AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0000490

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0000490 MtrunA17_Chr7g0275361 99.091 110 1 0 51 160 39 148 1.59e-78 229
Msa0000490 MtrunA17_Chr3g0108261 95.455 110 5 0 51 160 39 148 4.79e-76 223
Msa0000490 MtrunA17_Chr5g0432831 94.545 110 6 0 51 160 39 148 2.22e-75 221
Msa0000490 MtrunA17_Chr1g0154011 92.727 110 8 0 51 160 39 148 2.59e-74 219
Msa0000490 MtrunA17_Chr4g0037011 92.727 110 8 0 51 160 39 148 2.95e-73 216
Msa0000490 MtrunA17_Chr8g0369311 91.818 110 9 0 51 160 95 204 1.12e-72 217
Msa0000490 MtrunA17_Chr8g0378601 52.778 108 51 0 51 158 60 167 8.97e-40 132
Msa0000490 MtrunA17_Chr2g0316201 53.636 110 51 0 51 160 43 152 1.17e-37 126
Msa0000490 MtrunA17_Chr3g0131871 51.240 121 58 1 39 158 29 149 4.04e-37 126
Msa0000490 MtrunA17_Chr2g0316211 52.727 110 52 0 51 160 43 152 5.03e-37 124
Msa0000490 MtrunA17_Chr8g0362321 47.706 109 52 1 51 154 42 150 1.45e-31 110
Msa0000490 MtrunA17_Chr4g0060351 46.789 109 53 1 51 154 42 150 3.68e-31 109
Msa0000490 MtrunA17_Chr3g0139901 41.964 112 63 2 50 159 42 153 5.68e-26 96.7
Msa0000490 MtrunA17_Chr1g0199951 48.315 89 46 0 51 139 80 168 1.09e-25 97.1
Msa0000490 MtrunA17_Chr4g0038891 48.315 89 46 0 51 139 70 158 1.56e-25 96.3
Msa0000490 MtrunA17_Chr8g0348701 34.722 144 84 3 25 158 4 147 1.64e-25 96.3
Msa0000490 MtrunA17_Chr4g0053191 36.054 147 79 4 13 157 22 155 2.76e-25 95.1
Msa0000490 MtrunA17_Chr5g0396451 47.191 89 47 0 51 139 70 158 4.84e-25 94.7
Msa0000490 MtrunA17_Chr8g0387131 37.500 112 68 2 49 158 36 147 3.57e-24 92.8
Msa0000490 MtrunA17_Chr5g0403591 40.816 98 58 0 54 151 69 166 2.86e-23 90.5
Msa0000490 MtrunA17_Chr5g0401831 34.014 147 82 4 13 157 22 155 2.94e-22 87.0
Msa0000490 MtrunA17_Chr4g0031181 34.862 109 58 1 51 146 43 151 4.46e-21 84.3
Msa0000490 MtrunA17_Chr4g0059291 33.036 112 73 2 49 158 36 147 5.86e-21 84.3
Msa0000490 MtrunA17_Chr2g0328001 31.933 119 68 1 51 156 43 161 8.17e-19 78.6
Msa0000490 MtrunA17_Chr7g0254701 33.043 115 77 0 44 158 41 155 9.91e-19 80.1
Msa0000490 MtrunA17_Chr8g0372391 34.513 113 64 2 3 114 13 116 1.42e-14 67.0
Msa0000490 MtrunA17_Chr5g0404931 32.743 113 66 2 3 114 13 116 1.48e-14 67.0
Msa0000490 MtrunA17_Chr1g0186291 29.592 98 55 2 55 151 30 114 7.35e-13 62.4
Msa0000490 MtrunA17_Chr8g0376111 30.000 130 73 5 39 156 66 189 1.38e-11 61.2
Msa0000490 MtrunA17_Chr7g0222941 33.333 87 48 3 51 127 126 212 5.79e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0000490 AT1G64230.3 74.667 150 37 1 11 160 9 157 2.20e-77 227
Msa0000490 AT1G64230.5 94.545 110 6 0 51 160 81 190 5.93e-76 225
Msa0000490 AT1G64230.4 94.545 110 6 0 51 160 81 190 5.93e-76 225
Msa0000490 AT1G64230.2 94.545 110 6 0 51 160 39 148 9.82e-76 223
Msa0000490 AT1G64230.1 94.545 110 6 0 51 160 39 148 9.82e-76 223
Msa0000490 AT3G08690.2 74.000 150 29 2 11 160 9 148 1.74e-75 222
Msa0000490 AT3G08690.1 74.000 150 29 2 11 160 9 148 1.74e-75 222
Msa0000490 AT5G53300.2 94.545 110 6 0 51 160 39 148 3.00e-75 221
Msa0000490 AT5G53300.4 94.545 110 6 0 51 160 39 148 3.00e-75 221
Msa0000490 AT5G53300.1 94.545 110 6 0 51 160 39 148 3.00e-75 221
Msa0000490 AT4G27960.1 93.636 110 7 0 51 160 39 148 8.05e-75 220
Msa0000490 AT5G41700.5 93.636 110 7 0 51 160 39 148 8.41e-75 220
Msa0000490 AT5G41700.2 93.636 110 7 0 51 160 39 148 8.41e-75 220
Msa0000490 AT5G41700.1 93.636 110 7 0 51 160 39 148 8.41e-75 220
Msa0000490 AT5G41700.4 93.636 110 7 0 51 160 40 149 1.07e-74 220
Msa0000490 AT4G27960.2 83.871 124 20 0 37 160 55 178 3.29e-74 220
Msa0000490 AT5G56150.1 91.818 110 9 0 51 160 39 148 1.85e-73 217
Msa0000490 AT2G16740.1 87.156 109 14 0 51 159 39 147 5.19e-69 206
Msa0000490 AT3G08700.2 80.000 110 22 0 51 160 40 149 6.38e-62 188
Msa0000490 AT3G08700.1 80.000 110 22 0 51 160 40 149 6.38e-62 188
