394374 | tig0024360:-19340 | Msa1416530:CDS |
| AACGATCGTGCCACCGGACT+TGG | 0.396780 | tig0024360:-15023 | Msa1416530:CDS |
| CCAAGTCTTTCAGAAAGCTT+TGG | 0.402419 | tig0024360:+19099 | None:intergenic |
| GGCACAAAGATTGCATGAAC+TGG | 0.405936 | tig0024360:+17773 | None:intergenic |
| TGCAATTTGTGCATCGATAA+AGG | 0.407203 | tig0024360:-17396 | Msa1416530:intron |
| TCCCGATGTCATTATGGGTC+AGG | 0.412631 | tig0024360:-17834 | Msa1416530:CDS |
| AGAACCTCATTCTGAATATC+AGG | 0.417812 | tig0024360:+15323 | None:intergenic |
| TTGATGTCAGGAGTGGTAAC+TGG | 0.423089 | tig0024360:+18272 | None:intergenic |
| GCGGCGGTGGTTGTTATGAA+TGG | 0.423932 | tig0024360:+19366 | None:intergenic |
| CCTGGTCCAAAACCACTCTT+TGG | 0.424183 | tig0024360:+17519 | None:intergenic |
| CAAATTTCTGATGGTCGTAA+TGG | 0.424706 | tig0024360:-13214 | Msa1416530:three_prime_UTR |
| GGCGGCTCCTCCGAGGTTGA+AGG | 0.426236 | tig0024360:-19289 | Msa1416530:CDS |
| ATATGCTTGTGCTTCATCAT+AGG | 0.431422 | tig0024360:+17910 | None:intergenic |
| ACATGAATTTCGATAAACTT+AGG | 0.431536 | tig0024360:-16230 | Msa1416530:CDS |
| GGCGTTGCAATTCAATCTCT+TGG | 0.433590 | tig0024360:+18307 | None:intergenic |
| AACTGTCATGCCGAGGAGCC+TGG | 0.438359 | tig0024360:-16157 | Msa1416530:CDS |
| GCATTAAAAGCTTGAAGAAA+AGG | 0.446362 | tig0024360:+14973 | None:intergenic |
| AATTCCTCCATCTCGCTGCT+TGG | 0.448041 | tig0024360:+15047 | None:intergenic |
| TGCTTCGGACAGGGTGAAGC+TGG | 0.448565 | tig0024360:-15098 | Msa1416530:intron |
| CTTTGATACTGCGGCGGCGG+TGG | 0.450776 | tig0024360:+19353 | None:intergenic |
| TGTTCCAATTATTGAGTCTC+CGG | 0.452886 | tig0024360:-19313 | Msa1416530:CDS |
| TTTGTGCCTGTGGGAGGTGG+TGG | 0.459179 | tig0024360:-17758 | Msa1416530:CDS |
| GCTGGAGCAAATGTATTAGT+TGG | 0.462032 | tig0024360:-15080 | Msa1416530:CDS |
| CTTGTTAATATTCATAATTG+AGG | 0.465771 | tig0024360:-13083 | Msa1416530:three_prime_UTR |
| TGCTAAGAAGCGTGCTATAG+AGG | 0.467092 | tig0024360:-17888 | Msa1416530:CDS |
| GCATTCTGTGACGGTGGTTA+CGG | 0.467805 | tig0024360:+19424 | None:intergenic |
| AAAAGAAATGCAGGAGAGAA+TGG | 0.468861 | tig0024360:-15716 | Msa1416530:CDS |
| ATCTTTGTGCCTGTGGGAGG+TGG | 0.470012 | tig0024360:-17761 | Msa1416530:CDS |
| TTGTTAATATTCATAATTGA+GGG | 0.471035 | tig0024360:-13082 | Msa1416530:three_prime_UTR |
| GGTAACTGGCATTGCAATAA+CGG | 0.476308 | tig0024360:+18286 | None:intergenic |
| TAAATGAATACCTTGATGTC+AGG | 0.478406 | tig0024360:+18260 | None:intergenic |
| TCATAGGTTCTCTCAATTGG+AGG | 0.482490 | tig0024360:-13336 | Msa1416530:intron |
| CTCATTCTGAATATCAGGTC+GGG | 0.484844 | tig0024360:+15328 | None:intergenic |
| AAGAACAACAGCTTTCTCCT+TGG | 0.486008 | tig0024360:+15984 | None:intergenic |
| ATCGAAATTCATGTTTGCTC+CGG | 0.486984 | tig0024360:+16239 | None:intergenic |
| CCCTGACCCATAATGACATC+GGG | 0.487914 | tig0024360:+17833 | None:intergenic |
| CGGAGGAGGAGGTGAGGTTG+TGG | 0.491684 | tig0024360:+19444 | None:intergenic |
| CAATCTCTCAGACGTTGACT+TGG | 0.492337 | tig0024360:-15671 | Msa1416530:CDS |
| CCAAAGCTTTCTGAAAGACT+TGG | 0.492496 | tig0024360:-19099 | Msa1416530:CDS |
| ATGACATCGGGATGATCAAA+AGG | 0.497200 | tig0024360:+17845 | None:intergenic |
| GGTGGATACTGAAGTGAATC+CGG | 0.500821 | tig0024360:+19261 | None:intergenic |
| AGCCAATGCATTTGCATCAG+TGG | 0.500969 | tig0024360:+17559 | None:intergenic |
| AATTATTGAGTCTCCGGCGG+CGG | 0.501742 | tig0024360:-19307 | Msa1416530:CDS |
| CTACTTGACCAAATTTCTGA+TGG | 0.503098 | tig0024360:-13223 | Msa1416530:three_prime_UTR |
| TTTATTCCATTACCGTGCAC+AGG | 0.503763 | tig0024360:-15222 | Msa1416530:intron |
| CTTGTTGCAGGACATGTTTG+AGG | 0.504713 | tig0024360:-16367 | Msa1416530:intron |
| GCAAGAGCAAGAGCGCCTGC+TGG | 0.505562 | tig0024360:+16324 | None:intergenic |
| GCCAATGCATTTGCATCAGT+GGG | 0.508903 | tig0024360:+17560 | None:intergenic |
| TCACCACCACGTGTCCTGTC+AGG | 0.510048 | tig0024360:+19219 | None:intergenic |
| GATATTCCATCGTGGACTAA+AGG | 0.510605 | tig0024360:+15247 | None:intergenic |
| AACCTCGGAGGAGCCGCCGC+CGG | 0.515606 | tig0024360:+19294 | None:intergenic |
| TCCGGCGAAACCTTCAACCT+CGG | 0.516696 | tig0024360:+19279 | None:intergenic |
| TTTCCGCTTGTGCAAGGAGT+TGG | 0.517649 | tig0024360:-17447 | Msa1416530:CDS |
| CAAAACTGTTTGAAACTGCC+AGG | 0.518258 | tig0024360:+16139 | None:intergenic |
| ATGGTTTGAAACGAGGGTTA+GGG | 0.519460 | tig0024360:+19385 | None:intergenic |
| TTGGCTTTGTCACTTCATCA+TGG | 0.519786 | tig0024360:-17542 | Msa1416530:CDS |
| TCATGCAATCTTTGTGCCTG+TGG | 0.520262 | tig0024360:-17768 | Msa1416530:CDS |
| CTGCAAGTATTATGGACTCA+AGG | 0.522899 | tig0024360:-16286 | Msa1416530:CDS |
| GGTGGTGATGAAGGTGATTG+TGG | 0.525787 | tig0024360:-19204 | Msa1416530:CDS |
| CCGTGGAGCTTATAATATGA+TGG | 0.527606 | tig0024360:-18411 | Msa1416530:CDS |
| ACGTTGGAGCGGTTCCTGAC+AGG | 0.531537 | tig0024360:-19233 | Msa1416530:CDS |
| GTGGAAATCTGTGGAGAGGT+GGG | 0.532704 | tig0024360:-17960 | Msa1416530:CDS |
| GAAATTCATGTTTGCTCCGG+AGG | 0.534000 | tig0024360:+16242 | None:intergenic |
| ATTATGGGTCAGGGAACTGT+CGG | 0.534240 | tig0024360:-17824 | Msa1416530:CDS |
| GGGGTTATATGCTCTTCAGC+TGG | 0.534738 | tig0024360:-18359 | Msa1416530:CDS |
| TGTGACGGTGGTTACGGAGG+AGG | 0.536430 | tig0024360:+19430 | None:intergenic |
| CTTAGAACTAAAAGAAATGC+AGG | 0.539142 | tig0024360:-15725 | Msa1416530:CDS |
| TTATGAATGGTTTGAAACGA+GGG | 0.543995 | tig0024360:+19379 | None:intergenic |
| TCCGAGGTTGAAGGTTTCGC+CGG | 0.547453 | tig0024360:-19280 | Msa1416530:CDS |
| TGATAATCGTAGCGCCTCCA+TGG | 0.548967 | tig0024360:+19470 | None:intergenic |
| CCCGATGTCATTATGGGTCA+GGG | 0.549015 | tig0024360:-17833 | Msa1416530:CDS |
| CTACCAACTCCTTGCACAAG+CGG | 0.552453 | tig0024360:+17444 | None:intergenic |
| TTGTGCAAGGAGTTGGTAGA+TGG | 0.553314 | tig0024360:-17440 | Msa1416530:CDS |
| TTATGGGTCAGGGAACTGTC+GGG | 0.553513 | tig0024360:-17823 | Msa1416530:CDS |
| AGTTACCACTCCTGACATCA+AGG | 0.554442 | tig0024360:-18270 | Msa1416530:intron |
| TGCAAGTATTATGGACTCAA+GGG | 0.554844 | tig0024360:-16285 | Msa1416530:CDS |
| TCAGGTTCCAAGCAGCGAGA+TGG | 0.557536 | tig0024360:-15054 | Msa1416530:CDS |
| ATTCAATCTCTTGGCAGACA+TGG | 0.558202 | tig0024360:+18316 | None:intergenic |
| GACGGTGGTTACGGAGGAGG+AGG | 0.559083 | tig0024360:+19433 | None:intergenic |
| CATGCAATCTTTGTGCCTGT+GGG | 0.560166 | tig0024360:-17767 | Msa1416530:CDS |
| ATTATAGTCATACCCAAGTC+CGG | 0.560339 | tig0024360:+15010 | None:intergenic |
| ACGATCGTGCCACCGGACTT+GGG | 0.560800 | tig0024360:-15022 | Msa1416530:CDS |
| GGAAACTTTCCGCTTGTGCA+AGG | 0.561388 | tig0024360:-17453 | Msa1416530:CDS |
| CTGGAAGAAGATTGTTCAAG+TGG | 0.562340 | tig0024360:+13058 | None:intergenic |
| GAATTCAACGATCGTGCCAC+CGG | 0.562341 | tig0024360:-15029 | Msa1416530:CDS |
| AGTGGAAATCTGTGGAGAGG+TGG | 0.565711 | tig0024360:-17961 | Msa1416530:CDS |
