Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1423890 | A0A072TLA6 | 80.481 | 1081 | 119 | 8 | 13 | 1065 | 1 | 1017 | 0.0 | 1699 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0506440 | Msa1423890 | 0.829702 | 4.440063e-55 | -8.615850e-47 |
| Msa0506480 | Msa1423890 | 0.813153 | 2.956485e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1423890 | MtrunA17_Chr8g0341551 | 88.588 | 850 | 84 | 2 | 227 | 1065 | 1 | 848 | 0.0 | 1519 |
| Msa1423890 | MtrunA17_Chr8g0341581 | 76.490 | 604 | 121 | 3 | 482 | 1065 | 333 | 935 | 0.0 | 909 |
| Msa1423890 | MtrunA17_Chr8g0341581 | 59.429 | 175 | 49 | 5 | 336 | 489 | 1 | 174 | 1.07e-44 | 175 |
| Msa1423890 | MtrunA17_Chr8g0341541 | 52.249 | 289 | 44 | 6 | 13 | 235 | 1 | 261 | 7.93e-63 | 226 |
| Msa1423890 | MtrunA17_Chr8g0341571 | 88.750 | 80 | 9 | 0 | 13 | 92 | 1 | 80 | 1.28e-41 | 147 |
| Msa1423890 | MtrunA17_Chr8g0341561 | 69.444 | 108 | 17 | 2 | 108 | 215 | 1 | 92 | 2.97e-36 | 132 |
| Msa1423890 | MtrunA17_Chr8g0341591 | 62.500 | 80 | 28 | 1 | 225 | 302 | 154 | 233 | 2.87e-18 | 85.5 |
| Msa1423890 | MtrunA17_Chr1g0154531 | 67.568 | 74 | 21 | 1 | 482 | 552 | 247 | 320 | 8.61e-18 | 85.9 |
| Msa1423890 | MtrunA17_Chr1g0154551 | 60.000 | 55 | 20 | 1 | 13 | 67 | 1 | 53 | 2.14e-13 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1423890 | AT3G21290.1 | 30.731 | 602 | 334 | 20 | 484 | 1063 | 649 | 1189 | 1.35e-47 | 186 |
| Msa1423890 | AT3G21290.1 | 31.667 | 240 | 129 | 7 | 225 | 435 | 180 | 413 | 1.49e-16 | 85.9 |
| Msa1423890 | AT3G21290.2 | 30.782 | 601 | 333 | 20 | 485 | 1063 | 461 | 1000 | 1.58e-47 | 185 |
| Msa1423890 | AT3G21290.2 | 31.304 | 230 | 123 | 7 | 235 | 435 | 1 | 224 | 1.01e-13 | 76.6 |
| Msa1423890 | AT1G51720.4 | 41.176 | 289 | 76 | 6 | 13 | 235 | 1 | 261 | 8.46e-45 | 170 |
| Msa1423890 | AT1G51720.2 | 41.176 | 289 | 76 | 6 | 13 | 235 | 1 | 261 | 2.82e-44 | 170 |
| Msa1423890 | AT1G51720.1 | 41.176 | 289 | 76 | 6 | 13 | 235 | 1 | 261 | 6.05e-44 | 170 |
| Msa1423890 | AT1G51720.3 | 41.176 | 289 | 76 | 6 | 13 | 235 | 1 | 261 | 6.05e-44 | 170 |
Find 246 sgRNAs with CRISPR-Local
Find 559 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACAAGCCTGTTTATGTAAA+AGG | 0.155971 | tig0025581:-66101 | Msa1423890:intron |
| GTTAAATCCTCCACTGTTAA+TGG | 0.178531 | tig0025581:-60348 | Msa1423890:CDS |
| TTACATTTATTAGATGTATT+TGG | 0.193983 | tig0025581:-58821 | Msa1423890:three_prime_UTR |
| ATTTATCCGGAATTTGAAAA+AGG | 0.195954 | tig0025581:+58725 | None:intergenic |
| ACGGCATTGCAACACAAATT+AGG | 0.198017 | tig0025581:-59274 | Msa1423890:CDS |
| ATGCCTGACTGTATCCTTTC+TGG | 0.207056 | tig0025581:+60772 | None:intergenic |
| AGGATAACTCTTTCTTCTTT+TGG | 0.207067 | tig0025581:+59749 | None:intergenic |
| TCAATACCACGGCTCATTTC+TGG | 0.212870 | tig0025581:+59949 | None:intergenic |
| CTCAATCTCTGTCTTTGTTA+TGG | 0.244914 | tig0025581:-65393 | Msa1423890:CDS |
| TTGAAAACAACTTTGGATTC+TGG | 0.250712 | tig0025581:-60144 | Msa1423890:CDS |
| AATGGGCAGATACTTATAAA+TGG | 0.255985 | tig0025581:-66325 | Msa1423890:CDS |
| TTGACATCAATCCAAATCTA+TGG | 0.263751 | tig0025581:+62069 | None:intergenic |
| TTCTTGAAGCTACACTAAAA+AGG | 0.266324 | tig0025581:-65054 | Msa1423890:CDS |
| GTCATTTGGAACTTCCTCTT+TGG | 0.270270 | tig0025581:+61199 | None:intergenic |
| AAGCTTTCTGAATCCACTTC+TGG | 0.273625 | tig0025581:+61519 | None:intergenic |
| GTTATAGGTCCCTTTAATTC+AGG | 0.275218 | tig0025581:+59682 | None:intergenic |
| AAAGGAGGAACCTGAATTAA+AGG | 0.288377 | tig0025581:-59692 | Msa1423890:CDS |
| AGAGCTTTCAGACTTGGATT+TGG | 0.288726 | tig0025581:-60304 | Msa1423890:CDS |
| AAGGAAGAATTACGATAAAA+TGG | 0.290031 | tig0025581:-62286 | Msa1423890:CDS |
| GGCTTTAAAATATACCTTCC+AGG | 0.292024 | tig0025581:+61540 | None:intergenic |
| AACATTCTCTGCAAATCTAT+TGG | 0.292811 | tig0025581:+61882 | None:intergenic |
| GAAGGAGCGCAAAAGTTATA+TGG | 0.297964 | tig0025581:-61075 | Msa1423890:CDS |
| TGAAATGGTTGGTAAGTTAA+AGG | 0.299635 | tig0025581:-60436 | Msa1423890:CDS |
| CTTTGCAACAATGGTTTCTT+CGG | 0.310288 | tig0025581:+60260 | None:intergenic |
| GTTGGAGGCTCCCATAGATT+TGG | 0.313915 | tig0025581:-62080 | Msa1423890:CDS |
| GGTACAGATGTGAAAATGTT+TGG | 0.314198 | tig0025581:-60876 | Msa1423890:CDS |
| CTCTTCATGGACGGGTTCCC+AGG | 0.320343 | tig0025581:+62503 | None:intergenic |
| AAATGGTTCGTTTAAACATA+TGG | 0.333032 | tig0025581:-60226 | Msa1423890:CDS |
| GAGCTTTCAGACTTGGATTT+GGG | 0.337923 | tig0025581:-60303 | Msa1423890:CDS |
| ACTACCATCCCTGGAATTCC+TGG | 0.338472 | tig0025581:+60512 | None:intergenic |
| GTATTTGCAAATAGAAATAA+TGG | 0.339653 | tig0025581:-59775 | Msa1423890:CDS |
| ATTTGCAGGCACTCTTCTAT+TGG | 0.343063 | tig0025581:+59906 | None:intergenic |
| ACAGGTGAAAAGGAAGAAAA+TGG | 0.344196 | tig0025581:-66369 | Msa1423890:CDS |
| TGCCTTTATCTGGCTCTTCA+TGG | 0.345411 | tig0025581:+62490 | None:intergenic |
| TCTTATGTTTACCTTTAGAT+AGG | 0.350397 | tig0025581:+60988 | None:intergenic |
| GTTTCCTCCAAATCGTCATT+TGG | 0.357367 | tig0025581:+61185 | None:intergenic |
| GACGACATTGTCTTAGATAA+TGG | 0.357850 | tig0025581:-66473 | Msa1423890:CDS |
| AAGGGTTTCCTAGAGGTCTT+TGG | 0.361231 | tig0025581:+60697 | None:intergenic |
| GGCCTCCCAAGACGAAATTA+TGG | 0.363858 | tig0025581:-66132 | Msa1423890:CDS |
| TTAAATCCTCCACTGTTAAT+GGG | 0.365396 | tig0025581:-60347 | Msa1423890:CDS |
| CGGCATTGCAACACAAATTA+GGG | 0.367284 | tig0025581:-59273 | Msa1423890:CDS |
| ACCTTTATTGAAAACAACTT+TGG | 0.367488 | tig0025581:-60151 | Msa1423890:CDS |
| TCTTGCTTAGATCTATTTGC+AGG | 0.374707 | tig0025581:+59892 | None:intergenic |
| GCAAAGCAATTTGAACGAAA+TGG | 0.377485 | tig0025581:-60243 | Msa1423890:CDS |
| TTCCTTCAAAATCTTGTGTA+AGG | 0.384924 | tig0025581:+59470 | None:intergenic |
| AACTATTATTGTATTCTTCA+AGG | 0.385481 | tig0025581:+66186 | None:intergenic |
| TCTTAATCTTGACTTCTTTG+AGG | 0.385510 | tig0025581:-65366 | Msa1423890:CDS |
| TCGGGCCATAATTTCGTCTT+GGG | 0.387732 | tig0025581:+66127 | None:intergenic |
| GGCACCTCTTCACATGAATT+AGG | 0.390383 | tig0025581:+59817 | None:intergenic |
| ACAAGGTACGCAGTCACATT+TGG | 0.393123 | tig0025581:-60406 | Msa1423890:CDS |
| GGAAGTTCCAAATGACGATT+TGG | 0.394070 | tig0025581:-61192 | Msa1423890:CDS |
| CAGCTGCCAATGCCTTTATC+TGG | 0.394114 | tig0025581:+62480 | None:intergenic |
| TGTATCTTACTTTCTTTCAC+AGG | 0.395304 | tig0025581:+59844 | None:intergenic |
| GAATGTTAATTTCTCTCCTA+AGG | 0.396626 | tig0025581:-61866 | Msa1423890:CDS |
| AATGGAAGAGGCTGGACTTA+AGG | 0.399312 | tig0025581:-62268 | Msa1423890:CDS |
| CCAACCTTGGTATTAAGTTC+AGG | 0.399713 | tig0025581:-60117 | Msa1423890:CDS |
| AATGAGCCGTGGTATTGATT+TGG | 0.399752 | tig0025581:-59944 | Msa1423890:CDS |
| AGAGCCATTGACTTGGAGCC+TGG | 0.402129 | tig0025581:-62521 | Msa1423890:CDS |
| GGAGAGGACGATCCTTCATT+TGG | 0.406683 | tig0025581:-66446 | Msa1423890:CDS |
| GGGGAGTTTGTTTGATGAAA+GGG | 0.408856 | tig0025581:-61054 | Msa1423890:CDS |
| GTCCATGAAGAGCCAGATAA+AGG | 0.409848 | tig0025581:-62492 | Msa1423890:CDS |
| GTATTGATTTGGATGGTTGC+AGG | 0.410847 | tig0025581:-59933 | Msa1423890:CDS |
| TTCCTTTGCTTGCCCTGGTA+GGG | 0.412398 | tig0025581:+61919 | None:intergenic |
| GTTTGATTCTTCTTTCACTT+TGG | 0.412549 | tig0025581:+61148 | None:intergenic |
| GAGTGACTTGAACTTGGGTT+TGG | 0.414431 | tig0025581:+63989 | None:intergenic |
| TAATAGTTTGCTTCATAAAG+AGG | 0.415011 | tig0025581:-66171 | Msa1423890:CDS |
| GTCGGGCCATAATTTCGTCT+TGG | 0.415176 | tig0025581:+66126 | None:intergenic |
| TCATGCGGTCGAGTTCATTC+AGG | 0.415859 | tig0025581:-65026 | Msa1423890:CDS |
| GGATACAGTCAGGCATTGTC+TGG | 0.418533 | tig0025581:-60765 | Msa1423890:CDS |
| TTCAAATTGCTTTGCAACAA+TGG | 0.421556 | tig0025581:+60251 | None:intergenic |
| AGGGCAAGCAAAGGAAATAA+TGG | 0.422038 | tig0025581:-61912 | Msa1423890:CDS |
| TGGTCGAAGAACGAGATCTA+TGG | 0.427758 | tig0025581:-64054 | Msa1423890:CDS |
| GTGAAAGCACAAGGCACAAC+AGG | 0.430221 | tig0025581:-60644 | Msa1423890:CDS |
| TTCCGTTAGGGTTACCCCTT+AGG | 0.430281 | tig0025581:+61850 | None:intergenic |
| TATCTAAAGGTAAACATAAG+AGG | 0.431160 | tig0025581:-60986 | Msa1423890:CDS |
| CATAAACAGGCTTGTCTTGT+CGG | 0.432519 | tig0025581:+66108 | None:intergenic |
| TTTGCAACAATGGTTTCTTC+GGG | 0.433287 | tig0025581:+60261 | None:intergenic |
| ACCGAATCCTTTCTTCCATC+AGG | 0.434761 | tig0025581:+59796 | None:intergenic |
| TAAGAGAGAGCTTTCAGACT+TGG | 0.434843 | tig0025581:-60310 | Msa1423890:CDS |
| AGAATATGTGCAGGATTACC+AGG | 0.435254 | tig0025581:-59514 | Msa1423890:CDS |
| GTACAGATGTGAAAATGTTT+GGG | 0.435714 | tig0025581:-60875 | Msa1423890:CDS |
| CTCATACTCAACAGGTGAAA+AGG | 0.436078 | tig0025581:-66379 | Msa1423890:CDS |
| TTTCCTTTGCTTGCCCTGGT+AGG | 0.437033 | tig0025581:+61918 | None:intergenic |
| TTTATCTGGCTCTTCATGGA+CGG | 0.439452 | tig0025581:+62494 | None:intergenic |
| CCGTGAAGAACGTTTGCCCT+TGG | 0.441672 | tig0025581:+62034 | None:intergenic |
| CTCTTATTCAAAGTTTGAAA+AGG | 0.443955 | tig0025581:-59710 | Msa1423890:CDS |
| ATAAACAGGCTTGTCTTGTC+GGG | 0.447856 | tig0025581:+66109 | None:intergenic |
| ATACTTGAGTGACTTGAACT+TGG | 0.451714 | tig0025581:+63983 | None:intergenic |
| AGATTTGTCTCATACTCAAC+AGG | 0.452612 | tig0025581:-66387 | Msa1423890:CDS |
| ACCTCAAAAGTCATTCCGTT+AGG | 0.455562 | tig0025581:+61837 | None:intergenic |
| CGAGTTCATTCAGGCAATCC+AGG | 0.456450 | tig0025581:-65017 | Msa1423890:CDS |
