Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1426220 | XP_013446203.1 | 98.131 | 749 | 14 | 0 | 1 | 749 | 1 | 749 | 0.0 | 1540 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1426220 | sp|Q8LJT8|TKI1_ARATH | 48.790 | 744 | 311 | 17 | 18 | 749 | 23 | 708 | 0.0 | 608 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1426220 | A0A072U331 | 98.131 | 749 | 14 | 0 | 1 | 749 | 1 | 749 | 0.0 | 1540 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1426220 | Msa1437840 | 0.802002 | 6.897468e-49 | -8.615850e-47 |
| Msa1252510 | Msa1426220 | 0.951517 | 1.727773e-109 | -8.615850e-47 |
| Msa1042400 | Msa1426220 | 0.804644 | 1.956340e-49 | -8.615850e-47 |
| Msa1123290 | Msa1426220 | 0.817272 | 3.594454e-52 | -8.615850e-47 |
| Msa1123310 | Msa1426220 | 0.811765 | 5.942787e-51 | -8.615850e-47 |
| Msa1198990 | Msa1426220 | 0.892585 | 1.386434e-74 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1426220 | MtrunA17_Chr8g0368751 | 98.131 | 749 | 14 | 0 | 1 | 749 | 1 | 749 | 0.0 | 1540 |
| Msa1426220 | MtrunA17_Chr8g0383431 | 50.746 | 134 | 61 | 3 | 324 | 453 | 97 | 229 | 1.00e-33 | 135 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1426220 | AT2G36960.1 | 48.790 | 744 | 311 | 17 | 18 | 749 | 23 | 708 | 0.0 | 608 |
| Msa1426220 | AT2G36960.2 | 48.790 | 744 | 311 | 17 | 18 | 749 | 23 | 708 | 0.0 | 608 |
| Msa1426220 | AT2G36960.3 | 48.790 | 744 | 312 | 17 | 18 | 749 | 23 | 709 | 0.0 | 608 |
| Msa1426220 | AT4G39380.2 | 29.472 | 492 | 242 | 23 | 325 | 764 | 90 | 528 | 4.27e-35 | 141 |
| Msa1426220 | AT4G39380.4 | 28.542 | 487 | 237 | 20 | 325 | 764 | 90 | 512 | 1.26e-34 | 139 |
| Msa1426220 | AT4G39380.3 | 28.542 | 487 | 237 | 20 | 325 | 764 | 90 | 512 | 1.26e-34 | 139 |
| Msa1426220 | AT4G39380.1 | 28.542 | 487 | 237 | 20 | 325 | 764 | 90 | 512 | 1.26e-34 | 139 |
Find 189 sgRNAs with CRISPR-Local
Find 618 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAAGAAGCTTTGAAAATT+TGG | 0.084090 | tig0025956:+36287 | Msa1426220:CDS |
| TAGAACATCTAAACCGTAAA+TGG | 0.113209 | tig0025956:+34463 | Msa1426220:CDS |
| GTGACACAGGTGGTCTTTAT+TGG | 0.213152 | tig0025956:+33309 | Msa1426220:intron |
| TGATGCTTTCTCATTTAAAA+AGG | 0.224510 | tig0025956:+36191 | Msa1426220:CDS |
| TCAAATGAGTCGCAACTAAA+AGG | 0.234613 | tig0025956:-36069 | None:intergenic |
| CACTGCCTTGTTGGTTTCTT+CGG | 0.248713 | tig0025956:-31624 | None:intergenic |
| TTCTTTAGATTCTGATAAAA+AGG | 0.251308 | tig0025956:+36260 | Msa1426220:CDS |
| TGTGTGGCAGCCTGATTCTT+TGG | 0.257457 | tig0025956:+36838 | Msa1426220:intron |
| CATCTCATATGTCATCTATC+TGG | 0.267866 | tig0025956:+36151 | Msa1426220:CDS |
| TTGGCATCCAAACATAATTC+TGG | 0.270617 | tig0025956:-32029 | None:intergenic |
| TAGTGGTTTGAGCAGCTTAA+AGG | 0.287882 | tig0025956:-38919 | None:intergenic |
| TGCTTGAATCGCCCCATTTA+CGG | 0.297198 | tig0025956:-34476 | None:intergenic |
| CAAGCAGCCCACTGCCTTGT+TGG | 0.297832 | tig0025956:-31633 | None:intergenic |
| TTCGTCAACGTTCATTCTTC+AGG | 0.303363 | tig0025956:+30816 | Msa1426220:five_prime_UTR |
| TGTAAGGAAGCGACCTTTGC+AGG | 0.317827 | tig0025956:+33533 | Msa1426220:CDS |
| CTTCGAGTGGGTTCATCAAT+TGG | 0.323326 | tig0025956:-34263 | None:intergenic |
| TTGGAGTAATTATTAGTTGA+TGG | 0.326788 | tig0025956:-35351 | None:intergenic |
| CGCTTCAATGGTGGTTTAGA+AGG | 0.338860 | tig0025956:-33675 | None:intergenic |
| TCTTAGGGAACTGTGTCTTT+TGG | 0.341341 | tig0025956:+31330 | Msa1426220:intron |
| TGGGAGAAGGCTGCAATTGC+TGG | 0.343454 | tig0025956:+33949 | Msa1426220:CDS |
| GTCATGTTCAACCTCATTTA+CGG | 0.345079 | tig0025956:-34019 | None:intergenic |
| TGCAGATGCTGCCGAGCATT+TGG | 0.351858 | tig0025956:+33984 | Msa1426220:CDS |
| TGCAGTTATCGTTGTGATCC+TGG | 0.353626 | tig0025956:-36002 | None:intergenic |
| CTGGGCTAGCAGATATGTAT+TGG | 0.355955 | tig0025956:+36511 | Msa1426220:CDS |
| GTTCATCAATTGGGAATAAC+TGG | 0.358395 | tig0025956:-34253 | None:intergenic |
| GCCTGATTCTTTGGGACCGC+TGG | 0.364608 | tig0025956:+36847 | Msa1426220:intron |
| GTGTGGCAGCCTGATTCTTT+GGG | 0.365601 | tig0025956:+36839 | Msa1426220:intron |
| TTCTTTGGGACCGCTGGACT+TGG | 0.365810 | tig0025956:+36853 | Msa1426220:CDS |
| GCTCCTCGGTGCTTGTATTA+TGG | 0.373696 | tig0025956:-35470 | None:intergenic |
| TGCTAGCCCAGTAAAATCTT+TGG | 0.376815 | tig0025956:-36499 | None:intergenic |
| TCAAATCAAGCTAGAGCATC+AGG | 0.382815 | tig0025956:+33591 | Msa1426220:CDS |
| AGAACATCTAAACCGTAAAT+GGG | 0.384564 | tig0025956:+34464 | Msa1426220:CDS |
| AGTCCGCTATCACTTAGAAT+TGG | 0.387258 | tig0025956:-36908 | None:intergenic |
| TCTTGGTCCAGAATTATGTT+TGG | 0.391977 | tig0025956:+32022 | Msa1426220:CDS |
| CTAAGTGTAAGCTCCAAGTA+TGG | 0.399722 | tig0025956:-34414 | None:intergenic |
| AGGATCGGAAGAAGAGTGTA+AGG | 0.399880 | tig0025956:+33517 | Msa1426220:CDS |
| TCTTCCGATCCTTCAATAGT+TGG | 0.404471 | tig0025956:-33506 | None:intergenic |
| CTGCGCTAAGAGTAGATTCC+TGG | 0.409594 | tig0025956:-34572 | None:intergenic |
| GGAACCCAACAAGATGGATA+TGG | 0.412579 | tig0025956:+38947 | Msa1426220:CDS |
| GGGCTTTAGGTGAAGCTTTG+AGG | 0.415646 | tig0025956:-33350 | None:intergenic |
| AGATACCTCAAACGGAATAT+AGG | 0.416775 | tig0025956:-34624 | None:intergenic |
| AAGCTTTGAAAATTTGGATA+AGG | 0.419067 | tig0025956:+36293 | Msa1426220:CDS |
| AGTGGTTTGAGCAGCTTAAA+GGG | 0.421205 | tig0025956:-38918 | None:intergenic |
| TCCATCTTGTTGGGTTCCCT+TGG | 0.425317 | tig0025956:-38942 | None:intergenic |
| TGGTTCTCTTATACTGAGCA+TGG | 0.436912 | tig0025956:+35219 | Msa1426220:CDS |
| TCCAGCGGTCCCAAAGAATC+AGG | 0.446228 | tig0025956:-36848 | None:intergenic |
| CCAACGAAGCATTGCAGCAT+TGG | 0.451784 | tig0025956:-32066 | None:intergenic |
| TTCGAGTGGGTTCATCAATT+GGG | 0.452434 | tig0025956:-34262 | None:intergenic |
| GAGATCCATATCCATCTTGT+TGG | 0.452953 | tig0025956:-38952 | None:intergenic |
| ACGAGGCAGCGAAAGAAATC+TGG | 0.454566 | tig0025956:+33759 | Msa1426220:CDS |
| ATGCTCACATTGCGCTTCAA+TGG | 0.455273 | tig0025956:-33687 | None:intergenic |
| CAACAAGGCAGTGGGCTGCT+TGG | 0.455321 | tig0025956:+31634 | Msa1426220:CDS |
| TGAGGAAATGTGGGTAAAGA+GGG | 0.457547 | tig0025956:-34182 | None:intergenic |
| CACTCGAAGAGCCTTGGAAA+TGG | 0.457606 | tig0025956:+34277 | Msa1426220:CDS |
| TCACCGCATTACGGCAAGTT+GGG | 0.459425 | tig0025956:+31682 | Msa1426220:CDS |
| TCGCTGTGGTACTTAGTAGA+TGG | 0.461633 | tig0025956:-36881 | None:intergenic |
| AGCTGACAGGCCTGATCCAT+TGG | 0.467051 | tig0025956:-35920 | None:intergenic |
| TTGTTGGGTTCCCTTGGTAG+TGG | 0.469706 | tig0025956:-38936 | None:intergenic |
| AAAGCTTCTTCACCGCATTA+CGG | 0.470669 | tig0025956:+31673 | Msa1426220:CDS |
| AGATCCATATCCATCTTGTT+GGG | 0.471474 | tig0025956:-38951 | None:intergenic |
| AAACCCTAATTCGAAGGAAA+AGG | 0.472043 | tig0025956:-30770 | None:intergenic |
| GGTCTTTATTGGAAAAGTAC+AGG | 0.474601 | tig0025956:+33320 | Msa1426220:CDS |
| TTGAAATCAACCAATGGATC+AGG | 0.474937 | tig0025956:+35910 | Msa1426220:CDS |
| TATGAGATGCCAGAGTTGAT+TGG | 0.475488 | tig0025956:-36137 | None:intergenic |
| GTCCACCTATATTCCGTTTG+AGG | 0.477808 | tig0025956:+34619 | Msa1426220:CDS |
| CAGGCCTGTCAGCTGGTGAG+TGG | 0.480010 | tig0025956:+35929 | Msa1426220:CDS |
| ACTTGAATAATTATCAAAGA+TGG | 0.484223 | tig0025956:+34547 | Msa1426220:CDS |
| AGTCAAAATATTATAAAACT+TGG | 0.484358 | tig0025956:+33651 | Msa1426220:CDS |
| TGCTGTTTCTGTTCAAAATG+AGG | 0.485084 | tig0025956:+31451 | Msa1426220:CDS |
| GGTTCTCTTATACTGAGCAT+GGG | 0.489139 | tig0025956:+35220 | Msa1426220:CDS |
| TCAAACAGACCCTTTGCCTA+TGG | 0.489217 | tig0025956:+36437 | Msa1426220:CDS |
| TTGAGGAAATGTGGGTAAAG+AGG | 0.489292 | tig0025956:-34183 | None:intergenic |
| CTCACATTGCGCTTCAATGG+TGG | 0.489784 | tig0025956:-33684 | None:intergenic |
| TTGATTGGCCCATCTTGTCT+TGG | 0.489846 | tig0025956:-36122 | None:intergenic |
| AGGCAAATAAGTTGAGGTAG+AGG | 0.490951 | tig0025956:-35424 | None:intergenic |
| AAGAGCATCGTTTATGTTCG+TGG | 0.492160 | tig0025956:-35400 | None:intergenic |
| TGGGCTAGCAGATATGTATT+GGG | 0.492380 | tig0025956:+36512 | Msa1426220:CDS |
| ATACTTCCATCTCTAGTGTT+AGG | 0.494102 | tig0025956:-35444 | None:intergenic |
| CAAATGAGTCGCAACTAAAA+GGG | 0.497793 | tig0025956:-36068 | None:intergenic |
| ATCTAAACACCAAGACAAGA+TGG | 0.498622 | tig0025956:+36113 | Msa1426220:CDS |
| AGGCCTGTCAGCTGGTGAGT+GGG | 0.499618 | tig0025956:+35930 | Msa1426220:CDS |
| TTGAACAGAAACAGCAGTCT+CGG | 0.504962 | tig0025956:-31444 | None:intergenic |
| CATTTCCAAGGCTCTTCGAG+TGG | 0.506871 | tig0025956:-34276 | None:intergenic |
| GGATTGTCTAACCATGCAGC+TGG | 0.508221 | tig0025956:-35271 | None:intergenic |
| ATCTCATATGTCATCTATCT+GGG | 0.510853 | tig0025956:+36152 | Msa1426220:CDS |
| TATTTGCCTAACACTAGAGA+TGG | 0.513819 | tig0025956:+35438 | Msa1426220:CDS |
| CAGCCCACTCACCAGCTGAC+AGG | 0.515171 | tig0025956:-35933 | None:intergenic |
| TGTTAACCGTAGCAGTGCTA+AGG | 0.515949 | tig0025956:+33713 | Msa1426220:CDS |
| CCAATGCTGCAATGCTTCGT+TGG | 0.516545 | tig0025956:+32066 | Msa1426220:CDS |
| GAAGGAGCACCAACTATTGA+AGG | 0.517304 | tig0025956:+33497 | Msa1426220:intron |
| AGGTTAGGCATTATTACTAT+CGG | 0.518815 | tig0025956:+31976 | Msa1426220:intron |
| TGAACCCACTCGAAGAGCCT+TGG | 0.518856 | tig0025956:+34271 | Msa1426220:CDS |
| TTCACCGCATTACGGCAAGT+TGG | 0.520835 | tig0025956:+31681 | Msa1426220:CDS |
| GGAAAAGCATAATCCATACT+TGG | 0.521228 | tig0025956:+34401 | Msa1426220:intron |
| CGAAGAAACCAACAAGGCAG+TGG | 0.522829 | tig0025956:+31625 | Msa1426220:CDS |