Msa0000490 AT5G53300.3 90.141 71 5 1 51 119 39 109 6.06e-40 130
Msa0000490 AT5G41700.3 92.424 66 5 0 51 116 39 104 7.56e-40 132
Msa0000490 AT5G56150.2 90.769 65 6 0 51 115 39 103 3.73e-39 129
Msa0000490 AT1G36340.2 48.855 131 58 1 28 158 31 152 2.15e-38 128
Msa0000490 AT1G36340.1 48.855 131 58 1 28 158 31 152 2.15e-38 128
Msa0000490 AT1G16890.1 53.636 110 51 0 51 160 10 119 1.08e-37 125
Msa0000490 AT1G16890.2 53.636 110 51 0 51 160 43 152 1.31e-37 126
Msa0000490 AT1G78870.4 53.636 110 51 0 51 160 10 119 1.45e-37 125
Msa0000490 AT1G78870.2 53.636 110 51 0 51 160 43 152 2.10e-37 125
Msa0000490 AT1G16890.3 53.636 110 51 0 51 160 52 161 2.55e-37 126
Msa0000490 AT1G78870.1 53.153 111 51 1 51 160 10 120 8.54e-36 120
Msa0000490 AT3G13550.1 47.222 108 57 0 51 158 74 181 4.24e-35 121
Msa0000490 AT5G50870.1 44.697 132 72 1 28 158 18 149 2.98e-33 116
Msa0000490 AT3G24515.1 45.378 119 61 1 44 158 46 164 4.18e-31 115
Msa0000490 AT5G62540.1 52.083 96 46 0 51 146 42 137 4.75e-31 109
Msa0000490 AT1G14400.1 47.706 109 52 1 51 154 42 150 7.03e-31 109
Msa0000490 AT1G14400.2 47.706 109 52 1 51 154 42 150 7.03e-31 109
Msa0000490 AT2G02760.1 46.789 109 53 1 51 154 42 150 8.45e-31 109
Msa0000490 AT2G02760.2 46.789 109 53 1 51 154 42 150 8.45e-31 109
Msa0000490 AT2G02760.4 46.789 109 53 1 51 154 42 150 8.45e-31 109
Msa0000490 AT2G02760.3 46.789 109 53 1 51 154 42 150 8.45e-31 109
Msa0000490 AT3G24515.3 48.214 112 54 1 51 158 78 189 9.23e-31 115
Msa0000490 AT5G50870.2 38.509 161 85 3 10 158 2 160 7.79e-30 108
Msa0000490 AT2G32790.1 52.586 116 51 2 47 160 64 177 4.26e-29 105
Msa0000490 AT5G41340.1 40.708 113 65 2 48 158 35 147 6.01e-26 97.8
Msa0000490 AT1G63800.1 35.417 144 83 3 25 158 4 147 1.11e-25 97.1
Msa0000490 AT1G63800.2 39.823 113 66 2 48 158 20 132 2.82e-25 95.5
Msa0000490 AT2G46030.5 39.286 112 66 2 49 158 36 147 6.44e-25 95.1
Msa0000490 AT2G46030.1 39.286 112 66 2 49 158 36 147 6.44e-25 95.1
Msa0000490 AT2G46030.4 39.286 112 66 2 49 158 39 150 7.79e-25 94.7
Msa0000490 AT2G46030.2 39.286 112 66 2 49 158 39 150 7.79e-25 94.7
Msa0000490 AT2G46030.3 39.286 112 66 2 49 158 108 219 9.20e-25 96.3
Msa0000490 AT5G25760.1 41.441 111 63 2 51 159 43 153 1.01e-24 94.0
Msa0000490 AT5G25760.2 41.441 111 63 2 51 159 43 153 1.01e-24 94.0
Msa0000490 AT1G50490.1 47.191 89 47 0 51 139 73 161 5.46e-24 92.4
Msa0000490 AT3G13550.2 49.351 77 39 0 51 127 74 150 8.34e-24 91.7
Msa0000490 AT3G57870.1 34.694 147 81 4 13 157 23 156 1.66e-23 90.9
Msa0000490 AT5G41340.2 40.385 104 60 2 57 158 9 112 2.67e-23 90.1
Msa0000490 AT3G20060.2 46.067 89 48 0 51 139 29 117 3.33e-23 89.4
Msa0000490 AT3G20060.1 46.067 89 48 0 51 139 74 162 5.25e-23 90.1
Msa0000490 AT4G36800.2 40.816 98 58 0 54 151 70 167 8.02e-23 89.7
Msa0000490 AT4G36800.1 40.816 98 58 0 54 151 70 167 8.02e-23 89.7
Msa0000490 AT1G78870.3 55.714 70 31 0 51 120 43 112 5.21e-22 85.5
Msa0000490 AT3G55380.1 34.862 109 58 1 51 146 44 152 9.47e-21 84.0
Msa0000490 AT5G05080.2 35.088 114 74 0 45 158 42 155 1.39e-20 85.1
Msa0000490 AT5G05080.3 35.088 114 74 0 45 158 42 155 1.39e-20 85.1
Msa0000490 AT5G05080.1 35.088 114 74 0 45 158 42 155 1.39e-20 85.1
Msa0000490 AT5G05080.4 35.088 114 74 0 45 158 42 155 1.39e-20 85.1
Msa0000490 AT2G18600.1 38.947 95 58 0 57 151 74 168 4.13e-20 82.8
Msa0000490 AT2G18600.2 38.947 95 58 0 57 151 74 168 4.13e-20 82.8
Msa0000490 AT5G59300.1 32.773 119 67 1 51 156 43 161 2.68e-19 80.1
Msa0000490 AT3G46460.1 31.933 119 68 1 51 156 43 161 4.06e-19 79.7
Msa0000490 AT3G46460.3 30.631 111 64 1 59 156 9 119 1.09e-16 72.0
Msa0000490 AT3G46460.2 30.631 111 64 1 59 156 9 119 1.09e-16 72.0
Msa0000490 AT4G36410.1 35.345 116 59 4 5 119 17 117 1.82e-14 67.4
Msa0000490 AT1G75440.1 33.898 118 64 3 3 119 13 117 1.08e-13 65.1