| GGAGAGGTGGGGTGCTACTG+TGG | 0.565931 | tig0024360:-17948 | Msa1416530:CDS |
| AGACTTTGATACTGCGGCGG+CGG | 0.567795 | tig0024360:+19350 | None:intergenic |
| CAGGTTGGAGGATTTGCAGA+TGG | 0.569395 | tig0024360:-17500 | Msa1416530:CDS |
| TTTGAAACTGCCAGGCTCCT+CGG | 0.576186 | tig0024360:+16147 | None:intergenic |
| CTCCGGCGGCGGCTCCTCCG+AGG | 0.577523 | tig0024360:-19296 | Msa1416530:CDS |
| CCGACCTGATATTCAGAATG+AGG | 0.577734 | tig0024360:-15327 | Msa1416530:CDS |
| AGCACCAGGTCTTTCTGGAA+AGG | 0.579418 | tig0024360:+15289 | None:intergenic |
| GGGTCAGGGAACTGTCGGGA+TGG | 0.580900 | tig0024360:-17819 | Msa1416530:CDS |
| GGAACCGCTCCAACGTAACC+AGG | 0.581487 | tig0024360:+19240 | None:intergenic |
| AGGACACGTGGTGGTGATGA+AGG | 0.582103 | tig0024360:-19213 | Msa1416530:CDS |
| TCAGCTGGAAATCATGCTCA+AGG | 0.584823 | tig0024360:-18344 | Msa1416530:CDS |
| TGTGGTGCATTCTGTGACGG+TGG | 0.586258 | tig0024360:+19418 | None:intergenic |
| AGGAGCATATTGGAACCAGC+AGG | 0.586301 | tig0024360:-16339 | Msa1416530:CDS |
| AGCTTTGGCGCCAATTCAAG+AGG | 0.586347 | tig0024360:+19114 | None:intergenic |
| ACCTTTGCAGTGGAAATCTG+TGG | 0.590239 | tig0024360:-17969 | Msa1416530:intron |
| TATGATGGCTAAACTTCCAA+AGG | 0.590661 | tig0024360:-18396 | Msa1416530:CDS |
| GTTATGAATGGTTTGAAACG+AGG | 0.592217 | tig0024360:+19378 | None:intergenic |
| CAGTATCCACCTGGTTACGT+TGG | 0.593210 | tig0024360:-19249 | Msa1416530:CDS |
| TTCTGTGACGGTGGTTACGG+AGG | 0.596110 | tig0024360:+19427 | None:intergenic |
| GCAATCTTTGTGCCTGTGGG+AGG | 0.596806 | tig0024360:-17764 | Msa1416530:CDS |
| TTCAACAGACTTTGATACTG+CGG | 0.597441 | tig0024360:+19344 | None:intergenic |
| ACCCACTGATGCAAATGCAT+TGG | 0.597685 | tig0024360:-17561 | Msa1416530:CDS |
| GGTTCCAAGCAGCGAGATGG+AGG | 0.598270 | tig0024360:-15051 | Msa1416530:CDS |
| TGCTGTTAACTGTCATGCCG+AGG | 0.599974 | tig0024360:-16164 | Msa1416530:CDS |
| AATGTTATAGCAATAACCTC+CGG | 0.600808 | tig0024360:-16258 | Msa1416530:CDS |
| TGGAGGATTTGCAGATGGTG+TGG | 0.601430 | tig0024360:-17495 | Msa1416530:CDS |
| ATTTATCCTCTTCACGTAAG+CGG | 0.602234 | tig0024360:+17718 | None:intergenic |
| GATTGTGGAGTAAGTGCTAT+GGG | 0.606504 | tig0024360:-19189 | Msa1416530:CDS |
| ACTTCATCATGGCCAAAGAG+TGG | 0.606993 | tig0024360:-17531 | Msa1416530:CDS |
| TCCCTGACCCATAATGACAT+CGG | 0.610285 | tig0024360:+17832 | None:intergenic |
| CCTCATTCTGAATATCAGGT+CGG | 0.611117 | tig0024360:+15327 | None:intergenic |
| TGATTGTGGAGTAAGTGCTA+TGG | 0.611156 | tig0024360:-19190 | Msa1416530:CDS |
| CAAATACAGATATAGTTCCA+AGG | 0.611281 | tig0024360:-16001 | Msa1416530:CDS |
| TCCACCTGGTTACGTTGGAG+CGG | 0.612380 | tig0024360:-19244 | Msa1416530:CDS |
| GTAACTGAACTTGCTAATGT+CGG | 0.613762 | tig0024360:-16204 | Msa1416530:CDS |
| GTATTGCCGCTTACGTGAAG+AGG | 0.614397 | tig0024360:-17724 | Msa1416530:CDS |
| AATCAAAATGACCCAAACCA+TGG | 0.614626 | tig0024360:-19487 | Msa1416530:exon |
| CCATCATATTATAAGCTCCA+CGG | 0.615666 | tig0024360:+18411 | None:intergenic |
| CATCTGCAAATCCTCCAACC+TGG | 0.616040 | tig0024360:+17501 | None:intergenic |
| GAAAGATCATTTGCGTCACA+TGG | 0.617461 | tig0024360:-15647 | Msa1416530:intron |
| TGCAAATTCTAACCTGTGCA+CGG | 0.621586 | tig0024360:+15210 | None:intergenic |
| TCGATGCACAAATTGCATCA+CGG | 0.623238 | tig0024360:+17402 | None:intergenic |
| TTTACCTTTCCAGAAAGACC+TGG | 0.624311 | tig0024360:-15293 | Msa1416530:CDS |
| TCCAATTATTGAGTCTCCGG+CGG | 0.624802 | tig0024360:-19310 | Msa1416530:CDS |
| ATGAGACCACCACCTCCCAC+AGG | 0.625201 | tig0024360:+17752 | None:intergenic |
| TGGTTACGGAGGAGGAGGTG+AGG | 0.625554 | tig0024360:+19438 | None:intergenic |
| GATTCACTTCAGTATCCACC+TGG | 0.627666 | tig0024360:-19258 | Msa1416530:CDS |
| AGATGGTGTGGCTGTAAAAG+AGG | 0.629062 | tig0024360:-17483 | Msa1416530:CDS |
| TAGACTCCTTTAGTCCACGA+TGG | 0.634604 | tig0024360:-15253 | Msa1416530:CDS |
| GGCTGTAAAAGAGGTTGGCG+AGG | 0.636934 | tig0024360:-17474 | Msa1416530:CDS |
| GGTGTGGCTGTAAAAGAGGT+TGG | 0.638381 | tig0024360:-17479 | Msa1416530:CDS |
| TGGAAATCTGTGGAGAGGTG+GGG | 0.641456 | tig0024360:-17959 | Msa1416530:CDS |
| GCAAGTATTATGGACTCAAG+GGG | 0.645018 | tig0024360:-16284 | Msa1416530:CDS |
| GAATACCTTGATGTCAGGAG+TGG | 0.645242 | tig0024360:+18265 | None:intergenic |
| AAGAAGCGTGCTATAGAGGA+CGG | 0.645449 | tig0024360:-17884 | Msa1416530:CDS |
| GCGGTTCCTGACAGGACACG+TGG | 0.649476 | tig0024360:-19225 | Msa1416530:CDS |
| CGTGAAGAGGATAAATCCAG+AGG | 0.652583 | tig0024360:-17711 | Msa1416530:intron |
| ACAGGTGAAGATAATTGGGG+TGG | 0.664304 | tig0024360:-17585 | Msa1416530:intron |
| TAGTGTGGTGCATTCTGTGA+CGG | 0.664443 | tig0024360:+19415 | None:intergenic |
| AACAGACTTTGATACTGCGG+CGG | 0.668352 | tig0024360:+19347 | None:intergenic |
| TGCAGTGGAAATCTGTGGAG+AGG | 0.669367 | tig0024360:-17964 | Msa1416530:intron |
| ACATCGGGATGATCAAAAGG+AGG | 0.679406 | tig0024360:+17848 | None:intergenic |
| GGCGAAACCTTCAACCTCGG+AGG | 0.692911 | tig0024360:+19282 | None:intergenic |
| ACCGCTCCAACGTAACCAGG+TGG | 0.696827 | tig0024360:+19243 | None:intergenic |
| TTCACAGGTGAAGATAATTG+GGG | 0.702347 | tig0024360:-17588 | Msa1416530:intron |
| CAAAATGACCCAAACCATGG+AGG | 0.704518 | tig0024360:-19484 | Msa1416530:exon |
| ATAGTCATACCCAAGTCCGG+TGG | 0.715971 | tig0024360:+15013 | None:intergenic |
| GGTTAGGGTGAAGAGTAGTG+TGG | 0.726653 | tig0024360:+19400 | None:intergenic |
| GTTCCTGACAGGACACGTGG+TGG | 0.729331 | tig0024360:-19222 | Msa1416530:CDS |
| CAAGTATTATGGACTCAAGG+GGG | 0.741660 | tig0024360:-16283 | Msa1416530:CDS |
| AATAAAGAGATATTCCATCG+TGG | 0.751711 | tig0024360:+15239 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATTTATAAATAAAAAAT+TGG | + | tig0024360:18478-18497 | None:intergenic | 0.0% |
| !!! | AATTTTTTATTTATAAATTA+TGG | - | tig0024360:18477-18496 | Msa1416530:intron | 0.0% |
| !!! | ATTTTTTATTTATAAATTAT+GGG | - | tig0024360:18478-18497 | Msa1416530:intron | 0.0% |
| !! | AGATAAAAAAAAAAAAAATC+TGG | + | tig0024360:15775-15794 | None:intergenic | 10.0% |
| !!! | AGATTTTTTTTTTTTTTATC+TGG | - | tig0024360:15774-15793 | Msa1416530:intron | 10.0% |
| !! | TTATAAAAATTCAAAATGAA+GGG | + | tig0024360:16985-17004 | None:intergenic | 10.0% |
| !! | TTTATAAAAATTCAAAATGA+AGG | + | tig0024360:16986-17005 | None:intergenic | 10.0% |
| !! | GTAAAACATAATATATAAAT+GGG | + | tig0024360:17691-17710 | None:intergenic | 10.0% |
| !! | AGTAAAACATAATATATAAA+TGG | + | tig0024360:17692-17711 | None:intergenic | 10.0% |
| !!! | ATTTATATATTATGTTTTAC+TGG | - | tig0024360:17691-17710 | Msa1416530:intron | 10.0% |
| !!! | TATGTTTAAAATTTTGAATT+TGG | - | tig0024360:17740-17759 | Msa1416530:CDS | 10.0% |
| !!! | TTTGAAATTTTCTTTAATTA+TGG | - | tig0024360:17818-17837 | Msa1416530:CDS | 10.0% |
| !! | ACAAAAAAATAAATTGAATT+TGG | - | tig0024360:17919-17938 | Msa1416530:CDS | 10.0% |