| AATGGATCAGGCCTGTCAGC+TGG | 0.522831 | tig0025956:+35922 | Msa1426220:CDS |
| CCTACTTTCAGGAGTGTCCC+AGG | 0.524134 | tig0025956:+35984 | Msa1426220:CDS |
| GGCAGCTCGCTCCAAATGCT+CGG | 0.527084 | tig0025956:-33995 | None:intergenic |
| ACAGTCTACATAGTGCTCCT+TGG | 0.527919 | tig0025956:-35370 | None:intergenic |
| GATAGCTACCTGGATTCTCC+TGG | 0.531492 | tig0025956:-34041 | None:intergenic |
| TGTAGGTCCACAAGGCTCCT+CGG | 0.533759 | tig0025956:-35484 | None:intergenic |
| CAAGATGGGCCAATCAACTC+TGG | 0.533877 | tig0025956:+36128 | Msa1426220:CDS |
| GCAAGAGATGTTGAAACACC+AGG | 0.536115 | tig0025956:-31476 | None:intergenic |
| GTTATTATGCCACAGCAGCC+AGG | 0.538950 | tig0025956:+31506 | Msa1426220:CDS |
| GGTGGAAATTGTCAACCTCC+TGG | 0.540963 | tig0025956:+33555 | Msa1426220:CDS |
| ACCATGCAGCTGGATGCTAC+AGG | 0.544866 | tig0025956:-35261 | None:intergenic |
| GCAGTTATCGTTGTGATCCT+GGG | 0.545144 | tig0025956:-36001 | None:intergenic |
| GAACATGACCAGGAGAATCC+AGG | 0.545240 | tig0025956:+34033 | Msa1426220:CDS |
| GAGGGCAGGACATGATCAGC+AGG | 0.546770 | tig0025956:-34164 | None:intergenic |
| AATCTCCCTTAGCACTGCTA+CGG | 0.546959 | tig0025956:-33719 | None:intergenic |
| TCTCGTACTCACCATTTCCA+AGG | 0.549688 | tig0025956:-34288 | None:intergenic |
| ATGATACTTGTTATCTGCAT+CGG | 0.550492 | tig0025956:-36472 | None:intergenic |
| CGCATTACGGCAAGTTGGGA+AGG | 0.553258 | tig0025956:+31686 | Msa1426220:CDS |
| TGGAAAAGAGATACCTCAAA+CGG | 0.555532 | tig0025956:-34632 | None:intergenic |
| ACCAAGGGAACCCAACAAGA+TGG | 0.557664 | tig0025956:+38941 | Msa1426220:CDS |
| GAAATGTGGGTAAAGAGGGC+AGG | 0.558444 | tig0025956:-34178 | None:intergenic |
| AGCACCAACTATTGAAGGAT+CGG | 0.558679 | tig0025956:+33502 | Msa1426220:CDS |
| TAATTATTAGTTGATGGCAT+AGG | 0.564335 | tig0025956:-35345 | None:intergenic |
| TGGAGCTGTAACTAGACACT+TGG | 0.564799 | tig0025956:+35542 | Msa1426220:CDS |
| GGCGATTCAAGCATAGCAGT+TGG | 0.565166 | tig0025956:+34486 | Msa1426220:CDS |
| TCTATTATTCGTCATGAAGA+CGG | 0.565255 | tig0025956:+36216 | Msa1426220:CDS |
| TTCTGAAAACCCTAATTCGA+AGG | 0.565310 | tig0025956:-30776 | None:intergenic |
| AGACGGATGAACAAACATCT+TGG | 0.566604 | tig0025956:+32005 | Msa1426220:CDS |
| GATTTCTTTCGCTGCCTCGT+AGG | 0.567940 | tig0025956:-33756 | None:intergenic |
| ACCCTTACCAACATTAGCGT+GGG | 0.568979 | tig0025956:+35958 | Msa1426220:CDS |
| CACAACCGTCCATAGGCAAA+GGG | 0.569694 | tig0025956:-36446 | None:intergenic |
| GCGAGCTGCCACCGTAAATG+AGG | 0.570527 | tig0025956:+34008 | Msa1426220:CDS |
| ATTTCCAAGGCTCTTCGAGT+GGG | 0.571261 | tig0025956:-34275 | None:intergenic |
| ATTACTATCGGCTTGTGAGA+CGG | 0.571764 | tig0025956:+31988 | Msa1426220:CDS |
| GGCTGCTTGGACTCGTAATG+AGG | 0.573209 | tig0025956:+31647 | Msa1426220:CDS |
| ATCTGGGCTGTAGGTCCACA+AGG | 0.573712 | tig0025956:-35492 | None:intergenic |
| AACTAGACACTTGGAAGACA+TGG | 0.575274 | tig0025956:+35551 | Msa1426220:CDS |
| CATGGAAAAGATGCTACAGA+TGG | 0.581591 | tig0025956:+35522 | Msa1426220:CDS |
| TGACAATTTCCACCCTGCAA+AGG | 0.582613 | tig0025956:-33546 | None:intergenic |
| ACCTGTAGCATCCAGCTGCA+TGG | 0.582691 | tig0025956:+35260 | Msa1426220:CDS |
| CCTGGGACACTCCTGAAAGT+AGG | 0.582761 | tig0025956:-35984 | None:intergenic |
| CCCCACGCTAATGTTGGTAA+GGG | 0.584481 | tig0025956:-35959 | None:intergenic |
| ATTGAAGCGCAATGTGAGCA+TGG | 0.587619 | tig0025956:+33689 | Msa1426220:CDS |
| TGCGATGATATCTGGGCTGT+AGG | 0.591392 | tig0025956:-35501 | None:intergenic |
| GTGGTGATAATATGAACGAC+CGG | 0.593278 | tig0025956:+35301 | Msa1426220:CDS |
| AAATGAGGTTGAACATGACC+AGG | 0.595235 | tig0025956:+34023 | Msa1426220:CDS |
| GTGATGGCGAATTCACAATC+CGG | 0.595408 | tig0025956:-35320 | None:intergenic |
| TCACAACCGTCCATAGGCAA+AGG | 0.597343 | tig0025956:-36447 | None:intergenic |
| GAAGAATGAACGTTGACGAA+AGG | 0.597746 | tig0025956:-30813 | None:intergenic |
| TTTGAGACAGTGTTAAGACC+AGG | 0.598024 | tig0025956:-33573 | None:intergenic |
| TCTAAACACCAAGACAAGAT+GGG | 0.599794 | tig0025956:+36114 | Msa1426220:CDS |
| TCGGACTCACAACCGTCCAT+AGG | 0.600708 | tig0025956:-36453 | None:intergenic |
| GTTCTCTTATACTGAGCATG+GGG | 0.601438 | tig0025956:+35221 | Msa1426220:CDS |
| TTGAATAGCAAGAGCATGTG+AGG | 0.604263 | tig0025956:+31364 | Msa1426220:five_prime_UTR |
| GTTGATGGCATAGGAAGTGA+TGG | 0.605318 | tig0025956:-35336 | None:intergenic |
| GCTGATATATATGCAGCGAT+AGG | 0.606767 | tig0025956:+34594 | Msa1426220:CDS |
| GTAAGGAAGCGACCTTTGCA+GGG | 0.609549 | tig0025956:+33534 | Msa1426220:CDS |
| CTTCCCAACTTGCCGTAATG+CGG | 0.610347 | tig0025956:-31685 | None:intergenic |
| CACCCTTACCAACATTAGCG+TGG | 0.610962 | tig0025956:+35957 | Msa1426220:CDS |
| GTTAACCGTAGCAGTGCTAA+GGG | 0.613796 | tig0025956:+33714 | Msa1426220:CDS |
| ACAGACCCTTTGCCTATGGA+CGG | 0.615853 | tig0025956:+36441 | Msa1426220:CDS |
| ATCAACTAATAATTACTCCA+AGG | 0.616499 | tig0025956:+35353 | Msa1426220:CDS |
| AGCTGCTCAAACCACTACCA+AGG | 0.619166 | tig0025956:+38925 | Msa1426220:CDS |
| TACCTCAAACGGAATATAGG+TGG | 0.621283 | tig0025956:-34621 | None:intergenic |
| GAAGAAACCAACAAGGCAGT+GGG | 0.624848 | tig0025956:+31626 | Msa1426220:CDS |
| AGCTTCACCTAAAGCCCCGT+AGG | 0.631771 | tig0025956:+33356 | Msa1426220:CDS |
| TGCTTGGACTCGTAATGAGG+AGG | 0.636752 | tig0025956:+31650 | Msa1426220:CDS |
| ACAAGCACCGAGGAGCCTTG+TGG | 0.639004 | tig0025956:+35477 | Msa1426220:CDS |
| GCTGCTCAAACCACTACCAA+GGG | 0.639677 | tig0025956:+38926 | Msa1426220:CDS |
| CCCTTACCAACATTAGCGTG+GGG | 0.641872 | tig0025956:+35959 | Msa1426220:CDS |
| TAATTATCAAAGATGGAACC+AGG | 0.642667 | tig0025956:+34554 | Msa1426220:CDS |
| GATGGGTTGAAATCAACCAA+TGG | 0.646134 | tig0025956:+35904 | Msa1426220:CDS |
| CAAATCAAGCTAGAGCATCA+GGG | 0.648400 | tig0025956:+33592 | Msa1426220:CDS |
| GAACATCTAAACCGTAAATG+GGG | 0.650522 | tig0025956:+34465 | Msa1426220:CDS |
| TTGAAGCGCAATGTGAGCAT+GGG | 0.660034 | tig0025956:+33690 | Msa1426220:CDS |
| CAAGAGATGTTGAAACACCA+GGG | 0.661608 | tig0025956:-31475 | None:intergenic |
| TCTGTTCAAAATGAGGACCC+TGG | 0.663043 | tig0025956:+31458 | Msa1426220:CDS |
| ACAGCCCAGATATCATCGCA+TGG | 0.663146 | tig0025956:+35504 | Msa1426220:CDS |
| TCAAAACGAAGCGTTTCCAG+TGG | 0.664522 | tig0025956:-30692 | None:intergenic |
| AGGAAGCGACCTTTGCAGGG+TGG | 0.670207 | tig0025956:+33537 | Msa1426220:CDS |
| TTTGAGCAATATCGTCCACA+AGG | 0.676555 | tig0025956:-36419 | None:intergenic |
| GAGACAGTGTTAAGACCAGG+AGG | 0.678024 | tig0025956:-33570 | None:intergenic |
| CATTGAATGAATCTTCATCG+TGG | 0.685581 | tig0025956:+30722 | Msa1426220:five_prime_UTR |
| AAGGAGCACTATGTAGACTG+TGG | 0.686935 | tig0025956:+35372 | Msa1426220:CDS |
| AGTGTTAGGCAAATAAGTTG+AGG | 0.686993 | tig0025956:-35430 | None:intergenic |
| ATGTTCAACCTCATTTACGG+TGG | 0.695133 | tig0025956:-34016 | None:intergenic |
| GATGGTATTTCCAAGTCCAG+CGG | 0.705178 | tig0025956:-36863 | None:intergenic |
| TTAGAATTGGATCATCGCTG+TGG | 0.716511 | tig0025956:-36895 | None:intergenic |
| CCTTACCAACATTAGCGTGG+GGG | 0.734952 | tig0025956:+35960 | Msa1426220:CDS |
| CAAATAACTCAAAACCTACG+AGG | 0.743562 | tig0025956:+33742 | Msa1426220:CDS |
| TAGCTCCGAAGAAACCAACA+AGG | 0.747304 | tig0025956:+31619 | Msa1426220:intron |
| AAGGGATTTGATGAACACTG+CGG | 0.752913 | tig0025956:-36050 | None:intergenic |
| GAAGCAATGAGAGATAAACA+AGG | 0.758708 | tig0025956:-36240 | None:intergenic |
| ATACCATAATACAAGCACCG+AGG | 0.827471 | tig0025956:+35467 | Msa1426220:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAATAAATA+AGG | - | tig0025956:36818-36837 | None:intergenic | 0.0% |
| !!! | CAAATATTTTATAATTTTGA+TGG | - | tig0025956:36667-36686 | None:intergenic | 10.0% |
| !!! | TATTTTTTTTTTTTTTTGTG+TGG | + | tig0025956:36822-36841 | Msa1426220:intron | 10.0% |
| !!! | TTTTCATTGAAATTTTCAAT+AGG | + | tig0025956:30971-30990 | Msa1426220:intron | 15.0% |
| !!! | AATTTGTTTGAAATTTGTTT+AGG | + | tig0025956:31018-31037 | Msa1426220:intron | 15.0% |
| !! | ATTTGAAAAAACAAACTAAT+TGG | - | tig0025956:31197-31216 | None:intergenic | 15.0% |
| !!! | TGTTTTTTCAAATTTTTTAC+TGG | + | tig0025956:31204-31223 | Msa1426220:intron | 15.0% |
| !! | AAATAGGTTTATACATATAA+TGG | + | tig0025956:32121-32140 | Msa1426220:intron | 15.0% |
| !!! | TTTCTTTAAAAAGAATCAAT+TGG | + | tig0025956:32241-32260 | Msa1426220:intron | 15.0% |
| !!! | TTCTTTAAAAAGAATCAATT+GGG | + | tig0025956:32242-32261 | Msa1426220:intron | 15.0% |
| !!! | TACTTTGTACAATTTTTTTT+TGG | + | tig0025956:33201-33220 | Msa1426220:intron | 15.0% |
| !!! | ACTTTGTACAATTTTTTTTT+GGG | + | tig0025956:33202-33221 | Msa1426220:intron | 15.0% |
| !!! | TAAAAATATTTTAAACCTAC+GGG | - | tig0025956:33374-33393 | None:intergenic | 15.0% |
| !!! | CTAAAAATATTTTAAACCTA+CGG | - | tig0025956:33375-33394 | None:intergenic | 15.0% |
| !! | AGTCAAAATATTATAAAACT+TGG | + | tig0025956:33651-33670 | Msa1426220:CDS | 15.0% |
| !! | TTTGTGAAATTACATATTTA+TGG | + | tig0025956:34356-34375 | Msa1426220:intron | 15.0% |
| !!! | AAGAAATCAATAGAATATTT+TGG | + | tig0025956:34804-34823 | Msa1426220:intron | 15.0% |
| !! | ACTAATTCAAAATTGAAATT+TGG | + | tig0025956:34895-34914 | Msa1426220:intron | 15.0% |
| !! | CTAATTCAAAATTGAAATTT+GGG | + | tig0025956:34896-34915 | Msa1426220:intron | 15.0% |
| !!! | AAAATACTTTTAGTAATGTA+TGG | + | tig0025956:35095-35114 | Msa1426220:intron | 15.0% |
| !!! | AAATACTTTTAGTAATGTAT+GGG | + | tig0025956:35096-35115 | Msa1426220:intron | 15.0% |