Msa0000490 AT3G55380.2 26.573 143 58 2 51 146 44 186 1.12e-13 65.9
Msa0000490 AT5G42990.1 38.043 92 47 2 24 114 34 116 1.56e-13 64.7
Msa0000490 AT1G45050.1 35.870 92 49 2 24 114 34 116 4.51e-13 63.5

Find 77 sgRNAs with CRISPR-Local

Find 206 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGATATGATATTAATATTAT+TGG 0.139100 1_1:-1650355 None:intergenic
CTACCATTGCTGTTGATATT+TGG 0.157251 1_1:-1649007 None:intergenic
TCCTCTTGCAGGTTGCATTT+AGG 0.232826 1_1:+1648969 Msa0000490:intron
TCTACCCTTCAATATGTTAA+AGG 0.256916 1_1:-1650252 None:intergenic
GATATGATATTAATATTATT+GGG 0.302274 1_1:-1650354 None:intergenic
TACCATTGCTGTTGATATTT+GGG 0.310209 1_1:-1649006 None:intergenic
TCATTGGCAAGCAACTATAA+TGG 0.311891 1_1:+1648654 Msa0000490:CDS
CCGAGCAGTGGTTTCATACT+TGG 0.316742 1_1:-1649999 None:intergenic
CCCCGCTTTGACAATATCTA+AGG 0.320617 1_1:+1649063 Msa0000490:CDS
CTTAAAATGCAGAATCTTAC+CGG 0.334161 1_1:-1650127 None:intergenic
TTGTACATATGAGCTATTTC+AGG 0.338906 1_1:-1649965 None:intergenic
TCAGGCACTAAGGGATCATC+TGG 0.351772 1_1:-1649947 None:intergenic
CATTGGCAAGCAACTATAAT+GGG 0.363377 1_1:+1648655 Msa0000490:CDS
CCGCTTGGAGGCCATGGAAT+TGG 0.370420 1_1:-1647389 None:intergenic
ATCCATTTGTTCCCTGTTGA+CGG 0.377667 1_1:+1649916 Msa0000490:CDS
CTGGGTTTGGATCCGTCAAC+AGG 0.381343 1_1:-1649928 None:intergenic
CCTCCGGCATAAGGGCTATC+GGG 0.386301 1_1:-1648681 None:intergenic
AATACCTTGGGTGGCTTGAA+TGG 0.396161 1_1:-1648741 None:intergenic
AAATACCCTACCGGAGCTTC+CGG 0.406576 1_1:+1650108 Msa0000490:three_prime_UTR
CATTTGTCTTGATATCTTGA+AGG 0.425170 1_1:+1649030 Msa0000490:CDS
TGAAACATGTCTTCTGCTAC+AGG 0.438785 1_1:-1648634 None:intergenic
GGTGGCTTGAATGGATAATC+AGG 0.441447 1_1:-1648732 None:intergenic
TCCTGCCTTTAACATATTGA+AGG 0.445265 1_1:+1650247 Msa0000490:three_prime_UTR
CCTCCAACCTCTTGCAGCGC+TGG 0.445639 1_1:+1647445 Msa0000490:CDS
ATGAGCTATTTCAGGCACTA+AGG 0.452215 1_1:-1649957 None:intergenic
ACATCATGACACTTGACAAA+TGG 0.455050 1_1:-1650197 None:intergenic
ATCCGTCAACAGGGAACAAA+TGG 0.455293 1_1:-1649918 None:intergenic
TAGCAGAAGACATGTTTCAT+TGG 0.456534 1_1:+1648638 Msa0000490:CDS
ACCTTAGATATTGTCAAAGC+GGG 0.466865 1_1:-1649064 None:intergenic
TTGGATGAGCAATCACTTGT+TGG 0.471250 1_1:+1650154 Msa0000490:three_prime_UTR
TCCTCCGGCATAAGGGCTAT+CGG 0.475958 1_1:-1648682 None:intergenic
CACTTGACAAATGGAACTAA+AGG 0.479533 1_1:-1650188 None:intergenic
ATGAAACCACTGCTCGGAGC+TGG 0.483029 1_1:+1650005 Msa0000490:CDS
TTCCTTGAGGATCCGCTTGG+AGG 0.486492 1_1:-1647401 None:intergenic
ACTAAGGGATCATCTGGGTT+TGG 0.496633 1_1:-1649941 None:intergenic
CAGAATCTTACCGGAAGCTC+CGG 0.502715 1_1:-1650118 None:intergenic
GATATTTGGGTGGAAAACTT+TGG 0.515591 1_1:-1648993 None:intergenic
CCCTTCAATATGTTAAAGGC+AGG 0.522335 1_1:-1650248 None:intergenic
AAAGGGAAATTCCAATTCCA+TGG 0.525940 1_1:+1647378 Msa0000490:CDS
GAGGATCCGCTTGGAGGCCA+TGG 0.529842 1_1:-1647395 None:intergenic
TTACCAGCGCTGCAAGAGGT+TGG 0.534725 1_1:-1647448 None:intergenic
TTTAGATCGAAAACTTCGAA+AGG 0.536387 1_1:+1647360 Msa0000490:intron
CTCCGGCATAAGGGCTATCG+GGG 0.543082 1_1:-1648680 None:intergenic
TGGACTCAGAAGTATGCAAT+GGG 0.546656 1_1:+1650025 Msa0000490:CDS
CAATGGGCTAGCAAGAATGT+TGG 0.547649 1_1:+1650041 Msa0000490:exon
GAAGGTCCTTGAGTTCCTTG+AGG 0.550730 1_1:-1647414 None:intergenic
TTAGATCGAAAACTTCGAAA+GGG 0.552269 1_1:+1647361 Msa0000490:intron
CTCATATGTACAAGACAGAC+AGG 0.552335 1_1:+1649975 Msa0000490:CDS
CTGAGTCCAGCTCCGAGCAG+TGG 0.563687 1_1:-1650011 None:intergenic
TGAGCTATTTCAGGCACTAA+GGG 0.565316 1_1:-1649956 None:intergenic
GAGTTCCTTGAGGATCCGCT+TGG 0.568666 1_1:-1647404 None:intergenic
CCAGCGCTGCAAGAGGTTGG+AGG 0.569494 1_1:-1647445 None:intergenic
CCTGCCTTTAACATATTGAA+GGG 0.573198 1_1:+1650248 Msa0000490:three_prime_UTR
CTGGACTCAGAAGTATGCAA+TGG 0.576388 1_1:+1650024 Msa0000490:CDS