| AAGGAGCGCAAAAGTTATAT+GGG | 0.456627 | tig0025581:-61074 | Msa1423890:CDS |
| TTACTTTCTTTCACAGGGTA+GGG | 0.458346 | tig0025581:+59850 | None:intergenic |
| CAATGGTTGGCAGCAACATT+CGG | 0.462412 | tig0025581:+66579 | None:intergenic |
| CAAGAGCTTGAACTACCTCC+TGG | 0.464257 | tig0025581:+64999 | None:intergenic |
| TGCAATCGTGGTTTCCAGAA+AGG | 0.466804 | tig0025581:-60786 | Msa1423890:CDS |
| TATTGTGCTTCATGAAGAAC+TGG | 0.468321 | tig0025581:-59034 | Msa1423890:CDS |
| AATGTGACTGCGTACCTTGT+CGG | 0.468490 | tig0025581:+60409 | None:intergenic |
| TTATCTGGCTCTTCATGGAC+GGG | 0.469150 | tig0025581:+62495 | None:intergenic |
| TACTTGAGTGACTTGAACTT+GGG | 0.469453 | tig0025581:+63984 | None:intergenic |
| CACAAATTAGGGAATCCTAT+AGG | 0.471035 | tig0025581:-59262 | Msa1423890:CDS |
| TACCGATCCGCATTGCCTAT+AGG | 0.473587 | tig0025581:+59247 | None:intergenic |
| ACAATTTCTTCACCAAATGA+AGG | 0.476033 | tig0025581:+66434 | None:intergenic |
| CGAATGTTGCTGCCAACCAT+TGG | 0.479378 | tig0025581:-66578 | Msa1423890:CDS |
| ATTATTTCCTTTGCTTGCCC+TGG | 0.482147 | tig0025581:+61914 | None:intergenic |
| TTGTACTACATCAGCTCCAC+AGG | 0.483865 | tig0025581:-61231 | Msa1423890:CDS |
| GTCAATAAGTGCTACTGCCA+AGG | 0.484243 | tig0025581:-62051 | Msa1423890:CDS |
| AAAACAATACAACATTTATC+CGG | 0.484770 | tig0025581:+58712 | None:intergenic |
| GTGATGGCACAACATCATAA+AGG | 0.486404 | tig0025581:+61988 | None:intergenic |
| TGGGGAGTTTGTTTGATGAA+AGG | 0.488167 | tig0025581:-61055 | Msa1423890:CDS |
| GAGTCTTCAGTAAGTTCAAA+TGG | 0.488966 | tig0025581:+60834 | None:intergenic |
| AAGGAGGAACCTGAATTAAA+GGG | 0.489126 | tig0025581:-59691 | Msa1423890:CDS |
| AGGAAACCCTTCCTATCCAT+TGG | 0.492029 | tig0025581:-60685 | Msa1423890:CDS |
| AACAATGGTTTCTTCGGGAG+TGG | 0.492458 | tig0025581:+60266 | None:intergenic |
| CACTTGGTTGTGAACGAGAT+TGG | 0.492671 | tig0025581:-66497 | Msa1423890:CDS |
| AAAGTCTCTGATCCTTTGCT+TGG | 0.492695 | tig0025581:+58882 | None:intergenic |
| GCCTGATGGAAGAAAGGATT+CGG | 0.492807 | tig0025581:-59797 | Msa1423890:CDS |
| TTCAAGAAACCTACTGAAAG+TGG | 0.492887 | tig0025581:-61498 | Msa1423890:CDS |
| ATGGGCAGATACTTATAAAT+GGG | 0.495944 | tig0025581:-66324 | Msa1423890:CDS |
| TCCTCCACTGTTAATGGGCG+AGG | 0.503211 | tig0025581:-60342 | Msa1423890:CDS |
| CTCAGGGATAACAACAGAAC+TGG | 0.503518 | tig0025581:-60375 | Msa1423890:CDS |
| TTTGTGTTGTCCAAAATGCT+AGG | 0.504612 | tig0025581:+60090 | None:intergenic |
| CAACAGGAAACACACAGGAC+AGG | 0.508670 | tig0025581:-60628 | Msa1423890:CDS |
| CCTCAAAAGTCATTCCGTTA+GGG | 0.508736 | tig0025581:+61838 | None:intergenic |
| AATGTTAATTTCTCTCCTAA+GGG | 0.509109 | tig0025581:-61865 | Msa1423890:CDS |
| TACGATAAAATGGAAGAGGC+TGG | 0.509401 | tig0025581:-62276 | Msa1423890:CDS |
| AATGAAGGATCGTCCTCTCC+AGG | 0.510240 | tig0025581:+66449 | None:intergenic |
| ATCTAAAGGTAAACATAAGA+GGG | 0.510952 | tig0025581:-60985 | Msa1423890:CDS |
| CTACCATCCCTGGAATTCCT+GGG | 0.511362 | tig0025581:+60513 | None:intergenic |
| GCTTTAAAATATACCTTCCA+GGG | 0.513152 | tig0025581:+61541 | None:intergenic |
| AGGGTTGAGTTTCAGAAACT+AGG | 0.515836 | tig0025581:-59344 | Msa1423890:CDS |
| CCAAGGGCAAACGTTCTTCA+CGG | 0.516971 | tig0025581:-62034 | Msa1423890:CDS |
| CACACATCCAAGTTTCATAC+AGG | 0.519016 | tig0025581:-61680 | Msa1423890:CDS |
| TGCTTGTCTGTCATTCGTGA+TGG | 0.519371 | tig0025581:+61972 | None:intergenic |
| ACTATTATTGTATTCTTCAA+GGG | 0.520487 | tig0025581:+66187 | None:intergenic |
| TAAAAGACGGAGAGAGGAAT+GGG | 0.521660 | tig0025581:-66342 | Msa1423890:CDS |
| AGAGGCTCTTCGTCTTCAAT+CGG | 0.522456 | tig0025581:-66153 | Msa1423890:CDS |
| TTGCTGCCAACCATTGGAGT+AGG | 0.526190 | tig0025581:-66572 | Msa1423890:CDS |
| GTTCCCAGGCTCCAAGTCAA+TGG | 0.531249 | tig0025581:+62517 | None:intergenic |
| TTACGATAGAGCCATTGACT+TGG | 0.534203 | tig0025581:-62528 | Msa1423890:intron |
| CTTACTTTCTTTCACAGGGT+AGG | 0.535379 | tig0025581:+59849 | None:intergenic |
| TTATTCAAAGTTTGAAAAGG+AGG | 0.536538 | tig0025581:-59707 | Msa1423890:CDS |
| CCTGAACTTAATACCAAGGT+TGG | 0.539546 | tig0025581:+60117 | None:intergenic |
| GACTTCTTTGAGGTTCCACA+AGG | 0.540563 | tig0025581:-65356 | Msa1423890:intron |
| AAGGCATTGGCAGCTGATGA+AGG | 0.543539 | tig0025581:-62473 | Msa1423890:intron |
| AGAGGTGCCTGATGGAAGAA+AGG | 0.543673 | tig0025581:-59803 | Msa1423890:CDS |
| TCAAGATCCTGTATGAAACT+TGG | 0.544273 | tig0025581:+61673 | None:intergenic |
| GCAAGATACAAAACATGGAA+TGG | 0.545271 | tig0025581:-59875 | Msa1423890:CDS |
| TTAGAGAATGCTAAAAGCAA+GGG | 0.546685 | tig0025581:-59314 | Msa1423890:CDS |
| GTGAAGTCACGGATAGCTCT+AGG | 0.549205 | tig0025581:-61028 | Msa1423890:CDS |
| ATCCTATAGGCAATGCGGAT+CGG | 0.549244 | tig0025581:-59249 | Msa1423890:intron |
| CAGATTGCAAAATATATCCC+TGG | 0.549346 | tig0025581:-61558 | Msa1423890:CDS |
| AAAGCAGACAGCGCGAACGT+TGG | 0.549641 | tig0025581:-59988 | Msa1423890:CDS |
| CTCCTAAGGGGTAACCCTAA+CGG | 0.555054 | tig0025581:-61852 | Msa1423890:CDS |
| ACTCGTGAATCATATTCTCC+AGG | 0.556461 | tig0025581:-60897 | Msa1423890:CDS |
| GGATTCTGGAAGGCCAACCT+TGG | 0.559635 | tig0025581:-60130 | Msa1423890:CDS |
| ATCATCCCTACTCCAATGGT+TGG | 0.560312 | tig0025581:+66566 | None:intergenic |
| GAAGAGCCAGATAAAGGCAT+TGG | 0.560331 | tig0025581:-62486 | Msa1423890:CDS |
| AGTTCCAAATGACGATTTGG+AGG | 0.560361 | tig0025581:-61189 | Msa1423890:CDS |
| TGACATCAATCCAAATCTAT+GGG | 0.560951 | tig0025581:+62070 | None:intergenic |
| GGCTGTTAAAAGACGGAGAG+AGG | 0.562084 | tig0025581:-66348 | Msa1423890:CDS |
| AACACCTAATTCATGTGAAG+AGG | 0.563577 | tig0025581:-59821 | Msa1423890:CDS |
| AGGGAAGTGGAAACTCTTCA+AGG | 0.563795 | tig0025581:-62243 | Msa1423890:intron |
| GAGCCATTGACTTGGAGCCT+GGG | 0.564055 | tig0025581:-62520 | Msa1423890:CDS |
| TTTAGAGAATGCTAAAAGCA+AGG | 0.564095 | tig0025581:-59315 | Msa1423890:CDS |
| GGCCATAATTTCGTCTTGGG+AGG | 0.564695 | tig0025581:+66130 | None:intergenic |
| CAAAAGAAACTTCATGTGTA+CGG | 0.567423 | tig0025581:+60601 | None:intergenic |
| TTGAGAAAGAAATCCCTACC+AGG | 0.568222 | tig0025581:-61932 | Msa1423890:CDS |
| CAGTCTGATAGCCTATCTAA+AGG | 0.569155 | tig0025581:-60999 | Msa1423890:CDS |
| TAGATACAAAGAATATGTGC+AGG | 0.572279 | tig0025581:-59523 | Msa1423890:CDS |
| GCAAGCACATAGGCATCACT+TGG | 0.572850 | tig0025581:-66513 | Msa1423890:CDS |
| ACATCAGCTCCACAGGGAAG+AGG | 0.573845 | tig0025581:-61224 | Msa1423890:CDS |
| GTCACTGACTACTTTCTCCA+AGG | 0.574553 | tig0025581:+61702 | None:intergenic |
| GAATTACGATAAAATGGAAG+AGG | 0.574680 | tig0025581:-62280 | Msa1423890:CDS |
| TATTGATTTGGATGGTTGCA+GGG | 0.575522 | tig0025581:-59932 | Msa1423890:CDS |
| AACATTGATGAGAAATCTGA+AGG | 0.576151 | tig0025581:-60948 | Msa1423890:CDS |
| AAACAACTTTGGATTCTGGA+AGG | 0.579277 | tig0025581:-60140 | Msa1423890:CDS |
| TTAAAAGACGGAGAGAGGAA+TGG | 0.579738 | tig0025581:-66343 | Msa1423890:CDS |
| TGGACTTAAGGAAAGGGAAG+TGG | 0.582283 | tig0025581:-62256 | Msa1423890:CDS |
| AGAGGCTGGACTTAAGGAAA+GGG | 0.582567 | tig0025581:-62262 | Msa1423890:CDS |
| GAAAGAAGAATCAAACACAT+TGG | 0.583451 | tig0025581:-61141 | Msa1423890:CDS |
| AAATGTAATTACTTATGCAT+AGG | 0.587387 | tig0025581:-58775 | Msa1423890:three_prime_UTR |
| ATCCCTACCAGGGCAAGCAA+AGG | 0.588238 | tig0025581:-61921 | Msa1423890:CDS |
| TTTCCAGAAAGGATACAGTC+AGG | 0.589711 | tig0025581:-60775 | Msa1423890:CDS |
| AGTAGGGATGATTTCTGCAA+TGG | 0.590120 | tig0025581:-66555 | Msa1423890:CDS |
| TCTTTGGAACCTCTTCCCTG+TGG | 0.592959 | tig0025581:+61215 | None:intergenic |
| GTATCTTACTTTCTTTCACA+GGG | 0.594347 | tig0025581:+59845 | None:intergenic |
| AGGTACCTTCCACTTTCAGT+AGG | 0.595336 | tig0025581:+61489 | None:intergenic |
| ACATGATTATCAACAGCTGA+AGG | 0.598984 | tig0025581:-61093 | Msa1423890:CDS |
| TGAGAAAGAAATCCCTACCA+GGG | 0.599233 | tig0025581:-61931 | Msa1423890:CDS |
| TCAATAAGTGCTACTGCCAA+GGG | 0.601074 | tig0025581:-62050 | Msa1423890:CDS |
| TGAAGGAGTTCAGATTTACA+TGG | 0.601273 | tig0025581:-64074 | Msa1423890:intron |
| TGAAAGGGAAAGTGAAGTCA+CGG | 0.603338 | tig0025581:-61039 | Msa1423890:CDS |
| TTTGAACTTACTGAAGACTC+TGG | 0.604563 | tig0025581:-60831 | Msa1423890:CDS |
| ATTGTCTTAGATAATGGACC+TGG | 0.607953 | tig0025581:-66467 | Msa1423890:CDS |
| AAGTTAAAGGAAGGCCGACA+AGG | 0.609269 | tig0025581:-60423 | Msa1423890:CDS |
| AGCCGTGGTATTGATTTGGA+TGG | 0.609459 | tig0025581:-59940 | Msa1423890:CDS |
| AGCTGCAATGTCACAAACAG+TGG | 0.609625 | tig0025581:-65083 | Msa1423890:CDS |
| GGGGATAAGGATAGATATGA+CGG | 0.609668 | tig0025581:-59293 | Msa1423890:CDS |
| AATCAAAGCAAACACTTCAG+AGG | 0.610844 | tig0025581:-60202 | Msa1423890:CDS |
| AGAAAATGGCTGTTAAAAGA+CGG | 0.615152 | tig0025581:-66355 | Msa1423890:CDS |
| ATTTGATTCAGCAAGCACAT+AGG | 0.615701 | tig0025581:-66523 | Msa1423890:CDS |
| AAAGAAGAAAGAGTTATCCT+CGG | 0.615874 | tig0025581:-59746 | Msa1423890:CDS |
| ACCTCGCCCATTAACAGTGG+AGG | 0.616632 | tig0025581:+60341 | None:intergenic |
| AAGAGGCTGGACTTAAGGAA+AGG | 0.616765 | tig0025581:-62263 | Msa1423890:CDS |
| TCACGTCAAAATGCGGTCAG+AGG | 0.617213 | tig0025581:-64015 | Msa1423890:CDS |
| AGAAATCATCCCTACTCCAA+TGG | 0.619665 | tig0025581:+66562 | None:intergenic |
| TCATGTGAAGAGGTGCCTGA+TGG | 0.623224 | tig0025581:-59811 | Msa1423890:CDS |
| TGCTGCCAACCATTGGAGTA+GGG | 0.624282 | tig0025581:-66571 | Msa1423890:CDS |
| TTGCAAAATATATCCCTGGA+AGG | 0.627342 | tig0025581:-61554 | Msa1423890:CDS |