| !!! | TTTTGTATTTGTTTTAAAAA+TGG | + | tig0024360:18685-18704 | None:intergenic | 10.0% |
| !!! | AAACTTTTGAATTTTAAATT+TGG | - | tig0024360:18808-18827 | Msa1416530:intron | 10.0% |
| !! | ACTAAATTAATATTATAAGA+TGG | + | tig0024360:19003-19022 | None:intergenic | 10.0% |
| !!! | GTTAATTTTTTGTTTTGTTT+TGG | - | tig0024360:13634-13653 | Msa1416530:intron | 15.0% |
| !!! | TGAGTTTTCAAAAAAAAAAA+AGG | - | tig0024360:15956-15975 | Msa1416530:intron | 15.0% |
| !!! | ATCAAAAATTGATAATAAAC+AGG | + | tig0024360:16670-16689 | None:intergenic | 15.0% |
| !!! | TATTTTATTATTCATTGTGT+TGG | - | tig0024360:16814-16833 | Msa1416530:intron | 15.0% |
| !!! | GTTATTATGTTTTATACTAT+CGG | - | tig0024360:17716-17735 | Msa1416530:CDS | 15.0% |
| !! | ATAAAAATGTCTGATTAAAA+TGG | - | tig0024360:17790-17809 | Msa1416530:CDS | 15.0% |
| !! | TAAAAATGTCTGATTAAAAT+GGG | - | tig0024360:17791-17810 | Msa1416530:CDS | 15.0% |
| !!! | AAATTGAATTTGGATTTTTT+TGG | - | tig0024360:17929-17948 | Msa1416530:CDS | 15.0% |
| !!! | TTTTCGATATAAGAAATATT+TGG | + | tig0024360:18389-18408 | None:intergenic | 15.0% |
| !!! | AAATTTTTCTAAAAAACATC+TGG | + | tig0024360:18550-18569 | None:intergenic | 15.0% |
| !!! | TTTTTAAATTCCAAAACAAA+TGG | - | tig0024360:18643-18662 | Msa1416530:intron | 15.0% |
| !! | ATAATAAAACATTCATTGTT+TGG | + | tig0024360:19136-19155 | None:intergenic | 15.0% |
| !! | TTGTTAATATTCATAATTGA+GGG | - | tig0024360:19505-19524 | Msa1416530:five_prime_UTR | 15.0% |
| !!! | TTATCATATTTTAATTCAAC+TGG | + | tig0024360:19551-19570 | None:intergenic | 15.0% |
| !! | AATTCATAAGTTCTTACTAA+CGG | - | tig0024360:13786-13805 | Msa1416530:intron | 20.0% |
| !! | TATTATTCATAAACTTGTCA+AGG | + | tig0024360:13848-13867 | None:intergenic | 20.0% |
| !! | AATTCAAAAATTGTGTGTAT+TGG | + | tig0024360:13923-13942 | None:intergenic | 20.0% |
| !!! | CACACAATTTTTGAATTTTT+TGG | - | tig0024360:13926-13945 | Msa1416530:intron | 20.0% |
| !!! | ATATGTTGTTTATGAAATTG+TGG | - | tig0024360:14092-14111 | Msa1416530:intron | 20.0% |
| !! | ATTACACAACAAAAAAAGTT+CGG | + | tig0024360:15596-15615 | None:intergenic | 20.0% |
| !! | AGAATTATTTAATGCTTCAT+TGG | - | tig0024360:15619-15638 | Msa1416530:intron | 20.0% |
| !!! | TTCATTGGTTTATATATACT+TGG | - | tig0024360:15634-15653 | Msa1416530:intron | 20.0% |
| !!! | AAAAAAAAATCTGGAGTTAA+CGG | + | tig0024360:15766-15785 | None:intergenic | 20.0% |
| !! | TGGTACAATTATATGAATTT+GGG | - | tig0024360:15986-16005 | Msa1416530:CDS | 20.0% |
| !!! | ATTTTACTCTGTACTTTTAA+AGG | - | tig0024360:16014-16033 | Msa1416530:CDS | 20.0% |
| !! | TTTGTACATTAAATGGAAAT+TGG | - | tig0024360:16158-16177 | Msa1416530:CDS | 20.0% |
| !!! | TAATAAAATATTATTGGCCT+TGG | + | tig0024360:16804-16823 | None:intergenic | 20.0% |
| !! | ATTTAGTACTTAACTTTGTT+TGG | + | tig0024360:17038-17057 | None:intergenic | 20.0% |
| !! | TTTCAAAACAAAGTTAAACT+TGG | + | tig0024360:17221-17240 | None:intergenic | 20.0% |
| !!! | TTTTGAAAACATTTTTCAGA+TGG | - | tig0024360:17233-17252 | Msa1416530:intron | 20.0% |
| !!! | TTTGAAAACATTTTTCAGAT+GGG | - | tig0024360:17234-17253 | Msa1416530:intron | 20.0% |
| !!! | AATACTGCATGTTTTTTTTT+TGG | - | tig0024360:17423-17442 | Msa1416530:CDS | 20.0% |
| !!! | ATGCATTGATTGATTATTTT+AGG | - | tig0024360:17633-17652 | Msa1416530:intron | 20.0% |
| !!! | TAGAGTTATGTTTATTTTAG+AGG | - | tig0024360:17978-17997 | Msa1416530:intron | 20.0% |
| !! | TATTACATAACTTCAAAGAT+TGG | - | tig0024360:18011-18030 | Msa1416530:intron | 20.0% |
| !! | ATTACATAACTTCAAAGATT+GGG | - | tig0024360:18012-18031 | Msa1416530:intron | 20.0% |
| !! | CAAATTAGGTAAATAAAAAG+TGG | - | tig0024360:18239-18258 | Msa1416530:intron | 20.0% |
| !! | TCTTCAAAAGCTAATTAAAA+TGG | + | tig0024360:18419-18438 | None:intergenic | 20.0% |
| !! | AAAAATGGTTATCTAACATA+GGG | + | tig0024360:18670-18689 | None:intergenic | 20.0% |
| !! | TAAAAATGGTTATCTAACAT+AGG | + | tig0024360:18671-18690 | None:intergenic | 20.0% |
| !!! | TTGTTAGGTTTTTGTTAAAA+TGG | + | tig0024360:19095-19114 | None:intergenic | 20.0% |
| !!! | TTTGGTTTTTGGTTTTTTAA+GGG | + | tig0024360:19118-19137 | None:intergenic | 20.0% |
| !! | CTTGTTAATATTCATAATTG+AGG | - | tig0024360:19504-19523 | Msa1416530:five_prime_UTR | 20.0% |
| ! | CAAAAATAAGTCAATCCAAA+CGG | + | tig0024360:13722-13741 | None:intergenic | 25.0% |
| !!! | ATTTTTGAATTTTTTGGCAC+TGG | - | tig0024360:13932-13951 | Msa1416530:intron | 25.0% |
| !! | GAAATTGTGAATTTTGTGAT+AGG | - | tig0024360:14137-14156 | Msa1416530:intron | 25.0% |
| !!! | GTAACAAACAAAGTATTTTC+TGG | + | tig0024360:14537-14556 | None:intergenic | 25.0% |
| ! | TCTTGTTGAAGAAATTAATG+TGG | - | tig0024360:14565-14584 | Msa1416530:intron | 25.0% |
| ! | TCTGCAAACAATAACAAATT+TGG | - | tig0024360:15512-15531 | Msa1416530:intron | 25.0% |
| !! | ACAAATTTGGAATTGATTGA+TGG | - | tig0024360:15525-15544 | Msa1416530:intron | 25.0% |
| !!! | TTTTTTACCTCTCTGTATTA+TGG | - | tig0024360:15669-15688 | Msa1416530:CDS | 25.0% |
| !! | AAAAAAAATCTGGAGTTAAC+GGG | + | tig0024360:15765-15784 | None:intergenic | 25.0% |
| ! | AAAAAAAAAAAGGATGCATG+TGG | - | tig0024360:15966-15985 | Msa1416530:intron | 25.0% |
| ! | GTGGTACAATTATATGAATT+TGG | - | tig0024360:15985-16004 | Msa1416530:CDS | 25.0% |
| ! | AAAATAATTCCCAATTCTCA+CGG | + | tig0024360:16118-16137 | None:intergenic | 25.0% |
| ! | TTAATGTACAAAACATTCGA+AGG | + | tig0024360:16150-16169 | None:intergenic | 25.0% |
| !! | CGAATGTTTTGTACATTAAA+TGG | - | tig0024360:16151-16170 | Msa1416530:CDS | 25.0% |
| ! | ACATGAATTTCGATAAACTT+AGG | - | tig0024360:16357-16376 | Msa1416530:CDS | 25.0% |
| !!! | TTTCAAACAGTTTTGTGAAT+TGG | - | tig0024360:16456-16475 | Msa1416530:intron | 25.0% |
| !!! | ACTGTTATTTTTTCCAAAAC+AGG | - | tig0024360:16498-16517 | Msa1416530:intron | 25.0% |
| !!! | CTGTTATTTTTTCCAAAACA+GGG | - | tig0024360:16499-16518 | Msa1416530:intron | 25.0% |
| !!! | TGCATTTCTTTTAGTTCTAA+GGG | + | tig0024360:16863-16882 | None:intergenic | 25.0% |
| ! | ACAAGACCATTAAATCAAAT+GGG | + | tig0024360:17134-17153 | None:intergenic | 25.0% |
| ! | ACGTGTTTAGTAAACATTAT+CGG | + | tig0024360:17168-17187 | None:intergenic | 25.0% |
| ! | AAATGTATTAGTTGGAATTC+AGG | - | tig0024360:17515-17534 | Msa1416530:CDS | 25.0% |
| ! | CACTTGTCATAAAAAATTAC+TGG | - | tig0024360:17656-17675 | Msa1416530:intron | 25.0% |
| ! | TTGTCATAAAAAATTACTGG+CGG | - | tig0024360:17659-17678 | Msa1416530:intron | 25.0% |
| ! | AATTTGGAAAATTGTGTTGA+GGG | - | tig0024360:17756-17775 | Msa1416530:CDS | 25.0% |
| !!! | TTGGATTTTTTTGGTTGTTT+AGG | - | tig0024360:17938-17957 | Msa1416530:CDS | 25.0% |
| !!! | TGGATTTTTTTGGTTGTTTA+GGG | - | tig0024360:17939-17958 | Msa1416530:CDS | 25.0% |
| ! | CTTGGAGAAAAAATTTATGA+TGG | + | tig0024360:18594-18613 | None:intergenic | 25.0% |