CATTGCTGTTGATATTTGGG+TGG 0.580692 1_1:-1649003 None:intergenic
AAACTGTCAAAATACCCTAC+CGG 0.582333 1_1:+1650099 Msa0000490:three_prime_UTR
CACCCAAATATCAACAGCAA+TGG 0.585534 1_1:+1649004 Msa0000490:CDS
CCCGATAGCCCTTATGCCGG+AGG 0.589705 1_1:+1648681 Msa0000490:CDS
ATAATCAGGAGGAAAATGAA+TGG 0.590246 1_1:-1648718 None:intergenic
AAAATTACCAGCGCTGCAAG+AGG 0.599526 1_1:-1647452 None:intergenic
CCAAGTATGAAACCACTGCT+CGG 0.606579 1_1:+1649999 Msa0000490:CDS
TTGATATCTTGAAGGAGCAG+TGG 0.609569 1_1:+1649038 Msa0000490:CDS
AGGTTGGAGGATCTTTCTGA+AGG 0.613443 1_1:-1647432 None:intergenic
ACAAAGTCCAATACCTTGGG+TGG 0.615790 1_1:-1648750 None:intergenic
GCGGATCCTCAAGGAACTCA+AGG 0.617012 1_1:+1647408 Msa0000490:CDS
TCTTACCGGAAGCTCCGGTA+GGG 0.623253 1_1:-1650113 None:intergenic
GGCCTCCAAGCGGATCCTCA+AGG 0.623432 1_1:+1647399 Msa0000490:CDS
ATCTTACCGGAAGCTCCGGT+AGG 0.624374 1_1:-1650114 None:intergenic
CAGGCACTAAGGGATCATCT+GGG 0.628144 1_1:-1649946 None:intergenic
AACCTTAGATATTGTCAAAG+CGG 0.632820 1_1:-1649065 None:intergenic
TCCGGCATAAGGGCTATCGG+GGG 0.634729 1_1:-1648679 None:intergenic
GAAACATGTCTTCTGCTACA+GGG 0.642755 1_1:-1648633 None:intergenic
TGGGTTTGGATCCGTCAACA+GGG 0.654519 1_1:-1649927 None:intergenic
GGCTTGAATGGATAATCAGG+AGG 0.662651 1_1:-1648729 None:intergenic
TTATCCATTCAAGCCACCCA+AGG 0.669594 1_1:+1648737 Msa0000490:CDS
CCTTAGATATTGTCAAAGCG+GGG 0.699087 1_1:-1649063 None:intergenic
CCAATTCCATGGCCTCCAAG+CGG 0.707253 1_1:+1647389 Msa0000490:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTGTTAATATTGTTAA+AGG + chr1_1:1647681-1647700 Msa0000490:intron 10.0%
!! GATATGATATTAATATTATT+GGG - chr1_1:1650357-1650376 None:intergenic 10.0%
!! AGATATGATATTAATATTAT+TGG - chr1_1:1650358-1650377 None:intergenic 10.0%
!!! TAGTTTTTTTTGTTGATTTT+AGG - chr1_1:1646977-1646996 None:intergenic 15.0%
!!! TTTATTATCGATGATTTTAA+AGG + chr1_1:1647061-1647080 Msa0000490:intron 15.0%
!! AATTAAATACCCAAAAAATA+TGG + chr1_1:1647146-1647165 Msa0000490:intron 15.0%
!! TTAGTTATACAATCATATAT+AGG - chr1_1:1647985-1648004 None:intergenic 15.0%
!! AAACTATGTAGAAATTAAGA+CGG - chr1_1:1647098-1647117 None:intergenic 20.0%
!!! TTTTGGGTATTTAATTCAAT+AGG - chr1_1:1647142-1647161 None:intergenic 20.0%
!!! ATTTTGCACTTATATCTATA+TGG + chr1_1:1647532-1647551 Msa0000490:intron 20.0%
!!! TTTTGCACTTATATCTATAT+GGG + chr1_1:1647533-1647552 Msa0000490:intron 20.0%
!! AGAAAAAAGTTTAGTATGTT+TGG + chr1_1:1647738-1647757 Msa0000490:intron 20.0%
!!! TGAGTTGAAAAATAAATTCA+AGG - chr1_1:1647962-1647981 None:intergenic 20.0%
!!! TAAATATATTTTTGCAACTC+AGG - chr1_1:1648488-1648507 None:intergenic 20.0%
!! AAAAAAAAATTTAGCACAAG+TGG - chr1_1:1649131-1649150 None:intergenic 20.0%
!! ACCAATTTCAAAAAGATTAT+TGG + chr1_1:1649437-1649456 Msa0000490:intron 20.0%
!!! ACCAATAATCTTTTTGAAAT+TGG - chr1_1:1649441-1649460 None:intergenic 20.0%
!! ACATAGTTTTCCATCTTTTT+TGG + chr1_1:1647109-1647128 Msa0000490:intron 25.0%
!! CATAGTTTTCCATCTTTTTT+GGG + chr1_1:1647110-1647129 Msa0000490:intron 25.0%
!!! TGAGTTGATCCATATTTTTT+GGG - chr1_1:1647158-1647177 None:intergenic 25.0%
! AAAAGTTTAGTATGTTTGGT+TGG + chr1_1:1647742-1647761 Msa0000490:intron 25.0%
!!! GAAATTGATTTTGACATGTT+TGG + chr1_1:1647846-1647865 Msa0000490:intron 25.0%
! TAGATCAGAATAAATTCTTG+AGG - chr1_1:1647897-1647916 None:intergenic 25.0%
! TAACTTGAACTAGAATTTGT+AGG + chr1_1:1648083-1648102 Msa0000490:intron 25.0%
!!! TTGTTCAATACACTTTTTCA+TGG + chr1_1:1648142-1648161 Msa0000490:intron 25.0%
! CGTTCTATTAAGAATTATCA+TGG + chr1_1:1648334-1648353 Msa0000490:intron 25.0%
! AATTCAGTTATATTTGTCTG+TGG + chr1_1:1648369-1648388 Msa0000490:intron 25.0%
!! AAATACATTTTTGCAACTCT+AGG + chr1_1:1649171-1649190 Msa0000490:intron 25.0%
! ATTCATCATAAATGCAAAAC+TGG - chr1_1:1649413-1649432 None:intergenic 25.0%