| TAGAGAATGCTAAAAGCAAG+GGG | 0.628194 | tig0025581:-59313 | Msa1423890:CDS |
| AGACAAAGAAACTGCAATCG+TGG | 0.628447 | tig0025581:-60798 | Msa1423890:CDS |
| ATGGTTGGTAAGTTAAAGGA+AGG | 0.628985 | tig0025581:-60432 | Msa1423890:CDS |
| AGGCACAACAGGAAACACAC+AGG | 0.630047 | tig0025581:-60633 | Msa1423890:CDS |
| TAAGCAGTCACTATTATCAG+TGG | 0.630365 | tig0025581:-60481 | Msa1423890:CDS |
| AGAAACCTACTGAAAGTGGA+AGG | 0.630726 | tig0025581:-61494 | Msa1423890:intron |
| GGTACAAAGAGGTTGAAAGC+AGG | 0.631155 | tig0025581:-60927 | Msa1423890:CDS |
| CTTAGATAATGGACCTGGAG+AGG | 0.632290 | tig0025581:-66462 | Msa1423890:CDS |
| AATTCCAGGGATGGTAGTAA+CGG | 0.633892 | tig0025581:-60507 | Msa1423890:CDS |
| AAAAGTCCCCAGGAATTCCA+GGG | 0.635404 | tig0025581:-60520 | Msa1423890:CDS |
| GTCCCCAGGAATTCCAGGGA+TGG | 0.638703 | tig0025581:-60516 | Msa1423890:CDS |
| GCTGCAATGTCACAAACAGT+GGG | 0.640022 | tig0025581:-65082 | Msa1423890:CDS |
| ATAAACTTGGTGAAAGCACA+AGG | 0.641003 | tig0025581:-60653 | Msa1423890:CDS |
| ATGTTAATTTCTCTCCTAAG+GGG | 0.645736 | tig0025581:-61864 | Msa1423890:CDS |
| ACAAAGACAGAGATTGAGAG+AGG | 0.647286 | tig0025581:+65398 | None:intergenic |
| TCATGCAGAATACCAAGCAA+AGG | 0.649189 | tig0025581:-58894 | Msa1423890:intron |
| TGTAACTCTCGTATTTACCC+TGG | 0.649216 | tig0025581:+59496 | None:intergenic |
| TCTAAGCAAGATACAAAACA+TGG | 0.654002 | tig0025581:-59880 | Msa1423890:CDS |
| AAAACCTGAACTTAATACCA+AGG | 0.655029 | tig0025581:+60113 | None:intergenic |
| GATACCTCGCCCATTAACAG+TGG | 0.656512 | tig0025581:+60338 | None:intergenic |
| TACCATCCCTGGAATTCCTG+GGG | 0.657745 | tig0025581:+60514 | None:intergenic |
| CTAAGAATCACGTCAAAATG+CGG | 0.661132 | tig0025581:-64022 | Msa1423890:CDS |
| AGAAATCTGAAGGTACAAAG+AGG | 0.664818 | tig0025581:-60938 | Msa1423890:CDS |
| ACAGGGAAGAGGTTCCAAAG+AGG | 0.666131 | tig0025581:-61213 | Msa1423890:CDS |
| TCTAAAGGTAAACATAAGAG+GGG | 0.678462 | tig0025581:-60984 | Msa1423890:CDS |
| TGTGCTTCATGAAGAACTGG+TGG | 0.680636 | tig0025581:-59031 | Msa1423890:intron |
| AACCATCCAAATCAATACCA+CGG | 0.681549 | tig0025581:+59938 | None:intergenic |
| GAATATGTGCAGGATTACCA+GGG | 0.688602 | tig0025581:-59513 | Msa1423890:CDS |
| AGGAGCGCAAAAGTTATATG+GGG | 0.703396 | tig0025581:-61073 | Msa1423890:CDS |
| TGTACTACATCAGCTCCACA+GGG | 0.707042 | tig0025581:-61230 | Msa1423890:CDS |
| GGATAGGAAGGGTTTCCTAG+AGG | 0.708535 | tig0025581:+60690 | None:intergenic |
| TCCCTTGTCTAGCTACACCA+AGG | 0.710926 | tig0025581:-62305 | Msa1423890:intron |
| AAATTGCCAGAAATGAGCCG+TGG | 0.712649 | tig0025581:-59955 | Msa1423890:CDS |
| GTTCATTCAGGCAATCCAGG+AGG | 0.724550 | tig0025581:-65014 | Msa1423890:CDS |
| AGGGAATCCTATAGGCAATG+CGG | 0.732333 | tig0025581:-59254 | Msa1423890:CDS |
| AGAGAATGCTAAAAGCAAGG+GGG | 0.757081 | tig0025581:-59312 | Msa1423890:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAGTTAATCTTTATTATTT+TGG | - | tig0025581:59270-59289 | Msa1423890:CDS | 10.0% |
| !!! | TTTAATTTCTTGATTTAAAA+TGG | - | tig0025581:60119-60138 | Msa1423890:CDS | 10.0% |
| !!! | AATTATATCAGTTTTTATAT+TGG | + | tig0025581:60662-60681 | None:intergenic | 10.0% |
| !! | TATAAAAATTTCATACAAAA+AGG | + | tig0025581:61116-61135 | None:intergenic | 10.0% |
| !! | TAATTAATAAGACAAAAAAT+GGG | + | tig0025581:62706-62725 | None:intergenic | 10.0% |
| !! | ATAATTAATAAGACAAAAAA+TGG | + | tig0025581:62707-62726 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTAAGTTTCT+TGG | + | tig0025581:62910-62929 | None:intergenic | 10.0% |
| !! | ATAAAAAAAATATCAGATTA+AGG | + | tig0025581:66283-66302 | None:intergenic | 10.0% |
| !!! | TTTAGATCATTCTATTTTTT+TGG | - | tig0025581:59297-59316 | Msa1423890:CDS | 15.0% |
| !!! | TTTCTTATTAAACATGATTT+TGG | + | tig0025581:60694-60713 | None:intergenic | 15.0% |
| !!! | TAAGTATTTTAATCTAGATT+CGG | + | tig0025581:60931-60950 | None:intergenic | 15.0% |
| !!! | ATTTTTATATGTAGTTTGAA+AGG | - | tig0025581:61127-61146 | Msa1423890:CDS | 15.0% |
| !!! | ATCTGAATATTTTTTTTAGA+TGG | - | tig0025581:61497-61516 | Msa1423890:CDS | 15.0% |
| !!! | ACTTGTATTTATAAATTTTG+AGG | - | tig0025581:61549-61568 | Msa1423890:CDS | 15.0% |
| !!! | CTTGTATTTATAAATTTTGA+GGG | - | tig0025581:61550-61569 | Msa1423890:CDS | 15.0% |
| !! | AAAAAAAAATCAAATATGTG+AGG | + | tig0025581:61697-61716 | None:intergenic | 15.0% |
| !! | AAATTCAAATTTAAAAACTC+AGG | + | tig0025581:62859-62878 | None:intergenic | 15.0% |
| !! | TTACATTTATTAGATGTATT+TGG | - | tig0025581:66445-66464 | Msa1423890:CDS | 15.0% |
| !! | TTTCTTTATGTAAAAACATA+CGG | + | tig0025581:66473-66492 | None:intergenic | 15.0% |
| !! | ACTATTATTGTATTCTTCAA+GGG | + | tig0025581:59082-59101 | None:intergenic | 20.0% |
| !! | AACTATTATTGTATTCTTCA+AGG | + | tig0025581:59083-59102 | None:intergenic | 20.0% |
| !! | AGTTTCATTAACAACATTAA+TGG | - | tig0025581:59238-59257 | Msa1423890:intron | 20.0% |
| !!! | GTGATTTTTAGATAATTCTA+TGG | - | tig0025581:59322-59341 | Msa1423890:CDS | 20.0% |
| !! | TTCTATCAAGAAGATAAATA+AGG | + | tig0025581:60054-60073 | None:intergenic | 20.0% |
| !!! | TTATCTTCTTGATAGAATTT+TGG | - | tig0025581:60057-60076 | Msa1423890:CDS | 20.0% |
| !! | TTAAAATGGTTGTATTCTTT+AGG | - | tig0025581:60133-60152 | Msa1423890:CDS | 20.0% |
| !! | TAAAATGGTTGTATTCTTTA+GGG | - | tig0025581:60134-60153 | Msa1423890:CDS | 20.0% |
| !! | AAAGTAACAAGAATATATTG+AGG | - | tig0025581:60531-60550 | Msa1423890:CDS | 20.0% |
| !! | AAGTAACAAGAATATATTGA+GGG | - | tig0025581:60532-60551 | Msa1423890:CDS | 20.0% |
| !!! | AAGTATTTTAATCTAGATTC+GGG | + | tig0025581:60930-60949 | None:intergenic | 20.0% |
| !! | GTATTGTATTAGTGATATAT+AGG | - | tig0025581:60953-60972 | Msa1423890:CDS | 20.0% |
| !! | TTCTTGTTAATTTATGCATT+TGG | - | tig0025581:61419-61438 | Msa1423890:intron | 20.0% |
| !!! | ATTTTTACGCATGATATATT+TGG | - | tig0025581:61466-61485 | Msa1423890:intron | 20.0% |
| !!! | TTTTTTTAGATGGTAACTAT+TGG | - | tig0025581:61507-61526 | Msa1423890:CDS | 20.0% |
| !!! | GATTTTTTTTTCTTTCTGAA+TGG | - | tig0025581:61706-61725 | Msa1423890:CDS | 20.0% |
| !! | ATTACAAATAATCTAACACA+TGG | + | tig0025581:61985-62004 | None:intergenic | 20.0% |
| !! | GTGTTAGATTATTTGTAATT+AGG | - | tig0025581:61986-62005 | Msa1423890:CDS | 20.0% |
| !! | ATGTTACAATGAAAATATCA+AGG | + | tig0025581:62323-62342 | None:intergenic | 20.0% |
| !! | ATAGTGTTAAAAGTCTAAAT+AGG | - | tig0025581:62590-62609 | Msa1423890:intron | 20.0% |
| !! | ATTAATTGTAAAGTTAGAGA+TGG | + | tig0025581:63506-63525 | None:intergenic | 20.0% |
| !! | ATAAATAGTCTAATATATGC+TGG | - | tig0025581:63973-63992 | Msa1423890:intron | 20.0% |
| !! | TAAATAGTCTAATATATGCT+GGG | - | tig0025581:63974-63993 | Msa1423890:intron | 20.0% |
| !!! | TCTTTAAGAGATTTATTTTC+CGG | + | tig0025581:64693-64712 | None:intergenic | 20.0% |
| !! | GTATTTGCAAATAGAAATAA+TGG | - | tig0025581:65491-65510 | Msa1423890:intron | 20.0% |
| !!! | GTAAAAGTTTCTTTGATTTT+TGG | - | tig0025581:65841-65860 | Msa1423890:intron | 20.0% |
| !! | AAATGTAATTACTTATGCAT+AGG | - | tig0025581:66491-66510 | Msa1423890:CDS | 20.0% |
| !! | AAAACAATACAACATTTATC+CGG | + | tig0025581:66557-66576 | None:intergenic | 20.0% |
| !!! | TAATAGTTTGCTTCATAAAG+AGG | - | tig0025581:59095-59114 | Msa1423890:intron | 25.0% |
| ! | AAGGAAACTAAATTTGCAAA+GGG | + | tig0025581:59368-59387 | None:intergenic | 25.0% |
| !!! | TTCCTTGTATACTTTTTGTA+AGG | - | tig0025581:59382-59401 | Msa1423890:intron | 25.0% |
| !! | TGTGATTTTCTCATTATTTG+CGG | + | tig0025581:59470-59489 | None:intergenic | 25.0% |
| ! | TTCAGTGTAATTATATGTGT+CGG | - | tig0025581:59493-59512 | Msa1423890:CDS | 25.0% |
| !!! | TGCACACTGAAATTTTAAAA+TGG | + | tig0025581:59983-60002 | None:intergenic | 25.0% |
| ! | CTTCAATTATAGAATTTGTC+GGG | + | tig0025581:60165-60184 | None:intergenic | 25.0% |
| ! | GCTTCAATTATAGAATTTGT+CGG | + | tig0025581:60166-60185 | None:intergenic | 25.0% |
| !! | AGTAATATTACTCCTCTTTT+GGG | + | tig0025581:60835-60854 | None:intergenic | 25.0% |
| !! | TAGTAATATTACTCCTCTTT+TGG | + | tig0025581:60836-60855 | None:intergenic | 25.0% |
| !!! | ATATTCTAGATTTTAGTGAG+TGG | - | tig0025581:60870-60889 | Msa1423890:CDS | 25.0% |
| !! | TAAAAAGTTTGTCACGTTTT+TGG | + | tig0025581:61023-61042 | None:intergenic | 25.0% |
| !!! | AGCAAGTTTTAAATTCTTGA+CGG | - | tig0025581:61622-61641 | Msa1423890:intron | 25.0% |
| ! | CTAACATTTGCCATTAAAAA+GGG | + | tig0025581:61854-61873 | None:intergenic | 25.0% |
| ! | ACTAACATTTGCCATTAAAA+AGG | + | tig0025581:61855-61874 | None:intergenic | 25.0% |
| ! | TAAAAGAATTACGGAGTTAA+AGG | + | tig0025581:61930-61949 | None:intergenic | 25.0% |
| ! | GCAAGAGATTAAAAGAATTA+CGG | + | tig0025581:61939-61958 | None:intergenic | 25.0% |
| ! | GCTGTTATTAAATAATCAAG+TGG | + | tig0025581:61961-61980 | None:intergenic | 25.0% |
| !!! | AATGTTGTGTAAACTGATTT+TGG | - | tig0025581:62253-62272 | Msa1423890:CDS | 25.0% |
| !!! | ATGTTGTGTAAACTGATTTT+GGG | - | tig0025581:62254-62273 | Msa1423890:CDS | 25.0% |
| ! | TTCATTGTAACATTTCCTAT+TGG | - | tig0025581:62330-62349 | Msa1423890:intron | 25.0% |
| ! | ACAATGGAAATTAATATCGA+CGG | + | tig0025581:62403-62422 | None:intergenic | 25.0% |
| ! | TCGATATTAATTTCCATTGT+CGG | - | tig0025581:62403-62422 | Msa1423890:intron | 25.0% |
| !!! | TGAACCAAGAAATTTTTTAC+AGG | + | tig0025581:62556-62575 | None:intergenic | 25.0% |
| !!! | TTGTTGTTTTATAGTGTCAT+TGG | - | tig0025581:62883-62902 | Msa1423890:intron | 25.0% |