| ! | CGAGTAATAAAGAAATTTGA+AGG | - | tig0024360:19058-19077 | Msa1416530:intron | 25.0% |
| !!! | GTTTGGTTTTTGGTTTTTTA+AGG | + | tig0024360:19119-19138 | None:intergenic | 25.0% |
| !!! | AACATTCATTGTTTGGTTTT+TGG | + | tig0024360:19129-19148 | None:intergenic | 25.0% |
| ! | TAAATGGAAATTAGATCGAA+TGG | + | tig0024360:19166-19185 | None:intergenic | 25.0% |
| !! | TTTAGAATGGATGGTATAAA+TGG | + | tig0024360:19182-19201 | None:intergenic | 25.0% |
| !!! | AACTTGTGAGTATTTTAGAA+TGG | + | tig0024360:19195-19214 | None:intergenic | 25.0% |
| ! | ACATTGTTGGACAATAAATA+TGG | - | tig0024360:19288-19307 | Msa1416530:CDS | 25.0% |
| ! | TTATGAATGGTTTGAAACGA+GGG | + | tig0024360:13211-13230 | None:intergenic | 30.0% |
| AGTATCAAAGTCTGTTGAAA+TGG | - | tig0024360:13247-13266 | Msa1416530:three_prime_UTR | 30.0% | |
| GACTAGTATACTTACTTCTA+AGG | - | tig0024360:13427-13446 | Msa1416530:intron | 30.0% | |
| !! | AAAGACTTGGTGTTAATGTT+TGG | - | tig0024360:13501-13520 | Msa1416530:intron | 30.0% |
| ! | TATGTTCTTGTTCTTGTTGT+TGG | - | tig0024360:13577-13596 | Msa1416530:intron | 30.0% |
| ATTCAATATGTCTCTCATGT+CGG | - | tig0024360:13665-13684 | Msa1416530:intron | 30.0% | |
| !! | GTATTTTCATTTAAGATCCG+TGG | - | tig0024360:14159-14178 | Msa1416530:intron | 30.0% |
| ! | TAAACTTCCAAAGGATGTTT+TGG | - | tig0024360:14200-14219 | Msa1416530:intron | 30.0% |
| TAAATGAATACCTTGATGTC+AGG | + | tig0024360:14330-14349 | None:intergenic | 30.0% | |
| !!! | TTTGTTTTTTACCTTTGCAG+TGG | - | tig0024360:14608-14627 | Msa1416530:intron | 30.0% |
| ! | TTGACATTTTGAATGTTCAC+AGG | - | tig0024360:14984-15003 | Msa1416530:CDS | 30.0% |
| CTAAATGCAAACTTTCACAA+GGG | + | tig0024360:15230-15249 | None:intergenic | 30.0% | |
| TCTAAATGCAAACTTTCACA+AGG | + | tig0024360:15231-15250 | None:intergenic | 30.0% | |
| ! | AAGTTTGCATTTAGAATCTC+TGG | - | tig0024360:15236-15255 | Msa1416530:CDS | 30.0% |
| !!! | TATACTCATTGTTTTGATGC+TGG | - | tig0024360:15378-15397 | Msa1416530:intron | 30.0% |
| AAACTGTCAAGAAAGATAGA+TGG | + | tig0024360:15419-15438 | None:intergenic | 30.0% | |
| TAAGTGCAGAGTAATCAAAT+TGG | - | tig0024360:15456-15475 | Msa1416530:intron | 30.0% | |
| ! | AATTTGGAATTGATTGATGG+AGG | - | tig0024360:15528-15547 | Msa1416530:intron | 30.0% |
| CAACAAAAAAAGTTCGGATT+TGG | + | tig0024360:15590-15609 | None:intergenic | 30.0% | |
| GGGTTAAATAGCAATGTAAT+TGG | + | tig0024360:15745-15764 | None:intergenic | 30.0% | |
| ATCATCCTGTTGTGATTTAA+TGG | + | tig0024360:15802-15821 | None:intergenic | 30.0% | |
| AATCACAACAGGATGATTAT+AGG | - | tig0024360:15805-15824 | Msa1416530:intron | 30.0% | |
| AATGTTATAGCAATAACCTC+CGG | - | tig0024360:16329-16348 | Msa1416530:CDS | 30.0% | |
| ! | AACTATGAAAAACCCTGTTT+TGG | + | tig0024360:16514-16533 | None:intergenic | 30.0% |
| CAAATACAGATATAGTTCCA+AGG | - | tig0024360:16586-16605 | Msa1416530:intron | 30.0% | |
| GATAATAAACAGGAAAGACA+CGG | + | tig0024360:16660-16679 | None:intergenic | 30.0% | |
| !!! | CTGCATTTCTTTTAGTTCTA+AGG | + | tig0024360:16864-16883 | None:intergenic | 30.0% |
| CTTAGAACTAAAAGAAATGC+AGG | - | tig0024360:16862-16881 | Msa1416530:intron | 30.0% | |
| ! | TAGTACTTAACTTTGTTTGG+CGG | + | tig0024360:17035-17054 | None:intergenic | 30.0% |
| ! | TATGGGCTTTATAAATAGCA+TGG | + | tig0024360:17068-17087 | None:intergenic | 30.0% |
| ATAAAGCCCATAATATGAGA+CGG | - | tig0024360:17076-17095 | Msa1416530:intron | 30.0% | |
| CAAGACCATTAAATCAAATG+GGG | + | tig0024360:17133-17152 | None:intergenic | 30.0% | |
| GACAAGACCATTAAATCAAA+TGG | + | tig0024360:17135-17154 | None:intergenic | 30.0% | |
| ACTTGGTCAAATACAAAAAC+AGG | + | tig0024360:17204-17223 | None:intergenic | 30.0% | |
| ! | AAAAATTTCATCAAAGCACC+AGG | + | tig0024360:17315-17334 | None:intergenic | 30.0% |
| AATAAAGAGATATTCCATCG+TGG | + | tig0024360:17351-17370 | None:intergenic | 30.0% | |
| GCATTAAAAGCTTGAAGAAA+AGG | + | tig0024360:17617-17636 | None:intergenic | 30.0% | |
| GAATTTGGAAAATTGTGTTG+AGG | - | tig0024360:17755-17774 | Msa1416530:CDS | 30.0% | |
| ! | AACTACCACATTTTATACGA+TGG | - | tig0024360:18091-18110 | Msa1416530:intron | 30.0% |
| TTGTTCCATCGTATAAAATG+TGG | + | tig0024360:18099-18118 | None:intergenic | 30.0% | |
| TGCAAAGTAATACGAGAATT+AGG | - | tig0024360:18287-18306 | Msa1416530:CDS | 30.0% | |
| GCAAAGTAATACGAGAATTA+GGG | - | tig0024360:18288-18307 | Msa1416530:CDS | 30.0% | |
| TCAACTTGAAGAATATGAGA+TGG | + | tig0024360:19034-19053 | None:intergenic | 30.0% | |
| !!! | TTGGTTTTTTAAGGGTTGTT+AGG | + | tig0024360:19110-19129 | None:intergenic | 30.0% |
| !!! | TGTGAGTATTTTAGAATGGA+TGG | + | tig0024360:19191-19210 | None:intergenic | 30.0% |
| ! | TTTTCATAGGTTCTCTCAAT+TGG | - | tig0024360:19248-19267 | Msa1416530:CDS | 30.0% |
| AATCAAAATGACCCAAACCA+TGG | - | tig0024360:13100-13119 | Msa1416530:three_prime_UTR | 35.0% | |
| ! | GTTATGAATGGTTTGAAACG+AGG | + | tig0024360:13212-13231 | None:intergenic | 35.0% |
| TTCAACAGACTTTGATACTG+CGG | + | tig0024360:13246-13265 | None:intergenic | 35.0% | |
| TGTTCCAATTATTGAGTCTC+CGG | - | tig0024360:13274-13293 | Msa1416530:three_prime_UTR | 35.0% | |
| TGTTGAATCTCCTCTTGAAT+TGG | - | tig0024360:13463-13482 | Msa1416530:intron | 35.0% | |
| !! | GAGTTGATGATAGTACTTAC+AGG | + | tig0024360:13548-13567 | None:intergenic | 35.0% |
| ACAAAGAATGCTGTAATTGC+AGG | - | tig0024360:13985-14004 | Msa1416530:intron | 35.0% | |
| CAAAGAATGCTGTAATTGCA+GGG | - | tig0024360:13986-14005 | Msa1416530:intron | 35.0% | |
| !! | TGTGTTGATCATTTTGCTTG+AGG | - | tig0024360:14069-14088 | Msa1416530:intron | 35.0% |
| CCATCATATTATAAGCTCCA+CGG | + | tig0024360:14179-14198 | None:intergenic | 35.0% | |
| TATGATGGCTAAACTTCCAA+AGG | - | tig0024360:14191-14210 | Msa1416530:intron | 35.0% | |
| !!! | CAAAGGATGTTTTGGAGAAA+GGG | - | tig0024360:14208-14227 | Msa1416530:intron | 35.0% |
| !!! | AAAGGATGTTTTGGAGAAAG+GGG | - | tig0024360:14209-14228 | Msa1416530:intron | 35.0% |
| ACTAAAACTCATCAAACACG+TGG | + | tig0024360:14383-14402 | None:intergenic | 35.0% | |
| GTTAATGATTGTCTCAGTCA+AGG | + | tig0024360:14441-14460 | None:intergenic | 35.0% | |
| CTTACCTCATGATCGAAATT+CGG | - | tig0024360:14470-14489 | Msa1416530:intron | 35.0% | |
| TCCGATTCTTAAGGAAAATG+GGG | + | tig0024360:14505-14524 | None:intergenic | 35.0% | |
| CTCCGATTCTTAAGGAAAAT+GGG | + | tig0024360:14506-14525 | None:intergenic | 35.0% | |
| TCTCCGATTCTTAAGGAAAA+TGG | + | tig0024360:14507-14526 | None:intergenic | 35.0% | |
| TTTCAACTCTCCGATTCTTA+AGG | + | tig0024360:14514-14533 | None:intergenic | 35.0% | |
| CATCATAGGAATCTCCAATA+AGG | + | tig0024360:14666-14685 | None:intergenic | 35.0% | |
| ATATGCTTGTGCTTCATCAT+AGG | + | tig0024360:14680-14699 | None:intergenic | 35.0% | |
| ATTTATCCTCTTCACGTAAG+CGG | + | tig0024360:14872-14891 | None:intergenic | 35.0% | |
| TGTTCACAGGTGAAGATAAT+TGG | - | tig0024360:14997-15016 | Msa1416530:CDS | 35.0% | |
| GTTCACAGGTGAAGATAATT+GGG | - | tig0024360:14998-15017 | Msa1416530:CDS | 35.0% | |
| TTCACAGGTGAAGATAATTG+GGG | - | tig0024360:14999-15018 | Msa1416530:CDS | 35.0% | |
| ! | TGCAATTTGTGCATCGATAA+AGG | - | tig0024360:15191-15210 | Msa1416530:intron | 35.0% |
| GAAGTAGTTGCCATAGATAA+TGG | + | tig0024360:15295-15314 | None:intergenic | 35.0% | |
| AATCTAGCCATAATACAGAG+AGG | + | tig0024360:15679-15698 | None:intergenic | 35.0% | |
| TATGGCTAGATTTAGTGAAG+CGG | - | tig0024360:15687-15706 | Msa1416530:CDS | 35.0% | |
| ACAAACAAAACAGCTCCATT+CGG | + | tig0024360:16093-16112 | None:intergenic | 35.0% | |
| TTGTTTGTATCCGTGAGAAT+TGG | - | tig0024360:16105-16124 | Msa1416530:intron | 35.0% | |
| TGTTTGTATCCGTGAGAATT+GGG | - | tig0024360:16106-16125 | Msa1416530:intron | 35.0% | |
| ! | GATTATCTAGGACTTGACAT+TGG | - | tig0024360:16192-16211 | Msa1416530:CDS | 35.0% |
| AGGACATGTTTGAGGAAAAA+AGG | - | tig0024360:16228-16247 | Msa1416530:CDS | 35.0% | |
| ! | TGAGGAAAAAAGGAGCATAT+TGG | - | tig0024360:16238-16257 | Msa1416530:CDS | 35.0% |
| GAAGCATACTGCAAGTATTA+TGG | - | tig0024360:16293-16312 | Msa1416530:CDS | 35.0% | |
| TGCAAGTATTATGGACTCAA+GGG | - | tig0024360:16302-16321 | Msa1416530:CDS | 35.0% | |
| ATCGAAATTCATGTTTGCTC+CGG | + | tig0024360:16351-16370 | None:intergenic | 35.0% | |
| !! | GTAACTGAACTTGCTAATGT+CGG | - | tig0024360:16383-16402 | Msa1416530:intron | 35.0% |
| AGAAAGCTGTTGTTCTTTAC+AGG | - | tig0024360:16609-16628 | Msa1416530:intron | 35.0% | |
| AAAAGAAATGCAGGAGAGAA+TGG | - | tig0024360:16871-16890 | Msa1416530:intron | 35.0% | |
| TACTCTCCGTCTCATATTAT+GGG | + | tig0024360:17085-17104 | None:intergenic | 35.0% | |
| TTACTCTCCGTCTCATATTA+TGG | + | tig0024360:17086-17105 | None:intergenic | 35.0% | |
| AGAACCTCATTCTGAATATC+AGG | + | tig0024360:17267-17286 | None:intergenic | 35.0% | |
| !! | AACATGCAGTATTTGACTTG+AGG | + | tig0024360:17416-17435 | None:intergenic | 35.0% |
| TACAAGCCATTAGATTGCAT+TGG | + | tig0024360:17464-17483 | None:intergenic | 35.0% | |
| ATTATAGTCATACCCAAGTC+CGG | + | tig0024360:17580-17599 | None:intergenic | 35.0% | |
| ACATAACTTCAAAGATTGGG+AGG | - | tig0024360:18015-18034 | Msa1416530:intron | 35.0% | |
| TCAAAATGTGACATTGTTGG+AGG | + | tig0024360:18064-18083 | None:intergenic | 35.0% | |
| CTGTCAAAATGTGACATTGT+TGG | + | tig0024360:18067-18086 | None:intergenic | 35.0% | |
| !! | CAACAATGTCACATTTTGAC+AGG | - | tig0024360:18065-18084 | Msa1416530:intron | 35.0% |
| TGTTCTATGAAATGCAAGTG+AGG | - | tig0024360:18210-18229 | Msa1416530:intron | 35.0% | |
| GTTCTATGAAATGCAAGTGA+GGG | - | tig0024360:18211-18230 | Msa1416530:intron | 35.0% | |
| ! | AACATAGGGTCCATTTGTTT+TGG | + | tig0024360:18656-18675 | None:intergenic | 35.0% |
| TCGATCATTCATCTAACAAG+AGG | - | tig0024360:18943-18962 | Msa1416530:intron | 35.0% | |
| CGATCATTCATCTAACAAGA+GGG | - | tig0024360:18944-18963 | Msa1416530:intron | 35.0% | |
| ! | ACTTTTGTACGAGACATTGT+TGG | - | tig0024360:19275-19294 | Msa1416530:CDS | 35.0% |
| CAGAAATTTGGTCAAGTAGA+AGG | + | tig0024360:19363-19382 | None:intergenic | 35.0% | |
| CTACTTGACCAAATTTCTGA+TGG | - | tig0024360:19364-19383 | Msa1416530:CDS | 35.0% | |
| CATTACGACCATCAGAAATT+TGG | + | tig0024360:19375-19394 | None:intergenic | 35.0% | |
| CAAATTTCTGATGGTCGTAA+TGG | - | tig0024360:19373-19392 | Msa1416530:CDS | 35.0% | |
| ! | CGTAATGGAAATCGAATATC+AGG | - | tig0024360:19388-19407 | Msa1416530:CDS | 35.0% |
| ! | ATGGTTTGAAACGAGGGTTA+GGG | + | tig0024360:13205-13224 | None:intergenic | 40.0% |
| ! | AATGGTTTGAAACGAGGGTT+AGG | + | tig0024360:13206-13225 | None:intergenic | 40.0% |
| TGATTGTGGAGTAAGTGCTA+TGG | - | tig0024360:13397-13416 | Msa1416530:intron | 40.0% | |
| GATTGTGGAGTAAGTGCTAT+GGG | - | tig0024360:13398-13417 | Msa1416530:intron | 40.0% | |
| CCAAGTCTTTCAGAAAGCTT+TGG | + | tig0024360:13491-13510 | None:intergenic | 40.0% | |
| ! | CCAAAGCTTTCTGAAAGACT+TGG | - | tig0024360:13488-13507 | Msa1416530:intron | 40.0% |
| CCGTGGAGCTTATAATATGA+TGG | - | tig0024360:14176-14195 | Msa1416530:intron | 40.0% | |
| CCTTTCTCCAAAACATCCTT+TGG | + | tig0024360:14210-14229 | None:intergenic | 40.0% | |
| !!! | CCAAAGGATGTTTTGGAGAA+AGG | - | tig0024360:14207-14226 | Msa1416530:intron | 40.0% |
| ATTCAATCTCTTGGCAGACA+TGG | + | tig0024360:14274-14293 | None:intergenic | 40.0% | |
| GGTAACTGGCATTGCAATAA+CGG | + | tig0024360:14304-14323 | None:intergenic | 40.0% | |
| TAGTCCGAATTTCGATCATG+AGG | + | tig0024360:14477-14496 | None:intergenic | 40.0% | |
| ! | GCCCCATTTTCCTTAAGAAT+CGG | - | tig0024360:14501-14520 | Msa1416530:intron | 40.0% |
| ATGACATCGGGATGATCAAA+AGG | + | tig0024360:14745-14764 | None:intergenic | 40.0% | |
| TGATCATCCCGATGTCATTA+TGG | - | tig0024360:14747-14766 | Msa1416530:intron | 40.0% | |
| GATCATCCCGATGTCATTAT+GGG | - | tig0024360:14748-14767 | Msa1416530:intron | 40.0% | |
| CACATATGCAAACAAACCTC+TGG | + | tig0024360:14895-14914 | None:intergenic | 40.0% | |
| TGCATATGTGTTGTCCTGAT+AGG | - | tig0024360:14905-14924 | Msa1416530:intron | 40.0% | |
| GTGCAATGGAAAAACCTATC+AGG | + | tig0024360:14922-14941 | None:intergenic | 40.0% | |
| CAACTCTTCCAAGTGAACAA+AGG | + | tig0024360:14948-14967 | None:intergenic | 40.0% | |
| !! | TTGGCTTTGTCACTTCATCA+TGG | - | tig0024360:15045-15064 | Msa1416530:CDS | 40.0% |
| TCGATGCACAAATTGCATCA+CGG | + | tig0024360:15188-15207 | None:intergenic | 40.0% | |
| GCAAACTTTCACAAGGGAAA+GGG | + | tig0024360:15224-15243 | None:intergenic | 40.0% | |
| TGCAAACTTTCACAAGGGAA+AGG | + | tig0024360:15225-15244 | None:intergenic | 40.0% | |
| ACACACACCACCATTATCTA+TGG | - | tig0024360:15282-15301 | Msa1416530:CDS | 40.0% | |
| ! | GTAGTTGCCATAGATAATGG+TGG | + | tig0024360:15292-15311 | None:intergenic | 40.0% |
| ATGGCTAGATTTAGTGAAGC+GGG | - | tig0024360:15688-15707 | Msa1416530:CDS | 40.0% | |
| !! | TGGTGCCATTAAATCACAAC+AGG | - | tig0024360:15794-15813 | Msa1416530:intron | 40.0% |
| ATTATAGGTTCGATTCCCCA+CGG | - | tig0024360:15820-15839 | Msa1416530:intron | 40.0% | |
| AGTCCATACAGAGAAAACTC+TGG | - | tig0024360:15861-15880 | Msa1416530:intron | 40.0% | |
| ! | AAGCCAGAGTTTTCTCTGTA+TGG | + | tig0024360:15867-15886 | None:intergenic | 40.0% |
| CAGCAATAGAGCTTCTACAA+TGG | + | tig0024360:16049-16068 | None:intergenic | 40.0% | |
| !! | GAAAGCACTGCAGATTATCT+AGG | - | tig0024360:16180-16199 | Msa1416530:CDS | 40.0% |
| ACATTGGTAAACCTTGTTGC+AGG | - | tig0024360:16208-16227 | Msa1416530:CDS | 40.0% | |
| CTGCAAGTATTATGGACTCA+AGG | - | tig0024360:16301-16320 | Msa1416530:CDS | 40.0% | |
| GCAAGTATTATGGACTCAAG+GGG | - | tig0024360:16303-16322 | Msa1416530:CDS | 40.0% | |
| CAAGTATTATGGACTCAAGG+GGG | - | tig0024360:16304-16323 | Msa1416530:CDS | 40.0% | |
| ! | CAAAACTGTTTGAAACTGCC+AGG | + | tig0024360:16451-16470 | None:intergenic | 40.0% |
| GAACTGAATTTCTTCTGACC+TGG | - | tig0024360:16534-16553 | Msa1416530:intron | 40.0% | |
| AAGAACAACAGCTTTCTCCT+TGG | + | tig0024360:16606-16625 | None:intergenic | 40.0% | |
| GATGTCAATATTCTGAGCAG+TGG | + | tig0024360:16706-16725 | None:intergenic | 40.0% | |
| GACAACTAAGTGTTATGCCA+AGG | - | tig0024360:16784-16803 | Msa1416530:intron | 40.0% | |
| GAAAGATCATTTGCGTCACA+TGG | - | tig0024360:16940-16959 | Msa1416530:intron | 40.0% | |
| ! | AGCTGCCCCATTTGATTTAA+TGG | - | tig0024360:17125-17144 | Msa1416530:intron | 40.0% |
| CTCATTCTGAATATCAGGTC+GGG | + | tig0024360:17262-17281 | None:intergenic | 40.0% | |
| CCTCATTCTGAATATCAGGT+CGG | + | tig0024360:17263-17282 | None:intergenic | 40.0% | |
| TTTACCTTTCCAGAAAGACC+TGG | - | tig0024360:17294-17313 | Msa1416530:intron | 40.0% | |
| ! | GATATTCCATCGTGGACTAA+AGG | + | tig0024360:17343-17362 | None:intergenic | 40.0% |
| TTTATTCCATTACCGTGCAC+AGG | - | tig0024360:17365-17384 | Msa1416530:intron | 40.0% | |
| TGCAAATTCTAACCTGTGCA+CGG | + | tig0024360:17380-17399 | None:intergenic | 40.0% | |
| CGTTGACCAATGCAATCTAA+TGG | - | tig0024360:17455-17474 | Msa1416530:CDS | 40.0% | |
| GCTGGAGCAAATGTATTAGT+TGG | - | tig0024360:17507-17526 | Msa1416530:CDS | 40.0% | |
| CAAAGATTGGGAGGAAGAAA+TGG | - | tig0024360:18024-18043 | Msa1416530:intron | 40.0% | |
| !! | CAATGTCACATTTTGACAGG+AGG | - | tig0024360:18068-18087 | Msa1416530:intron | 40.0% |
| TATGAAATGCAAGTGAGGGA+CGG | - | tig0024360:18215-18234 | Msa1416530:intron | 40.0% | |
| CTCAAGTGTAAGAGCTTTCT+TGG | + | tig0024360:18612-18631 | None:intergenic | 40.0% | |
| ! | TCCCTATGTTGATTGTGTCA+CGG | - | tig0024360:18780-18799 | Msa1416530:intron | 40.0% |
| GTGTATGCGAAAAGATATGC+CGG | - | tig0024360:18830-18849 | Msa1416530:intron | 40.0% | |
| CAAGTGACATCTAGAGAAAC+CGG | + | tig0024360:18852-18871 | None:intergenic | 40.0% | |
| TCATAGGTTCTCTCAATTGG+AGG | - | tig0024360:19251-19270 | Msa1416530:CDS | 40.0% | |
| CTGGAAGAAGATTGTTCAAG+TGG | + | tig0024360:19532-19551 | None:intergenic | 40.0% | |
| CAAAATGACCCAAACCATGG+AGG | - | tig0024360:13103-13122 | Msa1416530:three_prime_UTR | 45.0% | |
| TAGTGTGGTGCATTCTGTGA+CGG | + | tig0024360:13175-13194 | None:intergenic | 45.0% | |
| AACAGACTTTGATACTGCGG+CGG | + | tig0024360:13243-13262 | None:intergenic | 45.0% | |
| TCCAATTATTGAGTCTCCGG+CGG | - | tig0024360:13277-13296 | Msa1416530:three_prime_UTR | 45.0% | |
| GGTGGATACTGAAGTGAATC+CGG | + | tig0024360:13329-13348 | None:intergenic | 45.0% | |
| GATTCACTTCAGTATCCACC+TGG | - | tig0024360:13329-13348 | Msa1416530:three_prime_UTR | 45.0% | |
| TAAGCTGACGTCAGAGACTA+AGG | - | tig0024360:13688-13707 | Msa1416530:intron | 45.0% | |
| AAGCTGACGTCAGAGACTAA+GGG | - | tig0024360:13689-13708 | Msa1416530:intron | 45.0% | |
| ACGTCAGAGACTAAGGGTAA+GGG | - | tig0024360:13695-13714 | Msa1416530:intron | 45.0% | |
| TCAGCTGGAAATCATGCTCA+AGG | - | tig0024360:14243-14262 | Msa1416530:intron | 45.0% | |
| GGCGTTGCAATTCAATCTCT+TGG | + | tig0024360:14283-14302 | None:intergenic | 45.0% | |
| TTGATGTCAGGAGTGGTAAC+TGG | + | tig0024360:14318-14337 | None:intergenic | 45.0% | |
| AGTTACCACTCCTGACATCA+AGG | - | tig0024360:14317-14336 | Msa1416530:intron | 45.0% | |
| GAATACCTTGATGTCAGGAG+TGG | + | tig0024360:14325-14344 | None:intergenic | 45.0% | |
| ACCTTTGCAGTGGAAATCTG+TGG | - | tig0024360:14618-14637 | Msa1416530:intron | 45.0% | |
| TCCACAGATTTCCACTGCAA+AGG | + | tig0024360:14622-14641 | None:intergenic | 45.0% | |
| ! | TGCTAAGAAGCGTGCTATAG+AGG | - | tig0024360:14699-14718 | Msa1416530:intron | 45.0% |
| ! | AAGAAGCGTGCTATAGAGGA+CGG | - | tig0024360:14703-14722 | Msa1416530:intron | 45.0% |
| ACATCGGGATGATCAAAAGG+AGG | + | tig0024360:14742-14761 | None:intergenic | 45.0% | |
| TCCCTGACCCATAATGACAT+CGG | + | tig0024360:14758-14777 | None:intergenic | 45.0% | |
| ATTATGGGTCAGGGAACTGT+CGG | - | tig0024360:14763-14782 | Msa1416530:intron | 45.0% | |
| GGCACAAAGATTGCATGAAC+TGG | + | tig0024360:14817-14836 | None:intergenic | 45.0% | |
| TCATGCAATCTTTGTGCCTG+TGG | - | tig0024360:14819-14838 | Msa1416530:intron | 45.0% | |
| CATGCAATCTTTGTGCCTGT+GGG | - | tig0024360:14820-14839 | Msa1416530:intron | 45.0% | |
| CGTGAAGAGGATAAATCCAG+AGG | - | tig0024360:14876-14895 | Msa1416530:intron | 45.0% | |
| ACAGGTGAAGATAATTGGGG+TGG | - | tig0024360:15002-15021 | Msa1416530:CDS | 45.0% | |
| ACCCACTGATGCAAATGCAT+TGG | - | tig0024360:15026-15045 | Msa1416530:CDS | 45.0% | |
| GCCAATGCATTTGCATCAGT+GGG | + | tig0024360:15030-15049 | None:intergenic | 45.0% | |
| AGCCAATGCATTTGCATCAG+TGG | + | tig0024360:15031-15050 | None:intergenic | 45.0% | |
| ACTTCATCATGGCCAAAGAG+TGG | - | tig0024360:15056-15075 | Msa1416530:CDS | 45.0% | |
| ! | TCATGGCCAAAGAGTGGTTT+TGG | - | tig0024360:15062-15081 | Msa1416530:CDS | 45.0% |
| AGATGGTGTGGCTGTAAAAG+AGG | - | tig0024360:15104-15123 | Msa1416530:intron | 45.0% | |
| !! | TTGTGCAAGGAGTTGGTAGA+TGG | - | tig0024360:15147-15166 | Msa1416530:intron | 45.0% |
| CTAGATTTAGTGAAGCGGGT+TGG | - | tig0024360:15692-15711 | Msa1416530:CDS | 45.0% | |
| TAAGCTGTCATTCGTCCGAA+TGG | - | tig0024360:16075-16094 | Msa1416530:intron | 45.0% | |
| CTCAAACATGTCCTGCAACA+AGG | + | tig0024360:16222-16241 | None:intergenic | 45.0% | |
| CTTGTTGCAGGACATGTTTG+AGG | - | tig0024360:16220-16239 | Msa1416530:CDS | 45.0% | |
| GAAATTCATGTTTGCTCCGG+AGG | + | tig0024360:16348-16367 | None:intergenic | 45.0% | |
| TGAATTTCTTCTGACCTGGC+AGG | - | tig0024360:16538-16557 | Msa1416530:intron | 45.0% | |
| ! | ATTGTGTTGGTGTGCAGTGT+TGG | - | tig0024360:16827-16846 | Msa1416530:intron | 45.0% |
| ! | CAATCTCTCAGACGTTGACT+TGG | - | tig0024360:16916-16935 | Msa1416530:intron | 45.0% |
| CCGACCTGATATTCAGAATG+AGG | - | tig0024360:17260-17279 | Msa1416530:intron | 45.0% | |
| ! | ATCAAAGCACCAGGTCTTTC+TGG | + | tig0024360:17306-17325 | None:intergenic | 45.0% |
| TAGACTCCTTTAGTCCACGA+TGG | - | tig0024360:17334-17353 | Msa1416530:intron | 45.0% | |
| TTCTAACCTGTGCACGGTAA+TGG | + | tig0024360:17374-17393 | None:intergenic | 45.0% | |
| ! | ATGGCTTGTACTTGCTGCTT+CGG | - | tig0024360:17474-17493 | Msa1416530:CDS | 45.0% |
| AGATTGGGAGGAAGAAATGG+TGG | - | tig0024360:18027-18046 | Msa1416530:intron | 45.0% | |
| ! | GGAGGAAGAAATGGTGGAAA+CGG | - | tig0024360:18033-18052 | Msa1416530:intron | 45.0% |
| ! | AAGAAATGGTGGAAACGGAG+TGG | - | tig0024360:18038-18057 | Msa1416530:intron | 45.0% |
| AAGTGAGGGACGGACAAATT+AGG | - | tig0024360:18225-18244 | Msa1416530:intron | 45.0% | |
| CCCGTGACACAATCAACATA+GGG | + | tig0024360:18784-18803 | None:intergenic | 45.0% | |
| ! | CCCTATGTTGATTGTGTCAC+GGG | - | tig0024360:18781-18800 | Msa1416530:intron | 45.0% |
| TCCCGTGACACAATCAACAT+AGG | + | tig0024360:18785-18804 | None:intergenic | 45.0% | |
| CGGTTTCTCTAGATGTCACT+TGG | - | tig0024360:18850-18869 | Msa1416530:intron | 45.0% | |
| !!! | TTTATTAATTGATTTTTTTT+TGG | - | tig0024360:14036-14055 | Msa1416530:intron | 5.0% |
| !!! | TTATTAATTGATTTTTTTTT+GGG | - | tig0024360:14037-14056 | Msa1416530:intron | 5.0% |
| !! | AATGAATAATAAAATATTAT+TGG | + | tig0024360:16810-16829 | None:intergenic | 5.0% |
| !! | AGATTAAAATAAAAATAATT+TGG | + | tig0024360:18748-18767 | None:intergenic | 5.0% |
| !! | TTAGTTATTAAATATTAATT+TGG | - | tig0024360:18968-18987 | Msa1416530:intron | 5.0% |
| !!! | ATATATATATTTTTTTTCAT+AGG | - | tig0024360:19235-19254 | Msa1416530:CDS | 5.0% |
| TGATAATCGTAGCGCCTCCA+TGG | + | tig0024360:13120-13139 | None:intergenic | 50.0% | |
| GCATTCTGTGACGGTGGTTA+CGG | + | tig0024360:13166-13185 | None:intergenic | 50.0% | |
| GGTTAGGGTGAAGAGTAGTG+TGG | + | tig0024360:13190-13209 | None:intergenic | 50.0% | |
| AATTATTGAGTCTCCGGCGG+CGG | - | tig0024360:13280-13299 | Msa1416530:three_prime_UTR | 50.0% | |
| CAGTATCCACCTGGTTACGT+TGG | - | tig0024360:13338-13357 | Msa1416530:intron | 50.0% | |
| ! | GGTGGTGATGAAGGTGATTG+TGG | - | tig0024360:13383-13402 | Msa1416530:intron | 50.0% |
| ! | AGCTTTGGCGCCAATTCAAG+AGG | + | tig0024360:13476-13495 | None:intergenic | 50.0% |
| GACGTCAGAGACTAAGGGTA+AGG | - | tig0024360:13694-13713 | Msa1416530:intron | 50.0% | |
| ACTAAGGGTAAGGGTCCGTT+TGG | - | tig0024360:13704-13723 | Msa1416530:intron | 50.0% | |
| GGGGTTATATGCTCTTCAGC+TGG | - | tig0024360:14228-14247 | Msa1416530:intron | 50.0% | |
| TGCAGTGGAAATCTGTGGAG+AGG | - | tig0024360:14623-14642 | Msa1416530:intron | 50.0% | |
| AGTGGAAATCTGTGGAGAGG+TGG | - | tig0024360:14626-14645 | Msa1416530:intron | 50.0% | |
| GTGGAAATCTGTGGAGAGGT+GGG | - | tig0024360:14627-14646 | Msa1416530:intron | 50.0% | |
| TGGAAATCTGTGGAGAGGTG+GGG | - | tig0024360:14628-14647 | Msa1416530:intron | 50.0% | |
| !! | GGTGCTACTGTGGTCCTTAT+TGG | - | tig0024360:14649-14668 | Msa1416530:intron | 50.0% |
| TCCCGATGTCATTATGGGTC+AGG | - | tig0024360:14753-14772 | Msa1416530:intron | 50.0% | |
| CCCTGACCCATAATGACATC+GGG | + | tig0024360:14757-14776 | None:intergenic | 50.0% | |
| CCCGATGTCATTATGGGTCA+GGG | - | tig0024360:14754-14773 | Msa1416530:intron | 50.0% | |
| TTATGGGTCAGGGAACTGTC+GGG | - | tig0024360:14764-14783 | Msa1416530:intron | 50.0% | |
| CATGAACTGGACGCTTCATC+TGG | + | tig0024360:14804-14823 | None:intergenic | 50.0% | |
| ! | GTATTGCCGCTTACGTGAAG+AGG | - | tig0024360:14863-14882 | Msa1416530:intron | 50.0% |
| ! | GTGAACAAAGGCACGTGCAA+TGG | + | tig0024360:14936-14955 | None:intergenic | 50.0% |
| TGCACGTGCCTTTGTTCACT+TGG | - | tig0024360:14937-14956 | Msa1416530:three_prime_UTR | 50.0% | |
| CCTGGTCCAAAACCACTCTT+TGG | + | tig0024360:15071-15090 | None:intergenic | 50.0% | |
| !!! | CCAAAGAGTGGTTTTGGACC+AGG | - | tig0024360:15068-15087 | Msa1416530:CDS | 50.0% |
| !!! | AGAGTGGTTTTGGACCAGGT+TGG | - | tig0024360:15072-15091 | Msa1416530:CDS | 50.0% |
| CATCTGCAAATCCTCCAACC+TGG | + | tig0024360:15089-15108 | None:intergenic | 50.0% | |
| ! | CAGGTTGGAGGATTTGCAGA+TGG | - | tig0024360:15087-15106 | Msa1416530:CDS | 50.0% |
| TGGAGGATTTGCAGATGGTG+TGG | - | tig0024360:15092-15111 | Msa1416530:intron | 50.0% | |
| GGTGTGGCTGTAAAAGAGGT+TGG | - | tig0024360:15108-15127 | Msa1416530:intron | 50.0% | |
| GGAAACTTTCCGCTTGTGCA+AGG | - | tig0024360:15134-15153 | Msa1416530:intron | 50.0% | |
| TTTCCGCTTGTGCAAGGAGT+TGG | - | tig0024360:15140-15159 | Msa1416530:intron | 50.0% | |
| CTACCAACTCCTTGCACAAG+CGG | + | tig0024360:15146-15165 | None:intergenic | 50.0% | |
| !! | ATTCCCCACGGTGCTGATTT+CGG | - | tig0024360:15832-15851 | Msa1416530:intron | 50.0% |
| ! | GCTTTTAACCAACCCTCGCA+AGG | - | tig0024360:15883-15902 | Msa1416530:intron | 50.0% |
| TTTAACCAACCCTCGCAAGG+TGG | - | tig0024360:15886-15905 | Msa1416530:intron | 50.0% | |
| !! | ATTGGACCCCTCGGATTAGT+CGG | - | tig0024360:15917-15936 | Msa1416530:intron | 50.0% |
| CAAGAACCGACTAATCCGAG+GGG | + | tig0024360:15926-15945 | None:intergenic | 50.0% | |
| GCAAGAACCGACTAATCCGA+GGG | + | tig0024360:15927-15946 | None:intergenic | 50.0% | |
| ! | AGGAGCATATTGGAACCAGC+AGG | - | tig0024360:16248-16267 | Msa1416530:CDS | 50.0% |
| TGCTGTTAACTGTCATGCCG+AGG | - | tig0024360:16423-16442 | Msa1416530:intron | 50.0% | |
| ! | TTTGAAACTGCCAGGCTCCT+CGG | + | tig0024360:16443-16462 | None:intergenic | 50.0% |
| ATTTCTTCTGACCTGGCAGG+TGG | - | tig0024360:16541-16560 | Msa1416530:intron | 50.0% | |
| TTTCTTCTGACCTGGCAGGT+GGG | - | tig0024360:16542-16561 | Msa1416530:intron | 50.0% | |
| ! | AGCACCAGGTCTTTCTGGAA+AGG | + | tig0024360:17301-17320 | None:intergenic | 50.0% |
| ! | TTGTACTTGCTGCTTCGGAC+AGG | - | tig0024360:17479-17498 | Msa1416530:CDS | 50.0% |
| ! | TGTACTTGCTGCTTCGGACA+GGG | - | tig0024360:17480-17499 | Msa1416530:CDS | 50.0% |
| AATTCCTCCATCTCGCTGCT+TGG | + | tig0024360:17543-17562 | None:intergenic | 50.0% | |
| GAATTCAACGATCGTGCCAC+CGG | - | tig0024360:17558-17577 | Msa1416530:CDS | 50.0% | |
| ATAGTCATACCCAAGTCCGG+TGG | + | tig0024360:17577-17596 | None:intergenic | 50.0% | |
| TCGTAGCGCCTCCATGGTTT+GGG | + | tig0024360:13114-13133 | None:intergenic | 55.0% | |
| ATCGTAGCGCCTCCATGGTT+TGG | + | tig0024360:13115-13134 | None:intergenic | 55.0% | |
| TTCTGTGACGGTGGTTACGG+AGG | + | tig0024360:13163-13182 | None:intergenic | 55.0% | |
| TGTGGTGCATTCTGTGACGG+TGG | + | tig0024360:13172-13191 | None:intergenic | 55.0% | |
| GCGGCGGTGGTTGTTATGAA+TGG | + | tig0024360:13224-13243 | None:intergenic | 55.0% | |
| AGACTTTGATACTGCGGCGG+CGG | + | tig0024360:13240-13259 | None:intergenic | 55.0% | |
| GCCGCCGGAGACTCAATAAT+TGG | + | tig0024360:13281-13300 | None:intergenic | 55.0% | |
| TCCGAGGTTGAAGGTTTCGC+CGG | - | tig0024360:13307-13326 | Msa1416530:three_prime_UTR | 55.0% | |
| TCCGGCGAAACCTTCAACCT+CGG | + | tig0024360:13311-13330 | None:intergenic | 55.0% | |
| TCCACCTGGTTACGTTGGAG+CGG | - | tig0024360:13343-13362 | Msa1416530:intron | 55.0% | |
| ! | AGGACACGTGGTGGTGATGA+AGG | - | tig0024360:13374-13393 | Msa1416530:intron | 55.0% |
| GCAATCTTTGTGCCTGTGGG+AGG | - | tig0024360:14823-14842 | Msa1416530:intron | 55.0% | |
| ATCTTTGTGCCTGTGGGAGG+TGG | - | tig0024360:14826-14845 | Msa1416530:intron | 55.0% | |
| !!! | GTGGTTTTGGACCAGGTTGG+AGG | - | tig0024360:15075-15094 | Msa1416530:CDS | 55.0% |
| GGCTGTAAAAGAGGTTGGCG+AGG | - | tig0024360:15113-15132 | Msa1416530:intron | 55.0% | |
| ! | AATGGTGGTGTGTGTGCGTG+TGG | + | tig0024360:15277-15296 | None:intergenic | 55.0% |
| CGCAAGAACCGACTAATCCG+AGG | + | tig0024360:15928-15947 | None:intergenic | 55.0% | |
| TTCTTCTGACCTGGCAGGTG+GGG | - | tig0024360:16543-16562 | Msa1416530:intron | 55.0% | |
| TCAGGTTCCAAGCAGCGAGA+TGG | - | tig0024360:17533-17552 | Msa1416530:CDS | 55.0% | |
| TGGTTACGGAGGAGGAGGTG+AGG | + | tig0024360:13152-13171 | None:intergenic | 60.0% | |
| TGTGACGGTGGTTACGGAGG+AGG | + | tig0024360:13160-13179 | None:intergenic | 60.0% | |
| GGCGAAACCTTCAACCTCGG+AGG | + | tig0024360:13308-13327 | None:intergenic | 60.0% | |
| ACCGCTCCAACGTAACCAGG+TGG | + | tig0024360:13347-13366 | None:intergenic | 60.0% | |
| GGAACCGCTCCAACGTAACC+AGG | + | tig0024360:13350-13369 | None:intergenic | 60.0% | |
| ACGTTGGAGCGGTTCCTGAC+AGG | - | tig0024360:13354-13373 | Msa1416530:intron | 60.0% | |
| GTTCCTGACAGGACACGTGG+TGG | - | tig0024360:13365-13384 | Msa1416530:intron | 60.0% | |
| TCACCACCACGTGTCCTGTC+AGG | + | tig0024360:13371-13390 | None:intergenic | 60.0% | |
| TTTGTGCCTGTGGGAGGTGG+TGG | - | tig0024360:14829-14848 | Msa1416530:intron | 60.0% | |
| ATGAGACCACCACCTCCCAC+AGG | + | tig0024360:14838-14857 | None:intergenic | 60.0% | |
| ! | GGAGGTGGTGGTCTCATTGC+TGG | - | tig0024360:14841-14860 | Msa1416530:intron | 60.0% |
| !! | AAGCGGGTTGGAGAGAGAGC+TGG | - | tig0024360:15704-15723 | Msa1416530:CDS | 60.0% |
| !! | AGCGGGTTGGAGAGAGAGCT+GGG | - | tig0024360:15705-15724 | Msa1416530:CDS | 60.0% |
| GTTGGAGAGAGAGCTGGGAG+TGG | - | tig0024360:15710-15729 | Msa1416530:CDS | 60.0% | |
| GAGAGAGAGCTGGGAGTGGT+AGG | - | tig0024360:15714-15733 | Msa1416530:CDS | 60.0% | |
| CCACCGAAATCAGCACCGTG+GGG | + | tig0024360:15838-15857 | None:intergenic | 60.0% | |
| CCCACCGAAATCAGCACCGT+GGG | + | tig0024360:15839-15858 | None:intergenic | 60.0% | |
| !! | CCCACGGTGCTGATTTCGGT+GGG | - | tig0024360:15836-15855 | Msa1416530:intron | 60.0% |
| ACCCACCGAAATCAGCACCG+TGG | + | tig0024360:15840-15859 | None:intergenic | 60.0% | |
| AACTGTCATGCCGAGGAGCC+TGG | - | tig0024360:16430-16449 | Msa1416530:intron | 60.0% | |
| ATTCATCTGCCCCACCTGCC+AGG | + | tig0024360:16555-16574 | None:intergenic | 60.0% | |
| TGCTTCGGACAGGGTGAAGC+TGG | - | tig0024360:17489-17508 | Msa1416530:CDS | 60.0% | |
| GGTTCCAAGCAGCGAGATGG+AGG | - | tig0024360:17536-17555 | Msa1416530:CDS | 60.0% | |
| AACGATCGTGCCACCGGACT+TGG | - | tig0024360:17564-17583 | Msa1416530:CDS | 60.0% | |
| ACGATCGTGCCACCGGACTT+GGG | - | tig0024360:17565-17584 | Msa1416530:CDS | 60.0% | |
| CGGAGGAGGAGGTGAGGTTG+TGG | + | tig0024360:13146-13165 | None:intergenic | 65.0% | |
| GACGGTGGTTACGGAGGAGG+AGG | + | tig0024360:13157-13176 | None:intergenic | 65.0% | |
| CTTTGATACTGCGGCGGCGG+TGG | + | tig0024360:13237-13256 | None:intergenic | 65.0% | |
| GCGGTTCCTGACAGGACACG+TGG | - | tig0024360:13362-13381 | Msa1416530:intron | 65.0% | |
| !! | GGAGAGGTGGGGTGCTACTG+TGG | - | tig0024360:14639-14658 | Msa1416530:intron | 65.0% |
| GGGTCAGGGAACTGTCGGGA+TGG | - | tig0024360:14768-14787 | Msa1416530:intron | 65.0% | |
| !! | CCCCACGGTGCTGATTTCGG+TGG | - | tig0024360:15835-15854 | Msa1416530:intron | 65.0% |
| ACCAACCCTCGCAAGGTGGC+CGG | - | tig0024360:15890-15909 | Msa1416530:intron | 65.0% | |
| TCCGAGGGGTCCAATCCCAC+CGG | + | tig0024360:15912-15931 | None:intergenic | 65.0% | |
| !! | GCAAGAGCAAGAGCGCCTGC+TGG | + | tig0024360:16266-16285 | None:intergenic | 65.0% |
| GCAGGCGCTCTTGCTCTTGC+TGG | - | tig0024360:16266-16285 | Msa1416530:CDS | 65.0% | |
| GGCGGCTCCTCCGAGGTTGA+AGG | - | tig0024360:13298-13317 | Msa1416530:three_prime_UTR | 70.0% | |
| ACCGGCCACCTTGCGAGGGT+TGG | + | tig0024360:15894-15913 | None:intergenic | 70.0% | |
| AACCCTCGCAAGGTGGCCGG+TGG | - | tig0024360:15893-15912 | Msa1416530:intron | 70.0% | |
| ACCCTCGCAAGGTGGCCGGT+GGG | - | tig0024360:15894-15913 | Msa1416530:intron | 70.0% | |
| TCCCACCGGCCACCTTGCGA+GGG | + | tig0024360:15898-15917 | None:intergenic | 70.0% | |
| ATCCCACCGGCCACCTTGCG+AGG | + | tig0024360:15899-15918 | None:intergenic | 70.0% | |
| CGCAAGGTGGCCGGTGGGAT+TGG | - | tig0024360:15899-15918 | Msa1416530:intron | 70.0% | |
| GCCGGTGGGATTGGACCCCT+CGG | - | tig0024360:15908-15927 | Msa1416530:intron | 70.0% | |
| AACCTCGGAGGAGCCGCCGC+CGG | + | tig0024360:13296-13315 | None:intergenic | 75.0% | |
| ! | CTCCGGCGGCGGCTCCTCCG+AGG | - | tig0024360:13291-13310 | Msa1416530:three_prime_UTR | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0024360 | gene | 13032 | 19577 | 13032 | ID=Msa1416530;Name=Msa1416530 |
| tig0024360 | mRNA | 13032 | 19577 | 13032 | ID=Msa1416530-mRNA-1;Parent=Msa1416530;Name=Msa1416530-mRNA-1;_AED=0.15;_eAED=0.15;_QI=75|0.88|0.9|1|0.88|0.8|10|360|600 |
| tig0024360 | exon | 13032 | 13352 | 13032 | ID=Msa1416530-mRNA-1:exon:22975;Parent=Msa1416530-mRNA-1 |
| tig0024360 | exon | 14929 | 15108 | 14929 | ID=Msa1416530-mRNA-1:exon:22974;Parent=Msa1416530-mRNA-1 |
| tig0024360 | exon | 15223 | 15357 | 15223 | ID=Msa1416530-mRNA-1:exon:22973;Parent=Msa1416530-mRNA-1 |
| tig0024360 | exon | 15648 | 15765 | 15648 | ID=Msa1416530-mRNA-1:exon:22972;Parent=Msa1416530-mRNA-1 |
| tig0024360 | exon | 15979 | 16049 | 15979 | ID=Msa1416530-mRNA-1:exon:22971;Parent=Msa1416530-mRNA-1 |
| tig0024360 | exon | 16140 | 16379 | 16140 | ID=Msa1416530-mRNA-1:exon:22970;Parent=Msa1416530-mRNA-1 |
| tig0024360 | exon | 17397 | 17603 | 17397 | ID=Msa1416530-mRNA-1:exon:22969;Parent=Msa1416530-mRNA-1 |
| tig0024360 | exon | 17712 | 17981 | 17712 | ID=Msa1416530-mRNA-1:exon:22968;Parent=Msa1416530-mRNA-1 |
| tig0024360 | exon | 18271 | 18450 | 18271 | ID=Msa1416530-mRNA-1:exon:22967;Parent=Msa1416530-mRNA-1 |
| tig0024360 | exon | 19062 | 19577 | 19062 | ID=Msa1416530-mRNA-1:exon:22966;Parent=Msa1416530-mRNA-1 |
| tig0024360 | five_prime_UTR | 19503 | 19577 | 19503 | ID=Msa1416530-mRNA-1:five_prime_utr;Parent=Msa1416530-mRNA-1 |
| tig0024360 | CDS | 19062 | 19502 | 19062 | ID=Msa1416530-mRNA-1:cds;Parent=Msa1416530-mRNA-1 |
| tig0024360 | CDS | 18271 | 18450 | 18271 | ID=Msa1416530-mRNA-1:cds;Parent=Msa1416530-mRNA-1 |
| tig0024360 | CDS | 17712 | 17981 | 17712 | ID=Msa1416530-mRNA-1:cds;Parent=Msa1416530-mRNA-1 |
| tig0024360 | CDS | 17397 | 17603 | 17397 | ID=Msa1416530-mRNA-1:cds;Parent=Msa1416530-mRNA-1 |
| tig0024360 | CDS | 16140 | 16379 | 16140 | ID=Msa1416530-mRNA-1:cds;Parent=Msa1416530-mRNA-1 |
| tig0024360 | CDS | 15979 | 16049 | 15979 | ID=Msa1416530-mRNA-1:cds;Parent=Msa1416530-mRNA-1 |
| tig0024360 | CDS | 15648 | 15765 | 15648 | ID=Msa1416530-mRNA-1:cds;Parent=Msa1416530-mRNA-1 |
| tig0024360 | CDS | 15223 | 15357 | 15223 | ID=Msa1416530-mRNA-1:cds;Parent=Msa1416530-mRNA-1 |
| tig0024360 | CDS | 14968 | 15108 | 14968 | ID=Msa1416530-mRNA-1:cds;Parent=Msa1416530-mRNA-1 |
| tig0024360 | three_prime_UTR | 14929 | 14967 | 14929 | ID=Msa1416530-mRNA-1:three_prime_utr;Parent=Msa1416530-mRNA-1 |
| tig0024360 | three_prime_UTR | 13032 | 13352 | 13032 | ID=Msa1416530-mRNA-1:three_prime_utr;Parent=Msa1416530-mRNA-1 |
| Gene Sequence |
| Protein sequence |