!!! ATGTGTTGATGATGTTTATT+CGG + chr1_1:1649583-1649602 Msa0000490:intron 25.0%
!!! GTATGCTTTGAAATATCTTA+AGG + chr1_1:1649631-1649650 Msa0000490:intron 25.0%
!! TTTTGTTGATGTGATACAAT+TGG + chr1_1:1649726-1649745 Msa0000490:intron 25.0%
! ATAAAAGAATGACACACTAA+GGG - chr1_1:1649795-1649814 None:intergenic 25.0%
!! TATTACTACTGTTTCTTAAG+TGG + chr1_1:1649855-1649874 Msa0000490:intron 25.0%
!! ATTACTACTGTTTCTTAAGT+GGG + chr1_1:1649856-1649875 Msa0000490:intron 25.0%
!!! CTGAGTTGATCCATATTTTT+TGG - chr1_1:1647159-1647178 None:intergenic 30.0%
AAAAACTCAATTAGTGGTAG+TGG - chr1_1:1647270-1647289 None:intergenic 30.0%
GGAAAGAAAAACTCAATTAG+TGG - chr1_1:1647276-1647295 None:intergenic 30.0%
! TTTCCCTTTTCTTTTCTTGT+TGG + chr1_1:1647291-1647310 Msa0000490:intron 30.0%
CAACCAACAAGAAAAGAAAA+GGG - chr1_1:1647297-1647316 None:intergenic 30.0%
TCAACCAACAAGAAAAGAAA+AGG - chr1_1:1647298-1647317 None:intergenic 30.0%
GTAAAAAAGTTGAAGAGAGA+GGG - chr1_1:1647338-1647357 None:intergenic 30.0%
AGTAAAAAAGTTGAAGAGAG+AGG - chr1_1:1647339-1647358 None:intergenic 30.0%
TTTAGATCGAAAACTTCGAA+AGG + chr1_1:1647360-1647379 Msa0000490:intron 30.0%
TTAGATCGAAAACTTCGAAA+GGG + chr1_1:1647361-1647380 Msa0000490:intron 30.0%
!! TCGTTTTTCCATTTGTATCA+TGG + chr1_1:1647562-1647581 Msa0000490:intron 30.0%
! CGTTTTTCCATTTGTATCAT+GGG + chr1_1:1647563-1647582 Msa0000490:intron 30.0%
TAACAAACCCATGATACAAA+TGG - chr1_1:1647573-1647592 None:intergenic 30.0%
!! TTTCTGTTGCTAGTTTGTTT+AGG + chr1_1:1647611-1647630 Msa0000490:intron 30.0%
!! GACATGTTTGATTTCACTTT+TGG + chr1_1:1647805-1647824 Msa0000490:intron 30.0%
!! ATGTTTGATTTCACTTTTGG+AGG + chr1_1:1647808-1647827 Msa0000490:intron 30.0%
! GATCTAAAGCTAGAATTTGT+AGG + chr1_1:1647911-1647930 Msa0000490:intron 30.0%
CTTTACCTCAAACTTACTTT+CGG + chr1_1:1648015-1648034 Msa0000490:intron 30.0%
!! GTGGTGTTACAAATTGATTA+TGG - chr1_1:1648041-1648060 None:intergenic 30.0%
! AAAAACAGGTTTTCAGCTTT+AGG - chr1_1:1648288-1648307 None:intergenic 30.0%
! TAAAGCTGAAAACCTGTTTT+TGG + chr1_1:1648287-1648306 Msa0000490:intron 30.0%
TCTTAATAGAACGCAAAAGA+GGG - chr1_1:1648327-1648346 None:intergenic 30.0%
TTCTTAATAGAACGCAAAAG+AGG - chr1_1:1648328-1648347 None:intergenic 30.0%
TTACAAGACATGCATCTAAT+TGG - chr1_1:1648404-1648423 None:intergenic 30.0%
ATAATCAGGAGGAAAATGAA+TGG - chr1_1:1648721-1648740 None:intergenic 30.0%
AAAACAAAGTCCAATACCTT+GGG - chr1_1:1648756-1648775 None:intergenic 30.0%
!!! TTTGTTTTGCTTGACATATC+AGG + chr1_1:1648768-1648787 Msa0000490:intron 30.0%
! TACCATTGCTGTTGATATTT+GGG - chr1_1:1649009-1649028 None:intergenic 30.0%
CATTTGTCTTGATATCTTGA+AGG + chr1_1:1649030-1649049 Msa0000490:CDS 30.0%
AACCTTAGATATTGTCAAAG+CGG - chr1_1:1649068-1649087 None:intergenic 30.0%
TGGTAACTTTGGACTTTATT+AGG + chr1_1:1649220-1649239 Msa0000490:intron 30.0%
GGACTTTATTAGGTTTACAA+AGG + chr1_1:1649230-1649249 Msa0000490:intron 30.0%
GGACTTTATTAGGTTTACAA+AGG + chr1_1:1649230-1649249 Msa0000490:intron 30.0%
TAAAAGAATGACACACTAAG+GGG - chr1_1:1649794-1649813 None:intergenic 30.0%
GATAAAAGAATGACACACTA+AGG - chr1_1:1649796-1649815 None:intergenic 30.0%
! TCTTTTATCATTGCAATGCA+TGG + chr1_1:1649807-1649826 Msa0000490:intron 30.0%
! TTGTACATATGAGCTATTTC+AGG - chr1_1:1649968-1649987 None:intergenic 30.0%
!!! GACAGTTTTTAGCATATAAG+AGG - chr1_1:1650087-1650106 None:intergenic 30.0%
CTTAAAATGCAGAATCTTAC+CGG - chr1_1:1650130-1650149 None:intergenic 30.0%
! TAAGATTCTGCATTTTAAGC+TGG + chr1_1:1650131-1650150 Msa0000490:three_prime_UTR 30.0%
TCTACCCTTCAATATGTTAA+AGG - chr1_1:1650255-1650274 None:intergenic 30.0%
!!! TTTCCATCTTTTTTGGGCTT+AGG + chr1_1:1647116-1647135 Msa0000490:intron 35.0%
!! TCTTTTCTTGTTGGTTGAAG+AGG + chr1_1:1647300-1647319 Msa0000490:intron 35.0%
AAAGGGAAATTCCAATTCCA+TGG + chr1_1:1647378-1647397 Msa0000490:CDS 35.0%