| !!! | TGTTGTTTTATAGTGTCATT+GGG | - | tig0025581:62884-62903 | Msa1423890:intron | 25.0% |
| !! | ATTTTATCGTAATTCTTCCT+TGG | + | tig0025581:62981-63000 | None:intergenic | 25.0% |
| ! | AAGGAAGAATTACGATAAAA+TGG | - | tig0025581:62980-62999 | Msa1423890:intron | 25.0% |
| ! | CTAACAAAGATTTGTATGAA+GGG | + | tig0025581:63119-63138 | None:intergenic | 25.0% |
| ! | TTCTTTCTCAAAAACAGTAT+TGG | + | tig0025581:63325-63344 | None:intergenic | 25.0% |
| ! | AATGTTAATTTCTCTCCTAA+GGG | - | tig0025581:63401-63420 | Msa1423890:intron | 25.0% |
| ! | AGTAAGAATAACGACATATT+TGG | + | tig0025581:63466-63485 | None:intergenic | 25.0% |
| !!! | TGCTTTCCATTTTTGATTAT+AGG | - | tig0025581:63541-63560 | Msa1423890:intron | 25.0% |
| ! | TCTTATGTTTACCTTTAGAT+AGG | + | tig0025581:64281-64300 | None:intergenic | 25.0% |
| ! | TATCTAAAGGTAAACATAAG+AGG | - | tig0025581:64280-64299 | Msa1423890:intron | 25.0% |
| ! | ATCTAAAGGTAAACATAAGA+GGG | - | tig0025581:64281-64300 | Msa1423890:intron | 25.0% |
| !! | AGTTTATCTGATTTTTCCAA+TGG | + | tig0025581:64600-64619 | None:intergenic | 25.0% |
| ! | TTGGAAAAATCAGATAAACT+TGG | - | tig0025581:64600-64619 | Msa1423890:intron | 25.0% |
| ! | AAATGGTTCGTTTAAACATA+TGG | - | tig0025581:65040-65059 | Msa1423890:CDS | 25.0% |
| ! | ACCTTTATTGAAAACAACTT+TGG | - | tig0025581:65115-65134 | Msa1423890:intron | 25.0% |
| !!! | TCCAAAGTTGTTTTCAATAA+AGG | + | tig0025581:65119-65138 | None:intergenic | 25.0% |
| ! | CTCTTATTCAAAGTTTGAAA+AGG | - | tig0025581:65556-65575 | Msa1423890:intron | 25.0% |
| ! | TTATTCAAAGTTTGAAAAGG+AGG | - | tig0025581:65559-65578 | Msa1423890:intron | 25.0% |
| !!! | TATTTTTGTAGTAGTTAGTG+TGG | - | tig0025581:65651-65670 | Msa1423890:intron | 25.0% |
| !!! | GCATAGGTATGAAATTTTTT+TGG | - | tig0025581:66507-66526 | Msa1423890:CDS | 25.0% |
| ! | TTTATCCGGAATTTGAAAAA+GGG | + | tig0025581:66543-66562 | None:intergenic | 25.0% |
| ! | ATTTATCCGGAATTTGAAAA+AGG | + | tig0025581:66544-66563 | None:intergenic | 25.0% |
| ACAATTTCTTCACCAAATGA+AGG | + | tig0025581:58835-58854 | None:intergenic | 30.0% | |
| AGAAAATGGCTGTTAAAAGA+CGG | - | tig0025581:58911-58930 | Msa1423890:intron | 30.0% | |
| AATGGGCAGATACTTATAAA+TGG | - | tig0025581:58941-58960 | Msa1423890:intron | 30.0% | |
| ATGGGCAGATACTTATAAAT+GGG | - | tig0025581:58942-58961 | Msa1423890:intron | 30.0% | |
| CTTATGTCGATGTGAAAAAA+AGG | - | tig0025581:58965-58984 | Msa1423890:intron | 30.0% | |
| ACAATTACATTCATTGCCTA+AGG | + | tig0025581:59046-59065 | None:intergenic | 30.0% | |
| AGGAAACTAAATTTGCAAAG+GGG | + | tig0025581:59367-59386 | None:intergenic | 30.0% | |
| CAAGGAAACTAAATTTGCAA+AGG | + | tig0025581:59369-59388 | None:intergenic | 30.0% | |
| ! | CTCCTTACAAAAAGTATACA+AGG | + | tig0025581:59387-59406 | None:intergenic | 30.0% |
| ! | TATTCTGTTTACAGTTTGCT+TGG | - | tig0025581:59560-59579 | Msa1423890:intron | 30.0% |
| TCCAACATACTCTCTTTAAT+TGG | - | tig0025581:59623-59642 | Msa1423890:intron | 30.0% | |
| ! | ACCAATTAAAGAGAGTATGT+TGG | + | tig0025581:59627-59646 | None:intergenic | 30.0% |
| GAATCCCACTAAATTTATGT+CGG | - | tig0025581:59659-59678 | Msa1423890:intron | 30.0% | |
| ! | CACTCTTTTCAACTTCAAAT+GGG | + | tig0025581:59705-59724 | None:intergenic | 30.0% |
| ! | ACACTCTTTTCAACTTCAAA+TGG | + | tig0025581:59706-59725 | None:intergenic | 30.0% |
| GCATTAGATATATCATATCG+AGG | + | tig0025581:59797-59816 | None:intergenic | 30.0% | |
| TCTTAATCTTGACTTCTTTG+AGG | - | tig0025581:59900-59919 | Msa1423890:CDS | 30.0% | |
| AGTGTGCATCTTAAAATGTA+AGG | - | tig0025581:59995-60014 | Msa1423890:CDS | 30.0% | |
| TTCTTGAAGCTACACTAAAA+AGG | - | tig0025581:60212-60231 | Msa1423890:CDS | 30.0% | |
| TCTTGAAGCTACACTAAAAA+GGG | - | tig0025581:60213-60232 | Msa1423890:CDS | 30.0% | |
| ! | GTAATATTACTCCTCTTTTG+GGG | + | tig0025581:60834-60853 | None:intergenic | 30.0% |
| AAACTAGGTACATCATTCAT+TGG | + | tig0025581:60991-61010 | None:intergenic | 30.0% | |
| ! | TTTTGGACAACTATCAAACT+AGG | + | tig0025581:61006-61025 | None:intergenic | 30.0% |
| AGAGTGTATGACAATAAGTA+AGG | + | tig0025581:61320-61339 | None:intergenic | 30.0% | |
| ! | TTGAAGACAAGGTTTTCAAA+GGG | + | tig0025581:61369-61388 | None:intergenic | 30.0% |
| ! | AAATTCACAAGTTGAAGACA+AGG | + | tig0025581:61380-61399 | None:intergenic | 30.0% |
| ACTTGCTTGACATTTATACA+TGG | + | tig0025581:61609-61628 | None:intergenic | 30.0% | |
| ! | TCTCTTTTCTATGATCACAA+AGG | - | tig0025581:61661-61680 | Msa1423890:CDS | 30.0% |
| !!! | TTTTTTCTTTCTGAATGGCA+CGG | - | tig0025581:61711-61730 | Msa1423890:intron | 30.0% |
| AACCTCTTGTGTAAAAAAGA+GGG | - | tig0025581:61751-61770 | Msa1423890:intron | 30.0% | |
| TAGTATACACCTATTTGATG+GGG | + | tig0025581:62061-62080 | None:intergenic | 30.0% | |
| CTAGTATACACCTATTTGAT+GGG | + | tig0025581:62062-62081 | None:intergenic | 30.0% | |
| TCAAACAGAATTAGAGACAA+GGG | - | tig0025581:62210-62229 | Msa1423890:intron | 30.0% | |
| GTACAGTAGAGAAGATAAAT+GGG | + | tig0025581:62431-62450 | None:intergenic | 30.0% | |
| AGTACAGTAGAGAAGATAAA+TGG | + | tig0025581:62432-62451 | None:intergenic | 30.0% | |
| TGAAGTTAGTTGTGTGTTAT+TGG | + | tig0025581:62483-62502 | None:intergenic | 30.0% | |
| !!! | GAAATTTTTTACAGGCCAAA+TGG | + | tig0025581:62548-62567 | None:intergenic | 30.0% |
| TTGGCCTGTAAAAAATTTCT+TGG | - | tig0025581:62549-62568 | Msa1423890:intron | 30.0% | |
| GAATTACGATAAAATGGAAG+AGG | - | tig0025581:62986-63005 | Msa1423890:intron | 30.0% | |
| GCTAACAAAGATTTGTATGA+AGG | + | tig0025581:63120-63139 | None:intergenic | 30.0% | |
| TGTAGTTTATATGCAATGTC+TGG | - | tig0025581:63151-63170 | Msa1423890:intron | 30.0% | |
| !!! | GTCTGGAATTTTTTCATAGT+TGG | - | tig0025581:63168-63187 | Msa1423890:intron | 30.0% |
| !!! | TGGAATTTTTTCATAGTTGG+AGG | - | tig0025581:63171-63190 | Msa1423890:intron | 30.0% |
| TGACATCAATCCAAATCTAT+GGG | + | tig0025581:63199-63218 | None:intergenic | 30.0% | |
| TTGACATCAATCCAAATCTA+TGG | + | tig0025581:63200-63219 | None:intergenic | 30.0% | |
| AACATTCTCTGCAAATCTAT+TGG | + | tig0025581:63387-63406 | None:intergenic | 30.0% | |
| GAATGTTAATTTCTCTCCTA+AGG | - | tig0025581:63400-63419 | Msa1423890:intron | 30.0% | |
| ATGTTAATTTCTCTCCTAAG+GGG | - | tig0025581:63402-63421 | Msa1423890:intron | 30.0% | |
| TGTCGTTATTCTTACTTCTT+AGG | - | tig0025581:63470-63489 | Msa1423890:intron | 30.0% | |
| ! | CCACTTACTCTTTTTATAGT+GGG | + | tig0025581:63620-63639 | None:intergenic | 30.0% |
| ! | ACCACTTACTCTTTTTATAG+TGG | + | tig0025581:63621-63640 | None:intergenic | 30.0% |
| ACTATAAAAAGAGTAAGTGG+TGG | - | tig0025581:63620-63639 | Msa1423890:intron | 30.0% | |
| CTATAAAAAGAGTAAGTGGT+GGG | - | tig0025581:63621-63640 | Msa1423890:intron | 30.0% | |
| !! | GCTTTAAAATATACCTTCCA+GGG | + | tig0025581:63728-63747 | None:intergenic | 30.0% |
| !!! | GTATATTTTAAAGCCAGAAG+TGG | - | tig0025581:63734-63753 | Msa1423890:intron | 30.0% |
| TAACGTTAGGTGAAAATAAC+AGG | + | tig0025581:63800-63819 | None:intergenic | 30.0% | |
| ! | TATTATCCACTGATAACGTT+AGG | + | tig0025581:63813-63832 | None:intergenic | 30.0% |
| !! | TTAGTTTGTTACAGTGCTTA+TGG | - | tig0025581:63905-63924 | Msa1423890:intron | 30.0% |
| ATGGATTTCTGTTAAGTGAA+TGG | - | tig0025581:63924-63943 | Msa1423890:intron | 30.0% | |
| GTTTGATTCTTCTTTCACTT+TGG | + | tig0025581:64121-64140 | None:intergenic | 30.0% | |
| GAAAGAAGAATCAAACACAT+TGG | - | tig0025581:64125-64144 | Msa1423890:intron | 30.0% | |
| TCTAAAGGTAAACATAAGAG+GGG | - | tig0025581:64282-64301 | Msa1423890:intron | 30.0% | |
| AACATTGATGAGAAATCTGA+AGG | - | tig0025581:64318-64337 | Msa1423890:intron | 30.0% | |
| GTACAGATGTGAAAATGTTT+GGG | - | tig0025581:64391-64410 | Msa1423890:intron | 30.0% | |
| AGTTCAGATTTACGAAAAAC+AGG | - | tig0025581:64531-64550 | Msa1423890:intron | 30.0% | |
| ATTTACGAAAAACAGGTCAA+AGG | - | tig0025581:64538-64557 | Msa1423890:intron | 30.0% | |
| ! | ATTTTTCCAATGGATAGGAA+GGG | + | tig0025581:64590-64609 | None:intergenic | 30.0% |
| ! | ATCTGATTTTTCCAATGGAT+AGG | + | tig0025581:64595-64614 | None:intergenic | 30.0% |
| CAAAAGAAACTTCATGTGTA+CGG | + | tig0025581:64668-64687 | None:intergenic | 30.0% | |
| TTACCAAAAACACAGTGAAA+TGG | - | tig0025581:64815-64834 | Msa1423890:intron | 30.0% | |
| !! | TGAAATGGTTGGTAAGTTAA+AGG | - | tig0025581:64830-64849 | Msa1423890:intron | 30.0% |
| ACATTTGGAAAAATTGCTCA+GGG | - | tig0025581:64875-64894 | Msa1423890:intron | 30.0% | |
| TTAAATCCTCCACTGTTAAT+GGG | - | tig0025581:64919-64938 | Msa1423890:intron | 30.0% | |
| TTCAAATTGCTTTGCAACAA+TGG | + | tig0025581:65018-65037 | None:intergenic | 30.0% | |
| TTGAAAACAACTTTGGATTC+TGG | - | tig0025581:65122-65141 | Msa1423890:intron | 30.0% | |
| AAAACCTGAACTTAATACCA+AGG | + | tig0025581:65156-65175 | None:intergenic | 30.0% | |
| TCTAAGCAAGATACAAAACA+TGG | - | tig0025581:65386-65405 | Msa1423890:CDS | 30.0% | |
| GTATCTTACTTTCTTTCACA+GGG | + | tig0025581:65424-65443 | None:intergenic | 30.0% | |
| TGTATCTTACTTTCTTTCAC+AGG | + | tig0025581:65425-65444 | None:intergenic | 30.0% | |
| ! | AGGATAACTCTTTCTTCTTT+TGG | + | tig0025581:65520-65539 | None:intergenic | 30.0% |
| AAAGAAGAAAGAGTTATCCT+CGG | - | tig0025581:65520-65539 | Msa1423890:intron | 30.0% | |
| ATAAAGAACAACTGCTTACT+GGG | + | tig0025581:65618-65637 | None:intergenic | 30.0% | |
| AATAAAGAACAACTGCTTAC+TGG | + | tig0025581:65619-65638 | None:intergenic | 30.0% | |