| !! | TAAATGTCAAATAAGTTTAT+GGG | - | tig0025956:35177-35196 | None:intergenic | 15.0% |
| !!! | TATTTTATAATTTTGATGGA+TGG | - | tig0025956:36663-36682 | None:intergenic | 15.0% |
| !! | TGCTTATTCTATTAATATAA+AGG | + | tig0025956:37645-37664 | Msa1426220:intron | 15.0% |
| !!! | TATAAAATTTTATAACAGAG+TGG | + | tig0025956:37709-37728 | Msa1426220:intron | 15.0% |
| !! | TAATCTTTGTTGATATTCTT+AGG | + | tig0025956:31314-31333 | Msa1426220:intron | 20.0% |
| !! | AATCTTTGTTGATATTCTTA+GGG | + | tig0025956:31315-31334 | Msa1426220:intron | 20.0% |
| !!! | TTTGATGTTTTTGTTTCTTT+TGG | + | tig0025956:31732-31751 | Msa1426220:intron | 20.0% |
| !! | AAAAATATAAGGAATCAGTA+AGG | - | tig0025956:32650-32669 | None:intergenic | 20.0% |
| !!! | GAATTTTGAATATACCAAAA+AGG | + | tig0025956:32777-32796 | Msa1426220:intron | 20.0% |
| !!! | TTAGCAATTTTCTTAAGAAT+TGG | + | tig0025956:33174-33193 | Msa1426220:intron | 20.0% |
| !!! | TAGCAATTTTCTTAAGAATT+GGG | + | tig0025956:33175-33194 | Msa1426220:intron | 20.0% |
| !!! | CTTTGTACAATTTTTTTTTG+GGG | + | tig0025956:33203-33222 | Msa1426220:intron | 20.0% |
| !!! | AAAAATATTTTAAACCTACG+GGG | - | tig0025956:33373-33392 | None:intergenic | 20.0% |
| !!! | TAAAATATTTTTAGAAGCCT+TGG | + | tig0025956:33381-33400 | Msa1426220:CDS | 20.0% |
| !! | ACTTGAATAATTATCAAAGA+TGG | + | tig0025956:34547-34566 | Msa1426220:CDS | 20.0% |
| !! | GTATAGAATTTGAAAAAACT+TGG | + | tig0025956:35024-35043 | Msa1426220:intron | 20.0% |
| !! | GTAAATGTCAAATAAGTTTA+TGG | - | tig0025956:35178-35197 | None:intergenic | 20.0% |
| !!! | ACATTTACATATCTTTTTGA+AGG | + | tig0025956:35190-35209 | Msa1426220:intron | 20.0% |
| !!! | GATAAATATTTTCATTTCCT+GGG | + | tig0025956:35696-35715 | Msa1426220:intron | 20.0% |
| !!! | ATAAATATTTTCATTTCCTG+GGG | + | tig0025956:35697-35716 | Msa1426220:intron | 20.0% |
| !!! | TTTAATCTACTGTTTTTGTT+TGG | + | tig0025956:35797-35816 | Msa1426220:intron | 20.0% |
| !! | TTCTTTAGATTCTGATAAAA+AGG | + | tig0025956:36260-36279 | Msa1426220:CDS | 20.0% |
| !! | AACCATTATATTTATTACAG+CGG | + | tig0025956:36687-36706 | Msa1426220:intron | 20.0% |
| !! | ATTGTATGAAATACTTCAAA+AGG | - | tig0025956:36770-36789 | None:intergenic | 20.0% |
| !! | AAAATAAATAAGGAAAGATG+AGG | - | tig0025956:36808-36827 | None:intergenic | 20.0% |
| !!! | ACTCTCTCAAATTTTAAAAT+TGG | + | tig0025956:37034-37053 | Msa1426220:intron | 20.0% |
| !!! | TCAAATTTTAAAATTGGAAG+TGG | + | tig0025956:37040-37059 | Msa1426220:intron | 20.0% |
| !!! | TTTTTCTTTAAACTAACTTG+AGG | + | tig0025956:37141-37160 | Msa1426220:intron | 20.0% |
| !! | ATGTATATGTTCATCTATTT+GGG | + | tig0025956:37204-37223 | Msa1426220:intron | 20.0% |
| !!! | CTCAATTTTTTTGTACAAAA+GGG | - | tig0025956:37236-37255 | None:intergenic | 20.0% |
| !!! | ACAATAGATTTTTCTTTCTT+CGG | - | tig0025956:38328-38347 | None:intergenic | 20.0% |
| !!! | GTTGATTCTAGTTTTAAATA+TGG | + | tig0025956:38439-38458 | Msa1426220:intron | 20.0% |
| !!! | ATTCTAGTTTTAAATATGGT+AGG | + | tig0025956:38443-38462 | Msa1426220:intron | 20.0% |
| !!! | CTTATGGTTTTAAGAATAAA+AGG | + | tig0025956:38487-38506 | Msa1426220:intron | 20.0% |
| ! | GCTATATATAAATGAAAGAC+AGG | - | tig0025956:31603-31622 | None:intergenic | 25.0% |
| ! | TTCTCAAAATTCTACATTGA+AGG | - | tig0025956:31784-31803 | None:intergenic | 25.0% |
| ! | AAAACAAGCCAAGATATTAT+CGG | - | tig0025956:31917-31936 | None:intergenic | 25.0% |
| !!! | ATTGGTATCTTTTGAGTTTT+TGG | - | tig0025956:32051-32070 | None:intergenic | 25.0% |
| ! | TAAATGATATCACAACTCAT+AGG | + | tig0025956:32389-32408 | Msa1426220:intron | 25.0% |
| !! | ATATGTTGCTTATAAAGTAC+GGG | - | tig0025956:33093-33112 | None:intergenic | 25.0% |
| !! | GATATGTTGCTTATAAAGTA+CGG | - | tig0025956:33094-33113 | None:intergenic | 25.0% |
| ! | CTTTATAAGCAACATATCAT+TGG | + | tig0025956:33096-33115 | Msa1426220:intron | 25.0% |
| ! | AAACTAGTAAAAGATCTTGA+AGG | - | tig0025956:33801-33820 | None:intergenic | 25.0% |
| !!! | AAGTTTGTTATGTTTCTATC+AGG | + | tig0025956:33898-33917 | Msa1426220:intron | 25.0% |
| ! | ATCAGCTGCATATAAAAAAT+GGG | + | tig0025956:33930-33949 | Msa1426220:CDS | 25.0% |
| ! | GTTTATCAATGTTAATTCCA+GGG | + | tig0025956:34126-34145 | Msa1426220:intron | 25.0% |
| ! | TTTATCAATGTTAATTCCAG+GGG | + | tig0025956:34127-34146 | Msa1426220:intron | 25.0% |
| ! | CTATAAATAGAAAACCATGT+GGG | + | tig0025956:34848-34867 | Msa1426220:intron | 25.0% |
| !! | TCAATTTTGAATTAGTTCAC+TGG | - | tig0025956:34891-34910 | None:intergenic | 25.0% |
| !! | TAATTTTTATCAGACCTCTA+GGG | + | tig0025956:34979-34998 | Msa1426220:intron | 25.0% |
| !!! | TATTTTTTATACATCCCTAG+AGG | - | tig0025956:34996-35015 | None:intergenic | 25.0% |
| !! | ATTGAGATTGAATTTTCATG+TGG | + | tig0025956:35065-35084 | Msa1426220:intron | 25.0% |
| !! | TTGAGATTGAATTTTCATGT+GGG | + | tig0025956:35066-35085 | Msa1426220:intron | 25.0% |
| !!! | TACATATCTTTTTGAAGGTA+TGG | + | tig0025956:35195-35214 | Msa1426220:intron | 25.0% |
| !!! | TAATTATTAGTTGATGGCAT+AGG | - | tig0025956:35348-35367 | None:intergenic | 25.0% |
| ! | TTGGAGTAATTATTAGTTGA+TGG | - | tig0025956:35354-35373 | None:intergenic | 25.0% |
| ! | ATCAACTAATAATTACTCCA+AGG | + | tig0025956:35353-35372 | Msa1426220:CDS | 25.0% |
| !! | AGATTTTCATTTTCATGTCA+TGG | + | tig0025956:35633-35652 | Msa1426220:intron | 25.0% |
| ! | TCTAATTTAGTGTACTTTGT+TGG | + | tig0025956:35666-35685 | Msa1426220:intron | 25.0% |
| !! | CGATAAATATTTTCATTTCC+TGG | + | tig0025956:35695-35714 | Msa1426220:intron | 25.0% |
| !! | TTGAACATTATCTAAAACAC+AGG | - | tig0025956:35746-35765 | None:intergenic | 25.0% |
| ! | TAAATCATTGCATAATAGAC+AGG | - | tig0025956:35857-35876 | None:intergenic | 25.0% |
| ! | TGATGCTTTCTCATTTAAAA+AGG | + | tig0025956:36191-36210 | Msa1426220:CDS | 25.0% |
| !! | AAATTTTCAAAGCTTCTTTC+AGG | - | tig0025956:36288-36307 | None:intergenic | 25.0% |
| !!! | TGAAAGAAGCTTTGAAAATT+TGG | + | tig0025956:36287-36306 | Msa1426220:CDS | 25.0% |
| !!! | AAGCTTTGAAAATTTGGATA+AGG | + | tig0025956:36293-36312 | Msa1426220:CDS | 25.0% |
| !! | ATTTAGCCAAAGATTTTACT+GGG | + | tig0025956:36493-36512 | Msa1426220:CDS | 25.0% |
| !! | CAGAAAAAAAGAGTATAGAA+AGG | - | tig0025956:36544-36563 | None:intergenic | 25.0% |
| ! | AACCGCTGTAATAAATATAA+TGG | - | tig0025956:36692-36711 | None:intergenic | 25.0% |
| ! | AATAGATGAACATATACATC+AGG | - | tig0025956:37203-37222 | None:intergenic | 25.0% |
| ! | GATGTATATGTTCATCTATT+TGG | + | tig0025956:37203-37222 | Msa1426220:intron | 25.0% |
| !!! | GCTCAATTTTTTTGTACAAA+AGG | - | tig0025956:37237-37256 | None:intergenic | 25.0% |
| ! | ACAAAAAAATTGAGCATAGA+AGG | + | tig0025956:37242-37261 | Msa1426220:intron | 25.0% |
| !! | AGTGATAGTTTTCATTAACT+TGG | - | tig0025956:37430-37449 | None:intergenic | 25.0% |
| ! | TTCATTGGATGAAATTTATG+TGG | - | tig0025956:37965-37984 | None:intergenic | 25.0% |
| !!! | CTCTTTTTTTTTTCAACACT+CGG | - | tig0025956:37999-38018 | None:intergenic | 25.0% |
| ! | TGATATAGCAGAGAATAATA+AGG | + | tig0025956:38047-38066 | Msa1426220:intron | 25.0% |
| ! | AACAATAGGGAAAATCAAAA+TGG | + | tig0025956:38176-38195 | Msa1426220:intron | 25.0% |
| !! | CAATAGATTTTTCTTTCTTC+GGG | - | tig0025956:38327-38346 | None:intergenic | 25.0% |
| !!! | CTATTCGTTGTTTCCTTTTT+TGG | + | tig0025956:30867-30886 | Msa1426220:intron | 30.0% |
| GATCTAACAAGTTCCAAAAA+AGG | - | tig0025956:30883-30902 | None:intergenic | 30.0% | |
| AAAATCGCAATTCACAATGT+AGG | - | tig0025956:31086-31105 | None:intergenic | 30.0% | |
| ! | CACATTCGTATGATTTTTGT+AGG | + | tig0025956:31551-31570 | Msa1426220:intron | 30.0% |
| TATTGCAATTAGCAGCTTTA+TGG | - | tig0025956:31760-31779 | None:intergenic | 30.0% | |
| !!! | CTTGTTTTTACTTTGTACAC+GGG | - | tig0025956:31815-31834 | None:intergenic | 30.0% |
| !!! | CCTTGTTTTTACTTTGTACA+CGG | - | tig0025956:31816-31835 | None:intergenic | 30.0% |
| ACAAAGTAAAAACAAGGATC+AGG | + | tig0025956:31819-31838 | Msa1426220:CDS | 30.0% | |
| TGAAATGAAACGCTATCATT+AGG | - | tig0025956:31891-31910 | None:intergenic | 30.0% | |
| TTTCATCTCCGATAATATCT+TGG | + | tig0025956:31906-31925 | Msa1426220:intron | 30.0% | |
| AGGTTAGGCATTATTACTAT+CGG | + | tig0025956:31976-31995 | Msa1426220:intron | 30.0% | |
| CGAGTGGTTGTTTATTAAAT+AGG | + | tig0025956:32105-32124 | Msa1426220:intron | 30.0% | |
| ACCATCATCTATGAACATAA+GGG | + | tig0025956:32199-32218 | Msa1426220:intron | 30.0% | |
| ATATCACAACTCATAGGAAT+TGG | + | tig0025956:32395-32414 | Msa1426220:intron | 30.0% | |
| TATCACAACTCATAGGAATT+GGG | + | tig0025956:32396-32415 | Msa1426220:intron | 30.0% | |
| ! | CTTTATTTCAACAGTTTGAC+TGG | - | tig0025956:32425-32444 | None:intergenic | 30.0% |
| GAGTAGTGAGGAAAAATATA+AGG | - | tig0025956:32661-32680 | None:intergenic | 30.0% | |
| GATTCCGTAAAAAACTAACA+AGG | - | tig0025956:32744-32763 | None:intergenic | 30.0% | |
| ! | CTAACTCATTCAATCCTTTT+TGG | - | tig0025956:32794-32813 | None:intergenic | 30.0% |
| GAATGAGTTAGTTAGTTAGT+TGG | + | tig0025956:32803-32822 | Msa1426220:intron | 30.0% | |
| ! | AGTTGGTTTATCATTGTGTT+AGG | + | tig0025956:32820-32839 | Msa1426220:intron | 30.0% |
| ! | GTTGGTTTATCATTGTGTTA+GGG | + | tig0025956:32821-32840 | Msa1426220:intron | 30.0% |
| TTGGTTTATCATTGTGTTAG+GGG | + | tig0025956:32822-32841 | Msa1426220:intron | 30.0% | |
| AGCCATCATAGAAAGAAAAT+GGG | - | tig0025956:32935-32954 | None:intergenic | 30.0% | |
| TAGCCATCATAGAAAGAAAA+TGG | - | tig0025956:32936-32955 | None:intergenic | 30.0% | |
| CTCACATAGAATGAGAAAAT+TGG | - | tig0025956:33029-33048 | None:intergenic | 30.0% | |
| TCAATTATTCCATGCTATTC+TGG | + | tig0025956:33049-33068 | Msa1426220:intron | 30.0% | |
| !! | AGCAACATATCATTGGTTTA+TGG | + | tig0025956:33103-33122 | Msa1426220:intron | 30.0% |
| GGTATTCTACTATTGTTCTT+AGG | + | tig0025956:33224-33243 | Msa1426220:intron | 30.0% | |
| CCTTCATGGAAGAATAAAAT+AGG | - | tig0025956:33482-33501 | None:intergenic | 30.0% | |
| ! | CCTATTTTATTCTTCCATGA+AGG | + | tig0025956:33479-33498 | Msa1426220:intron | 30.0% |
| CATCAGCTGCATATAAAAAA+TGG | + | tig0025956:33929-33948 | Msa1426220:CDS | 30.0% | |
| TGCATATAAAAAATGGGAGA+AGG | + | tig0025956:33936-33955 | Msa1426220:CDS | 30.0% | |
| ACAGTTGTAGTATTTGTACT+TGG | + | tig0025956:34064-34083 | Msa1426220:intron | 30.0% | |
| GGTTTATCAATGTTAATTCC+AGG | + | tig0025956:34125-34144 | Msa1426220:intron | 30.0% | |
| ! | TTATCAACAGAGTGATTTTG+AGG | - | tig0025956:34203-34222 | None:intergenic | 30.0% |
| TAGAACATCTAAACCGTAAA+TGG | + | tig0025956:34463-34482 | Msa1426220:CDS | 30.0% | |
| AGAACATCTAAACCGTAAAT+GGG | + | tig0025956:34464-34483 | Msa1426220:CDS | 30.0% | |
| TAATTATCAAAGATGGAACC+AGG | + | tig0025956:34554-34573 | Msa1426220:CDS | 30.0% | |
| TCCATCGTTCTATTATTGAT+TGG | + | tig0025956:34699-34718 | Msa1426220:intron | 30.0% | |
| ACCAATCAATAATAGAACGA+TGG | - | tig0025956:34703-34722 | None:intergenic | 30.0% | |
| ! | TATTGATTGGTTAGTTAGTC+AGG | + | tig0025956:34712-34731 | Msa1426220:intron | 30.0% |
| ATTGAAATCTTGAATTGACG+AGG | + | tig0025956:34744-34763 | Msa1426220:intron | 30.0% | |
| TTGAAATCTTGAATTGACGA+GGG | + | tig0025956:34745-34764 | Msa1426220:intron | 30.0% | |
| GCTATAAATAGAAAACCATG+TGG | + | tig0025956:34847-34866 | Msa1426220:intron | 30.0% | |
| AATTAGTTCACTGGTAAAGA+AGG | - | tig0025956:34882-34901 | None:intergenic | 30.0% | |
| AGAAAAGAATACAGCATGAA+GGG | + | tig0025956:34930-34949 | Msa1426220:intron | 30.0% | |
| ! | CTAATTTTTATCAGACCTCT+AGG | + | tig0025956:34978-34997 | Msa1426220:intron | 30.0% |
| ! | GATTTTCCTAGTGAAGAAAA+AGG | - | tig0025956:35155-35174 | None:intergenic | 30.0% |
| !! | TATCTTTTTGAAGGTATGGT+TGG | + | tig0025956:35199-35218 | Msa1426220:intron | 30.0% |
| ATGGTTAGACAATCCAAAAA+TGG | + | tig0025956:35279-35298 | Msa1426220:CDS | 30.0% | |
| ! | CATATTATCACCACCATTTT+TGG | - | tig0025956:35295-35314 | None:intergenic | 30.0% |
| TAAGTGAGCAAGATATAAGA+GGG | - | tig0025956:35586-35605 | None:intergenic | 30.0% | |
| !! | ACTTACATCTATTAGCTCTA+AGG | + | tig0025956:35601-35620 | Msa1426220:intron | 30.0% |
| ! | TAAGCCTCTTTTATGTATTC+AGG | + | tig0025956:35882-35901 | Msa1426220:intron | 30.0% |
| ! | CTCTTTTATGTATTCAGGAT+GGG | + | tig0025956:35887-35906 | Msa1426220:intron | 30.0% |
| ATCTCATATGTCATCTATCT+GGG | + | tig0025956:36152-36171 | Msa1426220:CDS | 30.0% | |
| TCTATTATTCGTCATGAAGA+CGG | + | tig0025956:36216-36235 | Msa1426220:CDS | 30.0% | |
| GTTTAACCTTCATTGTTTCA+TGG | + | tig0025956:36373-36392 | Msa1426220:intron | 30.0% | |
| !! | ATGATACTTGTTATCTGCAT+CGG | - | tig0025956:36475-36494 | None:intergenic | 30.0% |
| ! | CATTTAGCCAAAGATTTTAC+TGG | + | tig0025956:36492-36511 | Msa1426220:CDS | 30.0% |
| !! | GATCTTTGAAATGTTTCCAT+TGG | + | tig0025956:36725-36744 | Msa1426220:intron | 30.0% |
| ATAAATAAGGAAAGATGAGG+TGG | - | tig0025956:36805-36824 | None:intergenic | 30.0% | |
| CTTCTTGTCAATTCCAAAAA+AGG | - | tig0025956:36978-36997 | None:intergenic | 30.0% | |
| !!! | CTTTTTTGGAATTGACAAGA+AGG | + | tig0025956:36976-36995 | Msa1426220:intron | 30.0% |
| ! | TTCAAAAATCGGTTCTAATC+GGG | - | tig0025956:37364-37383 | None:intergenic | 30.0% |
| ! | CTTCAAAAATCGGTTCTAAT+CGG | - | tig0025956:37365-37384 | None:intergenic | 30.0% |
| !!! | GAACCGATTTTTGAAGTTAA+CGG | + | tig0025956:37369-37388 | Msa1426220:intron | 30.0% |
| GTTCCGTTAACTTCAAAAAT+CGG | - | tig0025956:37375-37394 | None:intergenic | 30.0% | |
| TCTATCCTGCAAATAACTTA+AGG | - | tig0025956:37485-37504 | None:intergenic | 30.0% | |
| TTCAGTTTATGCCAATGATA+AGG | + | tig0025956:37599-37618 | Msa1426220:intron | 30.0% | |
| TCAGTTTATGCCAATGATAA+GGG | + | tig0025956:37600-37619 | Msa1426220:intron | 30.0% | |
| ACTCTTACTAACACTCTTAT+TGG | + | tig0025956:37883-37902 | Msa1426220:intron | 30.0% | |
| TCAATATGATTCCCAAACTT+TGG | + | tig0025956:37912-37931 | Msa1426220:intron | 30.0% | |
| AATAATAAGGAGCCAAAGAA+TGG | + | tig0025956:38060-38079 | Msa1426220:intron | 30.0% | |
| AAAACTTTGGCGTAAGAAAT+CGG | + | tig0025956:38406-38425 | Msa1426220:intron | 30.0% | |
| CTCAAATCGATGATAACTTA+TGG | + | tig0025956:38471-38490 | Msa1426220:intron | 30.0% | |
| TTGATACAGCCTAAAATTTC+TGG | + | tig0025956:38535-38554 | Msa1426220:intron | 30.0% | |
| ACTTATTGTGGGAATAACAA+TGG | - | tig0025956:38649-38668 | None:intergenic | 30.0% | |
| AAGAAAGAGGAACTTATTGT+GGG | - | tig0025956:38660-38679 | None:intergenic | 30.0% | |
| AAAGACAACATACAAGAAAG+AGG | - | tig0025956:38673-38692 | None:intergenic | 30.0% | |
| CAAAAAACTACAACATCATG+TGG | - | tig0025956:38783-38802 | None:intergenic | 30.0% | |
| CTACAATGAGTACATGATAA+GGG | - | tig0025956:38884-38903 | None:intergenic | 30.0% | |
| CATTGAATGAATCTTCATCG+TGG | + | tig0025956:30722-30741 | Msa1426220:five_prime_UTR | 35.0% | |
| ! | TCTTCCTTTTCCTTCGAATT+AGG | + | tig0025956:30766-30785 | Msa1426220:five_prime_UTR | 35.0% |
| ! | CTTCCTTTTCCTTCGAATTA+GGG | + | tig0025956:30767-30786 | Msa1426220:five_prime_UTR | 35.0% |
| AAACCCTAATTCGAAGGAAA+AGG | - | tig0025956:30773-30792 | None:intergenic | 35.0% | |
| ! | TTCTGAAAACCCTAATTCGA+AGG | - | tig0025956:30779-30798 | None:intergenic | 35.0% |
| ! | ACTGTGTCTTTTGGTGAATT+TGG | + | tig0025956:31339-31358 | Msa1426220:five_prime_UTR | 35.0% |
| AGCATGTGAGGAAGAAAAAA+TGG | + | tig0025956:31376-31395 | Msa1426220:exon | 35.0% | |
| ATGTGAGGAAGAAAAAATGG+AGG | + | tig0025956:31379-31398 | Msa1426220:exon | 35.0% | |
| !! | TGCTGTTTCTGTTCAAAATG+AGG | + | tig0025956:31451-31470 | Msa1426220:CDS | 35.0% |
| CCGTGTACAAAGTAAAAACA+AGG | + | tig0025956:31813-31832 | Msa1426220:CDS | 35.0% | |
| GAAAACTGAAAGGGTAAAAC+AGG | - | tig0025956:31858-31877 | None:intergenic | 35.0% | |
| TGAAACGCTATCATTAGGAA+GGG | - | tig0025956:31886-31905 | None:intergenic | 35.0% | |
| ATGAAACGCTATCATTAGGA+AGG | - | tig0025956:31887-31906 | None:intergenic | 35.0% | |
| AAGAAAAAGAGAGGTGAGAA+AGG | - | tig0025956:31941-31960 | None:intergenic | 35.0% | |
| TCTTGGTCCAGAATTATGTT+TGG | + | tig0025956:32022-32041 | Msa1426220:CDS | 35.0% | |
| TTGGCATCCAAACATAATTC+TGG | - | tig0025956:32032-32051 | None:intergenic | 35.0% | |
| TAACATACCTTTACTTCGAG+TGG | + | tig0025956:32089-32108 | Msa1426220:intron | 35.0% | |
| TAAACAACCACTCGAAGTAA+AGG | - | tig0025956:32099-32118 | None:intergenic | 35.0% | |
| GACCATCATCTATGAACATA+AGG | + | tig0025956:32198-32217 | Msa1426220:intron | 35.0% | |
| CCATCATCTATGAACATAAG+GGG | + | tig0025956:32200-32219 | Msa1426220:intron | 35.0% | |
| CGTGGCAATATATCATTGAA+TGG | - | tig0025956:32309-32328 | None:intergenic | 35.0% | |
| ACTAAGTTCCTTAGATGCAT+AGG | + | tig0025956:32448-32467 | Msa1426220:intron | 35.0% | |
| ACCAATTTCAGTCATACACA+GGG | - | tig0025956:32477-32496 | None:intergenic | 35.0% | |
| AACCAATTTCAGTCATACAC+AGG | - | tig0025956:32478-32497 | None:intergenic | 35.0% | |
| AGATGAGAAGAGAATGTTAC+TGG | + | tig0025956:32507-32526 | Msa1426220:intron | 35.0% | |
| ! | TATTTTTCCTCACTACTCTC+TGG | + | tig0025956:32663-32682 | Msa1426220:intron | 35.0% |
| CCATAAACATTCCTAATTGG+GGG | - | tig0025956:32699-32718 | None:intergenic | 35.0% | |
| CCCATAAACATTCCTAATTG+GGG | - | tig0025956:32700-32719 | None:intergenic | 35.0% | |
| CCCCAATTAGGAATGTTTAT+GGG | + | tig0025956:32697-32716 | Msa1426220:intron | 35.0% | |
| GCCCATAAACATTCCTAATT+GGG | - | tig0025956:32701-32720 | None:intergenic | 35.0% | |
| !!! | CAGGCCTTGTTAGTTTTTTA+CGG | + | tig0025956:32737-32756 | Msa1426220:intron | 35.0% |
| AAGTCCTCAGGATATTTGAA+TGG | - | tig0025956:32853-32872 | None:intergenic | 35.0% | |
| ! | CTCCCATTTTCTTTCTATGA+TGG | + | tig0025956:32930-32949 | Msa1426220:intron | 35.0% |
| TGAGAAAATTGGCTAAGCAA+GGG | - | tig0025956:33018-33037 | None:intergenic | 35.0% | |
| ATGAGAAAATTGGCTAAGCA+AGG | - | tig0025956:33019-33038 | None:intergenic | 35.0% | |
| ! | GGTCTTTATTGGAAAAGTAC+AGG | + | tig0025956:33320-33339 | Msa1426220:CDS | 35.0% |
| ! | TGCAAATAGTTGACTTACCA+AGG | - | tig0025956:33401-33420 | None:intergenic | 35.0% |
| AGAAATGCAAAAGTTTCCAG+CGG | - | tig0025956:33426-33445 | None:intergenic | 35.0% | |
| CAAATAACTCAAAACCTACG+AGG | + | tig0025956:33742-33761 | Msa1426220:CDS | 35.0% | |
| GTCATGTTCAACCTCATTTA+CGG | - | tig0025956:34022-34041 | None:intergenic | 35.0% | |
| !! | GAGTGATTTTGAGGAAATGT+GGG | - | tig0025956:34194-34213 | None:intergenic | 35.0% |
| !! | AGAGTGATTTTGAGGAAATG+TGG | - | tig0025956:34195-34214 | None:intergenic | 35.0% |
| GTTCATCAATTGGGAATAAC+TGG | - | tig0025956:34256-34275 | None:intergenic | 35.0% | |
| ! | TTGCTACAGTAAGATGCTTT+TGG | - | tig0025956:34319-34338 | None:intergenic | 35.0% |
| !! | GTATGGATTATGCTTTTCCT+AGG | - | tig0025956:34400-34419 | None:intergenic | 35.0% |
| ! | GGAAAAGCATAATCCATACT+TGG | + | tig0025956:34401-34420 | Msa1426220:intron | 35.0% |
| GAACATCTAAACCGTAAATG+GGG | + | tig0025956:34465-34484 | Msa1426220:CDS | 35.0% | |
| !!! | GAGTTGATGCTTTTTCCTTA+TGG | + | tig0025956:34510-34529 | Msa1426220:CDS | 35.0% |