ATTCATAGATCCAAGGATGA+GGG - chr1_1:1647514-1647533 None:intergenic 35.0%
AATTCATAGATCCAAGGATG+AGG - chr1_1:1647515-1647534 None:intergenic 35.0%
GTGCAAAATTCATAGATCCA+AGG - chr1_1:1647521-1647540 None:intergenic 35.0%
! GCAGCAAAATTTGTTTGTAG+AGG + chr1_1:1647777-1647796 Msa0000490:intron 35.0%
TTGGAGGATGCAAAATTGAT+TGG + chr1_1:1647824-1647843 Msa0000490:intron 35.0%
TCTGTGTGTGTTTAGTTATG+TGG - chr1_1:1648060-1648079 None:intergenic 35.0%
TAGCAGAAGACATGTTTCAT+TGG + chr1_1:1648638-1648657 Msa0000490:CDS 35.0%
TCATTGGCAAGCAACTATAA+TGG + chr1_1:1648654-1648673 Msa0000490:CDS 35.0%
CATTGGCAAGCAACTATAAT+GGG + chr1_1:1648655-1648674 Msa0000490:CDS 35.0%
CAAAACAAAGTCCAATACCT+TGG - chr1_1:1648757-1648776 None:intergenic 35.0%
GAGGAGGTTAAGTATCATAA+AGG - chr1_1:1648837-1648856 None:intergenic 35.0%
! TCCAAATACAAGCTTTGATC+TGG + chr1_1:1648891-1648910 Msa0000490:intron 35.0%
! TTTAACCTTTTTCCTCTTGC+AGG + chr1_1:1648958-1648977 Msa0000490:intron 35.0%
GATATTTGGGTGGAAAACTT+TGG - chr1_1:1648996-1649015 None:intergenic 35.0%
! CTACCATTGCTGTTGATATT+TGG - chr1_1:1649010-1649029 None:intergenic 35.0%
ACCTTAGATATTGTCAAAGC+GGG - chr1_1:1649067-1649086 None:intergenic 35.0%
TTGAGTTAACGAGTTAAGCA+TGG - chr1_1:1649094-1649113 None:intergenic 35.0%
!! TCTAGGATATGTGTGTGTTT+TGG + chr1_1:1649188-1649207 Msa0000490:intron 35.0%
GATGTTTACTCTGCATAATC+AGG + chr1_1:1649324-1649343 Msa0000490:intron 35.0%
TCCTGAAGTTGGACTTTATT+AGG + chr1_1:1649489-1649508 Msa0000490:intron 35.0%
ACCTAATAAAGTCCAACTTC+AGG - chr1_1:1649493-1649512 None:intergenic 35.0%
GATGTTTATTCGGCATAATC+TGG + chr1_1:1649593-1649612 Msa0000490:intron 35.0%
GAAAGACCTTACAAGTAAAC+TGG - chr1_1:1649663-1649682 None:intergenic 35.0%
ATTCGTCGTAAATGCATAAC+TGG - chr1_1:1649685-1649704 None:intergenic 35.0%
GGAATTTATAGCGACAACTT+AGG - chr1_1:1649768-1649787 None:intergenic 35.0%
! GGTTTGTGTTTGGTTATTTC+AGG + chr1_1:1649886-1649905 Msa0000490:intron 35.0%
AAACTGTCAAAATACCCTAC+CGG + chr1_1:1650099-1650118 Msa0000490:three_prime_UTR 35.0%
! ATTCTGCATTTTAAGCTGGT+TGG + chr1_1:1650135-1650154 Msa0000490:three_prime_UTR 35.0%
CACTTGACAAATGGAACTAA+AGG - chr1_1:1650191-1650210 None:intergenic 35.0%
ACATCATGACACTTGACAAA+TGG - chr1_1:1650200-1650219 None:intergenic 35.0%
TCCTGCCTTTAACATATTGA+AGG + chr1_1:1650247-1650266 Msa0000490:three_prime_UTR 35.0%
CCTGCCTTTAACATATTGAA+GGG + chr1_1:1650248-1650267 Msa0000490:three_prime_UTR 35.0%
!! AATCGTTTTGTTACTCAGAC+AGG - chr1_1:1650290-1650309 None:intergenic 35.0%
AAAGTTGAAGAGAGAGGGAA+CGG - chr1_1:1647333-1647352 None:intergenic 40.0%
AAGCAGAAAATGGGGTTTGA+GGG - chr1_1:1647484-1647503 None:intergenic 40.0%
! GGTGTTTGAAGCAGAAAATG+GGG - chr1_1:1647492-1647511 None:intergenic 40.0%
! GGGTGTTTGAAGCAGAAAAT+GGG - chr1_1:1647493-1647512 None:intergenic 40.0%
TTCATAGATCCAAGGATGAG+GGG - chr1_1:1647513-1647532 None:intergenic 40.0%
TATGGCCGAAAGTAAGTTTG+AGG - chr1_1:1648023-1648042 None:intergenic 40.0%
! GACGTTTGAAGTCCAAAAAC+AGG - chr1_1:1648302-1648321 None:intergenic 40.0%
! GTTTTATCCACTACCTTCAC+AGG + chr1_1:1648610-1648629 Msa0000490:intron 40.0%
GAAACATGTCTTCTGCTACA+GGG - chr1_1:1648636-1648655 None:intergenic 40.0%
TGAAACATGTCTTCTGCTAC+AGG - chr1_1:1648637-1648656 None:intergenic 40.0%
GGTAACTAGAAAAACTCCTC+CGG - chr1_1:1648700-1648719 None:intergenic 40.0%
ACTTAACCTCCTCTATTTCC+TGG + chr1_1:1648844-1648863 Msa0000490:intron 40.0%
! TTTTTCCAGCCAGGAAATAG+AGG - chr1_1:1648856-1648875 None:intergenic 40.0%
!!! CTCACAATTTTTTTCCAGCC+AGG - chr1_1:1648865-1648884 None:intergenic 40.0%
GCCAGATCAAAGCTTGTATT+TGG - chr1_1:1648895-1648914 None:intergenic 40.0%
! CATTGCTGTTGATATTTGGG+TGG - chr1_1:1649006-1649025 None:intergenic 40.0%
CACCCAAATATCAACAGCAA+TGG + chr1_1:1649004-1649023 Msa0000490:CDS 40.0%
TTGATATCTTGAAGGAGCAG+TGG + chr1_1:1649038-1649057 Msa0000490:CDS 40.0%