| TAGATACAAAGAATATGTGC+AGG | - | tig0025581:65743-65762 | Msa1423890:intron | 30.0% | |
| TTCCTTCAAAATCTTGTGTA+AGG | + | tig0025581:65799-65818 | None:intergenic | 30.0% | |
| !! | ACAAGATTTTGAAGGAATAC+AGG | - | tig0025581:65802-65821 | Msa1423890:intron | 30.0% |
| !!! | TTTTGGTTCAAGTGTGTATT+TGG | - | tig0025581:65858-65877 | Msa1423890:intron | 30.0% |
| GAGATGTTTGACAAAATATC+AGG | + | tig0025581:65892-65911 | None:intergenic | 30.0% | |
| TTTAGAGAATGCTAAAAGCA+AGG | - | tig0025581:65951-65970 | Msa1423890:intron | 30.0% | |
| TTAGAGAATGCTAAAAGCAA+GGG | - | tig0025581:65952-65971 | Msa1423890:intron | 30.0% | |
| ! | GTATCTATTTTCTGAACATG+TGG | - | tig0025581:66165-66184 | Msa1423890:CDS | 30.0% |
| ! | ATGCTTTTAGATTTGTGGAG+AGG | - | tig0025581:58655-58674 | Msa1423890:three_prime_UTR | 35.0% |
| ! | TGCTTTTAGATTTGTGGAGA+GGG | - | tig0025581:58656-58675 | Msa1423890:three_prime_UTR | 35.0% |
| ATTTGATTCAGCAAGCACAT+AGG | - | tig0025581:58743-58762 | Msa1423890:three_prime_UTR | 35.0% | |
| GACGACATTGTCTTAGATAA+TGG | - | tig0025581:58793-58812 | Msa1423890:three_prime_UTR | 35.0% | |
| !! | ATTGTCTTAGATAATGGACC+TGG | - | tig0025581:58799-58818 | Msa1423890:three_prime_UTR | 35.0% |
| AGATTTGTCTCATACTCAAC+AGG | - | tig0025581:58879-58898 | Msa1423890:CDS | 35.0% | |
| ACAGGTGAAAAGGAAGAAAA+TGG | - | tig0025581:58897-58916 | Msa1423890:intron | 35.0% | |
| ATGTGAAAAAAAGGACACCA+AGG | - | tig0025581:58974-58993 | Msa1423890:intron | 35.0% | |
| GACAAGCCTGTTTATGTAAA+AGG | - | tig0025581:59165-59184 | Msa1423890:intron | 35.0% | |
| ! | GGCAAACCTTTTACATAAAC+AGG | + | tig0025581:59174-59193 | None:intergenic | 35.0% |
| GTCAATTAATGTAGTGTGCT+GGG | + | tig0025581:59199-59218 | None:intergenic | 35.0% | |
| TGTCAATTAATGTAGTGTGC+TGG | + | tig0025581:59200-59219 | None:intergenic | 35.0% | |
| TTGCAAAGGGGTCATTAAAA+TGG | + | tig0025581:59355-59374 | None:intergenic | 35.0% | |
| !! | AGAGCTATAAAGCACTGATA+CGG | - | tig0025581:59428-59447 | Msa1423890:intron | 35.0% |
| ! | GTAATTATATGTGTCGGTGT+CGG | - | tig0025581:59499-59518 | Msa1423890:CDS | 35.0% |
| AGGTCCGACATAAATTTAGT+GGG | + | tig0025581:59666-59685 | None:intergenic | 35.0% | |
| TAGGTCCGACATAAATTTAG+TGG | + | tig0025581:59667-59686 | None:intergenic | 35.0% | |
| CTCAATCTCTGTCTTTGTTA+TGG | - | tig0025581:59873-59892 | Msa1423890:CDS | 35.0% | |
| GTACAAAAGTAGAAACCTTG+TGG | + | tig0025581:59928-59947 | None:intergenic | 35.0% | |
| ATAAGGTTTGAATTAGCCAG+AGG | + | tig0025581:60037-60056 | None:intergenic | 35.0% | |
| CGCTGAAAAGAAAGTTATTC+TGG | + | tig0025581:60094-60113 | None:intergenic | 35.0% | |
| ACTAAAAAGGGAATCTCATG+CGG | - | tig0025581:60225-60244 | Msa1423890:CDS | 35.0% | |
| !!! | CTCAGTGAGTTTTGTTCAAA+TGG | - | tig0025581:60311-60330 | Msa1423890:CDS | 35.0% |
| GTTTCTCTCGATAAGCAAAT+TGG | - | tig0025581:60403-60422 | Msa1423890:CDS | 35.0% | |
| ! | AAGAATATATTGAGGGCATG+AGG | - | tig0025581:60539-60558 | Msa1423890:CDS | 35.0% |
| AGTGTATTAGGAAAAACCCA+AGG | - | tig0025581:60563-60582 | Msa1423890:CDS | 35.0% | |
| AGCAATTTATCTCGCATGTT+TGG | + | tig0025581:60749-60768 | None:intergenic | 35.0% | |
| CGAGATAAATTGCTTGTGAT+GGG | - | tig0025581:60755-60774 | Msa1423890:CDS | 35.0% | |
| !! | TTCTAGATTTTAGTGAGTGG+TGG | - | tig0025581:60873-60892 | Msa1423890:CDS | 35.0% |
| TTCACTACGTACCATGTATT+TGG | + | tig0025581:60907-60926 | None:intergenic | 35.0% | |
| AAATACACCAAGACGAAAGA+CGG | + | tig0025581:61092-61111 | None:intergenic | 35.0% | |
| CTACGAAGATAAAAAACAGC+AGG | + | tig0025581:61153-61172 | None:intergenic | 35.0% | |
| TGAAGGAGTTCAGATTTACA+TGG | - | tig0025581:61192-61211 | Msa1423890:CDS | 35.0% | |
| CTAAGAATCACGTCAAAATG+CGG | - | tig0025581:61244-61263 | Msa1423890:CDS | 35.0% | |
| TACTTGAGTGACTTGAACTT+GGG | + | tig0025581:61285-61304 | None:intergenic | 35.0% | |
| ATACTTGAGTGACTTGAACT+TGG | + | tig0025581:61286-61305 | None:intergenic | 35.0% | |
| ! | GTTGAAGACAAGGTTTTCAA+AGG | + | tig0025581:61370-61389 | None:intergenic | 35.0% |
| ! | TTTTTCTTTCTGAATGGCAC+GGG | - | tig0025581:61712-61731 | Msa1423890:intron | 35.0% |
| CAACCTCTTGTGTAAAAAAG+AGG | - | tig0025581:61750-61769 | Msa1423890:intron | 35.0% | |
| !!! | TACCCTCTTTTTTACACAAG+AGG | + | tig0025581:61756-61775 | None:intergenic | 35.0% |
| CTTGTGTAAAAAAGAGGGTA+AGG | - | tig0025581:61756-61775 | Msa1423890:intron | 35.0% | |
| CCTAGTATACACCTATTTGA+TGG | + | tig0025581:62063-62082 | None:intergenic | 35.0% | |
| CCATCAAATAGGTGTATACT+AGG | - | tig0025581:62060-62079 | Msa1423890:CDS | 35.0% | |
| AGGTGTATACTAGGTGAAAT+AGG | - | tig0025581:62069-62088 | Msa1423890:CDS | 35.0% | |
| GGTGTATACTAGGTGAAATA+GGG | - | tig0025581:62070-62089 | Msa1423890:CDS | 35.0% | |
| GTGTATACTAGGTGAAATAG+GGG | - | tig0025581:62071-62090 | Msa1423890:CDS | 35.0% | |
| GTTAATAACAGAAACTGACC+CGG | + | tig0025581:62116-62135 | None:intergenic | 35.0% | |
| CAACTAACTAAGTGCTAACA+TGG | + | tig0025581:62156-62175 | None:intergenic | 35.0% | |
| CATGTTAGCACTTAGTTAGT+TGG | - | tig0025581:62154-62173 | Msa1423890:intron | 35.0% | |
| CTCAAACAGAATTAGAGACA+AGG | - | tig0025581:62209-62228 | Msa1423890:intron | 35.0% | |
| !! | TTGTGTAAACTGATTTTGGG+AGG | - | tig0025581:62257-62276 | Msa1423890:CDS | 35.0% |
| AAAATCTCCTCTAAACTCCA+AGG | + | tig0025581:62299-62318 | None:intergenic | 35.0% | |
| AAGAAGGTTGTAGAACCAAT+AGG | + | tig0025581:62348-62367 | None:intergenic | 35.0% | |
| GTCTGAACTTTGAATCAAGA+AGG | + | tig0025581:62364-62383 | None:intergenic | 35.0% | |
| ! | TAGTTGTGTGTTATTGGTGT+TGG | + | tig0025581:62477-62496 | None:intergenic | 35.0% |
| ATCATGTACTATCGTCAGTA+TGG | + | tig0025581:62671-62690 | None:intergenic | 35.0% | |
| TGACGATAGTACATGATGTA+TGG | - | tig0025581:62674-62693 | Msa1423890:intron | 35.0% | |
| CCAAGGCCTATAATCAAAAA+TGG | + | tig0025581:63550-63569 | None:intergenic | 35.0% | |
| !! | CCATTTTTGATTATAGGCCT+TGG | - | tig0025581:63547-63566 | Msa1423890:intron | 35.0% |
| TCAAGATCCTGTATGAAACT+TGG | + | tig0025581:63596-63615 | None:intergenic | 35.0% | |
| CCCACTATAAAAAGAGTAAG+TGG | - | tig0025581:63617-63636 | Msa1423890:intron | 35.0% | |
| CAGATTGCAAAATATATCCC+TGG | - | tig0025581:63708-63727 | Msa1423890:intron | 35.0% | |
| TTGCAAAATATATCCCTGGA+AGG | - | tig0025581:63712-63731 | Msa1423890:intron | 35.0% | |
| !! | GGCTTTAAAATATACCTTCC+AGG | + | tig0025581:63729-63748 | None:intergenic | 35.0% |
| TTCAAGAAACCTACTGAAAG+TGG | - | tig0025581:63768-63787 | Msa1423890:intron | 35.0% | |
| ! | TTTTCACCTAACGTTATCAG+TGG | - | tig0025581:63804-63823 | Msa1423890:intron | 35.0% |
| GCACTGTAACAAACTAAAGA+AGG | + | tig0025581:63902-63921 | None:intergenic | 35.0% | |
| ACATGATTATCAACAGCTGA+AGG | - | tig0025581:64173-64192 | Msa1423890:intron | 35.0% | |
| ! | AAGGAGCGCAAAAGTTATAT+GGG | - | tig0025581:64192-64211 | Msa1423890:intron | 35.0% |
| ! | AGAAATCTGAAGGTACAAAG+AGG | - | tig0025581:64328-64347 | Msa1423890:intron | 35.0% |
| ! | AACATTTTCACATCTGTACC+TGG | + | tig0025581:64390-64409 | None:intergenic | 35.0% |
| GGTACAGATGTGAAAATGTT+TGG | - | tig0025581:64390-64409 | Msa1423890:intron | 35.0% | |
| GAGTCTTCAGTAAGTTCAAA+TGG | + | tig0025581:64435-64454 | None:intergenic | 35.0% | |
| TTTGAACTTACTGAAGACTC+TGG | - | tig0025581:64435-64454 | Msa1423890:intron | 35.0% | |
| ! | GATTTTTCCAATGGATAGGA+AGG | + | tig0025581:64591-64610 | None:intergenic | 35.0% |
| ! | ATAAACTTGGTGAAAGCACA+AGG | - | tig0025581:64613-64632 | Msa1423890:intron | 35.0% |
| ! | ACATGAAGTTTCTTTTGTGC+CGG | - | tig0025581:64671-64690 | Msa1423890:intron | 35.0% |
| TAAGCAGTCACTATTATCAG+TGG | - | tig0025581:64785-64804 | Msa1423890:intron | 35.0% | |
| ! | CAACCATTTCACTGTGTTTT+TGG | + | tig0025581:64821-64840 | None:intergenic | 35.0% |
| CAAAAACACAGTGAAATGGT+TGG | - | tig0025581:64819-64838 | Msa1423890:intron | 35.0% | |
| !! | ATGGTTGGTAAGTTAAAGGA+AGG | - | tig0025581:64834-64853 | Msa1423890:intron | 35.0% |
| CACATTTGGAAAAATTGCTC+AGG | - | tig0025581:64874-64893 | Msa1423890:intron | 35.0% | |
| GTTAAATCCTCCACTGTTAA+TGG | - | tig0025581:64918-64937 | Msa1423890:intron | 35.0% | |
| TTTGCAACAATGGTTTCTTC+GGG | + | tig0025581:65008-65027 | None:intergenic | 35.0% | |
| CTTTGCAACAATGGTTTCTT+CGG | + | tig0025581:65009-65028 | None:intergenic | 35.0% | |
| GCAAAGCAATTTGAACGAAA+TGG | - | tig0025581:65023-65042 | Msa1423890:CDS | 35.0% | |
| AATCAAAGCAAACACTTCAG+AGG | - | tig0025581:65064-65083 | Msa1423890:CDS | 35.0% | |
| AAACAACTTTGGATTCTGGA+AGG | - | tig0025581:65126-65145 | Msa1423890:intron | 35.0% | |
| !! | TTCAGGTTTTCCTAGCATTT+TGG | - | tig0025581:65166-65185 | Msa1423890:intron | 35.0% |
| TTTGTGTTGTCCAAAATGCT+AGG | + | tig0025581:65179-65198 | None:intergenic | 35.0% | |
| AACCATCCAAATCAATACCA+CGG | + | tig0025581:65331-65350 | None:intergenic | 35.0% | |
| !! | TATTGATTTGGATGGTTGCA+GGG | - | tig0025581:65334-65353 | Msa1423890:intron | 35.0% |
| TCTTGCTTAGATCTATTTGC+AGG | + | tig0025581:65377-65396 | None:intergenic | 35.0% | |
| GCAAGATACAAAACATGGAA+TGG | - | tig0025581:65391-65410 | Msa1423890:CDS | 35.0% | |
| TTACTTTCTTTCACAGGGTA+GGG | + | tig0025581:65419-65438 | None:intergenic | 35.0% | |
| AACACCTAATTCATGTGAAG+AGG | - | tig0025581:65445-65464 | Msa1423890:intron | 35.0% | |
| AAAGGAGGAACCTGAATTAA+AGG | - | tig0025581:65574-65593 | Msa1423890:intron | 35.0% | |
| AAGGAGGAACCTGAATTAAA+GGG | - | tig0025581:65575-65594 | Msa1423890:intron | 35.0% | |
| GTTATAGGTCCCTTTAATTC+AGG | + | tig0025581:65587-65606 | None:intergenic | 35.0% | |
| TACTGGGAAAAAGTCGTTAT+AGG | + | tig0025581:65602-65621 | None:intergenic | 35.0% | |
| ! | TTTTGTAGTAGTTAGTGTGG+TGG | - | tig0025581:65654-65673 | Msa1423890:intron | 35.0% |
| ! | CTCCTTACACAAGATTTTGA+AGG | - | tig0025581:65794-65813 | Msa1423890:intron | 35.0% |
| AAACATCTCACTCATTTGCA+GGG | - | tig0025581:65903-65922 | Msa1423890:intron | 35.0% | |
| TAGAGAATGCTAAAAGCAAG+GGG | - | tig0025581:65953-65972 | Msa1423890:intron | 35.0% | |
| CACAAATTAGGGAATCCTAT+AGG | - | tig0025581:66004-66023 | Msa1423890:intron | 35.0% | |
| TATTGTGCTTCATGAAGAAC+TGG | - | tig0025581:66232-66251 | Msa1423890:intron | 35.0% | |
| AGAAATCATCCCTACTCCAA+TGG | + | tig0025581:58707-58726 | None:intergenic | 40.0% | |
| AGTAGGGATGATTTCTGCAA+TGG | - | tig0025581:58711-58730 | Msa1423890:three_prime_UTR | 40.0% | |
| CTCATACTCAACAGGTGAAA+AGG | - | tig0025581:58887-58906 | Msa1423890:CDS | 40.0% | |
| TTAAAAGACGGAGAGAGGAA+TGG | - | tig0025581:58923-58942 | Msa1423890:intron | 40.0% | |
| TAAAAGACGGAGAGAGGAAT+GGG | - | tig0025581:58924-58943 | Msa1423890:intron | 40.0% | |
| ATAAACAGGCTTGTCTTGTC+GGG | + | tig0025581:59160-59179 | None:intergenic | 40.0% | |
| CATAAACAGGCTTGTCTTGT+CGG | + | tig0025581:59161-59180 | None:intergenic | 40.0% | |
| ATTAATGTAGTGTGCTGGGA+TGG | + | tig0025581:59195-59214 | None:intergenic | 40.0% | |
| TTGTAAGGAGTTTGTGTCAG+TGG | - | tig0025581:59397-59416 | Msa1423890:intron | 40.0% | |
| AAACAGAATAACTGCCGCAA+CGG | + | tig0025581:59550-59569 | None:intergenic | 40.0% | |
| TCGGACCTACATGATTTAGT+GGG | - | tig0025581:59678-59697 | Msa1423890:CDS | 40.0% | |
| ACAAAGACAGAGATTGAGAG+AGG | + | tig0025581:59871-59890 | None:intergenic | 40.0% | |
| ! | AATTGATTCCAGTCGAATCG+AGG | - | tig0025581:60483-60502 | Msa1423890:CDS | 40.0% |
| ATCTATTCAGTGTACGCCTT+GGG | + | tig0025581:60582-60601 | None:intergenic | 40.0% | |
| TATCTATTCAGTGTACGCCT+TGG | + | tig0025581:60583-60602 | None:intergenic | 40.0% | |
| GCGTACACTGAATAGATATG+AGG | - | tig0025581:60585-60604 | Msa1423890:CDS | 40.0% | |
| ! | CCTTACGAAACTAGCTTGTA+AGG | + | tig0025581:60628-60647 | None:intergenic | 40.0% |
| ! | CCTTACAAGCTAGTTTCGTA+AGG | - | tig0025581:60625-60644 | Msa1423890:CDS | 40.0% |
| ACGATATCATGTGTCAAACG+CGG | + | tig0025581:60722-60741 | None:intergenic | 40.0% | |
| GCGAGATAAATTGCTTGTGA+TGG | - | tig0025581:60754-60773 | Msa1423890:CDS | 40.0% | |
| !! | TTTAGTGAGTGGTGGATATG+CGG | - | tig0025581:60881-60900 | Msa1423890:CDS | 40.0% |
| AGATCGGAACTAATCTGCAA+TGG | + | tig0025581:61068-61087 | None:intergenic | 40.0% | |
| TCGTAGCAGATTATTGACGT+TGG | - | tig0025581:61167-61186 | Msa1423890:CDS | 40.0% | |
| GATTATTGACGTTGGTGTGA+AGG | - | tig0025581:61175-61194 | Msa1423890:CDS | 40.0% | |
| ! | TTACACAAGAGGTTGTTTCC+AGG | + | tig0025581:61745-61764 | None:intergenic | 40.0% |
| TGTAAAAAAGAGGGTAAGGC+TGG | - | tig0025581:61760-61779 | Msa1423890:intron | 40.0% | |
| TGGTACAATACACCAAATGG+TGG | - | tig0025581:61780-61799 | Msa1423890:intron | 40.0% | |
| GGTACAATACACCAAATGGT+GGG | - | tig0025581:61781-61800 | Msa1423890:intron | 40.0% | |
| ! | TTAGTATTTTCTCCCTTGCC+AGG | - | tig0025581:61890-61909 | Msa1423890:CDS | 40.0% |
| ! | TAGTATTTTCTCCCTTGCCA+GGG | - | tig0025581:61891-61910 | Msa1423890:CDS | 40.0% |
| ATTACGGAGTTAAAGGTCGA+GGG | + | tig0025581:61923-61942 | None:intergenic | 40.0% | |
| AATTACGGAGTTAAAGGTCG+AGG | + | tig0025581:61924-61943 | None:intergenic | 40.0% | |
| GTTAACAGACCCCATCAAAT+AGG | - | tig0025581:62049-62068 | Msa1423890:CDS | 40.0% | |
| ! | TGCTTGCTGAATTGGTTTAG+TGG | - | tig0025581:62180-62199 | Msa1423890:intron | 40.0% |
| ! | TGCTGAATTGGTTTAGTGGT+TGG | - | tig0025581:62184-62203 | Msa1423890:intron | 40.0% |
| AACAGAATTAGAGACAAGGG+AGG | - | tig0025581:62213-62232 | Msa1423890:intron | 40.0% | |
| ACAGAATTAGAGACAAGGGA+GGG | - | tig0025581:62214-62233 | Msa1423890:intron | 40.0% | |
| AGACAAGGGAGGGAAATAAT+AGG | - | tig0025581:62224-62243 | Msa1423890:intron | 40.0% | |
| TGATTCAAAGTTCAGACCGA+AGG | - | tig0025581:62367-62386 | Msa1423890:intron | 40.0% | |
| !! | AGATAAATGGGTACCGACAA+TGG | + | tig0025581:62419-62438 | None:intergenic | 40.0% |
| TGAAGTCGTAATCAGCCATT+TGG | - | tig0025581:62530-62549 | Msa1423890:intron | 40.0% | |
| ! | TTACGATAGAGCCATTGACT+TGG | - | tig0025581:62738-62757 | Msa1423890:intron | 40.0% |
| !! | TTTATCTGGCTCTTCATGGA+CGG | + | tig0025581:62775-62794 | None:intergenic | 40.0% |
| TACGATAAAATGGAAGAGGC+TGG | - | tig0025581:62990-63009 | Msa1423890:intron | 40.0% | |
| ! | TCAATAAGTGCTACTGCCAA+GGG | - | tig0025581:63216-63235 | Msa1423890:intron | 40.0% |
| GTGATGGCACAACATCATAA+AGG | + | tig0025581:63281-63300 | None:intergenic | 40.0% | |
| TTGAGAAAGAAATCCCTACC+AGG | - | tig0025581:63334-63353 | Msa1423890:intron | 40.0% | |
| TGAGAAAGAAATCCCTACCA+GGG | - | tig0025581:63335-63354 | Msa1423890:intron | 40.0% | |
| ATTATTTCCTTTGCTTGCCC+TGG | + | tig0025581:63355-63374 | None:intergenic | 40.0% | |
| AGGGCAAGCAAAGGAAATAA+TGG | - | tig0025581:63354-63373 | Msa1423890:intron | 40.0% | |
| CCTCAAAAGTCATTCCGTTA+GGG | + | tig0025581:63431-63450 | None:intergenic | 40.0% | |
| ACCTCAAAAGTCATTCCGTT+AGG | + | tig0025581:63432-63451 | None:intergenic | 40.0% | |
| CACACATCCAAGTTTCATAC+AGG | - | tig0025581:63586-63605 | Msa1423890:intron | 40.0% | |
| AAGCTTTCTGAATCCACTTC+TGG | + | tig0025581:63750-63769 | None:intergenic | 40.0% | |
| AGAAACCTACTGAAAGTGGA+AGG | - | tig0025581:63772-63791 | Msa1423890:intron | 40.0% | |
| ! | GTCATTTGGAACTTCCTCTT+TGG | + | tig0025581:64070-64089 | None:intergenic | 40.0% |
| GGAAGTTCCAAATGACGATT+TGG | - | tig0025581:64074-64093 | Msa1423890:intron | 40.0% | |
| ! | AGTTCCAAATGACGATTTGG+AGG | - | tig0025581:64077-64096 | Msa1423890:intron | 40.0% |
| GTTTCCTCCAAATCGTCATT+TGG | + | tig0025581:64084-64103 | None:intergenic | 40.0% | |
| ! | GAAGGAGCGCAAAAGTTATA+TGG | - | tig0025581:64191-64210 | Msa1423890:intron | 40.0% |
| ! | AGGAGCGCAAAAGTTATATG+GGG | - | tig0025581:64193-64212 | Msa1423890:intron | 40.0% |
| ! | TGGGGAGTTTGTTTGATGAA+AGG | - | tig0025581:64211-64230 | Msa1423890:intron | 40.0% |
| ! | GGGGAGTTTGTTTGATGAAA+GGG | - | tig0025581:64212-64231 | Msa1423890:intron | 40.0% |
| TGAAAGGGAAAGTGAAGTCA+CGG | - | tig0025581:64227-64246 | Msa1423890:intron | 40.0% | |
| CAGTCTGATAGCCTATCTAA+AGG | - | tig0025581:64267-64286 | Msa1423890:intron | 40.0% | |
| ACTCGTGAATCATATTCTCC+AGG | - | tig0025581:64369-64388 | Msa1423890:intron | 40.0% | |
| AGACAAAGAAACTGCAATCG+TGG | - | tig0025581:64468-64487 | Msa1423890:intron | 40.0% | |
| TTTCCAGAAAGGATACAGTC+AGG | - | tig0025581:64491-64510 | Msa1423890:intron | 40.0% | |
| ! | TCTTTTGACCAAAGACCTCT+AGG | - | tig0025581:64561-64580 | Msa1423890:intron | 40.0% |
| !!! | ATTCCTGGGGACTTTTTTCT+TGG | + | tig0025581:64742-64761 | None:intergenic | 40.0% |
| AATTCCAGGGATGGTAGTAA+CGG | - | tig0025581:64759-64778 | Msa1423890:intron | 40.0% | |
| TAAGAGAGAGCTTTCAGACT+TGG | - | tig0025581:64956-64975 | Msa1423890:intron | 40.0% | |
| AGAGCTTTCAGACTTGGATT+TGG | - | tig0025581:64962-64981 | Msa1423890:intron | 40.0% | |
| GAGCTTTCAGACTTGGATTT+GGG | - | tig0025581:64963-64982 | Msa1423890:intron | 40.0% | |
| CCTGAACTTAATACCAAGGT+TGG | + | tig0025581:65152-65171 | None:intergenic | 40.0% | |
| CCAACCTTGGTATTAAGTTC+AGG | - | tig0025581:65149-65168 | Msa1423890:intron | 40.0% | |
| !! | AATGAGCCGTGGTATTGATT+TGG | - | tig0025581:65322-65341 | Msa1423890:intron | 40.0% |
| !! | GTATTGATTTGGATGGTTGC+AGG | - | tig0025581:65333-65352 | Msa1423890:intron | 40.0% |
| ATTTGCAGGCACTCTTCTAT+TGG | + | tig0025581:65363-65382 | None:intergenic | 40.0% | |
| CTTACTTTCTTTCACAGGGT+AGG | + | tig0025581:65420-65439 | None:intergenic | 40.0% | |
| ! | AGAGCAACTATTTTCATCCG+AGG | + | tig0025581:65540-65559 | None:intergenic | 40.0% |
| TAGTAGTTAGTGTGGTGGTA+AGG | - | tig0025581:65659-65678 | Msa1423890:intron | 40.0% | |
| AGAATATGTGCAGGATTACC+AGG | - | tig0025581:65752-65771 | Msa1423890:intron | 40.0% | |
| GAATATGTGCAGGATTACCA+GGG | - | tig0025581:65753-65772 | Msa1423890:intron | 40.0% | |
| TGTAACTCTCGTATTTACCC+TGG | + | tig0025581:65773-65792 | None:intergenic | 40.0% | |
| CAAACATCTCACTCATTTGC+AGG | - | tig0025581:65902-65921 | Msa1423890:intron | 40.0% | |
| AGGGTTGAGTTTCAGAAACT+AGG | - | tig0025581:65922-65941 | Msa1423890:intron | 40.0% | |
| AGAGAATGCTAAAAGCAAGG+GGG | - | tig0025581:65954-65973 | Msa1423890:intron | 40.0% | |
| GGGGATAAGGATAGATATGA+CGG | - | tig0025581:65973-65992 | Msa1423890:intron | 40.0% | |
| ACGGCATTGCAACACAAATT+AGG | - | tig0025581:65992-66011 | Msa1423890:intron | 40.0% | |
| CGGCATTGCAACACAAATTA+GGG | - | tig0025581:65993-66012 | Msa1423890:intron | 40.0% | |
| ! | AGTATTGAGTCTACATGCAC+GGG | + | tig0025581:66062-66081 | None:intergenic | 40.0% |
| ! | CAGTATTGAGTCTACATGCA+CGG | + | tig0025581:66063-66082 | None:intergenic | 40.0% |
| TGTCTCTGCAATTCACATCA+TGG | + | tig0025581:66191-66210 | None:intergenic | 40.0% | |
| ATTCTGCATGAAGTGTGAAG+AGG | + | tig0025581:66363-66382 | None:intergenic | 40.0% | |
| TCATGCAGAATACCAAGCAA+AGG | - | tig0025581:66372-66391 | Msa1423890:CDS | 40.0% | |
| AAAGTCTCTGATCCTTTGCT+TGG | + | tig0025581:66387-66406 | None:intergenic | 40.0% | |
| !!! | CCAGACCCTTTTTCAAATTC+CGG | - | tig0025581:66535-66554 | Msa1423890:CDS | 40.0% |
| ! | GTCTCAATTTTCTCCAGGAA+TGG | + | tig0025581:66614-66633 | None:intergenic | 40.0% |
| CAATGGTTGGCAGCAACATT+CGG | + | tig0025581:58690-58709 | None:intergenic | 45.0% | |
| ATCATCCCTACTCCAATGGT+TGG | + | tig0025581:58703-58722 | None:intergenic | 45.0% | |
| CACTTGGTTGTGAACGAGAT+TGG | - | tig0025581:58769-58788 | Msa1423890:three_prime_UTR | 45.0% | |
| !! | CTTAGATAATGGACCTGGAG+AGG | - | tig0025581:58804-58823 | Msa1423890:three_prime_UTR | 45.0% |
| TGCAGACAGCAGAAAATCCT+TGG | + | tig0025581:58994-59013 | None:intergenic | 45.0% | |
| GAAACGTCGAAGCAATCCTT+AGG | - | tig0025581:59027-59046 | Msa1423890:intron | 45.0% | |
| AGAGGCTCTTCGTCTTCAAT+CGG | - | tig0025581:59113-59132 | Msa1423890:intron | 45.0% | |
| TCGGGCCATAATTTCGTCTT+GGG | + | tig0025581:59142-59161 | None:intergenic | 45.0% | |
| GTCGGACCTACATGATTTAG+TGG | - | tig0025581:59677-59696 | Msa1423890:CDS | 45.0% | |
| TGGGTCCCACTAAATCATGT+AGG | + | tig0025581:59686-59705 | None:intergenic | 45.0% | |
| !! | GACTTCTTTGAGGTTCCACA+AGG | - | tig0025581:59910-59929 | Msa1423890:CDS | 45.0% |
| CTTCAGATTGTCACTACCTC+TGG | - | tig0025581:60018-60037 | Msa1423890:CDS | 45.0% | |
| AGCTGCAATGTCACAAACAG+TGG | - | tig0025581:60183-60202 | Msa1423890:CDS | 45.0% | |
| GCTGCAATGTCACAAACAGT+GGG | - | tig0025581:60184-60203 | Msa1423890:CDS | 45.0% | |
| ATTCCAGTCGAATCGAGGTT+TGG | - | tig0025581:60488-60507 | Msa1423890:CDS | 45.0% | |
| ! | AGGGCATGAGGAAGTGTATT+AGG | - | tig0025581:60551-60570 | Msa1423890:CDS | 45.0% |
| CGATATCATGTGTCAAACGC+GGG | + | tig0025581:60721-60740 | None:intergenic | 45.0% | |
| TGGATATGCGGCCAAATACA+TGG | - | tig0025581:60893-60912 | Msa1423890:CDS | 45.0% | |
| CAAGACGAAAGACGGTAGAT+CGG | + | tig0025581:61084-61103 | None:intergenic | 45.0% | |
| TGGTCGAAGAACGAGATCTA+TGG | - | tig0025581:61212-61231 | Msa1423890:CDS | 45.0% | |
| GAGTGACTTGAACTTGGGTT+TGG | + | tig0025581:61280-61299 | None:intergenic | 45.0% | |
| GGCTGGTACAATACACCAAA+TGG | - | tig0025581:61777-61796 | Msa1423890:intron | 45.0% | |
| ! | AGTATTTTCTCCCTTGCCAG+GGG | - | tig0025581:61892-61911 | Msa1423890:CDS | 45.0% |
| GTGAAATAGGGGTGATCATC+CGG | - | tig0025581:62082-62101 | Msa1423890:CDS | 45.0% | |
| TGAAATAGGGGTGATCATCC+GGG | - | tig0025581:62083-62102 | Msa1423890:intron | 45.0% | |
| TGATCATCCGGGAATATTGC+CGG | - | tig0025581:62094-62113 | Msa1423890:intron | 45.0% | |
| TAACATGGCTATCAGCTGCT+GGG | + | tig0025581:62141-62160 | None:intergenic | 45.0% | |
| !! | AAACTGATTTTGGGAGGTCC+TGG | - | tig0025581:62263-62282 | Msa1423890:CDS | 45.0% |
| CTCGAATCCTTGGAGTTTAG+AGG | - | tig0025581:62289-62308 | Msa1423890:CDS | 45.0% | |
| CAAAGTTCAGACCGAAGGAT+AGG | - | tig0025581:62372-62391 | Msa1423890:intron | 45.0% | |
| CGACGGTTATTCCTATCCTT+CGG | + | tig0025581:62386-62405 | None:intergenic | 45.0% | |
| !! | TTATCTGGCTCTTCATGGAC+GGG | + | tig0025581:62774-62793 | None:intergenic | 45.0% |
| GTCCATGAAGAGCCAGATAA+AGG | - | tig0025581:62774-62793 | Msa1423890:intron | 45.0% | |
| !! | TGCCTTTATCTGGCTCTTCA+TGG | + | tig0025581:62779-62798 | None:intergenic | 45.0% |
| ! | GAAGAGCCAGATAAAGGCAT+TGG | - | tig0025581:62780-62799 | Msa1423890:intron | 45.0% |
| ! | TCCTTGGTGTAGCTAGACAA+GGG | + | tig0025581:62965-62984 | None:intergenic | 45.0% |
| ! | TTCCTTGGTGTAGCTAGACA+AGG | + | tig0025581:62966-62985 | None:intergenic | 45.0% |
| AATGGAAGAGGCTGGACTTA+AGG | - | tig0025581:62998-63017 | Msa1423890:intron | 45.0% | |
| AAGAGGCTGGACTTAAGGAA+AGG | - | tig0025581:63003-63022 | Msa1423890:intron | 45.0% | |
| AGAGGCTGGACTTAAGGAAA+GGG | - | tig0025581:63004-63023 | Msa1423890:intron | 45.0% | |
| TGGACTTAAGGAAAGGGAAG+TGG | - | tig0025581:63010-63029 | Msa1423890:intron | 45.0% | |
| AGGGAAGTGGAAACTCTTCA+AGG | - | tig0025581:63023-63042 | Msa1423890:intron | 45.0% | |
| ! | GTCAATAAGTGCTACTGCCA+AGG | - | tig0025581:63215-63234 | Msa1423890:intron | 45.0% |
| TGCTTGTCTGTCATTCGTGA+TGG | + | tig0025581:63297-63316 | None:intergenic | 45.0% | |
| ! | CCCTAACGGAATGACTTTTG+AGG | - | tig0025581:63428-63447 | Msa1423890:intron | 45.0% |
| ! | GTCACTGACTACTTTCTCCA+AGG | + | tig0025581:63567-63586 | None:intergenic | 45.0% |
| AGGTACCTTCCACTTTCAGT+AGG | + | tig0025581:63780-63799 | None:intergenic | 45.0% | |
| TTGTACTACATCAGCTCCAC+AGG | - | tig0025581:64035-64054 | Msa1423890:CDS | 45.0% | |
| TGTACTACATCAGCTCCACA+GGG | - | tig0025581:64036-64055 | Msa1423890:CDS | 45.0% | |
| GGTACAAAGAGGTTGAAAGC+AGG | - | tig0025581:64339-64358 | Msa1423890:intron | 45.0% | |
| TGCAATCGTGGTTTCCAGAA+AGG | - | tig0025581:64480-64499 | Msa1423890:intron | 45.0% | |
| ATGCCTGACTGTATCCTTTC+TGG | + | tig0025581:64497-64516 | None:intergenic | 45.0% | |
| AAGGGTTTCCTAGAGGTCTT+TGG | + | tig0025581:64572-64591 | None:intergenic | 45.0% | |
| AGGAAACCCTTCCTATCCAT+TGG | - | tig0025581:64581-64600 | Msa1423890:intron | 45.0% | |
| AAAAAGTCCCCAGGAATTCC+AGG | - | tig0025581:64745-64764 | Msa1423890:intron | 45.0% | |
| AAAAGTCCCCAGGAATTCCA+GGG | - | tig0025581:64746-64765 | Msa1423890:intron | 45.0% | |
| AAGTTAAAGGAAGGCCGACA+AGG | - | tig0025581:64843-64862 | Msa1423890:intron | 45.0% | |
| AATGTGACTGCGTACCTTGT+CGG | + | tig0025581:64860-64879 | None:intergenic | 45.0% | |
| ACAAGGTACGCAGTCACATT+TGG | - | tig0025581:64860-64879 | Msa1423890:intron | 45.0% | |
| CTCAGGGATAACAACAGAAC+TGG | - | tig0025581:64891-64910 | Msa1423890:intron | 45.0% | |
| AACAATGGTTTCTTCGGGAG+TGG | + | tig0025581:65003-65022 | None:intergenic | 45.0% | |
| AAATTGCCAGAAATGAGCCG+TGG | - | tig0025581:65311-65330 | Msa1423890:intron | 45.0% | |
| TCAATACCACGGCTCATTTC+TGG | + | tig0025581:65320-65339 | None:intergenic | 45.0% | |
| !! | AGCCGTGGTATTGATTTGGA+TGG | - | tig0025581:65326-65345 | Msa1423890:intron | 45.0% |
| GGCACCTCTTCACATGAATT+AGG | + | tig0025581:65452-65471 | None:intergenic | 45.0% | |
| GCCTGATGGAAGAAAGGATT+CGG | - | tig0025581:65469-65488 | Msa1423890:intron | 45.0% | |
| ACCGAATCCTTTCTTCCATC+AGG | + | tig0025581:65473-65492 | None:intergenic | 45.0% | |
| TGCTAAAAGCAAGGGGGATA+AGG | - | tig0025581:65960-65979 | Msa1423890:intron | 45.0% | |
| AGGGAATCCTATAGGCAATG+CGG | - | tig0025581:66012-66031 | Msa1423890:intron | 45.0% | |
| ATCCTATAGGCAATGCGGAT+CGG | - | tig0025581:66017-66036 | Msa1423890:intron | 45.0% | |
| TGTGCTTCATGAAGAACTGG+TGG | - | tig0025581:66235-66254 | Msa1423890:intron | 45.0% | |
| CCGGAATTTGAAAAAGGGTC+TGG | + | tig0025581:66538-66557 | None:intergenic | 45.0% | |
| ! | TGCTTCGTTTTCACCATTCC+TGG | - | tig0025581:66598-66617 | Msa1423890:CDS | 45.0% |
| CGAATGTTGCTGCCAACCAT+TGG | - | tig0025581:58688-58707 | Msa1423890:three_prime_UTR | 50.0% | |
| TTGCTGCCAACCATTGGAGT+AGG | - | tig0025581:58694-58713 | Msa1423890:three_prime_UTR | 50.0% | |
| TGCTGCCAACCATTGGAGTA+GGG | - | tig0025581:58695-58714 | Msa1423890:three_prime_UTR | 50.0% | |
| GCAAGCACATAGGCATCACT+TGG | - | tig0025581:58753-58772 | Msa1423890:three_prime_UTR | 50.0% | |
| AATGAAGGATCGTCCTCTCC+AGG | + | tig0025581:58820-58839 | None:intergenic | 50.0% | |
| GGAGAGGACGATCCTTCATT+TGG | - | tig0025581:58820-58839 | Msa1423890:three_prime_UTR | 50.0% | |
| GGCTGTTAAAAGACGGAGAG+AGG | - | tig0025581:58918-58937 | Msa1423890:intron | 50.0% | |
| CTGTCTGCAGCGAATTTGAC+AGG | - | tig0025581:59005-59024 | Msa1423890:intron | 50.0% | |
| GGCCTCCCAAGACGAAATTA+TGG | - | tig0025581:59134-59153 | Msa1423890:intron | 50.0% | |
| GGCCATAATTTCGTCTTGGG+AGG | + | tig0025581:59139-59158 | None:intergenic | 50.0% | |
| GTCGGGCCATAATTTCGTCT+TGG | + | tig0025581:59143-59162 | None:intergenic | 50.0% | |
| TCATGCGGTCGAGTTCATTC+AGG | - | tig0025581:60240-60259 | Msa1423890:CDS | 50.0% | |
| CGAGTTCATTCAGGCAATCC+AGG | - | tig0025581:60249-60268 | Msa1423890:CDS | 50.0% | |
| GTTCATTCAGGCAATCCAGG+AGG | - | tig0025581:60252-60271 | Msa1423890:CDS | 50.0% | |
| CAAGAGCTTGAACTACCTCC+TGG | + | tig0025581:60270-60289 | None:intergenic | 50.0% | |
| ACCGTTATCTTTACCGCACG+TGG | - | tig0025581:60794-60813 | Msa1423890:CDS | 50.0% | |
| CCCACGTGCGGTAAAGATAA+CGG | + | tig0025581:60798-60817 | None:intergenic | 50.0% | |
| CCGTTATCTTTACCGCACGT+GGG | - | tig0025581:60795-60814 | Msa1423890:CDS | 50.0% | |
| TTATCTTTACCGCACGTGGG+TGG | - | tig0025581:60798-60817 | Msa1423890:CDS | 50.0% | |
| CGATCTACCGTCTTTCGTCT+TGG | - | tig0025581:61082-61101 | Msa1423890:CDS | 50.0% | |
| TCACGTCAAAATGCGGTCAG+AGG | - | tig0025581:61251-61270 | Msa1423890:CDS | 50.0% | |
| TGCCATTAAAAAGGGCAGCC+CGG | + | tig0025581:61846-61865 | None:intergenic | 50.0% | |
| GATCATCCGGGAATATTGCC+GGG | - | tig0025581:62095-62114 | Msa1423890:intron | 50.0% | |
| AACTGACCCGGCAATATTCC+CGG | + | tig0025581:62104-62123 | None:intergenic | 50.0% | |
| CTAACATGGCTATCAGCTGC+TGG | + | tig0025581:62142-62161 | None:intergenic | 50.0% | |
| ! | GTTGGAGCTGCTTGCTGAAT+TGG | - | tig0025581:62172-62191 | Msa1423890:intron | 50.0% |
| GTCCTGGATTCTCGAATCCT+TGG | - | tig0025581:62279-62298 | Msa1423890:CDS | 50.0% | |
| CTCCAAGGATTCGAGAATCC+AGG | + | tig0025581:62284-62303 | None:intergenic | 50.0% | |
| CAGCTGCCAATGCCTTTATC+TGG | + | tig0025581:62789-62808 | None:intergenic | 50.0% | |
| !! | AAGGCATTGGCAGCTGATGA+AGG | - | tig0025581:62793-62812 | Msa1423890:intron | 50.0% |
| TCCCTTGTCTAGCTACACCA+AGG | - | tig0025581:62961-62980 | Msa1423890:intron | 50.0% | |
| GTTGGAGGCTCCCATAGATT+TGG | - | tig0025581:63186-63205 | Msa1423890:intron | 50.0% | |
| CCAAGGGCAAACGTTCTTCA+CGG | - | tig0025581:63232-63251 | Msa1423890:intron | 50.0% | |
| TTCCTTTGCTTGCCCTGGTA+GGG | + | tig0025581:63350-63369 | None:intergenic | 50.0% | |
| TTTCCTTTGCTTGCCCTGGT+AGG | + | tig0025581:63351-63370 | None:intergenic | 50.0% | |
| CTCCTAAGGGGTAACCCTAA+CGG | - | tig0025581:63414-63433 | Msa1423890:intron | 50.0% | |
| TTCCGTTAGGGTTACCCCTT+AGG | + | tig0025581:63419-63438 | None:intergenic | 50.0% | |
| !! | TCTTTGGAACCTCTTCCCTG+TGG | + | tig0025581:64054-64073 | None:intergenic | 50.0% |
| ACAGGGAAGAGGTTCCAAAG+AGG | - | tig0025581:64053-64072 | Msa1423890:CDS | 50.0% | |
| GTGAAGTCACGGATAGCTCT+AGG | - | tig0025581:64238-64257 | Msa1423890:intron | 50.0% | |
| ! | GGATACAGTCAGGCATTGTC+TGG | - | tig0025581:64501-64520 | Msa1423890:intron | 50.0% |
| GGATAGGAAGGGTTTCCTAG+AGG | + | tig0025581:64579-64598 | None:intergenic | 50.0% | |
| ! | GTGAAAGCACAAGGCACAAC+AGG | - | tig0025581:64622-64641 | Msa1423890:intron | 50.0% |
| AGGCACAACAGGAAACACAC+AGG | - | tig0025581:64633-64652 | Msa1423890:intron | 50.0% | |
| CAACAGGAAACACACAGGAC+AGG | - | tig0025581:64638-64657 | Msa1423890:intron | 50.0% | |
| !!! | CCTGGGGACTTTTTTCTTGG+TGG | + | tig0025581:64739-64758 | None:intergenic | 50.0% |
| CCACCAAGAAAAAAGTCCCC+AGG | - | tig0025581:64736-64755 | Msa1423890:intron | 50.0% | |
| TACCATCCCTGGAATTCCTG+GGG | + | tig0025581:64755-64774 | None:intergenic | 50.0% | |
| CTACCATCCCTGGAATTCCT+GGG | + | tig0025581:64756-64775 | None:intergenic | 50.0% | |
| ACTACCATCCCTGGAATTCC+TGG | + | tig0025581:64757-64776 | None:intergenic | 50.0% | |
| AGTTCCGTTACTACCATCCC+TGG | + | tig0025581:64766-64785 | None:intergenic | 50.0% | |
| GATACCTCGCCCATTAACAG+TGG | + | tig0025581:64931-64950 | None:intergenic | 50.0% | |
| !! | TCATGTGAAGAGGTGCCTGA+TGG | - | tig0025581:65455-65474 | Msa1423890:intron | 50.0% |
| !! | AGAGGTGCCTGATGGAAGAA+AGG | - | tig0025581:65463-65482 | Msa1423890:intron | 50.0% |
| TACCGATCCGCATTGCCTAT+AGG | + | tig0025581:66022-66041 | None:intergenic | 50.0% | |
| CAACGGACACTCCTCGGATT+AGG | + | tig0025581:59533-59552 | None:intergenic | 55.0% | |
| !! | AATCCGAGGAGTGTCCGTTG+CGG | - | tig0025581:59533-59552 | Msa1423890:intron | 55.0% |
| ! | CCACCAAACCTCGATTCGAC+TGG | + | tig0025581:60494-60513 | None:intergenic | 55.0% |
| CCAGTCGAATCGAGGTTTGG+TGG | - | tig0025581:60491-60510 | Msa1423890:CDS | 55.0% | |
| AATGGCACGGGTTCAAGTCC+TGG | - | tig0025581:61724-61743 | Msa1423890:intron | 55.0% | |
| ACAAAGCTCCCGCATACGCA+GGG | + | tig0025581:61820-61839 | None:intergenic | 55.0% | |
| ! | TATGCGGGAGCTTTGTGCAC+CGG | - | tig0025581:61824-61843 | Msa1423890:intron | 55.0% |
| ! | CACCGGGCTGCCCTTTTTAA+TGG | - | tig0025581:61841-61860 | Msa1423890:CDS | 55.0% |
| !! | AGAGCCATTGACTTGGAGCC+TGG | - | tig0025581:62745-62764 | Msa1423890:intron | 55.0% |
| !! | GAGCCATTGACTTGGAGCCT+GGG | - | tig0025581:62746-62765 | Msa1423890:intron | 55.0% |
| GTTCCCAGGCTCCAAGTCAA+TGG | + | tig0025581:62752-62771 | None:intergenic | 55.0% | |
| CCGTGAAGAACGTTTGCCCT+TGG | + | tig0025581:63235-63254 | None:intergenic | 55.0% | |
| ATCCCTACCAGGGCAAGCAA+AGG | - | tig0025581:63345-63364 | Msa1423890:intron | 55.0% | |
| ACATCAGCTCCACAGGGAAG+AGG | - | tig0025581:64042-64061 | Msa1423890:CDS | 55.0% | |
| ! | TCCTCCACTGTTAATGGGCG+AGG | - | tig0025581:64924-64943 | Msa1423890:intron | 55.0% |
| ACCTCGCCCATTAACAGTGG+AGG | + | tig0025581:64928-64947 | None:intergenic | 55.0% | |
| ! | GGATTCTGGAAGGCCAACCT+TGG | - | tig0025581:65136-65155 | Msa1423890:intron | 55.0% |
| AAAGCAGACAGCGCGAACGT+TGG | - | tig0025581:65278-65297 | Msa1423890:intron | 55.0% | |
| CGGACACGTGTCCTAATCCG+AGG | - | tig0025581:59519-59538 | Msa1423890:CDS | 60.0% | |
| TCTTTACCGCACGTGGGTGG+AGG | - | tig0025581:60801-60820 | Msa1423890:CDS | 60.0% | |
| !! | GAGGTTGGTGGCCCCAAAAG+AGG | - | tig0025581:60820-60839 | Msa1423890:CDS | 60.0% |
| ! | CAAATGGTGGGACCCCTTCC+CGG | - | tig0025581:61793-61812 | Msa1423890:intron | 60.0% |
| CACAAAGCTCCCGCATACGC+AGG | + | tig0025581:61821-61840 | None:intergenic | 60.0% | |
| ! | ATGCGGGAGCTTTGTGCACC+GGG | - | tig0025581:61825-61844 | Msa1423890:intron | 60.0% |
| ! | CTCTTCATGGACGGGTTCCC+AGG | + | tig0025581:62766-62785 | None:intergenic | 60.0% |
| GTCCCCAGGAATTCCAGGGA+TGG | - | tig0025581:64750-64769 | Msa1423890:intron | 60.0% | |
| CTGCCGCAACGGACACTCCT+CGG | + | tig0025581:59539-59558 | None:intergenic | 65.0% | |
| TACCGCACGTGGGTGGAGGT+TGG | - | tig0025581:60805-60824 | Msa1423890:CDS | 65.0% | |
| CACCAACCTCCACCCACGTG+CGG | + | tig0025581:60810-60829 | None:intergenic | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | + | tig0025581:61795-61814 | None:intergenic | 65.0% | |
| CATACGCAGGGTCCGGGAAG+GGG | + | tig0025581:61808-61827 | None:intergenic | 65.0% | |
| GCATACGCAGGGTCCGGGAA+GGG | + | tig0025581:61809-61828 | None:intergenic | 65.0% | |
| CTTCCCGGACCCTGCGTATG+CGG | - | tig0025581:61808-61827 | Msa1423890:intron | 65.0% | |
| TTCCCGGACCCTGCGTATGC+GGG | - | tig0025581:61809-61828 | Msa1423890:intron | 65.0% | |
| ! | GAGGGTACGACCCCTGGCAA+GGG | + | tig0025581:61905-61924 | None:intergenic | 65.0% |
| ! | AAGGTCGAGGGTACGACCCC+TGG | + | tig0025581:61911-61930 | None:intergenic | 65.0% |
| CGCACGTGGGTGGAGGTTGG+TGG | - | tig0025581:60808-60827 | Msa1423890:CDS | 70.0% | |
| CGCATACGCAGGGTCCGGGA+AGG | + | tig0025581:61810-61829 | None:intergenic | 70.0% | |
| CTCCCGCATACGCAGGGTCC+GGG | + | tig0025581:61814-61833 | None:intergenic | 70.0% | |
| GCTCCCGCATACGCAGGGTC+CGG | + | tig0025581:61815-61834 | None:intergenic | 70.0% | |
| ! | CGAGGGTACGACCCCTGGCA+AGG | + | tig0025581:61906-61925 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0025581 | gene | 58655 | 66633 | 58655 | ID=Msa1423890;Name=Msa1423890 |
| tig0025581 | mRNA | 58655 | 66633 | 58655 | ID=Msa1423890-mRNA-1;Parent=Msa1423890;Name=Msa1423890-mRNA-1;_AED=0.30;_eAED=0.30;_QI=0|0.71|0.66|0.93|0.92|1|15|206|1065 |
| tig0025581 | exon | 58655 | 58908 | 58655 | ID=Msa1423890-mRNA-1:exon:3489;Parent=Msa1423890-mRNA-1 |
| tig0025581 | exon | 59032 | 59082 | 59032 | ID=Msa1423890-mRNA-1:exon:3488;Parent=Msa1423890-mRNA-1 |
| tig0025581 | exon | 59250 | 59364 | 59250 | ID=Msa1423890-mRNA-1:exon:3487;Parent=Msa1423890-mRNA-1 |
| tig0025581 | exon | 59465 | 59542 | 59465 | ID=Msa1423890-mRNA-1:exon:3486;Parent=Msa1423890-mRNA-1 |
| tig0025581 | exon | 59670 | 61271 | 59670 | ID=Msa1423890-mRNA-1:exon:3485;Parent=Msa1423890-mRNA-1 |
| tig0025581 | exon | 61495 | 61577 | 61495 | ID=Msa1423890-mRNA-1:exon:3484;Parent=Msa1423890-mRNA-1 |
| tig0025581 | exon | 61657 | 61725 | 61657 | ID=Msa1423890-mRNA-1:exon:3483;Parent=Msa1423890-mRNA-1 |
| tig0025581 | exon | 61839 | 62101 | 61839 | ID=Msa1423890-mRNA-1:exon:3482;Parent=Msa1423890-mRNA-1 |
| tig0025581 | exon | 62244 | 62315 | 62244 | ID=Msa1423890-mRNA-1:exon:3481;Parent=Msa1423890-mRNA-1 |
| tig0025581 | exon | 62474 | 62541 | 62474 | ID=Msa1423890-mRNA-1:exon:3480;Parent=Msa1423890-mRNA-1 |
| tig0025581 | exon | 63987 | 64091 | 63987 | ID=Msa1423890-mRNA-1:exon:3479;Parent=Msa1423890-mRNA-1 |
| tig0025581 | exon | 64974 | 65103 | 64974 | ID=Msa1423890-mRNA-1:exon:3478;Parent=Msa1423890-mRNA-1 |
| tig0025581 | exon | 65357 | 65434 | 65357 | ID=Msa1423890-mRNA-1:exon:3477;Parent=Msa1423890-mRNA-1 |
| tig0025581 | exon | 66102 | 66216 | 66102 | ID=Msa1423890-mRNA-1:exon:3476;Parent=Msa1423890-mRNA-1 |
| tig0025581 | exon | 66313 | 66633 | 66313 | ID=Msa1423890-mRNA-1:exon:3475;Parent=Msa1423890-mRNA-1 |
| tig0025581 | CDS | 66313 | 66633 | 66313 | ID=Msa1423890-mRNA-1:cds;Parent=Msa1423890-mRNA-1 |
| tig0025581 | CDS | 66102 | 66216 | 66102 | ID=Msa1423890-mRNA-1:cds;Parent=Msa1423890-mRNA-1 |
| tig0025581 | CDS | 65357 | 65434 | 65357 | ID=Msa1423890-mRNA-1:cds;Parent=Msa1423890-mRNA-1 |
| tig0025581 | CDS | 64974 | 65103 | 64974 | ID=Msa1423890-mRNA-1:cds;Parent=Msa1423890-mRNA-1 |
| tig0025581 | CDS | 63987 | 64091 | 63987 | ID=Msa1423890-mRNA-1:cds;Parent=Msa1423890-mRNA-1 |
| tig0025581 | CDS | 62474 | 62541 | 62474 | ID=Msa1423890-mRNA-1:cds;Parent=Msa1423890-mRNA-1 |
| tig0025581 | CDS | 62244 | 62315 | 62244 | ID=Msa1423890-mRNA-1:cds;Parent=Msa1423890-mRNA-1 |
| tig0025581 | CDS | 61839 | 62101 | 61839 | ID=Msa1423890-mRNA-1:cds;Parent=Msa1423890-mRNA-1 |
| tig0025581 | CDS | 61657 | 61725 | 61657 | ID=Msa1423890-mRNA-1:cds;Parent=Msa1423890-mRNA-1 |
| tig0025581 | CDS | 61495 | 61577 | 61495 | ID=Msa1423890-mRNA-1:cds;Parent=Msa1423890-mRNA-1 |
| tig0025581 | CDS | 59670 | 61271 | 59670 | ID=Msa1423890-mRNA-1:cds;Parent=Msa1423890-mRNA-1 |
| tig0025581 | CDS | 59465 | 59542 | 59465 | ID=Msa1423890-mRNA-1:cds;Parent=Msa1423890-mRNA-1 |
| tig0025581 | CDS | 59250 | 59364 | 59250 | ID=Msa1423890-mRNA-1:cds;Parent=Msa1423890-mRNA-1 |
| tig0025581 | CDS | 59032 | 59082 | 59032 | ID=Msa1423890-mRNA-1:cds;Parent=Msa1423890-mRNA-1 |
| tig0025581 | CDS | 58861 | 58908 | 58861 | ID=Msa1423890-mRNA-1:cds;Parent=Msa1423890-mRNA-1 |
| tig0025581 | three_prime_UTR | 58655 | 58860 | 58655 | ID=Msa1423890-mRNA-1:three_prime_utr;Parent=Msa1423890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