| ! | TTTTCCTTATGGCGTTCAAA+AGG | + | tig0025956:34521-34540 | Msa1426220:CDS | 35.0% |
| ! | TTTTCCTTTTGAACGCCATA+AGG | - | tig0025956:34528-34547 | None:intergenic | 35.0% |
| AGATACCTCAAACGGAATAT+AGG | - | tig0025956:34627-34646 | None:intergenic | 35.0% | |
| TGGAAAAGAGATACCTCAAA+CGG | - | tig0025956:34635-34654 | None:intergenic | 35.0% | |
| ! | TCTTTTCCATGTTGCAATCT+TGG | + | tig0025956:34646-34665 | Msa1426220:intron | 35.0% |
| ACAAAACCAAGATTGCAACA+TGG | - | tig0025956:34655-34674 | None:intergenic | 35.0% | |
| !! | GTTTTGTTCATAGCCAAAGT+AGG | + | tig0025956:34668-34687 | Msa1426220:intron | 35.0% |
| ! | ATGGATTTTCACACCTACTT+TGG | - | tig0025956:34684-34703 | None:intergenic | 35.0% |
| CGAGGGAAAATTAAACAAGA+TGG | + | tig0025956:34762-34781 | Msa1426220:intron | 35.0% | |
| GAGAAAAGAATACAGCATGA+AGG | + | tig0025956:34929-34948 | Msa1426220:intron | 35.0% | |
| ! | GTTTCTCCTTTTTCTTCACT+AGG | + | tig0025956:35146-35165 | Msa1426220:intron | 35.0% |
| GTTAGACAATCCAAAAATGG+TGG | + | tig0025956:35282-35301 | Msa1426220:CDS | 35.0% | |
| AGTGTTAGGCAAATAAGTTG+AGG | - | tig0025956:35433-35452 | None:intergenic | 35.0% | |
| TATTTGCCTAACACTAGAGA+TGG | + | tig0025956:35438-35457 | Msa1426220:CDS | 35.0% | |
| ATACTTCCATCTCTAGTGTT+AGG | - | tig0025956:35447-35466 | None:intergenic | 35.0% | |
| ! | TTTTCCATGCGATGATATCT+GGG | - | tig0025956:35511-35530 | None:intergenic | 35.0% |
| GTAAGTGAGCAAGATATAAG+AGG | - | tig0025956:35587-35606 | None:intergenic | 35.0% | |
| ! | CATTATCTAAAACACAGGAG+AGG | - | tig0025956:35741-35760 | None:intergenic | 35.0% |
| ! | CACTGCTTTGAATTTCTGTT+TGG | + | tig0025956:35771-35790 | Msa1426220:intron | 35.0% |
| CCATCCTGAATACATAAAAG+AGG | - | tig0025956:35889-35908 | None:intergenic | 35.0% | |
| ! | CCTCTTTTATGTATTCAGGA+TGG | + | tig0025956:35886-35905 | Msa1426220:intron | 35.0% |
| TTGAAATCAACCAATGGATC+AGG | + | tig0025956:35910-35929 | Msa1426220:CDS | 35.0% | |
| CAAATGAGTCGCAACTAAAA+GGG | - | tig0025956:36071-36090 | None:intergenic | 35.0% | |
| TCAAATGAGTCGCAACTAAA+AGG | - | tig0025956:36072-36091 | None:intergenic | 35.0% | |
| ATCTAAACACCAAGACAAGA+TGG | + | tig0025956:36113-36132 | Msa1426220:CDS | 35.0% | |
| TCTAAACACCAAGACAAGAT+GGG | + | tig0025956:36114-36133 | Msa1426220:CDS | 35.0% | |
| CATCTCATATGTCATCTATC+TGG | + | tig0025956:36151-36170 | Msa1426220:CDS | 35.0% | |
| GAAGCAATGAGAGATAAACA+AGG | - | tig0025956:36243-36262 | None:intergenic | 35.0% | |
| AATCTGCCATGAAACAATGA+AGG | - | tig0025956:36382-36401 | None:intergenic | 35.0% | |
| TTTCTTGCGACAAGACAATT+TGG | + | tig0025956:36571-36590 | Msa1426220:intron | 35.0% | |
| ATTTGGACGAAGTTTATCTC+AGG | + | tig0025956:36588-36607 | Msa1426220:intron | 35.0% | |
| TTTGGACGAAGTTTATCTCA+GGG | + | tig0025956:36589-36608 | Msa1426220:intron | 35.0% | |
| ! | TGATGGATGGTTTAAATGCA+AGG | - | tig0025956:36650-36669 | None:intergenic | 35.0% |
| AGTATGTAAGACAACACCAA+TGG | - | tig0025956:36744-36763 | None:intergenic | 35.0% | |
| GATCCAATTCTAAGTGATAG+CGG | + | tig0025956:36905-36924 | Msa1426220:intron | 35.0% | |
| AAAAAAGGAGCAATTCTGGA+AGG | - | tig0025956:36963-36982 | None:intergenic | 35.0% | |
| !!! | TTCCAGAATTGCTCCTTTTT+TGG | + | tig0025956:36962-36981 | Msa1426220:intron | 35.0% |
| TTCCAAAAAAGGAGCAATTC+TGG | - | tig0025956:36967-36986 | None:intergenic | 35.0% | |
| !! | CTGGTAACGTTTTCTGATTT+CGG | + | tig0025956:37091-37110 | Msa1426220:intron | 35.0% |
| ATATACATCAGGAGTTGAAG+CGG | - | tig0025956:37192-37211 | None:intergenic | 35.0% | |
| TCTACACTGTATCTATCTCT+CGG | + | tig0025956:37266-37285 | Msa1426220:intron | 35.0% | |
| GAATGAGAGATAAACCAGAA+AGG | - | tig0025956:37339-37358 | None:intergenic | 35.0% | |
| ! | TCAAAAATCGGTTCTAATCG+GGG | - | tig0025956:37363-37382 | None:intergenic | 35.0% |
| !!! | TTTTCATTAACTTGGTGCAG+GGG | - | tig0025956:37422-37441 | None:intergenic | 35.0% |
| !!! | GTTTTCATTAACTTGGTGCA+GGG | - | tig0025956:37423-37442 | None:intergenic | 35.0% |
| !!! | AGTTTTCATTAACTTGGTGC+AGG | - | tig0025956:37424-37443 | None:intergenic | 35.0% |
| TCTCTCCTTAAGTTATTTGC+AGG | + | tig0025956:37477-37496 | Msa1426220:intron | 35.0% | |
| GTTATTTGCAGGATAGATCT+TGG | + | tig0025956:37488-37507 | Msa1426220:intron | 35.0% | |
| GTCATTTCTTCCCTTATCAT+TGG | - | tig0025956:37613-37632 | None:intergenic | 35.0% | |
| ! | GGAAGAAATGACATTTTGTG+AGG | + | tig0025956:37621-37640 | Msa1426220:intron | 35.0% |
| AATTGAGCAACTCTAGATGT+AGG | - | tig0025956:37748-37767 | None:intergenic | 35.0% | |
| GTTGCTCAATTTCTTGATCA+AGG | + | tig0025956:37757-37776 | Msa1426220:intron | 35.0% | |
| ! | AGGAATTCATCCCAGATTTT+TGG | + | tig0025956:37777-37796 | Msa1426220:intron | 35.0% |
| ! | GGAATTCATCCCAGATTTTT+GGG | + | tig0025956:37778-37797 | Msa1426220:intron | 35.0% |
| GAAGCATATCCCAAAAATCT+GGG | - | tig0025956:37790-37809 | None:intergenic | 35.0% | |
| TGAAGCATATCCCAAAAATC+TGG | - | tig0025956:37791-37810 | None:intergenic | 35.0% | |
| AACATGATTTCTTTGCTCCT+CGG | - | tig0025956:37825-37844 | None:intergenic | 35.0% | |
| ! | TGATTCCCAAACTTTGGAAA+TGG | + | tig0025956:37918-37937 | Msa1426220:intron | 35.0% |
| ! | GATTCCCAAACTTTGGAAAT+GGG | + | tig0025956:37919-37938 | Msa1426220:intron | 35.0% |
| TCGGTAACATTCACTTTCAT+TGG | - | tig0025956:37980-37999 | None:intergenic | 35.0% | |
| TGGGGATGAATCAATACTAA+AGG | + | tig0025956:38083-38102 | Msa1426220:intron | 35.0% | |
| GGGAAAATCAAAATGGTGAT+AGG | + | tig0025956:38183-38202 | Msa1426220:intron | 35.0% | |
| GGTTAATAATGAAGCGAGAA+TGG | + | tig0025956:38236-38255 | Msa1426220:intron | 35.0% | |
| TTTCTTCGGGAGAAATGAAT+AGG | - | tig0025956:38314-38333 | None:intergenic | 35.0% | |
| ! | CCAAGTTTGCCAGAAATTTT+AGG | - | tig0025956:38547-38566 | None:intergenic | 35.0% |
| !! | CCTAAAATTTCTGGCAAACT+TGG | + | tig0025956:38544-38563 | Msa1426220:intron | 35.0% |
| CAAGAAAGAGGAACTTATTG+TGG | - | tig0025956:38661-38680 | None:intergenic | 35.0% | |
| !!! | ATGGTTTTGTCGACTAAATG+TGG | - | tig0025956:38719-38738 | None:intergenic | 35.0% |
| ACCTAACGAAAAACCACAAA+TGG | + | tig0025956:38753-38772 | Msa1426220:intron | 35.0% | |
| CCTAACGAAAAACCACAAAT+GGG | + | tig0025956:38754-38773 | Msa1426220:intron | 35.0% | |
| GGAGATGGCAAATACATTAA+TGG | - | tig0025956:38820-38839 | None:intergenic | 35.0% | |
| ! | TGATAAGGGTTGGCATATAA+GGG | - | tig0025956:38870-38889 | None:intergenic | 35.0% |
| ! | ATGATAAGGGTTGGCATATA+AGG | - | tig0025956:38871-38890 | None:intergenic | 35.0% |
| AATGAGTACATGATAAGGGT+TGG | - | tig0025956:38880-38899 | None:intergenic | 35.0% | |
| GCTACAATGAGTACATGATA+AGG | - | tig0025956:38885-38904 | None:intergenic | 35.0% | |
| AGATCCATATCCATCTTGTT+GGG | - | tig0025956:38954-38973 | None:intergenic | 35.0% | |
| GAAGAATGAACGTTGACGAA+AGG | - | tig0025956:30816-30835 | None:intergenic | 40.0% | |
| TTCGTCAACGTTCATTCTTC+AGG | + | tig0025956:30816-30835 | Msa1426220:five_prime_UTR | 40.0% | |
| ! | TCTTAGGGAACTGTGTCTTT+TGG | + | tig0025956:31330-31349 | Msa1426220:intron | 40.0% |
| ! | TTGAATAGCAAGAGCATGTG+AGG | + | tig0025956:31364-31383 | Msa1426220:five_prime_UTR | 40.0% |
| TTGAACAGAAACAGCAGTCT+CGG | - | tig0025956:31447-31466 | None:intergenic | 40.0% | |
| CAAGAGATGTTGAAACACCA+GGG | - | tig0025956:31478-31497 | None:intergenic | 40.0% | |
| TTAAGCGTCAAAAACTGACC+TGG | - | tig0025956:31527-31546 | None:intergenic | 40.0% | |
| AAAGCTTCTTCACCGCATTA+CGG | + | tig0025956:31673-31692 | Msa1426220:CDS | 40.0% | |
| AGGGAATGGGAAAACTGAAA+GGG | - | tig0025956:31867-31886 | None:intergenic | 40.0% | |
| AAGGGAATGGGAAAACTGAA+AGG | - | tig0025956:31868-31887 | None:intergenic | 40.0% | |
| GCTATCATTAGGAAGGGAAT+GGG | - | tig0025956:31880-31899 | None:intergenic | 40.0% | |
| ! | TCACCTCTCTTTTTCTTTCG+TGG | + | tig0025956:31944-31963 | Msa1426220:intron | 40.0% |
| CATCCACGAAAGAAAAAGAG+AGG | - | tig0025956:31950-31969 | None:intergenic | 40.0% | |
| TTCTTTCGTGGATGACTTAC+AGG | + | tig0025956:31956-31975 | Msa1426220:intron | 40.0% | |
| !! | ATTACTATCGGCTTGTGAGA+CGG | + | tig0025956:31988-32007 | Msa1426220:CDS | 40.0% |
| AGACGGATGAACAAACATCT+TGG | + | tig0025956:32005-32024 | Msa1426220:CDS | 40.0% | |
| CCCCTTATGTTCATAGATGA+TGG | - | tig0025956:32203-32222 | None:intergenic | 40.0% | |
| GTCAAACTCTCAAACTAACG+TGG | - | tig0025956:32327-32346 | None:intergenic | 40.0% | |
| TACTTCATGAGATGTCAAGC+TGG | + | tig0025956:32361-32380 | Msa1426220:intron | 40.0% | |
| !! | AAACAGAAAGCACTTGGGAT+GGG | - | tig0025956:32558-32577 | None:intergenic | 40.0% |
| !! | GAGTGAAACAGAAAGCACTT+GGG | - | tig0025956:32563-32582 | None:intergenic | 40.0% |
| !! | TGAGTGAAACAGAAAGCACT+TGG | - | tig0025956:32564-32583 | None:intergenic | 40.0% |
| AGAGGAAGAAAACAAGAGGA+GGG | - | tig0025956:32611-32630 | None:intergenic | 40.0% | |
| AAGGAGAGGAAGAAAACAAG+AGG | - | tig0025956:32615-32634 | None:intergenic | 40.0% | |
| AGTAAGGATGTTACGAGCAA+AGG | - | tig0025956:32634-32653 | None:intergenic | 40.0% | |
| AACATTCCTAATTGGGGGTT+GGG | - | tig0025956:32694-32713 | None:intergenic | 40.0% | |
| AAACATTCCTAATTGGGGGT+TGG | - | tig0025956:32695-32714 | None:intergenic | 40.0% | |
| CCCCCAATTAGGAATGTTTA+TGG | + | tig0025956:32696-32715 | Msa1426220:intron | 40.0% | |
| GGCCCATAAACATTCCTAAT+TGG | - | tig0025956:32702-32721 | None:intergenic | 40.0% | |
| TTTATGGGCCGAAGAATCAA+GGG | + | tig0025956:32712-32731 | Msa1426220:intron | 40.0% | |
| GTCACCATTCAAATATCCTG+AGG | + | tig0025956:32846-32865 | Msa1426220:intron | 40.0% | |
| AGCTTACAATAGAAGTCCTC+AGG | - | tig0025956:32865-32884 | None:intergenic | 40.0% | |
| ! | TCTTTGTTTCCCTTGTCTCA+AGG | + | tig0025956:32884-32903 | Msa1426220:intron | 40.0% |
| ! | TTTTAAACCTACGGGGCTTT+AGG | - | tig0025956:33366-33385 | None:intergenic | 40.0% |
| AGCACCAACTATTGAAGGAT+CGG | + | tig0025956:33502-33521 | Msa1426220:CDS | 40.0% | |
| TCTTCCGATCCTTCAATAGT+TGG | - | tig0025956:33509-33528 | None:intergenic | 40.0% | |
| ! | TTTGAGACAGTGTTAAGACC+AGG | - | tig0025956:33576-33595 | None:intergenic | 40.0% |
| ! | TCAAATCAAGCTAGAGCATC+AGG | + | tig0025956:33591-33610 | Msa1426220:CDS | 40.0% |
| ! | CAAATCAAGCTAGAGCATCA+GGG | + | tig0025956:33592-33611 | Msa1426220:CDS | 40.0% |
| ATGTTCAACCTCATTTACGG+TGG | - | tig0025956:34019-34038 | None:intergenic | 40.0% | |
| AAATGAGGTTGAACATGACC+AGG | + | tig0025956:34023-34042 | Msa1426220:CDS | 40.0% | |
| TCACAGCATTGTTCTCATTG+GGG | - | tig0025956:34096-34115 | None:intergenic | 40.0% | |
| GTCACAGCATTGTTCTCATT+GGG | - | tig0025956:34097-34116 | None:intergenic | 40.0% | |
| AGTCACAGCATTGTTCTCAT+TGG | - | tig0025956:34098-34117 | None:intergenic | 40.0% | |
| ACAATGCTGTGACTTAACTC+TGG | + | tig0025956:34104-34123 | Msa1426220:intron | 40.0% | |
| TGAGGAAATGTGGGTAAAGA+GGG | - | tig0025956:34185-34204 | None:intergenic | 40.0% | |
| TTGAGGAAATGTGGGTAAAG+AGG | - | tig0025956:34186-34205 | None:intergenic | 40.0% | |
| ! | TTCGAGTGGGTTCATCAATT+GGG | - | tig0025956:34265-34284 | None:intergenic | 40.0% |
| ! | GGATTATGCTTTTCCTAGGA+GGG | - | tig0025956:34396-34415 | None:intergenic | 40.0% |
| ! | TGGATTATGCTTTTCCTAGG+AGG | - | tig0025956:34397-34416 | None:intergenic | 40.0% |
| CTAAGTGTAAGCTCCAAGTA+TGG | - | tig0025956:34417-34436 | None:intergenic | 40.0% | |
| GCTGATATATATGCAGCGAT+AGG | + | tig0025956:34594-34613 | Msa1426220:CDS | 40.0% | |
| TACCTCAAACGGAATATAGG+TGG | - | tig0025956:34624-34643 | None:intergenic | 40.0% | |
| AGAAGGAAAGATAACCCACA+TGG | - | tig0025956:34865-34884 | None:intergenic | 40.0% | |
| ! | GCTGTATTCTTTTCTCTAGC+AGG | - | tig0025956:34925-34944 | None:intergenic | 40.0% |
| GAAAAAACTTGGACTCTAGC+TGG | + | tig0025956:35035-35054 | Msa1426220:intron | 40.0% | |
| TGGTTCTCTTATACTGAGCA+TGG | + | tig0025956:35219-35238 | Msa1426220:CDS | 40.0% | |
| GGTTCTCTTATACTGAGCAT+GGG | + | tig0025956:35220-35239 | Msa1426220:CDS | 40.0% | |
| GTTCTCTTATACTGAGCATG+GGG | + | tig0025956:35221-35240 | Msa1426220:CDS | 40.0% | |
| GTGGTGATAATATGAACGAC+CGG | + | tig0025956:35301-35320 | Msa1426220:CDS | 40.0% | |
| !! | AAGAGCATCGTTTATGTTCG+TGG | - | tig0025956:35403-35422 | None:intergenic | 40.0% |
| ! | AGGCAAATAAGTTGAGGTAG+AGG | - | tig0025956:35427-35446 | None:intergenic | 40.0% |
| ! | ATACCATAATACAAGCACCG+AGG | + | tig0025956:35467-35486 | Msa1426220:CDS | 40.0% |
| ! | CTTTTCCATGCGATGATATC+TGG | - | tig0025956:35512-35531 | None:intergenic | 40.0% |
| CATGGAAAAGATGCTACAGA+TGG | + | tig0025956:35522-35541 | Msa1426220:CDS | 40.0% | |
| AACTAGACACTTGGAAGACA+TGG | + | tig0025956:35551-35570 | Msa1426220:CDS | 40.0% | |
| ! | TCTAAAACACAGGAGAGGTA+TGG | - | tig0025956:35736-35755 | None:intergenic | 40.0% |
| !! | GATGGGTTGAAATCAACCAA+TGG | + | tig0025956:35904-35923 | Msa1426220:CDS | 40.0% |
| AAGGGATTTGATGAACACTG+CGG | - | tig0025956:36053-36072 | None:intergenic | 40.0% | |
| ! | TATGAGATGCCAGAGTTGAT+TGG | - | tig0025956:36140-36159 | None:intergenic | 40.0% |
| TTTGAGCAATATCGTCCACA+AGG | - | tig0025956:36422-36441 | None:intergenic | 40.0% | |
| TGCTAGCCCAGTAAAATCTT+TGG | - | tig0025956:36502-36521 | None:intergenic | 40.0% | |
| !! | TGGGCTAGCAGATATGTATT+GGG | + | tig0025956:36512-36531 | Msa1426220:CDS | 40.0% |
| TTAGAATTGGATCATCGCTG+TGG | - | tig0025956:36898-36917 | None:intergenic | 40.0% | |
| AGTCCGCTATCACTTAGAAT+TGG | - | tig0025956:36911-36930 | None:intergenic | 40.0% | |
| CTCTTTACATCATTGCTTCC+TGG | + | tig0025956:37072-37091 | Msa1426220:intron | 40.0% | |
| CGAAATCAGAAAACGTTACC+AGG | - | tig0025956:37093-37112 | None:intergenic | 40.0% | |
| !! | AAGCGGCTAAAACCACTTTT+TGG | - | tig0025956:37175-37194 | None:intergenic | 40.0% |
| CTACACTGTATCTATCTCTC+GGG | + | tig0025956:37267-37286 | Msa1426220:intron | 40.0% | |
| TACACTGTATCTATCTCTCG+GGG | + | tig0025956:37268-37287 | Msa1426220:intron | 40.0% | |
| ! | GGACTTGTTTACTGGGTAAA+GGG | - | tig0025956:37318-37337 | None:intergenic | 40.0% |
| ! | AGGACTTGTTTACTGGGTAA+AGG | - | tig0025956:37319-37338 | None:intergenic | 40.0% |
| ! | CCAGAAAGGACTTGTTTACT+GGG | - | tig0025956:37325-37344 | None:intergenic | 40.0% |
| ! | ACCAGAAAGGACTTGTTTAC+TGG | - | tig0025956:37326-37345 | None:intergenic | 40.0% |
| GAAGTTAACGGAACTCTTTC+TGG | + | tig0025956:37381-37400 | Msa1426220:intron | 40.0% | |
| GGAACCCATTTCCAAAGTTT+GGG | - | tig0025956:37926-37945 | None:intergenic | 40.0% | |
| ! | GGAAATGGGTTCCCATAAAA+TGG | + | tig0025956:37933-37952 | Msa1426220:intron | 40.0% |
| ! | TGTGGAGCACACCATTTTAT+GGG | - | tig0025956:37947-37966 | None:intergenic | 40.0% |
| ! | ATGTGGAGCACACCATTTTA+TGG | - | tig0025956:37948-37967 | None:intergenic | 40.0% |
| AATAAGGAGCCAAAGAATGG+TGG | + | tig0025956:38063-38082 | Msa1426220:intron | 40.0% | |
| ATAAGGAGCCAAAGAATGGT+GGG | + | tig0025956:38064-38083 | Msa1426220:intron | 40.0% | |
| AAGCTCGATCATGCAACAAT+AGG | + | tig0025956:38162-38181 | Msa1426220:intron | 40.0% | |
| AGCTCGATCATGCAACAATA+GGG | + | tig0025956:38163-38182 | Msa1426220:intron | 40.0% | |
| AGAATGTGAAGAGAAGAGAG+TGG | + | tig0025956:38206-38225 | Msa1426220:intron | 40.0% | |
| GAATGTGAAGAGAAGAGAGT+GGG | + | tig0025956:38207-38226 | Msa1426220:intron | 40.0% | |
| AAGCGAGAATGGAGAAAAGA+GGG | + | tig0025956:38247-38266 | Msa1426220:intron | 40.0% | |
| GGAGAAATGAATAGGCCATT+GGG | - | tig0025956:38306-38325 | None:intergenic | 40.0% | |
| TGTGTCACACTTAACTAGCT+AGG | + | tig0025956:38345-38364 | Msa1426220:intron | 40.0% | |
| CTTCTTCGGGAGAAATGAAT+AGG | - | tig0025956:38385-38404 | None:intergenic | 40.0% | |
| CTATTCATTTCTCCCGAAGA+AGG | + | tig0025956:38312-38331 | Msa1426220:intron | 40.0% | |
| ! | ACGCCAAAGTTTTCCTTCTT+CGG | - | tig0025956:38399-38418 | None:intergenic | 40.0% |
| TGTATCAAGTTCGAAGGGTT+AGG | - | tig0025956:38523-38542 | None:intergenic | 40.0% | |
| TAGGCTGTATCAAGTTCGAA+GGG | - | tig0025956:38528-38547 | None:intergenic | 40.0% | |
| TTAGGCTGTATCAAGTTCGA+AGG | - | tig0025956:38529-38548 | None:intergenic | 40.0% | |
| CGATAGATTGTTGCCACATA+CGG | - | tig0025956:38591-38610 | None:intergenic | 40.0% | |
| ! | CCCATTTGTGGTTTTTCGTT+AGG | - | tig0025956:38757-38776 | None:intergenic | 40.0% |
| !! | CAGAAAAAAAGGCATCGTGA+AGG | - | tig0025956:38841-38860 | None:intergenic | 40.0% |
| AGTGGTTTGAGCAGCTTAAA+GGG | - | tig0025956:38921-38940 | None:intergenic | 40.0% | |
| TAGTGGTTTGAGCAGCTTAA+AGG | - | tig0025956:38922-38941 | None:intergenic | 40.0% | |
| GAGATCCATATCCATCTTGT+TGG | - | tig0025956:38955-38974 | None:intergenic | 40.0% | |
| GAGTTGCATCACACTTCTGA+TGG | + | tig0025956:31155-31174 | Msa1426220:intron | 45.0% | |
| TGCATCACACTTCTGATGGA+AGG | + | tig0025956:31159-31178 | Msa1426220:intron | 45.0% | |
| !! | TGTTTGGTGTCTGTGTGTCT+TGG | + | tig0025956:31244-31263 | Msa1426220:intron | 45.0% |
| TCTGTGTGTCTTGGCTTAGT+TGG | + | tig0025956:31253-31272 | Msa1426220:intron | 45.0% | |
| GGAAGAAAAAATGGAGGCTG+AGG | + | tig0025956:31385-31404 | Msa1426220:exon | 45.0% | |
| AGAAAAAATGGAGGCTGAGG+CGG | + | tig0025956:31388-31407 | Msa1426220:exon | 45.0% | |
| TCTGTTCAAAATGAGGACCC+TGG | + | tig0025956:31458-31477 | Msa1426220:CDS | 45.0% | |
| GCAAGAGATGTTGAAACACC+AGG | - | tig0025956:31479-31498 | None:intergenic | 45.0% | |
| TAGCTCCGAAGAAACCAACA+AGG | + | tig0025956:31619-31638 | Msa1426220:intron | 45.0% | |
| !! | CACTGCCTTGTTGGTTTCTT+CGG | - | tig0025956:31627-31646 | None:intergenic | 45.0% |
| GAAGAAACCAACAAGGCAGT+GGG | + | tig0025956:31626-31645 | Msa1426220:CDS | 45.0% | |
| CGCTATCATTAGGAAGGGAA+TGG | - | tig0025956:31881-31900 | None:intergenic | 45.0% | |
| TCGTGGATGACTTACAGGTT+AGG | + | tig0025956:31961-31980 | Msa1426220:intron | 45.0% | |
| GCCCTGTGTATGACTGAAAT+TGG | + | tig0025956:32473-32492 | Msa1426220:intron | 45.0% | |
| ! | ATGGGTGAGAGGTTTTTGTG+CGG | - | tig0025956:32540-32559 | None:intergenic | 45.0% |
| !! | GAAACAGAAAGCACTTGGGA+TGG | - | tig0025956:32559-32578 | None:intergenic | 45.0% |
| AGGAAGAAAACAAGAGGAGG+GGG | - | tig0025956:32609-32628 | None:intergenic | 45.0% | |
| GAGGAAGAAAACAAGAGGAG+GGG | - | tig0025956:32610-32629 | None:intergenic | 45.0% | |
| GAGAGGAAGAAAACAAGAGG+AGG | - | tig0025956:32612-32631 | None:intergenic | 45.0% | |
| GTTTATGGGCCGAAGAATCA+AGG | + | tig0025956:32711-32730 | Msa1426220:intron | 45.0% | |
| TTATGGGCCGAAGAATCAAG+GGG | + | tig0025956:32713-32732 | Msa1426220:intron | 45.0% | |
| TGTTTCCCTTGTCTCAAGGT+AGG | + | tig0025956:32888-32907 | Msa1426220:intron | 45.0% | |
| GTTTCCCTTGTCTCAAGGTA+GGG | + | tig0025956:32889-32908 | Msa1426220:intron | 45.0% | |
| TTTCCCTTGTCTCAAGGTAG+GGG | + | tig0025956:32890-32909 | Msa1426220:intron | 45.0% | |
| AAGGAGAAGCCAGAATAGCA+TGG | - | tig0025956:33061-33080 | None:intergenic | 45.0% | |
| ACTTATCTGACCTGTGACAC+AGG | + | tig0025956:33296-33315 | Msa1426220:intron | 45.0% | |
| ATAAAGACCACCTGTGTCAC+AGG | - | tig0025956:33309-33328 | None:intergenic | 45.0% | |
| GTGACACAGGTGGTCTTTAT+TGG | + | tig0025956:33309-33328 | Msa1426220:intron | 45.0% | |
| GTCAACTATTTGCATTCCGC+TGG | + | tig0025956:33407-33426 | Msa1426220:intron | 45.0% | |
| ! | CAATAGTTGGTGCTCCTTCA+TGG | - | tig0025956:33496-33515 | None:intergenic | 45.0% |
| !! | GAAGGAGCACCAACTATTGA+AGG | + | tig0025956:33497-33516 | Msa1426220:intron | 45.0% |
| ! | AGGATCGGAAGAAGAGTGTA+AGG | + | tig0025956:33517-33536 | Msa1426220:CDS | 45.0% |
| TGACAATTTCCACCCTGCAA+AGG | - | tig0025956:33549-33568 | None:intergenic | 45.0% | |
| CGCTTCAATGGTGGTTTAGA+AGG | - | tig0025956:33678-33697 | None:intergenic | 45.0% | |
| ATGCTCACATTGCGCTTCAA+TGG | - | tig0025956:33690-33709 | None:intergenic | 45.0% | |
| ATTGAAGCGCAATGTGAGCA+TGG | + | tig0025956:33689-33708 | Msa1426220:CDS | 45.0% | |
| TTGAAGCGCAATGTGAGCAT+GGG | + | tig0025956:33690-33709 | Msa1426220:CDS | 45.0% | |
| TGTTAACCGTAGCAGTGCTA+AGG | + | tig0025956:33713-33732 | Msa1426220:CDS | 45.0% | |
| GTTAACCGTAGCAGTGCTAA+GGG | + | tig0025956:33714-33733 | Msa1426220:CDS | 45.0% | |
| AATCTCCCTTAGCACTGCTA+CGG | - | tig0025956:33722-33741 | None:intergenic | 45.0% | |
| CTACAACTGTGATAGCTACC+TGG | - | tig0025956:34054-34073 | None:intergenic | 45.0% | |
| GCATTGTTCTCATTGGGGTA+AGG | - | tig0025956:34091-34110 | None:intergenic | 45.0% | |
| ! | GGATCAGAACATTTTTCCCC+TGG | - | tig0025956:34146-34165 | None:intergenic | 45.0% |
| ! | CTTCGAGTGGGTTCATCAAT+TGG | - | tig0025956:34266-34285 | None:intergenic | 45.0% |
| ATTTCCAAGGCTCTTCGAGT+GGG | - | tig0025956:34278-34297 | None:intergenic | 45.0% | |
| TCTCGTACTCACCATTTCCA+AGG | - | tig0025956:34291-34310 | None:intergenic | 45.0% | |
| ! | TCCTCTTTCTTTTCCCTCCT+AGG | + | tig0025956:34380-34399 | Msa1426220:intron | 45.0% |
| TCCTAGGAGGGAAAAGAAAG+AGG | - | tig0025956:34384-34403 | None:intergenic | 45.0% | |
| TGCTTGAATCGCCCCATTTA+CGG | - | tig0025956:34479-34498 | None:intergenic | 45.0% | |
| GTCCACCTATATTCCGTTTG+AGG | + | tig0025956:34619-34638 | Msa1426220:CDS | 45.0% | |
| GACCTTATTCCATGCACACA+AGG | - | tig0025956:34956-34975 | None:intergenic | 45.0% | |
| ! | GTGATGGCGAATTCACAATC+CGG | - | tig0025956:35323-35342 | None:intergenic | 45.0% |
| !! | GTTGATGGCATAGGAAGTGA+TGG | - | tig0025956:35339-35358 | None:intergenic | 45.0% |
| ACAGTCTACATAGTGCTCCT+TGG | - | tig0025956:35373-35392 | None:intergenic | 45.0% | |
| !! | AAGGAGCACTATGTAGACTG+TGG | + | tig0025956:35372-35391 | Msa1426220:CDS | 45.0% |
| TGGAGCTGTAACTAGACACT+TGG | + | tig0025956:35542-35561 | Msa1426220:CDS | 45.0% | |
| ! | TTTTCATTTCCTGGGGACTG+TGG | + | tig0025956:35704-35723 | Msa1426220:intron | 45.0% |
| ACCCTTACCAACATTAGCGT+GGG | + | tig0025956:35958-35977 | Msa1426220:CDS | 45.0% | |
| GCAGTTATCGTTGTGATCCT+GGG | - | tig0025956:36004-36023 | None:intergenic | 45.0% | |
| TGCAGTTATCGTTGTGATCC+TGG | - | tig0025956:36005-36024 | None:intergenic | 45.0% | |
| ! | TTGATTGGCCCATCTTGTCT+TGG | - | tig0025956:36125-36144 | None:intergenic | 45.0% |
| ACCTGAAAAAGAGAGCCTTG+TGG | + | tig0025956:36404-36423 | Msa1426220:CDS | 45.0% | |
| ! | TCCACAAGGCTCTCTTTTTC+AGG | - | tig0025956:36408-36427 | None:intergenic | 45.0% |
| TCAAACAGACCCTTTGCCTA+TGG | + | tig0025956:36437-36456 | Msa1426220:CDS | 45.0% | |
| !! | CTGGGCTAGCAGATATGTAT+TGG | + | tig0025956:36511-36530 | Msa1426220:CDS | 45.0% |
| GATGGTATTTCCAAGTCCAG+CGG | - | tig0025956:36866-36885 | None:intergenic | 45.0% | |
| TCGCTGTGGTACTTAGTAGA+TGG | - | tig0025956:36884-36903 | None:intergenic | 45.0% | |
| CCCAGTAAACAAGTCCTTTC+TGG | + | tig0025956:37322-37341 | Msa1426220:intron | 45.0% | |
| GGGAACCCATTTCCAAAGTT+TGG | - | tig0025956:37927-37946 | None:intergenic | 45.0% | |
| TAAGGAGCCAAAGAATGGTG+GGG | + | tig0025956:38065-38084 | Msa1426220:intron | 45.0% | |
| GATTCATCCCCACCATTCTT+TGG | - | tig0025956:38075-38094 | None:intergenic | 45.0% | |
| !! | TGATCGAGCTTTTCAGGCAA+AGG | - | tig0025956:38153-38172 | None:intergenic | 45.0% |
| ! | GTTGCATGATCGAGCTTTTC+AGG | - | tig0025956:38159-38178 | None:intergenic | 45.0% |
| AGAGAAGAGAGTGGGAGTTA+AGG | + | tig0025956:38215-38234 | Msa1426220:intron | 45.0% | |
| GAAGCGAGAATGGAGAAAAG+AGG | + | tig0025956:38246-38265 | Msa1426220:intron | 45.0% | |
| ACTACCTTTCTCGAACCCAA+TGG | + | tig0025956:38288-38307 | Msa1426220:intron | 45.0% | |
| GGGAGAAATGAATAGGCCAT+TGG | - | tig0025956:38307-38326 | None:intergenic | 45.0% | |
| CACACTTAACTAGCTAGGCA+TGG | + | tig0025956:38350-38369 | Msa1426220:intron | 45.0% | |
| CTCCCGAAGAAGGAAAACTT+TGG | + | tig0025956:38393-38412 | Msa1426220:intron | 45.0% | |
| ! | CGCCAAAGTTTTCCTTCTTC+GGG | - | tig0025956:38398-38417 | None:intergenic | 45.0% |
| ! | GGGAATAACAATGGCATCGA+AGG | - | tig0025956:38640-38659 | None:intergenic | 45.0% |
| ATCATGTGGCATCCCATTTG+TGG | - | tig0025956:38769-38788 | None:intergenic | 45.0% | |
| !! | AAAAGGCATCGTGAAGGAGA+TGG | - | tig0025956:38835-38854 | None:intergenic | 45.0% |
| ! | AAGGGCGCACACAGAAAAAA+AGG | - | tig0025956:38852-38871 | None:intergenic | 45.0% |
| GGAACCCAACAAGATGGATA+TGG | + | tig0025956:38947-38966 | Msa1426220:CDS | 45.0% | |
| !! | TAATATATATTATTATGAAA+TGG | - | tig0025956:33843-33862 | None:intergenic | 5.0% |
| ATCCGCGTCAGTGTTGTGTT+TGG | + | tig0025956:31228-31247 | Msa1426220:intron | 50.0% | |
| CACCAAACACAACACTGACG+CGG | - | tig0025956:31233-31252 | None:intergenic | 50.0% | |
| ! | TGCAGCTCAGGCGTGATTTT+TGG | + | tig0025956:31277-31296 | Msa1426220:intron | 50.0% |
| GTTATTATGCCACAGCAGCC+AGG | + | tig0025956:31506-31525 | Msa1426220:CDS | 50.0% | |
| AAAAACTGACCTGGCTGCTG+TGG | - | tig0025956:31518-31537 | None:intergenic | 50.0% | |
| CGAAGAAACCAACAAGGCAG+TGG | + | tig0025956:31625-31644 | Msa1426220:CDS | 50.0% | |
| TGCTTGGACTCGTAATGAGG+AGG | + | tig0025956:31650-31669 | Msa1426220:CDS | 50.0% | |
| TTCACCGCATTACGGCAAGT+TGG | + | tig0025956:31681-31700 | Msa1426220:CDS | 50.0% | |
| TCACCGCATTACGGCAAGTT+GGG | + | tig0025956:31682-31701 | Msa1426220:CDS | 50.0% | |
| CTTCCCAACTTGCCGTAATG+CGG | - | tig0025956:31688-31707 | None:intergenic | 50.0% | |
| !! | CCAACGAAGCATTGCAGCAT+TGG | - | tig0025956:32069-32088 | None:intergenic | 50.0% |
| CCAATGCTGCAATGCTTCGT+TGG | + | tig0025956:32066-32085 | Msa1426220:CDS | 50.0% | |
| CAGGGCTACCTATGCATCTA+AGG | - | tig0025956:32459-32478 | None:intergenic | 50.0% | |
| AAACAAGAGGAGGGGGGAAA+AGG | - | tig0025956:32602-32621 | None:intergenic | 50.0% | |
| GGAAGAAAACAAGAGGAGGG+GGG | - | tig0025956:32608-32627 | None:intergenic | 50.0% | |
| GGATGTTACGAGCAAAGGAG+AGG | - | tig0025956:32629-32648 | None:intergenic | 50.0% | |
| GGTACTACCAGAGAGTAGTG+AGG | - | tig0025956:32673-32692 | None:intergenic | 50.0% | |
| GTAGTACCCAACCCCCAATT+AGG | + | tig0025956:32685-32704 | Msa1426220:intron | 50.0% | |
| TATCTCATCCTCCTGCCACT+TGG | + | tig0025956:32970-32989 | Msa1426220:intron | 50.0% | |
| AAAGTACGGGCTCAGCTAGA+AGG | - | tig0025956:33080-33099 | None:intergenic | 50.0% | |
| TATCTGACCTGTGACACAGG+TGG | + | tig0025956:33299-33318 | Msa1426220:intron | 50.0% | |
| !! | GGGCTTTAGGTGAAGCTTTG+AGG | - | tig0025956:33353-33372 | None:intergenic | 50.0% |
| TGTAAGGAAGCGACCTTTGC+AGG | + | tig0025956:33533-33552 | Msa1426220:CDS | 50.0% | |
| GTAAGGAAGCGACCTTTGCA+GGG | + | tig0025956:33534-33553 | Msa1426220:CDS | 50.0% | |
| GGTGGAAATTGTCAACCTCC+TGG | + | tig0025956:33555-33574 | Msa1426220:CDS | 50.0% | |
| GAGACAGTGTTAAGACCAGG+AGG | - | tig0025956:33573-33592 | None:intergenic | 50.0% | |
| CTCACATTGCGCTTCAATGG+TGG | - | tig0025956:33687-33706 | None:intergenic | 50.0% | |
| GATTTCTTTCGCTGCCTCGT+AGG | - | tig0025956:33759-33778 | None:intergenic | 50.0% | |
| ACGAGGCAGCGAAAGAAATC+TGG | + | tig0025956:33759-33778 | Msa1426220:CDS | 50.0% | |
| GAACATGACCAGGAGAATCC+AGG | + | tig0025956:34033-34052 | Msa1426220:CDS | 50.0% | |
| GATAGCTACCTGGATTCTCC+TGG | - | tig0025956:34044-34063 | None:intergenic | 50.0% | |
| GAAATGTGGGTAAAGAGGGC+AGG | - | tig0025956:34181-34200 | None:intergenic | 50.0% | |
| CATTTCCAAGGCTCTTCGAG+TGG | - | tig0025956:34279-34298 | None:intergenic | 50.0% | |
| CACTCGAAGAGCCTTGGAAA+TGG | + | tig0025956:34277-34296 | Msa1426220:CDS | 50.0% | |
| GGCGATTCAAGCATAGCAGT+TGG | + | tig0025956:34486-34505 | Msa1426220:CDS | 50.0% | |
| CTGCGCTAAGAGTAGATTCC+TGG | - | tig0025956:34575-34594 | None:intergenic | 50.0% | |
| ! | GGCCTTGTGTGCATGGAATA+AGG | + | tig0025956:34951-34970 | Msa1426220:intron | 50.0% |
| GGATTGTCTAACCATGCAGC+TGG | - | tig0025956:35274-35293 | None:intergenic | 50.0% | |
| !! | GCTCCTCGGTGCTTGTATTA+TGG | - | tig0025956:35473-35492 | None:intergenic | 50.0% |
| TGCGATGATATCTGGGCTGT+AGG | - | tig0025956:35504-35523 | None:intergenic | 50.0% | |
| ACAGCCCAGATATCATCGCA+TGG | + | tig0025956:35504-35523 | Msa1426220:CDS | 50.0% | |
| CACCCTTACCAACATTAGCG+TGG | + | tig0025956:35957-35976 | Msa1426220:CDS | 50.0% | |
| ! | CCCCACGCTAATGTTGGTAA+GGG | - | tig0025956:35962-35981 | None:intergenic | 50.0% |
| CCCTTACCAACATTAGCGTG+GGG | + | tig0025956:35959-35978 | Msa1426220:CDS | 50.0% | |
| CCTTACCAACATTAGCGTGG+GGG | + | tig0025956:35960-35979 | Msa1426220:CDS | 50.0% | |
| CAAGATGGGCCAATCAACTC+TGG | + | tig0025956:36128-36147 | Msa1426220:CDS | 50.0% | |
| ACAGACCCTTTGCCTATGGA+CGG | + | tig0025956:36441-36460 | Msa1426220:CDS | 50.0% | |
| CACAACCGTCCATAGGCAAA+GGG | - | tig0025956:36449-36468 | None:intergenic | 50.0% | |
| TCACAACCGTCCATAGGCAA+AGG | - | tig0025956:36450-36469 | None:intergenic | 50.0% | |
| TGTGTGGCAGCCTGATTCTT+TGG | + | tig0025956:36838-36857 | Msa1426220:intron | 50.0% | |
| GTGTGGCAGCCTGATTCTTT+GGG | + | tig0025956:36839-36858 | Msa1426220:intron | 50.0% | |
| !! | AGCAATTCTGGAAGGCATCC+AGG | - | tig0025956:36955-36974 | None:intergenic | 50.0% |
| GGAAACACCATCGACAGTTG+AGG | + | tig0025956:36997-37016 | Msa1426220:intron | 50.0% | |
| TCTTGAGCCTCAACTGTCGA+TGG | - | tig0025956:37007-37026 | None:intergenic | 50.0% | |
| GCTTCAAGCAATAGAAGCCG+AGG | + | tig0025956:37805-37824 | Msa1426220:intron | 50.0% | |
| TAGGCCATTGGGTTCGAGAA+AGG | - | tig0025956:38295-38314 | None:intergenic | 50.0% | |
| CTAGCTAGGCATGGACACAA+TGG | + | tig0025956:38359-38378 | Msa1426220:intron | 50.0% | |
| GTGTGCACACCAGAGATAGT+GGG | + | tig0025956:38610-38629 | Msa1426220:intron | 50.0% | |
| ! | TAGGTGTCATACGCGCAAGA+TGG | - | tig0025956:38738-38757 | None:intergenic | 50.0% |
| AGCTGCTCAAACCACTACCA+AGG | + | tig0025956:38925-38944 | Msa1426220:CDS | 50.0% | |
| GCTGCTCAAACCACTACCAA+GGG | + | tig0025956:38926-38945 | Msa1426220:CDS | 50.0% | |
| TTGTTGGGTTCCCTTGGTAG+TGG | - | tig0025956:38939-38958 | None:intergenic | 50.0% | |
| ACCAAGGGAACCCAACAAGA+TGG | + | tig0025956:38941-38960 | Msa1426220:CDS | 50.0% | |
| TCCATCTTGTTGGGTTCCCT+TGG | - | tig0025956:38945-38964 | None:intergenic | 50.0% | |
| ! | CTTCTGATGGAAGGCGTGTC+TGG | + | tig0025956:31168-31187 | Msa1426220:intron | 55.0% |
| GGCTTAGTTGGATGCAGCTC+AGG | + | tig0025956:31265-31284 | Msa1426220:intron | 55.0% | |
| GGCTGCTTGGACTCGTAATG+AGG | + | tig0025956:31647-31666 | Msa1426220:CDS | 55.0% | |
| ! | CGCATTACGGCAAGTTGGGA+AGG | + | tig0025956:31686-31705 | Msa1426220:CDS | 55.0% |
| AAGCACTTGGGATGGGTGAG+AGG | - | tig0025956:32551-32570 | None:intergenic | 55.0% | |
| GGCCTGACCCCTTGATTCTT+CGG | - | tig0025956:32723-32742 | None:intergenic | 55.0% | |
| GCTCCCCTACCTTGAGACAA+GGG | - | tig0025956:32896-32915 | None:intergenic | 55.0% | |
| TGCTCCCCTACCTTGAGACA+AGG | - | tig0025956:32897-32916 | None:intergenic | 55.0% | |
| ACTTCGACCACCTGACCAAG+TGG | - | tig0025956:32988-33007 | None:intergenic | 55.0% | |
| AGCTTCACCTAAAGCCCCGT+AGG | + | tig0025956:33356-33375 | Msa1426220:CDS | 55.0% | |
| TGGGAGAAGGCTGCAATTGC+TGG | + | tig0025956:33949-33968 | Msa1426220:CDS | 55.0% | |
| TGCAGATGCTGCCGAGCATT+TGG | + | tig0025956:33984-34003 | Msa1426220:CDS | 55.0% | |
| TGAACCCACTCGAAGAGCCT+TGG | + | tig0025956:34271-34290 | Msa1426220:CDS | 55.0% | |
| ! | CATGAAGGGCCTTGTGTGCA+TGG | + | tig0025956:34944-34963 | Msa1426220:intron | 55.0% |
| ACCTGTAGCATCCAGCTGCA+TGG | + | tig0025956:35260-35279 | Msa1426220:CDS | 55.0% | |
| ACCATGCAGCTGGATGCTAC+AGG | - | tig0025956:35264-35283 | None:intergenic | 55.0% | |
| TGTAGGTCCACAAGGCTCCT+CGG | - | tig0025956:35487-35506 | None:intergenic | 55.0% | |
| ATCTGGGCTGTAGGTCCACA+AGG | - | tig0025956:35495-35514 | None:intergenic | 55.0% | |
| TGGTAAAGACCACAGTCCCC+AGG | - | tig0025956:35716-35735 | None:intergenic | 55.0% | |
| AGCTGACAGGCCTGATCCAT+TGG | - | tig0025956:35923-35942 | None:intergenic | 55.0% | |
| AATGGATCAGGCCTGTCAGC+TGG | + | tig0025956:35922-35941 | Msa1426220:CDS | 55.0% | |
| CCCCCACGCTAATGTTGGTA+AGG | - | tig0025956:35963-35982 | None:intergenic | 55.0% | |
| TAGGTCCCCCACGCTAATGT+TGG | - | tig0025956:35968-35987 | None:intergenic | 55.0% | |
| CCTGGGACACTCCTGAAAGT+AGG | - | tig0025956:35987-36006 | None:intergenic | 55.0% | |
| !! | CCTACTTTCAGGAGTGTCCC+AGG | + | tig0025956:35984-36003 | Msa1426220:CDS | 55.0% |
| TCGGACTCACAACCGTCCAT+AGG | - | tig0025956:36456-36475 | None:intergenic | 55.0% | |
| TCCAGCGGTCCCAAAGAATC+AGG | - | tig0025956:36851-36870 | None:intergenic | 55.0% | |
| !! | TTCTTTGGGACCGCTGGACT+TGG | + | tig0025956:36853-36872 | Msa1426220:CDS | 55.0% |
| GAGGTGCGCATGCCAAAAAG+TGG | + | tig0025956:37160-37179 | Msa1426220:intron | 55.0% | |
| CGCAAGTGAGATGCCGTATG+TGG | + | tig0025956:38575-38594 | Msa1426220:intron | 55.0% | |
| CGTGTGCACACCAGAGATAG+TGG | + | tig0025956:38609-38628 | Msa1426220:intron | 55.0% | |
| !! | GAAGGTGCTCCCACTATCTC+TGG | - | tig0025956:38622-38641 | None:intergenic | 55.0% |
| CAAGCAGCCCACTGCCTTGT+TGG | - | tig0025956:31636-31655 | None:intergenic | 60.0% | |
| !! | CAACAAGGCAGTGGGCTGCT+TGG | + | tig0025956:31634-31653 | Msa1426220:CDS | 60.0% |
| GGCCGAAGAATCAAGGGGTC+AGG | + | tig0025956:32718-32737 | Msa1426220:intron | 60.0% | |
| ! | CATCCTCCTGCCACTTGGTC+AGG | + | tig0025956:32975-32994 | Msa1426220:intron | 60.0% |
| AGGAAGCGACCTTTGCAGGG+TGG | + | tig0025956:33537-33556 | Msa1426220:CDS | 60.0% | |
| GGCAGCTCGCTCCAAATGCT+CGG | - | tig0025956:33998-34017 | None:intergenic | 60.0% | |
| GCGAGCTGCCACCGTAAATG+AGG | + | tig0025956:34008-34027 | Msa1426220:CDS | 60.0% | |
| GAGGGCAGGACATGATCAGC+AGG | - | tig0025956:34167-34186 | None:intergenic | 60.0% | |
| !! | ACAAGCACCGAGGAGCCTTG+TGG | + | tig0025956:35477-35496 | Msa1426220:CDS | 60.0% |
| AGGCCTGTCAGCTGGTGAGT+GGG | + | tig0025956:35930-35949 | Msa1426220:CDS | 60.0% | |
| AGCGTGGGGGACCTACTTTC+AGG | + | tig0025956:35973-35992 | Msa1426220:CDS | 60.0% | |
| !! | GCCTGATTCTTTGGGACCGC+TGG | + | tig0025956:36847-36866 | Msa1426220:intron | 60.0% |
| ! | TCGCTTGATAGCCAGCAGCC+TGG | + | tig0025956:36934-36953 | Msa1426220:intron | 60.0% |
| CCACCTGACCAAGTGGCAGG+AGG | - | tig0025956:32981-33000 | None:intergenic | 65.0% | |
| ! | CCTCCTGCCACTTGGTCAGG+TGG | + | tig0025956:32978-32997 | Msa1426220:intron | 65.0% |
| CGACCACCTGACCAAGTGGC+AGG | - | tig0025956:32984-33003 | None:intergenic | 65.0% | |
| CAGGCCTGTCAGCTGGTGAG+TGG | + | tig0025956:35929-35948 | Msa1426220:CDS | 65.0% | |
| CAGCCCACTCACCAGCTGAC+AGG | - | tig0025956:35936-35955 | None:intergenic | 65.0% | |
| !! | CTGGAAGGCATCCAGGCTGC+TGG | - | tig0025956:36948-36967 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0025956 | gene | 30695 | 38983 | 30695 | ID=Msa1426220;Name=Msa1426220 |
| tig0025956 | mRNA | 30695 | 38983 | 30695 | ID=Msa1426220-mRNA-1;Parent=Msa1426220;Name=Msa1426220-mRNA-1;_AED=0.13;_eAED=0.13;_QI=202|0.92|0.86|0.93|0.92|0.86|15|0|774 |
| tig0025956 | exon | 30695 | 30837 | 30695 | ID=Msa1426220-mRNA-1:exon:4743;Parent=Msa1426220-mRNA-1 |
| tig0025956 | exon | 31336 | 31527 | 31336 | ID=Msa1426220-mRNA-1:exon:4744;Parent=Msa1426220-mRNA-1 |
| tig0025956 | exon | 31622 | 31707 | 31622 | ID=Msa1426220-mRNA-1:exon:4745;Parent=Msa1426220-mRNA-1 |
| tig0025956 | exon | 31793 | 31840 | 31793 | ID=Msa1426220-mRNA-1:exon:4746;Parent=Msa1426220-mRNA-1 |
| tig0025956 | exon | 31978 | 32087 | 31978 | ID=Msa1426220-mRNA-1:exon:4747;Parent=Msa1426220-mRNA-1 |
| tig0025956 | exon | 33318 | 33402 | 33318 | ID=Msa1426220-mRNA-1:exon:4748;Parent=Msa1426220-mRNA-1 |
| tig0025956 | exon | 33501 | 33780 | 33501 | ID=Msa1426220-mRNA-1:exon:4749;Parent=Msa1426220-mRNA-1 |
| tig0025956 | exon | 33920 | 34054 | 33920 | ID=Msa1426220-mRNA-1:exon:4750;Parent=Msa1426220-mRNA-1 |
| tig0025956 | exon | 34147 | 34298 | 34147 | ID=Msa1426220-mRNA-1:exon:4751;Parent=Msa1426220-mRNA-1 |
| tig0025956 | exon | 34402 | 34640 | 34402 | ID=Msa1426220-mRNA-1:exon:4752;Parent=Msa1426220-mRNA-1 |
| tig0025956 | exon | 35212 | 35572 | 35212 | ID=Msa1426220-mRNA-1:exon:4753;Parent=Msa1426220-mRNA-1 |
| tig0025956 | exon | 35904 | 36314 | 35904 | ID=Msa1426220-mRNA-1:exon:4754;Parent=Msa1426220-mRNA-1 |
| tig0025956 | exon | 36399 | 36533 | 36399 | ID=Msa1426220-mRNA-1:exon:4755;Parent=Msa1426220-mRNA-1 |
| tig0025956 | exon | 36848 | 36917 | 36848 | ID=Msa1426220-mRNA-1:exon:4756;Parent=Msa1426220-mRNA-1 |
| tig0025956 | exon | 38904 | 38983 | 38904 | ID=Msa1426220-mRNA-1:exon:4757;Parent=Msa1426220-mRNA-1 |
| tig0025956 | five_prime_UTR | 30695 | 30837 | 30695 | ID=Msa1426220-mRNA-1:five_prime_utr;Parent=Msa1426220-mRNA-1 |
| tig0025956 | five_prime_UTR | 31336 | 31394 | 31336 | ID=Msa1426220-mRNA-1:five_prime_utr;Parent=Msa1426220-mRNA-1 |
| tig0025956 | CDS | 31395 | 31527 | 31395 | ID=Msa1426220-mRNA-1:cds;Parent=Msa1426220-mRNA-1 |
| tig0025956 | CDS | 31622 | 31707 | 31622 | ID=Msa1426220-mRNA-1:cds;Parent=Msa1426220-mRNA-1 |
| tig0025956 | CDS | 31793 | 31840 | 31793 | ID=Msa1426220-mRNA-1:cds;Parent=Msa1426220-mRNA-1 |
| tig0025956 | CDS | 31978 | 32087 | 31978 | ID=Msa1426220-mRNA-1:cds;Parent=Msa1426220-mRNA-1 |
| tig0025956 | CDS | 33318 | 33402 | 33318 | ID=Msa1426220-mRNA-1:cds;Parent=Msa1426220-mRNA-1 |
| tig0025956 | CDS | 33501 | 33780 | 33501 | ID=Msa1426220-mRNA-1:cds;Parent=Msa1426220-mRNA-1 |
| tig0025956 | CDS | 33920 | 34054 | 33920 | ID=Msa1426220-mRNA-1:cds;Parent=Msa1426220-mRNA-1 |
| tig0025956 | CDS | 34147 | 34298 | 34147 | ID=Msa1426220-mRNA-1:cds;Parent=Msa1426220-mRNA-1 |
| tig0025956 | CDS | 34402 | 34640 | 34402 | ID=Msa1426220-mRNA-1:cds;Parent=Msa1426220-mRNA-1 |
| tig0025956 | CDS | 35212 | 35572 | 35212 | ID=Msa1426220-mRNA-1:cds;Parent=Msa1426220-mRNA-1 |
| tig0025956 | CDS | 35904 | 36314 | 35904 | ID=Msa1426220-mRNA-1:cds;Parent=Msa1426220-mRNA-1 |
| tig0025956 | CDS | 36399 | 36533 | 36399 | ID=Msa1426220-mRNA-1:cds;Parent=Msa1426220-mRNA-1 |
| tig0025956 | CDS | 36848 | 36917 | 36848 | ID=Msa1426220-mRNA-1:cds;Parent=Msa1426220-mRNA-1 |
| tig0025956 | CDS | 38904 | 38983 | 38904 | ID=Msa1426220-mRNA-1:cds;Parent=Msa1426220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