CCTTAGATATTGTCAAAGCG+GGG - chr1_1:1649066-1649085 None:intergenic 40.0%
AACCTTCACAATCCTGAAGT+TGG + chr1_1:1649478-1649497 Msa0000490:intron 40.0%
TAGCTGCCAGTTTACTTGTA+AGG + chr1_1:1649654-1649673 Msa0000490:intron 40.0%
CGACAACTTAGGAATTGTGA+CGG - chr1_1:1649757-1649776 None:intergenic 40.0%
! ACTACTGTTTCTTAAGTGGG+TGG + chr1_1:1649859-1649878 Msa0000490:intron 40.0%
! CTACTGTTTCTTAAGTGGGT+GGG + chr1_1:1649860-1649879 Msa0000490:intron 40.0%
ATCCATTTGTTCCCTGTTGA+CGG + chr1_1:1649916-1649935 Msa0000490:CDS 40.0%
! TGAGCTATTTCAGGCACTAA+GGG - chr1_1:1649959-1649978 None:intergenic 40.0%
! ATGAGCTATTTCAGGCACTA+AGG - chr1_1:1649960-1649979 None:intergenic 40.0%
CTCATATGTACAAGACAGAC+AGG + chr1_1:1649975-1649994 Msa0000490:CDS 40.0%
! TGGACTCAGAAGTATGCAAT+GGG + chr1_1:1650025-1650044 Msa0000490:CDS 40.0%
TTGGATGAGCAATCACTTGT+TGG + chr1_1:1650154-1650173 Msa0000490:three_prime_UTR 40.0%
CCCTTCAATATGTTAAAGGC+AGG - chr1_1:1650251-1650270 None:intergenic 40.0%
AGGCCTAAGCCCAAAAAAGA+TGG - chr1_1:1647122-1647141 None:intergenic 45.0%
! TTCTTGTTGGTTGAAGAGGC+AGG + chr1_1:1647304-1647323 Msa0000490:intron 45.0%
AGGTTGGAGGATCTTTCTGA+AGG - chr1_1:1647435-1647454 None:intergenic 45.0%
AAAATTACCAGCGCTGCAAG+AGG - chr1_1:1647455-1647474 None:intergenic 45.0%
GAAGCAGAAAATGGGGTTTG+AGG - chr1_1:1647485-1647504 None:intergenic 45.0%
! GGGGTGTTTGAAGCAGAAAA+TGG - chr1_1:1647494-1647513 None:intergenic 45.0%
GAAAAACTCCTCCGGCATAA+GGG - chr1_1:1648692-1648711 None:intergenic 45.0%
AGAAAAACTCCTCCGGCATA+AGG - chr1_1:1648693-1648712 None:intergenic 45.0%
GGCTTGAATGGATAATCAGG+AGG - chr1_1:1648732-1648751 None:intergenic 45.0%
GGTGGCTTGAATGGATAATC+AGG - chr1_1:1648735-1648754 None:intergenic 45.0%
TTATCCATTCAAGCCACCCA+AGG + chr1_1:1648737-1648756 Msa0000490:CDS 45.0%
AATACCTTGGGTGGCTTGAA+TGG - chr1_1:1648744-1648763 None:intergenic 45.0%
ATTCAAGCCACCCAAGGTAT+TGG + chr1_1:1648743-1648762 Msa0000490:intron 45.0%
ACAAAGTCCAATACCTTGGG+TGG - chr1_1:1648753-1648772 None:intergenic 45.0%
TGCAACCTGCAAGAGGAAAA+AGG - chr1_1:1648966-1648985 None:intergenic 45.0%
TCCTCTTGCAGGTTGCATTT+AGG + chr1_1:1648969-1648988 Msa0000490:intron 45.0%
TCCTAAATGCAACCTGCAAG+AGG - chr1_1:1648973-1648992 None:intergenic 45.0%
CCCCGCTTTGACAATATCTA+AGG + chr1_1:1649063-1649082 Msa0000490:CDS 45.0%
!!! GTGTGTTTTGGTAGTGAGTC+TGG + chr1_1:1649200-1649219 Msa0000490:intron 45.0%
GGTAGTGAGTCTGGTAACTT+TGG + chr1_1:1649209-1649228 Msa0000490:intron 45.0%
GTCCAACTTCAGGATTGTGA+AGG - chr1_1:1649483-1649502 None:intergenic 45.0%
GAATGACACACTAAGGGGAA+CGG - chr1_1:1649789-1649808 None:intergenic 45.0%
GTTTCTTAAGTGGGTGGGAA+AGG + chr1_1:1649865-1649884 Msa0000490:intron 45.0%
ATCCGTCAACAGGGAACAAA+TGG - chr1_1:1649921-1649940 None:intergenic 45.0%
ACTAAGGGATCATCTGGGTT+TGG - chr1_1:1649944-1649963 None:intergenic 45.0%
CCAAGTATGAAACCACTGCT+CGG + chr1_1:1649999-1650018 Msa0000490:CDS 45.0%
! CTGGACTCAGAAGTATGCAA+TGG + chr1_1:1650024-1650043 Msa0000490:CDS 45.0%
!! CAATGGGCTAGCAAGAATGT+TGG + chr1_1:1650041-1650060 Msa0000490:exon 45.0%
!!! ATTCAAATTAAATTTTAAAA+AGG + chr1_1:1649703-1649722 Msa0000490:intron 5.0%
GAAGGTCCTTGAGTTCCTTG+AGG - chr1_1:1647417-1647436 None:intergenic 50.0%
CTTCAAACACCCCTCATCCT+TGG + chr1_1:1647501-1647520 Msa0000490:intron 50.0%
AACCTCCTCTATTTCCTGGC+TGG + chr1_1:1648848-1648867 Msa0000490:intron 50.0%
TTCCAGCCAGGAAATAGAGG+AGG - chr1_1:1648853-1648872 None:intergenic 50.0%
GGGTGGGAAAGGTTTGTGTT+TGG + chr1_1:1649876-1649895 Msa0000490:intron 50.0%
TGGGTTTGGATCCGTCAACA+GGG - chr1_1:1649930-1649949 None:intergenic 50.0%
CAGGCACTAAGGGATCATCT+GGG - chr1_1:1649949-1649968 None:intergenic 50.0%
TCAGGCACTAAGGGATCATC+TGG - chr1_1:1649950-1649969 None:intergenic 50.0%
CCGAGCAGTGGTTTCATACT+TGG - chr1_1:1650002-1650021 None:intergenic 50.0%
AAATACCCTACCGGAGCTTC+CGG + chr1_1:1650108-1650127 Msa0000490:three_prime_UTR 50.0%
CAGAATCTTACCGGAAGCTC+CGG - chr1_1:1650121-1650140 None:intergenic 50.0%
CCAATTCCATGGCCTCCAAG+CGG + chr1_1:1647389-1647408 Msa0000490:CDS 55.0%
TTCCTTGAGGATCCGCTTGG+AGG - chr1_1:1647404-1647423 None:intergenic 55.0%
GAGTTCCTTGAGGATCCGCT+TGG - chr1_1:1647407-1647426 None:intergenic 55.0%
GCGGATCCTCAAGGAACTCA+AGG + chr1_1:1647408-1647427 Msa0000490:CDS 55.0%
TTACCAGCGCTGCAAGAGGT+TGG - chr1_1:1647451-1647470 None:intergenic 55.0%
TACAGGGCCTGTGAAGGTAG+TGG - chr1_1:1648620-1648639 None:intergenic 55.0%
TTCTGCTACAGGGCCTGTGA+AGG - chr1_1:1648626-1648645 None:intergenic 55.0%
TCCTCCGGCATAAGGGCTAT+CGG - chr1_1:1648685-1648704 None:intergenic 55.0%
CTGGGTTTGGATCCGTCAAC+AGG - chr1_1:1649931-1649950 None:intergenic 55.0%
ATGAAACCACTGCTCGGAGC+TGG + chr1_1:1650005-1650024 Msa0000490:CDS 55.0%
TCTTACCGGAAGCTCCGGTA+GGG - chr1_1:1650116-1650135 None:intergenic 55.0%
ATCTTACCGGAAGCTCCGGT+AGG - chr1_1:1650117-1650136 None:intergenic 55.0%
CCGCTTGGAGGCCATGGAAT+TGG - chr1_1:1647392-1647411 None:intergenic 60.0%
TCCCCCGATAGCCCTTATGC+CGG + chr1_1:1648678-1648697 Msa0000490:CDS 60.0%
TCCGGCATAAGGGCTATCGG+GGG - chr1_1:1648682-1648701 None:intergenic 60.0%
CTCCGGCATAAGGGCTATCG+GGG - chr1_1:1648683-1648702 None:intergenic 60.0%
CCTCCGGCATAAGGGCTATC+GGG - chr1_1:1648684-1648703 None:intergenic 60.0%
GAGGATCCGCTTGGAGGCCA+TGG - chr1_1:1647398-1647417 None:intergenic 65.0%
GGCCTCCAAGCGGATCCTCA+AGG + chr1_1:1647399-1647418 Msa0000490:CDS 65.0%
CCAGCGCTGCAAGAGGTTGG+AGG - chr1_1:1647448-1647467 None:intergenic 65.0%
CCTCCAACCTCTTGCAGCGC+TGG + chr1_1:1647445-1647464 Msa0000490:CDS 65.0%
CCCGATAGCCCTTATGCCGG+AGG + chr1_1:1648681-1648700 Msa0000490:CDS 65.0%
CTGAGTCCAGCTCCGAGCAG+TGG - chr1_1:1650014-1650033 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 1646958 1650416 1646958 ID=Msa0000490;Name=Msa0000490
chr1_1 mRNA 1646958 1650416 1646958 ID=Msa0000490-mRNA-1;Parent=Msa0000490;Name=Msa0000490-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|0.75|0.6|0.8|0.75|0.8|5|365|160
chr1_1 exon 1646958 1646962 1646958 ID=Msa0000490-mRNA-1:exon:223;Parent=Msa0000490-mRNA-1
chr1_1 exon 1647365 1647466 1647365 ID=Msa0000490-mRNA-1:exon:224;Parent=Msa0000490-mRNA-1
chr1_1 exon 1648632 1648758 1648632 ID=Msa0000490-mRNA-1:exon:225;Parent=Msa0000490-mRNA-1
chr1_1 exon 1648980 1649084 1648980 ID=Msa0000490-mRNA-1:exon:226;Parent=Msa0000490-mRNA-1
chr1_1 exon 1649908 1650416 1649908 ID=Msa0000490-mRNA-1:exon:227;Parent=Msa0000490-mRNA-1
chr1_1 CDS 1646958 1646962 1646958 ID=Msa0000490-mRNA-1:cds;Parent=Msa0000490-mRNA-1
chr1_1 CDS 1647365 1647466 1647365 ID=Msa0000490-mRNA-1:cds;Parent=Msa0000490-mRNA-1
chr1_1 CDS 1648632 1648758 1648632 ID=Msa0000490-mRNA-1:cds;Parent=Msa0000490-mRNA-1
chr1_1 CDS 1648980 1649084 1648980 ID=Msa0000490-mRNA-1:cds;Parent=Msa0000490-mRNA-1
chr1_1 CDS 1649908 1650051 1649908 ID=Msa0000490-mRNA-1:cds;Parent=Msa0000490-mRNA-1
chr1_1 three_prime_UTR 1650052 1650416 1650052 ID=Msa0000490-mRNA-1:three_prime_utr;Parent=Msa0000490-mRNA-1
Gene Sequence

>Msa0000490

ATGACATCGAAAACTTCGAAAGGGAAATTCCAATTCCATGGCCTCCAAGCGGATCCTCAAGGAACTCAAGGACCTTCAGAAAGATCCTCCAACCTCTTGCAGCGCTGGCCCTGTAGCAGAAGACATGTTTCATTGGCAAGCAACTATAATGGGTCCCCCGATAGCCCTTATGCCGGAGGAGTTTTTCTAGTTACCATTCATTTTCCTCCTGATTATCCATTCAAGCCACCCAAGGTTGCATTTAGGACCAAAGTTTTCCACCCAAATATCAACAGCAATGGTAGCATTTGTCTTGATATCTTGAAGGAGCAGTGGAGCCCCGCTTTGACAATATCTAAGGTGCTGTTATCCATTTGTTCCCTGTTGACGGATCCAAACCCAGATGATCCCTTAGTGCCTGAAATAGCTCATATGTACAAGACAGACAGGTCCAAGTATGAAACCACTGCTCGGAGCTGGACTCAGAAGTATGCAATGGGCTAG
Protein sequence

>Msa0000490

MTSKTSKGKFQFHGLQADPQGTQGPSERSSNLLQRWPCSRRHVSLASNYNGSPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAMG*