Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1437840 | XP_003625469.2 | 98.965 | 1449 | 13 | 1 | 1 | 1447 | 1 | 1449 | 0.0 | 2942 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1437840 | sp|Q8RWY6|CLASP_ARATH | 73.167 | 1446 | 375 | 10 | 1 | 1443 | 1 | 1436 | 0.0 | 2081 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1437840 | G7KZK2 | 98.965 | 1449 | 13 | 1 | 1 | 1447 | 1 | 1449 | 0.0 | 2942 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0078530 | Msa1437840 | 0.803400 | 3.549711e-49 | -8.615850e-47 |
Msa1426220 | Msa1437840 | 0.802002 | 6.897468e-49 | -8.615850e-47 |
Msa0183640 | Msa1437840 | 0.811342 | 7.344516e-51 | -8.615850e-47 |
Msa0216580 | Msa1437840 | 0.814055 | 1.871912e-51 | -8.615850e-47 |
Msa1259680 | Msa1437840 | 0.811468 | 6.896275e-51 | -8.615850e-47 |
Msa1279490 | Msa1437840 | 0.802938 | 4.424205e-49 | -8.615850e-47 |
Msa1296250 | Msa1437840 | 0.838985 | 2.077052e-57 | -8.615850e-47 |
Msa0467110 | Msa1437840 | 0.803209 | 3.888982e-49 | -8.615850e-47 |
Msa1026100 | Msa1437840 | 0.820063 | 8.361409e-53 | -8.615850e-47 |
Msa1040110 | Msa1437840 | 0.836913 | 7.081325e-57 | -8.615850e-47 |
Msa1042400 | Msa1437840 | 0.995383 | 1.010453e-215 | -8.615850e-47 |
Msa1064860 | Msa1437840 | 0.823899 | 1.080340e-53 | -8.615850e-47 |
Msa1078230 | Msa1437840 | 0.881563 | 2.162987e-70 | -8.615850e-47 |
Msa1083420 | Msa1437840 | 0.829925 | 3.917322e-55 | -8.615850e-47 |
Msa1123170 | Msa1437840 | 0.944084 | 3.728279e-103 | -8.615850e-47 |
Msa1123290 | Msa1437840 | 0.982602 | 1.623240e-155 | -8.615850e-47 |
Msa1123310 | Msa1437840 | 0.986227 | 4.352050e-166 | -8.615850e-47 |
Msa1128170 | Msa1437840 | 0.846190 | 2.538140e-59 | -8.615850e-47 |
Msa1153620 | Msa1437840 | 0.830527 | 2.792970e-55 | -8.615850e-47 |
Msa1165370 | Msa1437840 | 0.823493 | 1.344390e-53 | -8.615850e-47 |
Msa1213820 | Msa1437840 | 0.838737 | 2.407881e-57 | -8.615850e-47 |
Msa1215020 | Msa1437840 | 0.803550 | 3.304656e-49 | -8.615850e-47 |
Msa0902040 | Msa1437840 | 0.821940 | 3.089772e-53 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1437840 | MtrunA17_Chr7g0262651 | 98.965 | 1449 | 13 | 1 | 1 | 1447 | 1 | 1449 | 0.0 | 2942 |
Msa1437840 | MtrunA17_Chr1g0182801 | 80.400 | 1449 | 272 | 6 | 1 | 1447 | 1 | 1439 | 0.0 | 2353 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1437840 | AT2G20190.1 | 73.167 | 1446 | 375 | 10 | 1 | 1443 | 1 | 1436 | 0.0 | 2081 |
Find 342 sgRNAs with CRISPR-Local
Find 1154 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACAAAATATTTGTTGGAATT+TGG | 0.076130 | tig0028364:+46049 | Msa1437840:three_prime_UTR |
CATCCTTTCCTTTGTGTCTT+TGG | 0.112893 | tig0028364:-28425 | Msa1437840:intergenic |
AATCCAATGGGTCAAAATTT+TGG | 0.135895 | tig0028364:+37767 | Msa1437840:CDS |
ACATTATTGATTGTATTTAA+TGG | 0.177524 | tig0028364:+46119 | Msa1437840:three_prime_UTR |
ATTCATTGCATGTTTGTTAA+AGG | 0.188353 | tig0028364:-37186 | Msa1437840:intergenic |
CTAAAGTTTCCTTCTCTATA+AGG | 0.193679 | tig0028364:-36567 | Msa1437840:intergenic |
GAGCAGCCTGTGCAACTTTA+TGG | 0.200058 | tig0028364:-36914 | Msa1437840:intergenic |
GAGAGAAAGTGAATTGAATT+TGG | 0.212670 | tig0028364:-28322 | Msa1437840:intergenic |
GACTGAATATGCAAGATCTT+TGG | 0.219724 | tig0028364:-37744 | Msa1437840:intergenic |
TAAAGAAAATTTGTGTGTTT+TGG | 0.236753 | tig0028364:+45874 | Msa1437840:three_prime_UTR |
CAGGTTCTGACTGGTCTTCC+AGG | 0.245900 | tig0028364:+36772 | Msa1437840:CDS |
TCTGACAATTGTGTGCTTAA+AGG | 0.255183 | tig0028364:-33737 | Msa1437840:intergenic |
GGCCTCCCTTGAAGAACTTT+TGG | 0.266142 | tig0028364:-31515 | Msa1437840:intergenic |
GGGTAGATTGACAGAGAAAA+AGG | 0.267586 | tig0028364:-28221 | Msa1437840:intergenic |
TAGAGTCAGTCTCAAGATTA+TGG | 0.283203 | tig0028364:-37697 | Msa1437840:intergenic |
CTTATAGAGAAGGAAACTTT+AGG | 0.288125 | tig0028364:+36568 | Msa1437840:CDS |
TGATGACTTGGCAGAATCTT+TGG | 0.288941 | tig0028364:-36385 | Msa1437840:intergenic |
GTGCATCTGGCCAATGTTCT+AGG | 0.295028 | tig0028364:-34573 | Msa1437840:intergenic |
CTGTTAAGGCCTTGCAAATA+TGG | 0.299400 | tig0028364:-45753 | Msa1437840:intergenic |
AGAATTGAAGGTCTTGTTCT+AGG | 0.299793 | tig0028364:+32464 | Msa1437840:CDS |
ACTAGTGGCCTCTGAAAATT+AGG | 0.300651 | tig0028364:-36612 | Msa1437840:intergenic |
TCAGCCGAACGATGTATTTC+TGG | 0.302985 | tig0028364:-34595 | Msa1437840:intergenic |
GTGACCCAAATCTTTCTGTT+AGG | 0.303689 | tig0028364:+30410 | Msa1437840:CDS |
CAACGAGTGAAGATAGTTAA+AGG | 0.306671 | tig0028364:-36802 | Msa1437840:intergenic |
GCTTCCCTAACAGAAAGATT+TGG | 0.308658 | tig0028364:-30415 | Msa1437840:intergenic |
GCTCTTTCAACAATTATTGT+AGG | 0.311129 | tig0028364:-30145 | Msa1437840:intergenic |
GCAGTCTGTTTACTTGAAAC+AGG | 0.314143 | tig0028364:-38709 | Msa1437840:intergenic |
CCATCTGAAGAGCGAACTTT+TGG | 0.316012 | tig0028364:-31421 | Msa1437840:intergenic |
TAAAGTTTCCTTCTCTATAA+GGG | 0.318163 | tig0028364:-36566 | Msa1437840:intergenic |
GTGCATACCCGTTGGATAAC+AGG | 0.323270 | tig0028364:-35615 | Msa1437840:intergenic |
TTCCCTGACTAACTCCTTAT+CGG | 0.326196 | tig0028364:-32375 | Msa1437840:intergenic |
ATCTCTCCGGTCATCAAGTT+TGG | 0.330267 | tig0028364:+36041 | Msa1437840:CDS |
GCTATTGAAAGCATGCTTAG+AGG | 0.330768 | tig0028364:+35988 | Msa1437840:CDS |
ATCAATTGCTTTGCCTGTCC+TGG | 0.331355 | tig0028364:-45823 | Msa1437840:intergenic |
TTATAGAGAAGGAAACTTTA+GGG | 0.331653 | tig0028364:+36569 | Msa1437840:CDS |
ACTGAATATGCAAGATCTTT+GGG | 0.337991 | tig0028364:-37743 | Msa1437840:intergenic |
CTACAATCTTCCTTCATCTA+TGG | 0.339295 | tig0028364:+31188 | Msa1437840:CDS |
ATCACGGCCAATTTAGCCTT+TGG | 0.340189 | tig0028364:-37146 | Msa1437840:intergenic |
GTGTTGTGAGTATGCTCTTT+TGG | 0.342851 | tig0028364:+34549 | Msa1437840:CDS |
TTATCGGAGTATATCTTGAT+AGG | 0.343302 | tig0028364:-32359 | Msa1437840:intergenic |
AAGGTCCGCCAAGTTGCTTC+AGG | 0.344427 | tig0028364:-33718 | Msa1437840:intergenic |
GTTCCAACGCTTCCTCCATT+TGG | 0.346006 | tig0028364:-28393 | Msa1437840:intergenic |
GCTTCAACTGTGTGCTGTTA+AGG | 0.349975 | tig0028364:-45767 | Msa1437840:intergenic |
ATTCCAAGTGGTTATATTAC+CGG | 0.355163 | tig0028364:+31445 | Msa1437840:CDS |
ACAACAGAGCCTACTGCTTA+TGG | 0.356181 | tig0028364:+36294 | Msa1437840:CDS |
TCGTCTAATCCACCTGGTTA+TGG | 0.356888 | tig0028364:+35811 | Msa1437840:CDS |
CCTCTTTAGGATCAATTAAC+CGG | 0.360255 | tig0028364:-37019 | Msa1437840:intergenic |
GCAGAAGGTGCTGCTAATAT+TGG | 0.363729 | tig0028364:+37209 | Msa1437840:CDS |
ACAAACATTGACAGGCAAAA+AGG | 0.363837 | tig0028364:-46012 | Msa1437840:intergenic |
CGATGTATTTCTGGTGCATC+TGG | 0.364125 | tig0028364:-34586 | Msa1437840:intergenic |
GATATTAATGCCAGGCTAGA+AGG | 0.365688 | tig0028364:+31391 | Msa1437840:CDS |
GCTTGCTAAGTTAACCCCTT+TGG | 0.366050 | tig0028364:+37247 | Msa1437840:CDS |
CAGGGTCAAAGGATGAAAAT+AGG | 0.367173 | tig0028364:-35596 | Msa1437840:intergenic |
TCATTACCTTGGAAGATATT+CGG | 0.368322 | tig0028364:+37556 | Msa1437840:CDS |
CAACACTGATAAGCAGTATC+TGG | 0.371758 | tig0028364:+36539 | Msa1437840:CDS |
AAGGTCTCCAAAGGCTAAAT+TGG | 0.372750 | tig0028364:+37139 | Msa1437840:CDS |
TCCTGCCACCATCACTATCT+AGG | 0.373670 | tig0028364:-37586 | Msa1437840:intergenic |
GACGGTTGTGCTTGAGGTGC+TGG | 0.374712 | tig0028364:+41420 | Msa1437840:CDS |
CAGCTTGGGCGCACAAAAGC+TGG | 0.376157 | tig0028364:+30176 | Msa1437840:CDS |
CAACAAATGACCAGTCTGTT+TGG | 0.378186 | tig0028364:+38758 | Msa1437840:CDS |
ACTGCTTATGGTGTCTATAA+AGG | 0.379001 | tig0028364:+36306 | Msa1437840:CDS |
CATCCTCATATTCAACTAGA+AGG | 0.381322 | tig0028364:+36439 | Msa1437840:CDS |
TTGATCCTAAAGAGGTTGTT+AGG | 0.381649 | tig0028364:+37027 | Msa1437840:CDS |
GTTCAGTTATTTGAATACTT+TGG | 0.381775 | tig0028364:+46162 | Msa1437840:three_prime_UTR |
CTTCCCTAACAGAAAGATTT+GGG | 0.383653 | tig0028364:-30414 | Msa1437840:intergenic |
TAAGGGTACAGAACGTAGTT+TGG | 0.383982 | tig0028364:+35930 | Msa1437840:CDS |
TATGATCCATCTGATGTTGT+AGG | 0.388722 | tig0028364:+37491 | Msa1437840:CDS |
ACTCCTCGTTTAGATGTTAA+CGG | 0.390252 | tig0028364:+37848 | Msa1437840:CDS |
CAAAGAACTTCCTTCTGCAT+TGG | 0.391885 | tig0028364:+37919 | Msa1437840:CDS |
CATTCCTCAAATTCTTCATA+TGG | 0.395024 | tig0028364:+38003 | Msa1437840:CDS |
TCAGGTTATTGTCCCTCTAC+TGG | 0.398103 | tig0028364:+42018 | Msa1437840:intron |
TGACCCAAATCTTTCTGTTA+GGG | 0.402443 | tig0028364:+30411 | Msa1437840:CDS |
AATATGTCTGATAAGCATAA+TGG | 0.403866 | tig0028364:+36015 | Msa1437840:CDS |
ACAAGCCCAGACCACCATTT+CGG | 0.406322 | tig0028364:-36335 | Msa1437840:intergenic |
TTCTTGCATCGATCTCTTGA+AGG | 0.406487 | tig0028364:+28528 | Msa1437840:CDS |
CCTTTCTTCAGCTTGTGGGC+AGG | 0.410427 | tig0028364:+43367 | Msa1437840:intron |
CCAATTCTAAAATTCTTTCA+CGG | 0.413505 | tig0028364:-45934 | Msa1437840:intergenic |
ACTCCGATAAGGAGTTAGTC+AGG | 0.418407 | tig0028364:+32372 | Msa1437840:CDS |
GGCTGCCTAACAACCTCTTT+AGG | 0.419642 | tig0028364:-37032 | Msa1437840:intergenic |
CTTTCCATGTATCCCTCAAA+AGG | 0.420597 | tig0028364:-36975 | Msa1437840:intergenic |
AGACGAAGCAGAGGCTTGAC+TGG | 0.422678 | tig0028364:-35794 | Msa1437840:intergenic |
GATGATAACCAGCTATCTCT+TGG | 0.425734 | tig0028364:+36684 | Msa1437840:CDS |
CGGTCATCAAGTTTGGATCT+AGG | 0.426025 | tig0028364:+36048 | Msa1437840:CDS |
CAGTGGTGTTGTTGAGGGTG+TGG | 0.426638 | tig0028364:-28151 | Msa1437840:intergenic |
GCTTGTGGGCAGGCTCTCTC+AGG | 0.427650 | tig0028364:+43377 | Msa1437840:intron |
GTGGATATTTATATCATGCT+TGG | 0.427668 | tig0028364:+45717 | Msa1437840:CDS |
TTTGCCTGTCAATGTTTGTT+GGG | 0.427807 | tig0028364:+46016 | Msa1437840:three_prime_UTR |
TAGTAACCGAAATGGTGGTC+TGG | 0.427859 | tig0028364:+36329 | Msa1437840:CDS |
GCTGCTATGCAGAGAATTGA+AGG | 0.429151 | tig0028364:+32452 | Msa1437840:CDS |
TACCGAACTTCCACTTCAAC+GGG | 0.429289 | tig0028364:+30255 | Msa1437840:CDS |
TTCTAGAAGCTTCTAGAAGA+TGG | 0.434202 | tig0028364:-28468 | Msa1437840:intergenic |
CGTGGACTCCTGAAGCAACT+TGG | 0.434510 | tig0028364:+33710 | Msa1437840:CDS |
TGGTTGAATCCCTTCTAGCC+TGG | 0.434978 | tig0028364:-31401 | Msa1437840:intergenic |
TTATCCTTTCTTCAGCTTGT+GGG | 0.437137 | tig0028364:+43363 | Msa1437840:intron |
TGGATATTTATATCATGCTT+GGG | 0.438120 | tig0028364:+45718 | Msa1437840:CDS |
CTGATGACAATAGTGACATC+AGG | 0.441651 | tig0028364:+36493 | Msa1437840:CDS |
GCAGAGGCAGCAGCTGGAAA+AGG | 0.442895 | tig0028364:-36246 | Msa1437840:intergenic |
TTTAGCACAATCAGCTATAC+GGG | 0.443629 | tig0028364:-34427 | Msa1437840:intergenic |
CTCACCATATGAAGAATTTG+AGG | 0.444041 | tig0028364:-38007 | Msa1437840:intergenic |
ATGAAGAATTTGAGGAATGC+TGG | 0.446130 | tig0028364:-37999 | Msa1437840:intergenic |
ACAGGCAAAGTCACTTGGTA+AGG | 0.446469 | tig0028364:+35912 | Msa1437840:CDS |
GGCTCTCAATCTAGCCAACT+TGG | 0.448527 | tig0028364:+37788 | Msa1437840:CDS |
AGAGAAAGAGAGAGTGAGAG+AGG | 0.454704 | tig0028364:-28242 | Msa1437840:intergenic |
CTTTGACCCTGTTATCCAAC+GGG | 0.454812 | tig0028364:+35608 | Msa1437840:CDS |
CTAGTGAGAAAGAATGCAAC+TGG | 0.460172 | tig0028364:+36630 | Msa1437840:CDS |
TGATACCGTTCATGATTAGC+AGG | 0.460952 | tig0028364:+45842 | Msa1437840:exon |
TCAGATCTAATAATCACTTC+GGG | 0.461342 | tig0028364:-28363 | Msa1437840:intergenic |
TCACCTTCCATTCGTGATAG+AGG | 0.462746 | tig0028364:+35754 | Msa1437840:CDS |
TGCACCAGAAATACATCGTT+CGG | 0.463715 | tig0028364:+34591 | Msa1437840:CDS |
ACATTTCTCCAAGAGATAGC+TGG | 0.465381 | tig0028364:-36692 | Msa1437840:intergenic |
TTGAAGAGCTTGTCAAATGA+TGG | 0.468237 | tig0028364:-36272 | Msa1437840:intergenic |
TTGATATATACCATAGATGA+AGG | 0.468278 | tig0028364:-31198 | Msa1437840:intergenic |
ATCAATTCCATGGCAGACAC+TGG | 0.469342 | tig0028364:+37974 | Msa1437840:CDS |
CAGCCATGTTCAACAACATT+GGG | 0.472492 | tig0028364:+37050 | Msa1437840:CDS |
AAGGTGAAGAAGTAAAGAAC+TGG | 0.472962 | tig0028364:-45960 | Msa1437840:intergenic |
TCATTAGAGCGTTTAAATGT+TGG | 0.474930 | tig0028364:+37878 | Msa1437840:CDS |
CTCTGGTGTACTTCTTTCAC+AGG | 0.477132 | tig0028364:+35894 | Msa1437840:CDS |
GAGCTCTCTGACAGAGGAAT+CGG | 0.478338 | tig0028364:-41449 | Msa1437840:intergenic |
CAATCTCAACTGAATTCTCC+AGG | 0.479021 | tig0028364:-41684 | Msa1437840:intergenic |
TCAAAAGGCTTTCGACATGC+TGG | 0.479225 | tig0028364:-36960 | Msa1437840:intergenic |
AGAAGTTCAAGTTTATCGTC+GGG | 0.480812 | tig0028364:+35859 | Msa1437840:CDS |
AAGCTTTGAGTGAAGGACTT+AGG | 0.480961 | tig0028364:+36748 | Msa1437840:CDS |
TTGAGTGAAGGACTTAGGTC+AGG | 0.481033 | tig0028364:+36753 | Msa1437840:CDS |
CTTTCACAGGCAAAGTCACT+TGG | 0.481503 | tig0028364:+35907 | Msa1437840:CDS |
TTGCACGAAGCACTGCATTC+CGG | 0.482107 | tig0028364:-34455 | Msa1437840:intergenic |
ATAGTGATGGTGGCAGGAAG+TGG | 0.482456 | tig0028364:+37591 | Msa1437840:CDS |
CCGGTTAATTGATCCTAAAG+AGG | 0.482879 | tig0028364:+37019 | Msa1437840:CDS |
GTTGCATTCTTTCTCACTAG+TGG | 0.484489 | tig0028364:-36627 | Msa1437840:intergenic |
TGTTCTGTAGATAGTTTACT+AGG | 0.486114 | tig0028364:-37439 | Msa1437840:intergenic |
TATAAAGGTAGTAACCGAAA+TGG | 0.486704 | tig0028364:+36321 | Msa1437840:CDS |
ACAACTTCTAGAGTTCCCTT+TGG | 0.486937 | tig0028364:-36837 | Msa1437840:intergenic |
TTATTGAGTGATTAATTTAG+CGG | 0.487659 | tig0028364:-28279 | Msa1437840:intergenic |
TTGTTAACAGAAAGATGCCC+TGG | 0.489238 | tig0028364:+41666 | Msa1437840:intron |
TTCCAAGTGGTTATATTACC+GGG | 0.489260 | tig0028364:+31446 | Msa1437840:CDS |
ACAATAATTGTTGAAAGAGC+AGG | 0.489351 | tig0028364:+30148 | Msa1437840:CDS |
AAAAGGATATGATGAATGAA+TGG | 0.489632 | tig0028364:-28204 | Msa1437840:intergenic |
AGGTTCTGACTGGTCTTCCA+GGG | 0.490533 | tig0028364:+36773 | Msa1437840:CDS |
GATACTGCTTATCAGTGTTG+TGG | 0.490699 | tig0028364:-36536 | Msa1437840:intergenic |
TCGGGGACATCTGTCTCCTC+TGG | 0.490803 | tig0028364:+35877 | Msa1437840:CDS |
TACAACATCAGATGGATCAT+AGG | 0.493812 | tig0028364:-37489 | Msa1437840:intergenic |
AAGATCTAGCATCGTAAAGC+AGG | 0.494097 | tig0028364:+33763 | Msa1437840:CDS |
ATTGCAGTTAATAAATGAAG+AGG | 0.495585 | tig0028364:+35705 | Msa1437840:intron |
GGAAGGATAGCCCGTTGAAG+TGG | 0.495687 | tig0028364:-30265 | Msa1437840:intergenic |
TCTAGGAAAGCTCATTACCT+TGG | 0.498571 | tig0028364:+37545 | Msa1437840:CDS |
AGCCCTTCTAGTTGAATATG+AGG | 0.500351 | tig0028364:-36442 | Msa1437840:intergenic |
TATATCTTGATAGGGTCTAC+AGG | 0.500636 | tig0028364:-32350 | Msa1437840:intergenic |
AGTAACCGAAATGGTGGTCT+GGG | 0.501600 | tig0028364:+36330 | Msa1437840:CDS |
CTTCTGAAAGATTACAAGAA+AGG | 0.502501 | tig0028364:+36463 | Msa1437840:CDS |
CAAAGGCCAAAAGTTCTTCA+AGG | 0.502503 | tig0028364:+31509 | Msa1437840:CDS |
AGCATAATGGATCATCTCTC+CGG | 0.503614 | tig0028364:+36028 | Msa1437840:CDS |
CGTACACTCAAACATCTGAA+TGG | 0.504559 | tig0028364:-41886 | Msa1437840:intergenic |
GCAGCCATGTTCAACAACAT+TGG | 0.504747 | tig0028364:+37049 | Msa1437840:CDS |
TTCATCACGAAATTGAGGTC+CGG | 0.506159 | tig0028364:-31157 | Msa1437840:intergenic |
AAAGAGCAGGATCCTCAGCT+TGG | 0.507528 | tig0028364:+30161 | Msa1437840:CDS |
TGGGATGCAGAGGCAGCAGC+TGG | 0.511453 | tig0028364:-36252 | Msa1437840:intergenic |
TATCAAGATATACTCCGATA+AGG | 0.513582 | tig0028364:+32361 | Msa1437840:CDS |
AAAGCTTCATGAAGAGATGC+TGG | 0.514105 | tig0028364:-36732 | Msa1437840:intergenic |
AAGAGTGAGCTCTCTGACAG+AGG | 0.514120 | tig0028364:-41455 | Msa1437840:intergenic |
ATAGTTAAAGGCAGCAACCC+TGG | 0.514896 | tig0028364:-36790 | Msa1437840:intergenic |
AGCCCGTTGAAGTGGAAGTT+CGG | 0.515007 | tig0028364:-30257 | Msa1437840:intergenic |
TCACATTCAACAGAAGCTGC+TGG | 0.517511 | tig0028364:-37653 | Msa1437840:intergenic |
CTTCATGAAGCTTTGAGTGA+AGG | 0.517552 | tig0028364:+36741 | Msa1437840:CDS |
CCCTAGATAGTGATGGTGGC+AGG | 0.519354 | tig0028364:+37585 | Msa1437840:CDS |
AACAATTTCCGTGTCTCTCA+AGG | 0.520980 | tig0028364:+28553 | Msa1437840:CDS |
ATTAACAGTGGTGTTGTTGA+GGG | 0.521392 | tig0028364:-28156 | Msa1437840:intergenic |
GAGAAAGAGAGAGTGAGAGA+GGG | 0.521586 | tig0028364:-28241 | Msa1437840:intergenic |
TAATCACAACCAGCTTGAAA+AGG | 0.521733 | tig0028364:-34241 | Msa1437840:intergenic |
TTCAGATCTAATAATCACTT+CGG | 0.522150 | tig0028364:-28364 | Msa1437840:intergenic |
TATTCTTGTCATGAACCAAA+GGG | 0.522990 | tig0028364:-37262 | Msa1437840:intergenic |
ATATTGGCATATTAAAATTG+TGG | 0.523136 | tig0028364:+37225 | Msa1437840:CDS |
TACAAAAGATATCGTTCCTA+AGG | 0.524211 | tig0028364:+41729 | Msa1437840:CDS |
TGGCAGGAAGTGGAGCTCTC+AGG | 0.524419 | tig0028364:+37601 | Msa1437840:CDS |
AACACCCAACAAACATTGAC+AGG | 0.525730 | tig0028364:-46020 | Msa1437840:intergenic |
GGTGAGGATCATCCAAGTGC+TGG | 0.525863 | tig0028364:-36893 | Msa1437840:intergenic |
ATTTGAAGTCTTAATTTCCC+CGG | 0.526322 | tig0028364:-31464 | Msa1437840:intergenic |
CTACCGAACTTCCACTTCAA+CGG | 0.529551 | tig0028364:+30254 | Msa1437840:CDS |
CGAATCTCACAAGCCAGGAC+AGG | 0.529576 | tig0028364:+45810 | Msa1437840:CDS |
TGCATACCCGTTGGATAACA+GGG | 0.529598 | tig0028364:-35614 | Msa1437840:intergenic |
ACTGAGATAAAACAATGGTC+AGG | 0.529615 | tig0028364:-41858 | Msa1437840:intergenic |
GACACAAAGGAAAGGATGGC+TGG | 0.532491 | tig0028364:+28430 | Msa1437840:CDS |
GTATGTCTGCTGGCAGGAGG+AGG | 0.532554 | tig0028364:+36655 | Msa1437840:CDS |
CCCGCCGTCGTTGATCGTCT+CGG | 0.534618 | tig0028364:+28649 | Msa1437840:CDS |
AAGAGCAGGATCCTCAGCTT+GGG | 0.535482 | tig0028364:+30162 | Msa1437840:CDS |
GCTCTCTCAGGAGGAACTGA+TGG | 0.536933 | tig0028364:+43389 | Msa1437840:CDS |
GATCCAAATGGAGGAAGCGT+TGG | 0.537162 | tig0028364:+28390 | Msa1437840:exon |
ATGGGTATGTTGGTTTCTCT+AGG | 0.537942 | tig0028364:+37528 | Msa1437840:CDS |
GTAGGAACGTCATCTGAAGA+TGG | 0.538448 | tig0028364:+37509 | Msa1437840:CDS |
GTTGAATATGAGGATGGTAA+AGG | 0.539003 | tig0028364:-36432 | Msa1437840:intergenic |
ATATTAATGCCAGGCTAGAA+GGG | 0.539984 | tig0028364:+31392 | Msa1437840:CDS |
TCATCTGAAGATGGGTATGT+TGG | 0.541060 | tig0028364:+37518 | Msa1437840:CDS |
AATAGGCGACGAGAACGCTC+TGG | 0.543230 | tig0028364:-35579 | Msa1437840:intergenic |
GCATATTCAGTCAATCCAAT+GGG | 0.544477 | tig0028364:+37755 | Msa1437840:CDS |
AGATGGATCATAGGAAGACT+TGG | 0.544530 | tig0028364:-37480 | Msa1437840:intergenic |
GAGCGTTTAAATGTTGGTGA+AGG | 0.545122 | tig0028364:+37884 | Msa1437840:CDS |
TAGAAGTTCAAGTTTATCGT+CGG | 0.547585 | tig0028364:+35858 | Msa1437840:CDS |
TCCTCACCATAAAGTTGCAC+AGG | 0.548676 | tig0028364:+36908 | Msa1437840:CDS |
TACCTTGGAAGATATTCGGC+TGG | 0.549978 | tig0028364:+37560 | Msa1437840:CDS |
AACATCTGCAATTGTTGCAA+TGG | 0.551677 | tig0028364:+35834 | Msa1437840:CDS |
GAGGCAGCAGCTGGAAAAGG+CGG | 0.552050 | tig0028364:-36243 | Msa1437840:intergenic |
CTCTTTAGGATCAATTAACC+GGG | 0.552996 | tig0028364:-37018 | Msa1437840:intergenic |
TGCATATTCAGTCAATCCAA+TGG | 0.554459 | tig0028364:+37754 | Msa1437840:CDS |
AAAGGAAAGGATGGCTGGTG+TGG | 0.554714 | tig0028364:+28435 | Msa1437840:CDS |
GTATTCTTGTCATGAACCAA+AGG | 0.555569 | tig0028364:-37263 | Msa1437840:intergenic |
CCGAGACGATCAACGACGGC+GGG | 0.555573 | tig0028364:-28649 | Msa1437840:intergenic |
GGACTCCTGAAGCAACTTGG+CGG | 0.556285 | tig0028364:+33713 | Msa1437840:CDS |
GACTTAGGTCAGGTTCTGAC+TGG | 0.556302 | tig0028364:+36763 | Msa1437840:CDS |
ATCTAGCCAACTTGGACAAG+TGG | 0.556364 | tig0028364:+37796 | Msa1437840:CDS |
TACTGTCCACTTGTCCAAGT+TGG | 0.558331 | tig0028364:-37802 | Msa1437840:intergenic |
TGAAGAATTTGAGGAATGCT+GGG | 0.558842 | tig0028364:-37998 | Msa1437840:intergenic |
CCAAAAGTTCGCTCTTCAGA+TGG | 0.561614 | tig0028364:+31421 | Msa1437840:CDS |
GACGTTCCTACAACATCAGA+TGG | 0.561676 | tig0028364:-37497 | Msa1437840:intergenic |
AGATCTGAAGCAGATCCAAA+TGG | 0.562147 | tig0028364:+28378 | Msa1437840:exon |
GCAACTGGACGTATGTCTGC+TGG | 0.563541 | tig0028364:+36645 | Msa1437840:CDS |
GCTTCCGCCGCTGTTCTCTC+CGG | 0.564186 | tig0028364:+28592 | Msa1437840:CDS |
AATTAACAGTGGTGTTGTTG+AGG | 0.564838 | tig0028364:-28157 | Msa1437840:intergenic |
CCTGCCACCATCACTATCTA+GGG | 0.564900 | tig0028364:-37585 | Msa1437840:intergenic |
GACTCTAATTGTGACAGTCC+TGG | 0.565623 | tig0028364:+37713 | Msa1437840:CDS |
CTAGGTCTACTTCAATGCGA+GGG | 0.565837 | tig0028364:-37421 | Msa1437840:intergenic |
AAAGTTTCCTTCTCTATAAG+GGG | 0.566261 | tig0028364:-36565 | Msa1437840:intergenic |
CTAGATCCAAACTTGATGAC+CGG | 0.568552 | tig0028364:-36047 | Msa1437840:intergenic |
ATCCTCATATTCAACTAGAA+GGG | 0.569120 | tig0028364:+36440 | Msa1437840:CDS |
TGAAGTTCATCACGAAATTG+AGG | 0.570234 | tig0028364:-31162 | Msa1437840:intergenic |
CAAAGACACAAAGGAAAGGA+TGG | 0.570578 | tig0028364:+28426 | Msa1437840:CDS |
CCTTTGACCCTGTTATCCAA+CGG | 0.572190 | tig0028364:+35607 | Msa1437840:CDS |
TAACAGCACACAGTTGAAGC+TGG | 0.572317 | tig0028364:+45770 | Msa1437840:CDS |
ACGACTACTTCTAACGCTGA+TGG | 0.572730 | tig0028364:+28705 | Msa1437840:CDS |
GCATTCTTGCCATATTTGCA+AGG | 0.573346 | tig0028364:+45744 | Msa1437840:CDS |
AGGTGAAAGATATTAATGCC+AGG | 0.573894 | tig0028364:+31383 | Msa1437840:intron |
CTGGATGCCCCTTATAGAGA+AGG | 0.574876 | tig0028364:+36558 | Msa1437840:CDS |
GGACAGTAGCATGAATTTCG+AGG | 0.575082 | tig0028364:+37817 | Msa1437840:CDS |
TTGAATTTGAGTGATTATGT+CGG | 0.577543 | tig0028364:-36358 | Msa1437840:intergenic |
TCGTTCGGCTGAGTTATATG+AGG | 0.577643 | tig0028364:+34606 | Msa1437840:CDS |
CCGTTGGATAACAGGGTCAA+AGG | 0.579058 | tig0028364:-35607 | Msa1437840:intergenic |
CTTCACTCGTTGTTGCAGCA+AGG | 0.580162 | tig0028364:+36813 | Msa1437840:CDS |
TTGCATTAATTGCTTAACAA+AGG | 0.580296 | tig0028364:+42069 | Msa1437840:CDS |
TCAATTCCATGGCAGACACT+GGG | 0.580366 | tig0028364:+37975 | Msa1437840:CDS |
CCTTGCGAACATCTGCACTC+TGG | 0.581091 | tig0028364:-43458 | Msa1437840:intergenic |
TAGGAACGTCATCTGAAGAT+GGG | 0.581520 | tig0028364:+37510 | Msa1437840:CDS |
TCTTTACAGCTTCAGTTGAG+TGG | 0.582306 | tig0028364:-37952 | Msa1437840:intergenic |
GAAATGTCAAGTTATTCAGA+TGG | 0.582491 | tig0028364:+36708 | Msa1437840:CDS |
TTGTTGCAGCAAGGTCCAAA+GGG | 0.582853 | tig0028364:+36822 | Msa1437840:CDS |
GTTGTTGCAGCAAGGTCCAA+AGG | 0.583709 | tig0028364:+36821 | Msa1437840:CDS |
CGAATCGAATCTCACAAGCC+AGG | 0.584680 | tig0028364:+45805 | Msa1437840:CDS |
CTTCTAGTTGAATATGAGGA+TGG | 0.585471 | tig0028364:-36438 | Msa1437840:intergenic |
ATTGATTGCAAATTCAATCA+CGG | 0.585930 | tig0028364:-37162 | Msa1437840:intergenic |
GACGAAGCAGAGGCTTGACT+GGG | 0.587080 | tig0028364:-35793 | Msa1437840:intergenic |
CAGTTAATAAATGAAGAGGA+TGG | 0.587122 | tig0028364:+35709 | Msa1437840:intron |
AGCAGCTTCTGTTGAATGTG+AGG | 0.587390 | tig0028364:+37655 | Msa1437840:CDS |
TCTAGTGAACGTAACAGTGC+AGG | 0.587952 | tig0028364:-37110 | Msa1437840:intergenic |
CTCCGATAAGGAGTTAGTCA+GGG | 0.590691 | tig0028364:+32373 | Msa1437840:CDS |
TTTCATTCTGAGTTTGTCAG+TGG | 0.592718 | tig0028364:+37358 | Msa1437840:CDS |
TCATCATCGGTAACCAGTAG+AGG | 0.592993 | tig0028364:-42031 | Msa1437840:intergenic |
ATAGTGACATCAGGGAGGCT+AGG | 0.593421 | tig0028364:+36502 | Msa1437840:CDS |
CAGTCTGTTTACTTGAAACA+GGG | 0.594121 | tig0028364:-38708 | Msa1437840:intergenic |
CGCCAAGAAAAGTAGTCCAA+AGG | 0.594287 | tig0028364:+31492 | Msa1437840:CDS |
CAGGAAATGTATACACAAGC+CGG | 0.594948 | tig0028364:+31138 | Msa1437840:intron |
TGTGGGCAGGCTCTCTCAGG+AGG | 0.596265 | tig0028364:+43380 | Msa1437840:CDS |
GCCTGTGCAACTTTATGGTG+AGG | 0.596403 | tig0028364:-36909 | Msa1437840:intergenic |
AGCTGTAAAGATCAATTCCA+TGG | 0.596649 | tig0028364:+37964 | Msa1437840:CDS |
TTCAGGAGTCCACGAAAACA+TGG | 0.598968 | tig0028364:-33701 | Msa1437840:intergenic |
TTAATAAATGAAGAGGATGG+AGG | 0.599331 | tig0028364:+35712 | Msa1437840:CDS |
CTGGACGTATGTCTGCTGGC+AGG | 0.600126 | tig0028364:+36649 | Msa1437840:CDS |
TATCGGAGTATATCTTGATA+GGG | 0.601105 | tig0028364:-32358 | Msa1437840:intergenic |
CAGTGCACCTCTATCACGAA+TGG | 0.601724 | tig0028364:-35761 | Msa1437840:intergenic |
GACAGTAGCATGAATTTCGA+GGG | 0.605478 | tig0028364:+37818 | Msa1437840:CDS |
GGAATGCAGTGCTTCGTGCA+AGG | 0.606285 | tig0028364:+34457 | Msa1437840:CDS |
TCCCCGGTAATATAACCACT+TGG | 0.607725 | tig0028364:-31448 | Msa1437840:intergenic |
AGCAGCAGAAGGTGATGTCA+CGG | 0.608738 | tig0028364:+32322 | Msa1437840:intron |
ATACCTTGGTCCAAACAGAC+TGG | 0.609551 | tig0028364:-38768 | Msa1437840:intergenic |
AAAGGCCAAAAGTTCTTCAA+GGG | 0.611156 | tig0028364:+31510 | Msa1437840:CDS |
CAGGCAAAGTCACTTGGTAA+GGG | 0.612604 | tig0028364:+35913 | Msa1437840:CDS |
ACTACTTCTAACGCTGATGG+AGG | 0.612965 | tig0028364:+28708 | Msa1437840:CDS |
ATTGAAGGTCTTGTTCTAGG+AGG | 0.613383 | tig0028364:+32467 | Msa1437840:CDS |
GGCGGATCACGAGACGATGG+AGG | 0.614369 | tig0028364:-36225 | Msa1437840:intergenic |
AGATGAACAAAGGTCTCCAA+AGG | 0.615332 | tig0028364:+37130 | Msa1437840:CDS |
GGCCAAAAGTTCTTCAAGGG+AGG | 0.616438 | tig0028364:+31513 | Msa1437840:CDS |
GTGAATTGAATTTGGAAGCG+CGG | 0.616926 | tig0028364:-28314 | Msa1437840:intergenic |
AAAGGTAGTAACCGAAATGG+TGG | 0.617234 | tig0028364:+36324 | Msa1437840:CDS |
TGAAGAGCTTGTCAAATGAT+GGG | 0.618411 | tig0028364:-36271 | Msa1437840:intergenic |
AAACATGCAATGAATGCAGA+AGG | 0.618604 | tig0028364:+37194 | Msa1437840:CDS |
GCTGGTTCCCTAGATAGTGA+TGG | 0.619613 | tig0028364:+37578 | Msa1437840:CDS |
ACTCCCAATGTTGTTGAACA+TGG | 0.621019 | tig0028364:-37053 | Msa1437840:intergenic |
AACCAGCCGAATATCTTCCA+AGG | 0.622634 | tig0028364:-37562 | Msa1437840:intergenic |
GGTTCCCTAGATAGTGATGG+TGG | 0.622894 | tig0028364:+37581 | Msa1437840:CDS |
ATTACTATGATATGATGACT+TGG | 0.624242 | tig0028364:-36397 | Msa1437840:intergenic |
TGATTAAGTTCCAATGCAGA+AGG | 0.625253 | tig0028364:-37929 | Msa1437840:intergenic |
CCAGAGTGCAGATGTTCGCA+AGG | 0.626592 | tig0028364:+43458 | Msa1437840:CDS |
CGTTAGAAGTAGTCGTCGCG+CGG | 0.626871 | tig0028364:-28698 | Msa1437840:intergenic |
GTGAAGTTTGAAATGCTCGC+CGG | 0.628311 | tig0028364:-28611 | Msa1437840:intergenic |
GCGGATCACGAGACGATGGA+GGG | 0.629075 | tig0028364:-36224 | Msa1437840:intergenic |
GACGTATGTCTGCTGGCAGG+AGG | 0.630416 | tig0028364:+36652 | Msa1437840:CDS |
GAAGTTCAAGTTTATCGTCG+GGG | 0.631675 | tig0028364:+35860 | Msa1437840:CDS |
TGATGACAATAGTGACATCA+GGG | 0.632100 | tig0028364:+36494 | Msa1437840:CDS |
ATTGCAGATGTTCCATAACC+AGG | 0.632401 | tig0028364:-35823 | Msa1437840:intergenic |
TTATAGACACCATAAGCAGT+AGG | 0.632452 | tig0028364:-36303 | Msa1437840:intergenic |
GTAAAGTCAATACAGGAGGA+AGG | 0.632736 | tig0028364:-30282 | Msa1437840:intergenic |
TGACCAGTCTGTTTGGACCA+AGG | 0.634255 | tig0028364:+38765 | Msa1437840:CDS |
ACCGAGACGATCAACGACGG+CGG | 0.634570 | tig0028364:-28650 | Msa1437840:intergenic |
TCTGCTTCGTCTAATCCACC+TGG | 0.635431 | tig0028364:+35805 | Msa1437840:CDS |
GCACCTCTATCACGAATGGA+AGG | 0.636243 | tig0028364:-35757 | Msa1437840:intergenic |
ATGAACCTGCTAATCATGAA+CGG | 0.636498 | tig0028364:-45847 | Msa1437840:intergenic |
AAGAGGATGGAGGAATACAC+AGG | 0.637453 | tig0028364:+35722 | Msa1437840:CDS |
AAACTATATATATAGAACAA+AGG | 0.638742 | tig0028364:-45979 | Msa1437840:intergenic |
ATCTACAGAACAAGAAAGAG+CGG | 0.639058 | tig0028364:+37450 | Msa1437840:CDS |
CATCATCGGTAACCAGTAGA+GGG | 0.639786 | tig0028364:-42030 | Msa1437840:intergenic |
CGTTTCAGATGCAATGAGCG+AGG | 0.639838 | tig0028364:+34645 | Msa1437840:CDS |
ACTAGGTCTACTTCAATGCG+AGG | 0.641616 | tig0028364:-37422 | Msa1437840:intergenic |
AAAGGCGGATCACGAGACGA+TGG | 0.642101 | tig0028364:-36228 | Msa1437840:intergenic |
CTCGCCGGAGAGAACAGCGG+CGG | 0.643053 | tig0028364:-28596 | Msa1437840:intergenic |
GCGCCAAAGACACAAAGGAA+AGG | 0.643671 | tig0028364:+28422 | Msa1437840:CDS |
CACACGCGCCAAAGACACAA+AGG | 0.645040 | tig0028364:+28417 | Msa1437840:CDS |
GTTGCATGCAAGCAAACAGA+AGG | 0.645304 | tig0028364:+35960 | Msa1437840:CDS |
AAAAGAGAAGGTAGAAACGA+GGG | 0.646628 | tig0028364:-43420 | Msa1437840:intergenic |
TGTCAAATGATGGGATGCAG+AGG | 0.648596 | tig0028364:-36262 | Msa1437840:intergenic |
AATCTCAACTGAATTCTCCA+GGG | 0.650859 | tig0028364:-41683 | Msa1437840:intergenic |
TCTTCAGATGGTATTCCAAG+TGG | 0.653318 | tig0028364:+31433 | Msa1437840:CDS |
CAAAAGCTGGAGAGTCAGAG+AGG | 0.656741 | tig0028364:+30189 | Msa1437840:CDS |
TATAGGTACGATCTACTGCA+AGG | 0.659106 | tig0028364:+35526 | Msa1437840:intron |
TCCAAGTGGTTATATTACCG+GGG | 0.660621 | tig0028364:+31447 | Msa1437840:CDS |
TTCAAATAACTGAACCAATG+CGG | 0.662288 | tig0028364:-46154 | Msa1437840:intergenic |
TCTGAAGCAGATCCAAATGG+AGG | 0.664521 | tig0028364:+28381 | Msa1437840:exon |
TAGATATGCAATGCTGATGA+CGG | 0.669434 | tig0028364:+38682 | Msa1437840:intron |
CTGCATAGCAGCAATACGAA+CGG | 0.669736 | tig0028364:-32441 | Msa1437840:intergenic |
TACGTTCACTAGATGAACAA+AGG | 0.670717 | tig0028364:+37120 | Msa1437840:CDS |
TAGGTCTACTTCAATGCGAG+GGG | 0.678410 | tig0028364:-37420 | Msa1437840:intergenic |
ATGCTCGCCGGAGAGAACAG+CGG | 0.678667 | tig0028364:-28599 | Msa1437840:intergenic |
AGGTGGATTAGACGAAGCAG+AGG | 0.679058 | tig0028364:-35803 | Msa1437840:intergenic |
ATTCTTGTCATGAACCAAAG+GGG | 0.689132 | tig0028364:-37261 | Msa1437840:intergenic |
CAGAATGAAATTAAGAACTG+CGG | 0.691345 | tig0028364:-37345 | Msa1437840:intergenic |
TCACTTCGGGAAGTTAAGCG+CGG | 0.698956 | tig0028364:-28350 | Msa1437840:intergenic |
AATTGAAAGAAAATTAACAG+TGG | 0.699468 | tig0028364:-28168 | Msa1437840:intergenic |
ATCACCGAGACGATCAACGA+CGG | 0.704575 | tig0028364:-28653 | Msa1437840:intergenic |
ATCAGACTGAGATAAAACAA+TGG | 0.711078 | tig0028364:-41863 | Msa1437840:intergenic |
ATTAACCGGGAAAAGACGTG+TGG | 0.712845 | tig0028364:-37005 | Msa1437840:intergenic |
CTGTGAAAGAAGTACACCAG+AGG | 0.717289 | tig0028364:-35893 | Msa1437840:intergenic |
GCAGATGTTCCATAACCAGG+TGG | 0.726100 | tig0028364:-35820 | Msa1437840:intergenic |
GAAGTGCACCTTGAGAGACA+CGG | 0.738059 | tig0028364:-28561 | Msa1437840:intergenic |
TTAGCACAATCAGCTATACG+GGG | 0.750481 | tig0028364:-34426 | Msa1437840:intergenic |
TAGATGAAGGAAGATTGTAG+CGG | 0.777937 | tig0028364:-31185 | Msa1437840:intergenic |
ATCCACGAGACAGAAAACAA+CGG | 0.777960 | tig0028364:-45700 | Msa1437840:intergenic |
TGACAATAGTGACATCAGGG+AGG | 0.783231 | tig0028364:+36497 | Msa1437840:CDS |
AGACCGTTAACATCTAAACG+AGG | 0.785577 | tig0028364:-37851 | Msa1437830:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAATAATAAATAATAATAAA+AGG | - | tig0028364:44078-44097 | Msa1437840:intergenic | 0.0% |
!! | AACATACTATTAATAAAAAA+CGG | - | tig0028364:29043-29062 | Msa1437840:intergenic | 10.0% |
!! | ATATAGTAAAAAAAAAATAC+AGG | + | tig0028364:29648-29667 | Msa1437840:intron | 10.0% |
!! | TTAAATTAATATAGAAATGT+TGG | + | tig0028364:30599-30618 | Msa1437840:intron | 10.0% |
!!! | TTTAATTTTACAAATTGATT+TGG | + | tig0028364:30873-30892 | Msa1437840:intron | 10.0% |
!!! | AATGAACAATTTTTTTTTTA+AGG | - | tig0028364:31692-31711 | Msa1437840:intergenic | 10.0% |
!!! | ATTAAAATCTGAAATTATTT+TGG | + | tig0028364:32122-32141 | Msa1437840:intron | 10.0% |
!!! | AATTTTTTTGTCAATATTTA+AGG | + | tig0028364:33553-33572 | Msa1437840:intron | 10.0% |
!! | AATAATAATTTACATAACTT+TGG | + | tig0028364:34778-34797 | Msa1437840:intron | 10.0% |
!! | ATAAAAAATTAGTATAATTG+TGG | + | tig0028364:40256-40275 | Msa1437840:intron | 10.0% |
!! | TAAAAAATTAGTATAATTGT+GGG | + | tig0028364:40257-40276 | Msa1437840:intron | 10.0% |
!!! | TTTTTATCATTAATAATTGT+TGG | + | tig0028364:45592-45611 | Msa1437840:intron | 10.0% |
!!! | TATTGGTTATTACTATTTTT+CGG | + | tig0028364:28914-28933 | Msa1437840:intron | 15.0% |
!!! | TAATTGACATTAAATACTTT+TGG | + | tig0028364:29457-29476 | Msa1437840:intron | 15.0% |
!!! | ATAAAATCATTTTAGTTAGT+TGG | - | tig0028364:29525-29544 | Msa1437840:intergenic | 15.0% |
!! | TTTACTATATATTTAACTGA+AGG | - | tig0028364:29638-29657 | Msa1437840:intergenic | 15.0% |
!! | TAAAAAAAAAATACAGGATT+TGG | + | tig0028364:29654-29673 | Msa1437840:intron | 15.0% |
!! | TTATTGTATGTTATAACTAA+AGG | + | tig0028364:30475-30494 | Msa1437840:intron | 15.0% |
!!! | TCATATTTTATTTAATGCTT+TGG | + | tig0028364:30983-31002 | Msa1437840:intron | 15.0% |
!! | ATATTTATATCAAAACAATC+AGG | - | tig0028364:31238-31257 | Msa1437840:intergenic | 15.0% |
!!! | CATTTAAAATTTTAAACTCA+CGG | + | tig0028364:31273-31292 | Msa1437840:intron | 15.0% |
!! | ATTAAATTGTTTATCTAAAC+AGG | + | tig0028364:33292-33311 | Msa1437840:intron | 15.0% |
!! | TTAAATTGTTTATCTAAACA+GGG | + | tig0028364:33293-33312 | Msa1437840:intron | 15.0% |
!! | GTATAATACAATAAAAATGT+TGG | - | tig0028364:33793-33812 | Msa1437840:intergenic | 15.0% |
!! | ATGATAAAATCTATAGATTT+GGG | - | tig0028364:35288-35307 | Msa1437840:intergenic | 15.0% |
!! | AATGATAAAATCTATAGATT+TGG | - | tig0028364:35289-35308 | Msa1437840:intergenic | 15.0% |
!!! | AATCTATAGATTTTATCATT+TGG | + | tig0028364:35289-35308 | Msa1437840:intron | 15.0% |
!!! | TTATTTTATACTCAATTTTC+AGG | + | tig0028364:36100-36119 | Msa1437840:intron | 15.0% |
!! | AAAATTGATCAAAAAATCAA+AGG | + | tig0028364:38209-38228 | Msa1437840:intron | 15.0% |
!! | TAGTTAGATATTATACTATT+TGG | + | tig0028364:38627-38646 | Msa1437840:intron | 15.0% |
!! | ATTTCTACTATCTAATAATA+AGG | - | tig0028364:39392-39411 | Msa1437840:intergenic | 15.0% |
!!! | AAGAAAAAGTATAAATACTT+TGG | + | tig0028364:39804-39823 | Msa1437840:intron | 15.0% |
!!! | TTAATTATTTATTTCTTTGG+CGG | + | tig0028364:40084-40103 | Msa1437840:intron | 15.0% |
!!! | ATACTAATTTTTTATTCCTA+TGG | - | tig0028364:40251-40270 | Msa1437840:intergenic | 15.0% |
!! | TTATTCATATTTCTTATTGT+AGG | - | tig0028364:40769-40788 | Msa1437840:intergenic | 15.0% |
!!! | CTTTTATATATTTGTAAATG+AGG | + | tig0028364:42145-42164 | Msa1437840:intron | 15.0% |
!!! | TCAAAATATTATTTTAGGTT+CGG | - | tig0028364:42362-42381 | Msa1437840:intergenic | 15.0% |
!!! | TTGGATCAAAATATTATTTT+AGG | - | tig0028364:42367-42386 | Msa1437840:intergenic | 15.0% |
!! | AAAAGAACAAAAAAACAAAT+TGG | - | tig0028364:42416-42435 | Msa1437840:intergenic | 15.0% |
!!! | GTGTGATTTAATTTTTAAAA+AGG | - | tig0028364:42616-42635 | Msa1437840:intergenic | 15.0% |
!!! | ATTTTATATCCTATGTTAAT+TGG | + | tig0028364:42978-42997 | Msa1437840:intron | 15.0% |
!!! | AAAGAATCCATTTTAATAAA+CGG | + | tig0028364:43287-43306 | Msa1437840:intron | 15.0% |
!! | AATTAATCCGTTTATTAAAA+TGG | - | tig0028364:43297-43316 | Msa1437840:intergenic | 15.0% |
!!! | GTTAAATTTGTTTTAATCAT+AGG | - | tig0028364:45062-45081 | Msa1437840:intergenic | 15.0% |
!! | ATGATTAAAACAAATTTAAC+TGG | + | tig0028364:45062-45081 | Msa1437840:intron | 15.0% |
!!! | AAATAATTTTGTTCAAATGA+GGG | - | tig0028364:45373-45392 | Msa1437840:intergenic | 15.0% |
!!! | AAAATAATTTTGTTCAAATG+AGG | - | tig0028364:45374-45393 | Msa1437840:intergenic | 15.0% |
!!! | CATTTGAACAAAATTATTTT+CGG | + | tig0028364:45374-45393 | Msa1437840:intron | 15.0% |
!!! | ATTTGAACAAAATTATTTTC+GGG | + | tig0028364:45375-45394 | Msa1437840:intron | 15.0% |
!! | AAACTATATATATAGAACAA+AGG | - | tig0028364:45982-46001 | Msa1437840:intergenic | 15.0% |
!!! | TTTTTTGACAAAATATTTGT+TGG | + | tig0028364:46042-46061 | Msa1437840:three_prime_UTR | 15.0% |
!!! | ACATTATTGATTGTATTTAA+TGG | + | tig0028364:46119-46138 | Msa1437840:three_prime_UTR | 15.0% |
!! | AATTGAAAGAAAATTAACAG+TGG | - | tig0028364:28171-28190 | None:intergenic | 20.0% |
!! | TTATTGAGTGATTAATTTAG+CGG | - | tig0028364:28282-28301 | None:intergenic | 20.0% |
!!! | CATTGATTGTTTGAATTTAT+TGG | + | tig0028364:28897-28916 | Msa1437840:intron | 20.0% |
!! | GTTGTTTAATTAGTATTGTA+AGG | + | tig0028364:28936-28955 | Msa1437840:intron | 20.0% |
!!! | TTAAATACTTTTGGCATATA+AGG | + | tig0028364:29466-29485 | Msa1437840:intron | 20.0% |
!!! | AATTTTAACAGCAAATGTAT+AGG | + | tig0028364:29545-29564 | Msa1437840:intron | 20.0% |
!! | ACATATATTTAACAAGACAA+AGG | - | tig0028364:29770-29789 | Msa1437840:intergenic | 20.0% |
!! | ATTATGCAATATAAATCAAG+CGG | - | tig0028364:29887-29906 | Msa1437840:intergenic | 20.0% |
!! | GAAATATTATTATTGTTTGC+AGG | + | tig0028364:30114-30133 | Msa1437840:intron | 20.0% |
!! | TATGTTATAACTAAAGGATT+AGG | + | tig0028364:30481-30500 | Msa1437840:intron | 20.0% |
!!! | TAATATTGCATTTTGCTTTT+AGG | + | tig0028364:30665-30684 | Msa1437840:intron | 20.0% |
!! | TTAGGTTTGAAAATAACAAA+CGG | + | tig0028364:30683-30702 | Msa1437840:intron | 20.0% |
!! | AGTTTGAATTCGTTTATTAA+TGG | + | tig0028364:30916-30935 | Msa1437840:intron | 20.0% |
!!! | GTTAGAATATTTTCAATTCT+TGG | + | tig0028364:31551-31570 | Msa1437840:intron | 20.0% |
!! | AAACCCTAAAATAGAAAAAT+GGG | - | tig0028364:31792-31811 | Msa1437840:intergenic | 20.0% |
!!! | TTGAAGTTTTCATATTCAAT+TGG | + | tig0028364:31849-31868 | Msa1437840:intron | 20.0% |
!! | CAAAAAGTAATTAAAGCTTA+AGG | - | tig0028364:32003-32022 | Msa1437840:intergenic | 20.0% |
!!! | ACGTTTTATGAATTTGATTT+TGG | + | tig0028364:32663-32682 | Msa1437840:intron | 20.0% |
!!! | CGTTTTATGAATTTGATTTT+GGG | + | tig0028364:32664-32683 | Msa1437840:intron | 20.0% |
!!! | AATTTGATTTTGGGTTTTTA+TGG | + | tig0028364:32673-32692 | Msa1437840:intron | 20.0% |
!! | TGTCATAAACAATTATAGAA+AGG | + | tig0028364:32732-32751 | Msa1437840:intron | 20.0% |
!! | AAATAAGTTGTTATCCAAAA+CGG | - | tig0028364:32830-32849 | Msa1437840:intergenic | 20.0% |
!! | TTTATTTGAGCTTATATACA+GGG | - | tig0028364:33049-33068 | Msa1437840:intergenic | 20.0% |
!!! | TACTAATACCAAACTAATTT+TGG | + | tig0028364:34042-34061 | Msa1437840:intron | 20.0% |
!! | ATAATTTACATAACTTTGGT+TGG | + | tig0028364:34782-34801 | Msa1437840:intron | 20.0% |
!! | TACAACATTAGACATTTAAT+GGG | - | tig0028364:34881-34900 | Msa1437840:intergenic | 20.0% |
!! | TTACAACATTAGACATTTAA+TGG | - | tig0028364:34882-34901 | Msa1437840:intergenic | 20.0% |
!! | TTGTAAATTGTAAATTCCAT+TGG | + | tig0028364:34896-34915 | Msa1437840:intron | 20.0% |
!! | GTAAAAAATCATATGCTAAT+TGG | + | tig0028364:34932-34951 | Msa1437840:intron | 20.0% |
!! | ATTACTGTGTGAAAATTTAT+AGG | + | tig0028364:35509-35528 | Msa1437840:intron | 20.0% |
!!! | AATTCACTTTAAAATATGAC+TGG | - | tig0028364:35682-35701 | Msa1437840:intergenic | 20.0% |
!!! | ATTTTAAACTATTTCATGGT+TGG | + | tig0028364:36123-36142 | Msa1437840:intron | 20.0% |
!! | ATATTGGCATATTAAAATTG+TGG | + | tig0028364:37225-37244 | Msa1437840:CDS | 20.0% |
!!! | ACTGATTCATTTATACTTTT+TGG | - | tig0028364:38310-38329 | Msa1437840:intergenic | 20.0% |
!! | ATTTGAATAATGAAGTTTGA+TGG | - | tig0028364:38898-38917 | Msa1437840:intergenic | 20.0% |
!! | ATAATATCAATATCAGAGAT+AGG | - | tig0028364:38988-39007 | Msa1437840:intergenic | 20.0% |
!! | ATCTCTGATATTGATATTAT+AGG | + | tig0028364:38988-39007 | Msa1437840:intron | 20.0% |
!! | TCTCTGATATTGATATTATA+GGG | + | tig0028364:38989-39008 | Msa1437840:intron | 20.0% |
!!! | AGTTTTTCTCATTACTATTT+TGG | + | tig0028364:39450-39469 | Msa1437840:intron | 20.0% |
!!! | TAATTATTTATTTCTTTGGC+GGG | + | tig0028364:40085-40104 | Msa1437840:intron | 20.0% |
!!! | AATTTTTTATTCCTATGGAT+GGG | - | tig0028364:40246-40265 | Msa1437840:intergenic | 20.0% |
!!! | TAATTTTTTATTCCTATGGA+TGG | - | tig0028364:40247-40266 | Msa1437840:intergenic | 20.0% |
!! | GTCTTATAAAAGAAAATCTA+GGG | - | tig0028364:40311-40330 | Msa1437840:intergenic | 20.0% |
!! | TGTCTTATAAAAGAAAATCT+AGG | - | tig0028364:40312-40331 | Msa1437840:intergenic | 20.0% |
!!! | GATTTGATTTTGATTCAAAA+AGG | + | tig0028364:40666-40685 | Msa1437840:intron | 20.0% |
!! | ATAAATAAGTGTTAGTAACT+TGG | - | tig0028364:40699-40718 | Msa1437840:intergenic | 20.0% |
!! | ACACTTATTTATATTACTAC+AGG | + | tig0028364:40707-40726 | Msa1437840:intron | 20.0% |
!! | CTCTGAATCATAATTAAATA+AGG | + | tig0028364:40731-40750 | Msa1437840:intron | 20.0% |
!! | TCTATATTCTATTGTTGTAT+TGG | + | tig0028364:41074-41093 | Msa1437840:intron | 20.0% |
!!! | TTTTTGGGATTTCAATAATA+TGG | + | tig0028364:41590-41609 | Msa1437840:intron | 20.0% |
!!! | AAGGATAAGAAAATACATTT+TGG | - | tig0028364:42386-42405 | Msa1437840:intergenic | 20.0% |
!! | TTTCATAAATTTGAATTGTG+CGG | + | tig0028364:42433-42452 | Msa1437840:intron | 20.0% |
!! | TTAAAAAGGCTTAATACATT+TGG | - | tig0028364:42602-42621 | Msa1437840:intergenic | 20.0% |
!! | TGAATATGTTTATGTATTCT+AGG | + | tig0028364:43181-43200 | Msa1437840:intron | 20.0% |
!!! | CTTACATTTTCTGAAATTTT+TGG | + | tig0028364:43492-43511 | Msa1437840:intron | 20.0% |
!!! | TGAAACAGATAACTATTTTA+AGG | - | tig0028364:43648-43667 | Msa1437840:intergenic | 20.0% |
!!! | ATATTGATGAGAAATCATTT+TGG | + | tig0028364:43669-43688 | Msa1437840:intron | 20.0% |
!!! | ATATTTTGAAAACTTGCAAT+GGG | + | tig0028364:44895-44914 | Msa1437840:intron | 20.0% |
!! | ATTACTTGCAAATACATTAT+TGG | - | tig0028364:45093-45112 | Msa1437840:intergenic | 20.0% |
!!! | ATTACTTTTTCTTTTTACCA+TGG | - | tig0028364:45125-45144 | Msa1437840:intergenic | 20.0% |
!! | ACAAACAAGTTTATGTTTAT+AGG | - | tig0028364:45254-45273 | Msa1437840:intergenic | 20.0% |
!! | TTCTATTAATGCATTTCTTA+TGG | - | tig0028364:45298-45317 | Msa1437840:intergenic | 20.0% |
!!! | AATAATTTTGTTCAAATGAG+GGG | - | tig0028364:45372-45391 | Msa1437840:intergenic | 20.0% |
!!! | ATATTTCATTATTTTGTCAG+CGG | - | tig0028364:45484-45503 | Msa1437840:intergenic | 20.0% |
!!! | CATTGCTCATTTTATTTAAA+TGG | + | tig0028364:45663-45682 | Msa1437840:intron | 20.0% |
!!! | TAAAGAAAATTTGTGTGTTT+TGG | + | tig0028364:45874-45893 | Msa1437840:three_prime_UTR | 20.0% |
!!! | AAAGAAAATTTGTGTGTTTT+GGG | + | tig0028364:45875-45894 | Msa1437840:three_prime_UTR | 20.0% |
!!! | ACAAAATATTTGTTGGAATT+TGG | + | tig0028364:46049-46068 | Msa1437840:three_prime_UTR | 20.0% |
! | AAAAGGATATGATGAATGAA+TGG | - | tig0028364:28207-28226 | None:intergenic | 25.0% |
! | TTCAGATCTAATAATCACTT+CGG | - | tig0028364:28367-28386 | None:intergenic | 25.0% |
!! | AATCGAATTTGAAGTTTAGA+TGG | + | tig0028364:28777-28796 | Msa1437840:intron | 25.0% |
! | TGAAGTTTAGATGGTAATTA+CGG | + | tig0028364:28786-28805 | Msa1437840:intron | 25.0% |
! | TTGTTAGAATATTTGCATGA+AGG | + | tig0028364:28864-28883 | Msa1437840:intron | 25.0% |
! | GAAAAAATGACATAGTTGAA+AGG | + | tig0028364:29165-29184 | Msa1437840:intron | 25.0% |
! | AGGTAGTAGTTAAAATAATC+TGG | + | tig0028364:29486-29505 | Msa1437840:intron | 25.0% |
! | ATCTCACATTTGTTCATTAT+AGG | - | tig0028364:29733-29752 | Msa1437840:intergenic | 25.0% |
! | AAATGTGAGATGATTAAGTT+TGG | + | tig0028364:29742-29761 | Msa1437840:intron | 25.0% |
!! | AACATTATGCATTTTACTGT+TGG | - | tig0028364:30051-30070 | Msa1437840:intergenic | 25.0% |
! | ATAATGTTTCATGTGTATTC+TGG | + | tig0028364:30063-30082 | Msa1437840:intron | 25.0% |
!! | TTGTACGGTTAAATTGTTTT+AGG | + | tig0028364:30331-30350 | Msa1437840:intron | 25.0% |
!! | GAATTTTATACATGCATCAT+GGG | - | tig0028364:30571-30590 | Msa1437840:intergenic | 25.0% |
!! | AGAATTTTATACATGCATCA+TGG | - | tig0028364:30572-30591 | Msa1437840:intergenic | 25.0% |
! | AAGAACAAAAAAGTTGAAGT+GGG | + | tig0028364:30717-30736 | Msa1437840:intron | 25.0% |
! | ATTAATACTATAATCTCAGC+CGG | + | tig0028364:30800-30819 | Msa1437840:intron | 25.0% |
! | TTGATATATACCATAGATGA+AGG | - | tig0028364:31201-31220 | Msa1437840:intergenic | 25.0% |
!! | AAATTTTAAACTCACGGATA+TGG | + | tig0028364:31279-31298 | Msa1437840:intron | 25.0% |
! | GCTGATAGTAAAATGTAAAA+CGG | - | tig0028364:31316-31335 | Msa1437840:intergenic | 25.0% |
!! | ATTTTACTATCAGCTATTGT+GGG | + | tig0028364:31322-31341 | Msa1437840:intron | 25.0% |
! | TATTTCTCATTGTATCATGA+TGG | + | tig0028364:31356-31375 | Msa1437840:intron | 25.0% |
! | ATTATAGAACCTGTAAAAGA+GGG | - | tig0028364:31654-31673 | Msa1437840:intergenic | 25.0% |
! | AATTATAGAACCTGTAAAAG+AGG | - | tig0028364:31655-31674 | Msa1437840:intergenic | 25.0% |
!!! | AGATCCCATTTTTCTATTTT+AGG | + | tig0028364:31785-31804 | Msa1437840:intron | 25.0% |
!!! | GATCCCATTTTTCTATTTTA+GGG | + | tig0028364:31786-31805 | Msa1437840:intron | 25.0% |
! | CAAACCCTAAAATAGAAAAA+TGG | - | tig0028364:31793-31812 | Msa1437840:intergenic | 25.0% |
!! | TTTAGGGTTTGAATTTATAG+TGG | + | tig0028364:31802-31821 | Msa1437840:intron | 25.0% |
! | GATTGATGCAAAAAAACAAA+AGG | - | tig0028364:31894-31913 | Msa1437840:intergenic | 25.0% |
!! | TTTTTGCATCAATCTGTTTT+TGG | + | tig0028364:31900-31919 | Msa1437840:intron | 25.0% |
!!! | CTTTAATTACTTTTTGCCTT+GGG | + | tig0028364:32007-32026 | Msa1437840:intron | 25.0% |
! | TCTTCTGTATTTCAATGAAA+AGG | + | tig0028364:32066-32085 | Msa1437840:intron | 25.0% |
!!! | ATCTGAAATTATTTTGGTAG+TGG | + | tig0028364:32128-32147 | Msa1437840:intron | 25.0% |
! | TTGTTTGCAAATTTACAACT+AGG | - | tig0028364:32179-32198 | Msa1437840:intergenic | 25.0% |
! | AATAAGTTGTTATCCAAAAC+GGG | - | tig0028364:32829-32848 | Msa1437840:intergenic | 25.0% |
!!! | TCTTATTTTACTTTTTGCTG+AGG | - | tig0028364:32890-32909 | Msa1437840:intergenic | 25.0% |
!! | TGTGTTTTCATAAACTATCT+TGG | + | tig0028364:32936-32955 | Msa1437840:intron | 25.0% |
! | GTTTATTTGAGCTTATATAC+AGG | - | tig0028364:33050-33069 | Msa1437840:intergenic | 25.0% |
!! | GTAAACTTTTGTTCCATTTT+AGG | + | tig0028364:33351-33370 | Msa1437840:intron | 25.0% |
!! | TTTAAGATGATAAACAAAGC+AGG | - | tig0028364:33966-33985 | Msa1437840:intergenic | 25.0% |
! | AGAGAAAACCAAAATTAGTT+TGG | - | tig0028364:34053-34072 | Msa1437840:intergenic | 25.0% |
!!! | TTTTCTCTTTGCTGTATTAT+AGG | + | tig0028364:34065-34084 | Msa1437840:intron | 25.0% |
!! | TTGACAAAAAGCACAATAAA+TGG | - | tig0028364:34095-34114 | Msa1437840:intergenic | 25.0% |
!!! | TTTATTGTGCTTTTTGTCAA+AGG | + | tig0028364:34095-34114 | Msa1437840:CDS | 25.0% |
! | TAATTCTTGATCTGATAATC+AGG | + | tig0028364:34217-34236 | Msa1437840:intron | 25.0% |
!! | ATAAAAGGCATAAAAAGATG+CGG | - | tig0028364:34337-34356 | Msa1437840:intergenic | 25.0% |
!!! | TAAGTGACTTGAGAATTTTT+TGG | + | tig0028364:34500-34519 | Msa1437840:intron | 25.0% |
!!! | ATTTGACTAGCTTTTTCATT+AGG | + | tig0028364:34730-34749 | Msa1437840:intron | 25.0% |
! | ATTATGTCTAACCAAAGAAA+AGG | + | tig0028364:35056-35075 | Msa1437840:intron | 25.0% |
! | TTATGTCTAACCAAAGAAAA+GGG | + | tig0028364:35057-35076 | Msa1437840:intron | 25.0% |
!! | CTTACAACACAATTTCTTTT+TGG | - | tig0028364:35193-35212 | Msa1437840:intergenic | 25.0% |
!! | ATCATTTGGAACACATTATT+TGG | + | tig0028364:35303-35322 | Msa1437840:intron | 25.0% |
! | TTTCATCATATAATGATGCT+TGG | + | tig0028364:35383-35402 | Msa1437840:intron | 25.0% |
!! | ATTTTCATGCACATATACTT+TGG | - | tig0028364:35488-35507 | Msa1437840:intergenic | 25.0% |
! | ATTGCAGTTAATAAATGAAG+AGG | + | tig0028364:35705-35724 | Msa1437840:intron | 25.0% |
! | AATATGTCTGATAAGCATAA+TGG | + | tig0028364:36015-36034 | Msa1437840:CDS | 25.0% |
! | ATCTAGGTACTAAATAAGTT+TGG | + | tig0028364:36064-36083 | Msa1437840:intron | 25.0% |
!! | CAGGATTTTAAACTATTTCA+TGG | + | tig0028364:36119-36138 | Msa1437840:intron | 25.0% |
! | TTGAATTTGAGTGATTATGT+CGG | - | tig0028364:36361-36380 | Msa1437840:intergenic | 25.0% |
! | ATTACTATGATATGATGACT+TGG | - | tig0028364:36400-36419 | Msa1437840:intergenic | 25.0% |
! | TAAAGTTTCCTTCTCTATAA+GGG | - | tig0028364:36569-36588 | Msa1437840:intergenic | 25.0% |
! | TTATAGAGAAGGAAACTTTA+GGG | + | tig0028364:36569-36588 | Msa1437840:CDS | 25.0% |
! | ATTGATTGCAAATTCAATCA+CGG | - | tig0028364:37165-37184 | Msa1437840:intergenic | 25.0% |
!! | ATTCATTGCATGTTTGTTAA+AGG | - | tig0028364:37189-37208 | Msa1437840:intergenic | 25.0% |
!! | TTGCTACAATATGTTTTTCA+TGG | - | tig0028364:38147-38166 | Msa1437840:intergenic | 25.0% |
! | CATATTGTAGCAAAAAAAGT+AGG | + | tig0028364:38154-38173 | Msa1437840:intron | 25.0% |
! | TTTAATAGCCAATGACTTTA+GGG | - | tig0028364:38401-38420 | Msa1437840:intergenic | 25.0% |
!!! | TATCTAGCTGATCATTTTTT+AGG | + | tig0028364:38594-38613 | Msa1437840:intron | 25.0% |
! | ATATCAAATAAAGCATACCT+TGG | - | tig0028364:38785-38804 | Msa1437840:intergenic | 25.0% |
! | ATAACAAAACAGAGTGTATT+TGG | - | tig0028364:38861-38880 | Msa1437840:intergenic | 25.0% |
! | CAAACTTCATTATTCAAATG+TGG | + | tig0028364:38899-38918 | Msa1437840:intron | 25.0% |
! | TGTTTAAACACAAAAGACTA+AGG | + | tig0028364:39062-39081 | Msa1437840:intron | 25.0% |
! | GTTTAAACACAAAAGACTAA+GGG | + | tig0028364:39063-39082 | Msa1437840:intron | 25.0% |
!! | ACTTTTATATATTCTGGTAC+TGG | + | tig0028364:39089-39108 | Msa1437840:intron | 25.0% |
! | CATTATTTAATCAGGATCTT+AGG | - | tig0028364:39124-39143 | Msa1437840:intergenic | 25.0% |
! | CTAAGATCCTGATTAAATAA+TGG | + | tig0028364:39122-39141 | Msa1437840:intron | 25.0% |
! | TTGTTTAACCAAAATGAACA+TGG | + | tig0028364:39240-39259 | Msa1437840:intron | 25.0% |
! | TGTTTAACCAAAATGAACAT+GGG | + | tig0028364:39241-39260 | Msa1437840:intron | 25.0% |
! | TAGATAGTAGAAATCATTGT+TGG | + | tig0028364:39398-39417 | Msa1437840:intron | 25.0% |
! | AATACTTTGGATTGTGATTA+TGG | + | tig0028364:39817-39836 | Msa1437840:intron | 25.0% |
! | ATTGTGATTATGGTTCAATA+AGG | + | tig0028364:39827-39846 | Msa1437840:intron | 25.0% |
! | TATCTTCTCTTTCATGATAT+AGG | - | tig0028364:40223-40242 | Msa1437840:intergenic | 25.0% |
! | TTAGAGAAATCTGTAACAAA+CGG | + | tig0028364:40440-40459 | Msa1437840:intron | 25.0% |
!! | ATAATTTTGTCGAGGTTTTA+GGG | + | tig0028364:40576-40595 | Msa1437840:intron | 25.0% |
!!! | TTTTAGGGTTGAATATAAAG+TGG | + | tig0028364:40591-40610 | Msa1437840:intron | 25.0% |
!! | TTTAGGGTTGAATATAAAGT+GGG | + | tig0028364:40592-40611 | Msa1437840:intron | 25.0% |
! | AATATAAAGTGGGAAAAGAA+AGG | + | tig0028364:40602-40621 | Msa1437840:intron | 25.0% |
! | AAAGAAAGGTTAAAGACTTA+TGG | + | tig0028364:40616-40635 | Msa1437840:intron | 25.0% |
! | TAGATCTAAAGAAATTAGCA+CGG | - | tig0028364:40999-41018 | Msa1437840:intergenic | 25.0% |
! | AAGAACAATATGTCTGATTT+AGG | + | tig0028364:41316-41335 | Msa1437840:intron | 25.0% |
!!! | ATTTTTTTGCGCATAAGTAA+TGG | + | tig0028364:41358-41377 | Msa1437840:intron | 25.0% |
! | ATAAGAGCAGTCTAAAAAAA+TGG | - | tig0028364:41530-41549 | Msa1437840:intergenic | 25.0% |
!! | TCCTATCTATAAGACATTTT+TGG | + | tig0028364:41574-41593 | Msa1437840:intron | 25.0% |
!! | CCTATCTATAAGACATTTTT+GGG | + | tig0028364:41575-41594 | Msa1437840:intron | 25.0% |
!! | TTCATTTGAAACCTGTATAA+GGG | - | tig0028364:41827-41846 | Msa1437840:intergenic | 25.0% |
!! | CTTTTCTCAAACATTTTACA+GGG | - | tig0028364:41948-41967 | Msa1437840:intergenic | 25.0% |
!! | TCTTTTCTCAAACATTTTAC+AGG | - | tig0028364:41949-41968 | Msa1437840:intergenic | 25.0% |
! | AAATGTTTGAGAAAAGAAGA+TGG | + | tig0028364:41952-41971 | Msa1437840:intron | 25.0% |
! | AATGTTTGAGAAAAGAAGAT+GGG | + | tig0028364:41953-41972 | Msa1437840:intron | 25.0% |
!!! | TCAAAGTTTTAAACTGTTTC+AGG | + | tig0028364:42000-42019 | Msa1437840:intron | 25.0% |
! | TTGCATTAATTGCTTAACAA+AGG | + | tig0028364:42069-42088 | Msa1437840:CDS | 25.0% |
!! | GAACAACCTTTTTACTATTT+TGG | + | tig0028364:42104-42123 | Msa1437840:intron | 25.0% |
! | GCATTTCCAAAATAGTAAAA+AGG | - | tig0028364:42113-42132 | Msa1437840:intergenic | 25.0% |
!!! | ATATTATTTTAGGTTCGGTT+TGG | - | tig0028364:42357-42376 | Msa1437840:intergenic | 25.0% |
!!! | AAAACAAATTGGTTTGCAAA+AGG | - | tig0028364:42405-42424 | Msa1437840:intergenic | 25.0% |
!!! | GAAATTTTAACCTCTCAAAA+AGG | + | tig0028364:42466-42485 | Msa1437840:intron | 25.0% |
!!! | AGTATTAATACCTTTTTGAG+AGG | - | tig0028364:42479-42498 | Msa1437840:intergenic | 25.0% |
! | AACCACAAGAAATTAATAAG+CGG | - | tig0028364:42638-42657 | Msa1437840:intergenic | 25.0% |
!! | GGTTTTACTAGTTGTATTTT+AGG | + | tig0028364:42654-42673 | Msa1437840:intron | 25.0% |
!! | AATGATAATGCATGATGAAA+GGG | + | tig0028364:42705-42724 | Msa1437840:intron | 25.0% |
! | CCAAACTAGTAATTTAACAA+CGG | - | tig0028364:42828-42847 | Msa1437840:intergenic | 25.0% |
! | ACTGTTGTATTCATATAATG+TGG | - | tig0028364:43007-43026 | Msa1437840:intergenic | 25.0% |
!!! | TTTTTGGTTGGCAAATAAAT+TGG | - | tig0028364:43571-43590 | Msa1437840:intergenic | 25.0% |
!! | TTAACTTCATACGACATTTT+TGG | - | tig0028364:43778-43797 | Msa1437840:intergenic | 25.0% |
! | AGAAACTAAAACTCAAATGT+TGG | + | tig0028364:43822-43841 | Msa1437840:intron | 25.0% |
! | GAAACTAAAACTCAAATGTT+GGG | + | tig0028364:43823-43842 | Msa1437840:intron | 25.0% |
! | AAACTAAAACTCAAATGTTG+GGG | + | tig0028364:43824-43843 | Msa1437840:intron | 25.0% |
! | AAAACAAGATAGGATTAGAA+AGG | + | tig0028364:43886-43905 | Msa1437840:intron | 25.0% |
! | TGTAAAATGGTTCTTAAATG+AGG | + | tig0028364:44017-44036 | Msa1437840:intron | 25.0% |
!! | CTACAAATTGACTTTGTATT+GGG | - | tig0028364:44784-44803 | Msa1437840:intergenic | 25.0% |
!! | TCTACAAATTGACTTTGTAT+TGG | - | tig0028364:44785-44804 | Msa1437840:intergenic | 25.0% |
!!! | GATATTTTGAAAACTTGCAA+TGG | + | tig0028364:44894-44913 | Msa1437840:intron | 25.0% |
! | ATAACCAAAAAATTGTTGCA+AGG | - | tig0028364:44961-44980 | Msa1437840:intergenic | 25.0% |
! | AACAAATAACTAAGGTAACA+AGG | - | tig0028364:45154-45173 | Msa1437840:intergenic | 25.0% |
! | ACTGAAGTAACAAATAACTA+AGG | - | tig0028364:45162-45181 | Msa1437840:intergenic | 25.0% |
! | AAAGATGTAAGCAAATAGTA+GGG | - | tig0028364:45186-45205 | Msa1437840:intergenic | 25.0% |
! | AAAAGATGTAAGCAAATAGT+AGG | - | tig0028364:45187-45206 | Msa1437840:intergenic | 25.0% |
! | ACAAGTTTATGTTTATAGGA+AGG | - | tig0028364:45250-45269 | Msa1437840:intergenic | 25.0% |
! | TTTCTTATGGCAAATTATAC+TGG | - | tig0028364:45285-45304 | Msa1437840:intergenic | 25.0% |
! | ATAATCCCTCAATTTAAGAA+TGG | - | tig0028364:45339-45358 | Msa1437840:intergenic | 25.0% |
!!! | TATTTCATTATTTTGTCAGC+GGG | - | tig0028364:45483-45502 | Msa1437840:intergenic | 25.0% |
! | AAGAAAGTGATAAATCTGAA+TGG | + | tig0028364:45523-45542 | Msa1437840:intron | 25.0% |
!!! | TGCTCATTTTATTTAAATGG+TGG | + | tig0028364:45666-45685 | Msa1437840:intron | 25.0% |
!!! | CATTTTATTTAAATGGTGGA+TGG | + | tig0028364:45670-45689 | Msa1437840:intron | 25.0% |
! | TGGATATTTATATCATGCTT+GGG | + | tig0028364:45718-45737 | Msa1437840:CDS | 25.0% |
!!! | CCAATTCTAAAATTCTTTCA+CGG | - | tig0028364:45937-45956 | Msa1437840:intergenic | 25.0% |
!!! | CGTGAAAGAATTTTAGAATT+GGG | + | tig0028364:45935-45954 | Msa1437840:three_prime_UTR | 25.0% |
! | GTTCAGTTATTTGAATACTT+TGG | + | tig0028364:46162-46181 | Msa1437840:three_prime_UTR | 25.0% |
GAGAGAAAGTGAATTGAATT+TGG | - | tig0028364:28325-28344 | None:intergenic | 30.0% | |
TCAGATCTAATAATCACTTC+GGG | - | tig0028364:28366-28385 | None:intergenic | 30.0% | |
! | ATTTGGAATATGATATTCCC+AGG | + | tig0028364:29671-29690 | Msa1437840:intron | 30.0% |
! | TGGGCAAATCATTTCTAAAA+TGG | + | tig0028364:29810-29829 | Msa1437840:intron | 30.0% |
!! | ATCATTTCTAAAATGGCCTA+TGG | + | tig0028364:29817-29836 | Msa1437840:intron | 30.0% |
TATCTGTATGACCTTATTGT+AGG | + | tig0028364:29987-30006 | Msa1437840:intron | 30.0% | |
GCTCTTTCAACAATTATTGT+AGG | - | tig0028364:30148-30167 | Msa1437840:intergenic | 30.0% | |
ACAATAATTGTTGAAAGAGC+AGG | + | tig0028364:30148-30167 | Msa1437840:CDS | 30.0% | |
GTAATGTGTAAAGTCAATAC+AGG | - | tig0028364:30292-30311 | Msa1437840:intergenic | 30.0% | |
CAATTTAACCGTACAAAGAA+GGG | - | tig0028364:30327-30346 | Msa1437840:intergenic | 30.0% | |
ACAATTTAACCGTACAAAGA+AGG | - | tig0028364:30328-30347 | Msa1437840:intergenic | 30.0% | |
TTCATGTTAGCTACTGAAAA+AGG | + | tig0028364:30523-30542 | Msa1437840:intron | 30.0% | |
TCATGTTAGCTACTGAAAAA+GGG | + | tig0028364:30524-30543 | Msa1437840:intron | 30.0% | |
GAAGAACAAAAAAGTTGAAG+TGG | + | tig0028364:30716-30735 | Msa1437840:intron | 30.0% | |
!!! | AATTATTTTTCAAGGCCTGT+TGG | + | tig0028364:30834-30853 | Msa1437840:intron | 30.0% |
TGTTTATACTTATACACCTG+AGG | + | tig0028364:31046-31065 | Msa1437840:intron | 30.0% | |
! | TCTTTGACAATCTCTTTTAC+AGG | + | tig0028364:31119-31138 | Msa1437840:intron | 30.0% |
! | CATTTTACTATCAGCTATTG+TGG | + | tig0028364:31321-31340 | Msa1437840:intron | 30.0% |
ATTCCAAGTGGTTATATTAC+CGG | + | tig0028364:31445-31464 | Msa1437840:CDS | 30.0% | |
! | ATTTGAAGTCTTAATTTCCC+CGG | - | tig0028364:31467-31486 | Msa1437840:intergenic | 30.0% |
! | CAATTTTGTACATGCATCAT+GGG | + | tig0028364:31609-31628 | Msa1437840:intron | 30.0% |
GATGTGTTTGTTTAATAGTG+CGG | + | tig0028364:31732-31751 | Msa1437840:intron | 30.0% | |
!!! | GCTTTAATTACTTTTTGCCT+TGG | + | tig0028364:32006-32025 | Msa1437840:intron | 30.0% |
AACATTCGACAACTAAAAGT+AGG | - | tig0028364:32038-32057 | Msa1437840:intergenic | 30.0% | |
!! | TACTTTTAGTTGTCGAATGT+TGG | + | tig0028364:32037-32056 | Msa1437840:intron | 30.0% |
CAAAGAATTTACATGCAATG+TGG | - | tig0028364:32209-32228 | Msa1437840:intergenic | 30.0% | |
TATCGGAGTATATCTTGATA+GGG | - | tig0028364:32361-32380 | Msa1437840:intergenic | 30.0% | |
TTATCGGAGTATATCTTGAT+AGG | - | tig0028364:32362-32381 | Msa1437840:intergenic | 30.0% | |
TATCAAGATATACTCCGATA+AGG | + | tig0028364:32361-32380 | Msa1437840:CDS | 30.0% | |
! | TTGAAATTCCTTTTCAGTTC+AGG | + | tig0028364:32498-32517 | Msa1437840:intron | 30.0% |
!! | GTAGAATATCTTTGACTTGA+AGG | + | tig0028364:32615-32634 | Msa1437840:intron | 30.0% |
TGACATAGTTTCATTGATGA+AGG | - | tig0028364:32717-32736 | Msa1437840:intergenic | 30.0% | |
AGGAAAATAAAATGCTACCA+TGG | + | tig0028364:32752-32771 | Msa1437840:intron | 30.0% | |
GGAAAATAAAATGCTACCAT+GGG | + | tig0028364:32753-32772 | Msa1437840:intron | 30.0% | |
TATCTACTGACATAAACACT+TGG | + | tig0028364:32802-32821 | Msa1437840:intron | 30.0% | |
TCAAATAAACCAATCCAAAC+AGG | + | tig0028364:33060-33079 | Msa1437840:intron | 30.0% | |
! | CTGTTTTCCATAAGCTAAAT+TGG | - | tig0028364:33170-33189 | Msa1437840:intergenic | 30.0% |
TATATGTTAAACGCTTATGC+TGG | + | tig0028364:33260-33279 | Msa1437840:intron | 30.0% | |
! | AACTTTTGTTCCATTTTAGG+AGG | + | tig0028364:33354-33373 | Msa1437840:intron | 30.0% |
CTGTCATTATTTAATGCAAG+TGG | + | tig0028364:33812-33831 | Msa1437840:intron | 30.0% | |
! | AGGCAATCAAATTTTCACAT+TGG | - | tig0028364:33871-33890 | Msa1437840:intergenic | 30.0% |
TTAAATAGAGAAGGATGAAC+AGG | - | tig0028364:33891-33910 | Msa1437840:intergenic | 30.0% | |
! | CCTCAGTTTTTAAATAGAGA+AGG | - | tig0028364:33900-33919 | Msa1437840:intergenic | 30.0% |
CCTTCTCTATTTAAAAACTG+AGG | + | tig0028364:33897-33916 | Msa1437840:intron | 30.0% | |
! | TTTTTGTCAAAGGAACTCTT+GGG | + | tig0028364:34105-34124 | Msa1437840:CDS | 30.0% |
TAAGTTCAACCAGTTATCTT+TGG | + | tig0028364:34163-34182 | Msa1437840:intron | 30.0% | |
TGCAGATAACTGCATAAAAA+CGG | + | tig0028364:34286-34305 | Msa1437840:CDS | 30.0% | |
GTGAAAATGGAACACATAAA+AGG | - | tig0028364:34352-34371 | Msa1437840:intergenic | 30.0% | |
! | TTTTAGCACAATCAGCTATA+CGG | - | tig0028364:34431-34450 | Msa1437840:intergenic | 30.0% |
! | TCTTGTTTGCTCTTTACTTT+AGG | + | tig0028364:34843-34862 | Msa1437840:intron | 30.0% |
CATTAGACATTTAATGGGAA+TGG | - | tig0028364:34876-34895 | Msa1437840:intergenic | 30.0% | |
! | ATGCTAATTGGTTCATTGTT+TGG | + | tig0028364:34944-34963 | Msa1437840:intron | 30.0% |
TATGTCTAACCAAAGAAAAG+GGG | + | tig0028364:35058-35077 | Msa1437840:intron | 30.0% | |
TTTCTCTCTTATGTTCATGT+TGG | - | tig0028364:35162-35181 | Msa1437840:intergenic | 30.0% | |
ATACTTTGGCAACAATAATG+TGG | - | tig0028364:35474-35493 | Msa1437840:intergenic | 30.0% | |
CAGTTAATAAATGAAGAGGA+TGG | + | tig0028364:35709-35728 | Msa1437840:intron | 30.0% | |
TTAATAAATGAAGAGGATGG+AGG | + | tig0028364:35712-35731 | Msa1437840:CDS | 30.0% | |
! | TAGAAGTTCAAGTTTATCGT+CGG | + | tig0028364:35858-35877 | Msa1437840:CDS | 30.0% |
TTAAACTATTTCATGGTTGG+TGG | + | tig0028364:36126-36145 | Msa1437840:intron | 30.0% | |
! | TTTTGTAAACTCTTCATGAG+CGG | + | tig0028364:36163-36182 | Msa1437840:intron | 30.0% |
TATAAAGGTAGTAACCGAAA+TGG | + | tig0028364:36321-36340 | Msa1437840:CDS | 30.0% | |
ATCCTCATATTCAACTAGAA+GGG | + | tig0028364:36440-36459 | Msa1437840:CDS | 30.0% | |
! | CTTCTGAAAGATTACAAGAA+AGG | + | tig0028364:36463-36482 | Msa1437840:CDS | 30.0% |
AAAGTTTCCTTCTCTATAAG+GGG | - | tig0028364:36568-36587 | Msa1437840:intergenic | 30.0% | |
CTAAAGTTTCCTTCTCTATA+AGG | - | tig0028364:36570-36589 | Msa1437840:intergenic | 30.0% | |
CTTATAGAGAAGGAAACTTT+AGG | + | tig0028364:36568-36587 | Msa1437840:CDS | 30.0% | |
GAAATGTCAAGTTATTCAGA+TGG | + | tig0028364:36708-36727 | Msa1437840:CDS | 30.0% | |
!! | AGTTGTTCAGAATTTTGAGA+AGG | + | tig0028364:36854-36873 | Msa1437840:CDS | 30.0% |
TATTCTTGTCATGAACCAAA+GGG | - | tig0028364:37265-37284 | Msa1437840:intergenic | 30.0% | |
CAGAATGAAATTAAGAACTG+CGG | - | tig0028364:37348-37367 | Msa1437840:intergenic | 30.0% | |
TGTTCTGTAGATAGTTTACT+AGG | - | tig0028364:37442-37461 | Msa1437840:intergenic | 30.0% | |
TCATTACCTTGGAAGATATT+CGG | + | tig0028364:37556-37575 | Msa1437840:CDS | 30.0% | |
ACTGAATATGCAAGATCTTT+GGG | - | tig0028364:37746-37765 | Msa1437840:intergenic | 30.0% | |
! | AATCCAATGGGTCAAAATTT+TGG | + | tig0028364:37767-37786 | Msa1437840:CDS | 30.0% |
! | TCATTAGAGCGTTTAAATGT+TGG | + | tig0028364:37878-37897 | Msa1437840:CDS | 30.0% |
CATTCCTCAAATTCTTCATA+TGG | + | tig0028364:38003-38022 | Msa1437840:CDS | 30.0% | |
AATCATCAGCTCAAGAAAAA+AGG | + | tig0028364:38186-38205 | Msa1437840:intron | 30.0% | |
!! | ATTTGCTGAGTACTGATAAT+TGG | + | tig0028364:38241-38260 | Msa1437840:intron | 30.0% |
! | CTTTTTGGATTGAGTAAACA+GGG | - | tig0028364:38295-38314 | Msa1437840:intergenic | 30.0% |
! | ACTTTTTGGATTGAGTAAAC+AGG | - | tig0028364:38296-38315 | Msa1437840:intergenic | 30.0% |
TTAATAGCCAATGACTTTAG+GGG | - | tig0028364:38400-38419 | Msa1437840:intergenic | 30.0% | |
GTTTAATAGCCAATGACTTT+AGG | - | tig0028364:38402-38421 | Msa1437840:intergenic | 30.0% | |
CATACAAAAGATACAAGGAA+AGG | - | tig0028364:38424-38443 | Msa1437840:intergenic | 30.0% | |
!! | TAGGCCAATTTTAGAGATTT+AGG | - | tig0028364:38506-38525 | Msa1437840:intergenic | 30.0% |
!!! | GCTGCTTTTAATCAATCTAT+AGG | - | tig0028364:38525-38544 | Msa1437840:intergenic | 30.0% |
! | TTTTACATTGTAGCATGATG+TGG | - | tig0028364:38547-38566 | Msa1437840:intergenic | 30.0% |
TAAAAACAAATGTCTGCTAG+TGG | + | tig0028364:38562-38581 | Msa1437840:intron | 30.0% | |
AATAACAGCTAAACAACATG+GGG | - | tig0028364:38831-38850 | Msa1437840:intergenic | 30.0% | |
CAATAACAGCTAAACAACAT+GGG | - | tig0028364:38832-38851 | Msa1437840:intergenic | 30.0% | |
! | CATTATTTTCTTTCTTCCCT+CGG | - | tig0028364:39024-39043 | Msa1437840:intergenic | 30.0% |
! | GGGCTAACTTTTATATATTC+TGG | + | tig0028364:39083-39102 | Msa1437840:intron | 30.0% |
! | TCCTGATTAAATAATGGAGT+TGG | + | tig0028364:39128-39147 | Msa1437840:intron | 30.0% |
TCCAACTCCATTATTTAATC+AGG | - | tig0028364:39132-39151 | Msa1437840:intergenic | 30.0% | |
GATAGGATCAAACTTTATCT+GGG | + | tig0028364:39551-39570 | Msa1437840:intron | 30.0% | |
TTTCAAGATGTAAGTGAAGT+TGG | + | tig0028364:39692-39711 | Msa1437840:intron | 30.0% | |
TCAATAAGGAAAAGACATCA+TGG | + | tig0028364:39841-39860 | Msa1437840:intron | 30.0% | |
CAATAAGGAAAAGACATCAT+GGG | + | tig0028364:39842-39861 | Msa1437840:intron | 30.0% | |
TTCTCGAAAATGATAGTCTT+TGG | + | tig0028364:40042-40061 | Msa1437840:intron | 30.0% | |
! | GTCTTTGGAAAATCATGTTT+AGG | + | tig0028364:40057-40076 | Msa1437840:intron | 30.0% |
!!! | TGTTTTGGAAGGTTATTACT+AGG | + | tig0028364:40109-40128 | Msa1437840:intron | 30.0% |
GGTAAGTTCAAAAACATGTT+TGG | + | tig0028364:40130-40149 | Msa1437840:intron | 30.0% | |
AGGTTATGTAAAATATTCCC+AGG | - | tig0028364:40541-40560 | Msa1437840:intergenic | 30.0% | |
ATTATCTGTGTGTTTGTTTG+AGG | - | tig0028364:40561-40580 | Msa1437840:intergenic | 30.0% | |
! | GATAATTTTGTCGAGGTTTT+AGG | + | tig0028364:40575-40594 | Msa1437840:intron | 30.0% |
AGGTTAAAGACTTATGGATA+TGG | + | tig0028364:40622-40641 | Msa1437840:intron | 30.0% | |
GATATGGTTTGATATCATTG+TGG | + | tig0028364:40638-40657 | Msa1437840:intron | 30.0% | |
TAACATAAGAAACCAATCCT+GGG | + | tig0028364:40808-40827 | Msa1437840:intron | 30.0% | |
TGAAACATCTACAAATCTGT+TGG | - | tig0028364:40858-40877 | Msa1437840:intergenic | 30.0% | |
ATTGGTGTATTCTTAGAATC+TGG | + | tig0028364:41092-41111 | Msa1437840:intron | 30.0% | |
TTGGTGTATTCTTAGAATCT+GGG | + | tig0028364:41093-41112 | Msa1437840:intron | 30.0% | |
ATACTTGTGCTAAATGTGAA+GGG | - | tig0028364:41218-41237 | Msa1437840:intergenic | 30.0% | |
CATAAGTAATGGTAGTTTCA+TGG | + | tig0028364:41369-41388 | Msa1437840:intron | 30.0% | |
! | GTACTTCAATCAGATTTTGA+CGG | + | tig0028364:41402-41421 | Msa1437840:intron | 30.0% |
CCCAAAAATGTCTTATAGAT+AGG | - | tig0028364:41578-41597 | Msa1437840:intergenic | 30.0% | |
TACAAAAGATATCGTTCCTA+AGG | + | tig0028364:41729-41748 | Msa1437840:CDS | 30.0% | |
! | CTTCATTTGAAACCTGTATA+AGG | - | tig0028364:41828-41847 | Msa1437840:intergenic | 30.0% |
ATCAGACTGAGATAAAACAA+TGG | - | tig0028364:41866-41885 | Msa1437840:intergenic | 30.0% | |
ATATATTTGTAAATGAGGCG+AGG | + | tig0028364:42150-42169 | Msa1437840:intron | 30.0% | |
!! | GCAAAAGGTGTTTACATATA+GGG | - | tig0028364:42524-42543 | Msa1437840:intergenic | 30.0% |
! | ACCTTTTGCCTCTAATAAAA+GGG | + | tig0028364:42535-42554 | Msa1437840:intron | 30.0% |
!! | ATAAAAGGGTGCTTAGATTT+AGG | + | tig0028364:42549-42568 | Msa1437840:intron | 30.0% |
!! | TAAAAGGGTGCTTAGATTTA+GGG | + | tig0028364:42550-42569 | Msa1437840:intron | 30.0% |
CTTTCATCATGCATTATCAT+TGG | - | tig0028364:42706-42725 | Msa1437840:intergenic | 30.0% | |
! | CAATGATAATGCATGATGAA+AGG | + | tig0028364:42704-42723 | Msa1437840:intron | 30.0% |
CGAAGTTTATTCTTTGCTAA+TGG | + | tig0028364:42753-42772 | Msa1437840:intron | 30.0% | |
CCGTTGTTAAATTACTAGTT+TGG | + | tig0028364:42825-42844 | Msa1437840:intron | 30.0% | |
TTTAATGGTTCAGTTTGGTT+CGG | + | tig0028364:42860-42879 | Msa1437840:intron | 30.0% | |
GATACTTGTAAAACATATCG+TGG | + | tig0028364:42933-42952 | Msa1437840:intron | 30.0% | |
TGTATCGTATGATACAGATA+TGG | - | tig0028364:43242-43261 | Msa1437840:intergenic | 30.0% | |
!! | GGATTCTTTTCTAAGAAGAA+TGG | - | tig0028364:43276-43295 | Msa1437840:intergenic | 30.0% |
!!! | TCAAACATCTGATTTTTGGT+TGG | - | tig0028364:43583-43602 | Msa1437840:intergenic | 30.0% |
TGTCACTAATTGAAACATCT+TGG | + | tig0028364:43707-43726 | Msa1437840:intron | 30.0% | |
! | TTTTTGGATGATGAATGTTG+AGG | - | tig0028364:43762-43781 | Msa1437840:intergenic | 30.0% |
ATTAGAAAGGAATGCATACA+AGG | + | tig0028364:43899-43918 | Msa1437840:intron | 30.0% | |
TTAGAAAGGAATGCATACAA+GGG | + | tig0028364:43900-43919 | Msa1437840:intron | 30.0% | |
GAGGTAGATTAGATGTAAAA+TGG | + | tig0028364:44004-44023 | Msa1437840:intron | 30.0% | |
AATAAAAGGCTAGACTGTAT+TGG | - | tig0028364:44064-44083 | Msa1437840:intergenic | 30.0% | |
AAAAATTGTTGCAAGGATGT+GGG | - | tig0028364:44954-44973 | Msa1437840:intergenic | 30.0% | |
AAAAAATTGTTGCAAGGATG+TGG | - | tig0028364:44955-44974 | Msa1437840:intergenic | 30.0% | |
!!! | ACATCCTTGCAACAATTTTT+TGG | + | tig0028364:44954-44973 | Msa1437840:intron | 30.0% |
TTAATCATAGGTCATGACAT+GGG | - | tig0028364:45050-45069 | Msa1437840:intergenic | 30.0% | |
TTTAATCATAGGTCATGACA+TGG | - | tig0028364:45051-45070 | Msa1437840:intergenic | 30.0% | |
AATACAAGGAGTTCTATACA+TGG | - | tig0028364:45417-45436 | Msa1437840:intergenic | 30.0% | |
! | GTATAGAACTCCTTGTATTT+TGG | + | tig0028364:45418-45437 | Msa1437840:intron | 30.0% |
AAATCTGAATGGCTTAAATC+TGG | + | tig0028364:45534-45553 | Msa1437840:intron | 30.0% | |
!!! | CTGGTTCTATTCTTTTAATG+AGG | + | tig0028364:45557-45576 | Msa1437840:intron | 30.0% |
GTGGATATTTATATCATGCT+TGG | + | tig0028364:45717-45736 | Msa1437840:CDS | 30.0% | |
!!! | CCGTGAAAGAATTTTAGAAT+TGG | + | tig0028364:45934-45953 | Msa1437840:three_prime_UTR | 30.0% |
TTCAAATAACTGAACCAATG+CGG | - | tig0028364:46157-46176 | Msa1437840:intergenic | 30.0% | |
!! | ATTAACAGTGGTGTTGTTGA+GGG | - | tig0028364:28159-28178 | None:intergenic | 35.0% |
!! | AATTAACAGTGGTGTTGTTG+AGG | - | tig0028364:28160-28179 | None:intergenic | 35.0% |
! | TTCTAGAAGCTTCTAGAAGA+TGG | - | tig0028364:28471-28490 | Msa1437840:intergenic | 35.0% |
AGTTTAGATGGTAATTACGG+TGG | + | tig0028364:28789-28808 | Msa1437840:intron | 35.0% | |
TTTGCGTCTTTCAACTCTAA+TGG | + | tig0028364:29001-29020 | Msa1437840:intron | 35.0% | |
TGTGTTTCTTAGTGCTCATT+AGG | - | tig0028364:29071-29090 | Msa1437840:intergenic | 35.0% | |
! | ATAGTTTGTAGACCAGTACA+GGG | - | tig0028364:29603-29622 | Msa1437840:intergenic | 35.0% |
AGGCACTACAATGTTTACTT+CGG | - | tig0028364:29713-29732 | Msa1437840:intergenic | 35.0% | |
!! | CAGCTTAACTTGTTAACCAT+AGG | - | tig0028364:29836-29855 | Msa1437840:intergenic | 35.0% |
CTATGGTTAACAAGTTAAGC+TGG | + | tig0028364:29834-29853 | Msa1437840:intron | 35.0% | |
CATGTCAAACTTCGTTCATT+TGG | - | tig0028364:29941-29960 | Msa1437840:intergenic | 35.0% | |
CAAATGAACGAAGTTTGACA+TGG | + | tig0028364:29939-29958 | Msa1437840:intron | 35.0% | |
TAAATCCTACTTTGACCCAT+TGG | - | tig0028364:29965-29984 | Msa1437840:intergenic | 35.0% | |
TGTATGACCTTATTGTAGGT+TGG | + | tig0028364:29991-30010 | Msa1437840:intron | 35.0% | |
GTATGACCTTATTGTAGGTT+GGG | + | tig0028364:29992-30011 | Msa1437840:intron | 35.0% | |
ATGTGTAAAGTCAATACAGG+AGG | - | tig0028364:30289-30308 | Msa1437840:intergenic | 35.0% | |
TCAACACATGATCTATTGTC+AGG | + | tig0028364:30372-30391 | Msa1437840:intron | 35.0% | |
TGACCCAAATCTTTCTGTTA+GGG | + | tig0028364:30411-30430 | Msa1437840:CDS | 35.0% | |
CTTCCCTAACAGAAAGATTT+GGG | - | tig0028364:30417-30436 | Msa1437840:intergenic | 35.0% | |
! | CTATTTTGTGCATTGAGGTA+TGG | + | tig0028364:30440-30459 | Msa1437840:intron | 35.0% |
TGCATCATGGGTTTATCTTA+AGG | - | tig0028364:31621-31640 | Msa1437840:intergenic | 35.0% | |
GCTATCAAGTATCTTAGTCT+TGG | + | tig0028364:30621-30640 | Msa1437840:intron | 35.0% | |
AGTTGAAGTGGGTATAATGT+AGG | + | tig0028364:30728-30747 | Msa1437840:intron | 35.0% | |
TGAAGTTCATCACGAAATTG+AGG | - | tig0028364:31165-31184 | Msa1437840:intergenic | 35.0% | |
TAGATGAAGGAAGATTGTAG+CGG | - | tig0028364:31188-31207 | Msa1437840:intergenic | 35.0% | |
CTACAATCTTCCTTCATCTA+TGG | + | tig0028364:31188-31207 | Msa1437840:CDS | 35.0% | |
CATTGTATCATGATGGTTTC+AGG | + | tig0028364:31363-31382 | Msa1437840:intron | 35.0% | |
AGGTGAAAGATATTAATGCC+AGG | + | tig0028364:31383-31402 | Msa1437840:intron | 35.0% | |
ATATTAATGCCAGGCTAGAA+GGG | + | tig0028364:31392-31411 | Msa1437840:CDS | 35.0% | |
TTCCAAGTGGTTATATTACC+GGG | + | tig0028364:31446-31465 | Msa1437840:CDS | 35.0% | |
AAAGGCCAAAAGTTCTTCAA+GGG | + | tig0028364:31510-31529 | Msa1437840:CDS | 35.0% | |
ATTCTAACCTCCAAAAAGAG+AGG | - | tig0028364:31539-31558 | Msa1437840:intergenic | 35.0% | |
! | GCAATTTTGTACATGCATCA+TGG | + | tig0028364:31608-31627 | Msa1437840:intron | 35.0% |
AGTTATGCCTACATCGTAAT+TGG | + | tig0028364:31970-31989 | Msa1437840:intron | 35.0% | |
GTTATGCCTACATCGTAATT+GGG | + | tig0028364:31971-31990 | Msa1437840:intron | 35.0% | |
TAGAATCCCAATTACGATGT+AGG | - | tig0028364:31980-31999 | Msa1437840:intergenic | 35.0% | |
TATATCTTGATAGGGTCTAC+AGG | - | tig0028364:32353-32372 | Msa1437840:intergenic | 35.0% | |
!! | AGAATTGAAGGTCTTGTTCT+AGG | + | tig0028364:32464-32483 | Msa1437840:CDS | 35.0% |
TACACAATCCTGAACTGAAA+AGG | - | tig0028364:32509-32528 | Msa1437840:intergenic | 35.0% | |
!! | ATATCTTTGACTTGAAGGAC+TGG | + | tig0028364:32620-32639 | Msa1437840:intron | 35.0% |
! | AAGCTCTCCAATTTAGCTTA+TGG | + | tig0028364:33160-33179 | Msa1437840:intron | 35.0% |
TGTTTATCTAAACAGGGTCT+AGG | + | tig0028364:33299-33318 | Msa1437840:intron | 35.0% | |
GATCCCAGTTCTATAAAACT+GGG | + | tig0028364:33387-33406 | Msa1437840:intron | 35.0% | |
ATCCCAGTTCTATAAAACTG+GGG | + | tig0028364:33388-33407 | Msa1437840:intron | 35.0% | |
TTCTTAATACTCTCCTTGTC+AGG | + | tig0028364:33665-33684 | Msa1437840:intron | 35.0% | |
TCTGACAATTGTGTGCTTAA+AGG | - | tig0028364:33740-33759 | Msa1437840:intergenic | 35.0% | |
TTGTGAATGTTCTCTGTTGA+AGG | + | tig0028364:33921-33940 | Msa1437840:intron | 35.0% | |
!! | CTATCCATTGACTTTGTCAT+AGG | + | tig0028364:33999-34018 | Msa1437840:intron | 35.0% |
! | CTTTTTGTCAAAGGAACTCT+TGG | + | tig0028364:34104-34123 | Msa1437840:CDS | 35.0% |
AGATAACTGGTTGAACTTAC+TGG | - | tig0028364:34162-34181 | Msa1437840:intergenic | 35.0% | |
TAATCACAACCAGCTTGAAA+AGG | - | tig0028364:34244-34263 | Msa1437840:intergenic | 35.0% | |
TTTAGCACAATCAGCTATAC+GGG | - | tig0028364:34430-34449 | Msa1437840:intergenic | 35.0% | |
CTGATTGTGCTAAAAATGAC+CGG | + | tig0028364:34436-34455 | Msa1437840:CDS | 35.0% | |
TACAATTTCAGTATCGCCAA+TGG | - | tig0028364:34915-34934 | Msa1437840:intergenic | 35.0% | |
GCTTTATGTCTCGATATTGT+CGG | + | tig0028364:34966-34985 | Msa1437840:intron | 35.0% | |
TCATGTCCCTTAAGAAAATC+AGG | + | tig0028364:35233-35252 | Msa1437840:intron | 35.0% | |
CATGTCCCTTAAGAAAATCA+GGG | + | tig0028364:35234-35253 | Msa1437840:intron | 35.0% | |
! | TCTGACCCTGATTTTCTTAA+GGG | - | tig0028364:35242-35261 | Msa1437840:intergenic | 35.0% |
TTTGGCAACAATAATGTGGT+TGG | - | tig0028364:35470-35489 | Msa1437840:intergenic | 35.0% | |
ACAGAATGTTCGCAAAAACT+TGG | + | tig0028364:35556-35575 | Msa1437840:CDS | 35.0% | |
AACATCTGCAATTGTTGCAA+TGG | + | tig0028364:35834-35853 | Msa1437840:CDS | 35.0% | |
! | AGAAGTTCAAGTTTATCGTC+GGG | + | tig0028364:35859-35878 | Msa1437840:CDS | 35.0% |
TGAAGAGCTTGTCAAATGAT+GGG | - | tig0028364:36274-36293 | Msa1437840:intergenic | 35.0% | |
TTGAAGAGCTTGTCAAATGA+TGG | - | tig0028364:36275-36294 | Msa1437840:intergenic | 35.0% | |
TTATAGACACCATAAGCAGT+AGG | - | tig0028364:36306-36325 | Msa1437840:intergenic | 35.0% | |
ACTGCTTATGGTGTCTATAA+AGG | + | tig0028364:36306-36325 | Msa1437840:CDS | 35.0% | |
GTTGAATATGAGGATGGTAA+AGG | - | tig0028364:36435-36454 | Msa1437840:intergenic | 35.0% | |
! | CTTCTAGTTGAATATGAGGA+TGG | - | tig0028364:36441-36460 | Msa1437840:intergenic | 35.0% |
CATCCTCATATTCAACTAGA+AGG | + | tig0028364:36439-36458 | Msa1437840:CDS | 35.0% | |
TGATGACAATAGTGACATCA+GGG | + | tig0028364:36494-36513 | Msa1437840:CDS | 35.0% | |
! | GTTATGTGCCTAATTTTCAG+AGG | + | tig0028364:36604-36623 | Msa1437840:CDS | 35.0% |
CAACGAGTGAAGATAGTTAA+AGG | - | tig0028364:36805-36824 | Msa1437840:intergenic | 35.0% | |
!! | CTCTTTAGGATCAATTAACC+GGG | - | tig0028364:37021-37040 | Msa1437840:intergenic | 35.0% |
!! | CCTCTTTAGGATCAATTAAC+CGG | - | tig0028364:37022-37041 | Msa1437840:intergenic | 35.0% |
TTGATCCTAAAGAGGTTGTT+AGG | + | tig0028364:37027-37046 | Msa1437840:CDS | 35.0% | |
TACGTTCACTAGATGAACAA+AGG | + | tig0028364:37120-37139 | Msa1437840:CDS | 35.0% | |
AAACATGCAATGAATGCAGA+AGG | + | tig0028364:37194-37213 | Msa1437840:CDS | 35.0% | |
ATTCTTGTCATGAACCAAAG+GGG | - | tig0028364:37264-37283 | Msa1437840:intergenic | 35.0% | |
GTATTCTTGTCATGAACCAA+AGG | - | tig0028364:37266-37285 | Msa1437840:intergenic | 35.0% | |
TTTCATTCTGAGTTTGTCAG+TGG | + | tig0028364:37358-37377 | Msa1437840:CDS | 35.0% | |
ATCTACAGAACAAGAAAGAG+CGG | + | tig0028364:37450-37469 | Msa1437840:CDS | 35.0% | |
TACAACATCAGATGGATCAT+AGG | - | tig0028364:37492-37511 | Msa1437840:intergenic | 35.0% | |
TATGATCCATCTGATGTTGT+AGG | + | tig0028364:37491-37510 | Msa1437840:CDS | 35.0% | |
!!! | ACTCTTTTGAAATCGAGTCT+TGG | + | tig0028364:37629-37648 | Msa1437840:CDS | 35.0% |
TAGAGTCAGTCTCAAGATTA+TGG | - | tig0028364:37700-37719 | Msa1437840:intergenic | 35.0% | |
GACTGAATATGCAAGATCTT+TGG | - | tig0028364:37747-37766 | Msa1437840:intergenic | 35.0% | |
TGCATATTCAGTCAATCCAA+TGG | + | tig0028364:37754-37773 | Msa1437840:CDS | 35.0% | |
GCATATTCAGTCAATCCAAT+GGG | + | tig0028364:37755-37774 | Msa1437840:CDS | 35.0% | |
ACTCCTCGTTTAGATGTTAA+CGG | + | tig0028364:37848-37867 | Msa1437840:CDS | 35.0% | |
TGATTAAGTTCCAATGCAGA+AGG | - | tig0028364:37932-37951 | Msa1437840:intergenic | 35.0% | |
AGCTGTAAAGATCAATTCCA+TGG | + | tig0028364:37964-37983 | Msa1437840:CDS | 35.0% | |
TGAAGAATTTGAGGAATGCT+GGG | - | tig0028364:38001-38020 | Msa1437840:intergenic | 35.0% | |
ATGAAGAATTTGAGGAATGC+TGG | - | tig0028364:38002-38021 | Msa1437840:intergenic | 35.0% | |
CTCACCATATGAAGAATTTG+AGG | - | tig0028364:38010-38029 | Msa1437840:intergenic | 35.0% | |
TCTGTAAGAGAGATAAAGAG+TGG | + | tig0028364:38089-38108 | Msa1437840:intron | 35.0% | |
CTGTAAGAGAGATAAAGAGT+GGG | + | tig0028364:38090-38109 | Msa1437840:intron | 35.0% | |
!! | GAGTACTGATAATTGGTGAA+TGG | + | tig0028364:38248-38267 | Msa1437840:intron | 35.0% |
!!! | GTTTCTGTTTTTGTCAAGGA+GGG | - | tig0028364:38378-38397 | Msa1437840:intergenic | 35.0% |
GTGAGCATACAAAAGATACA+AGG | - | tig0028364:38429-38448 | Msa1437840:intergenic | 35.0% | |
!!! | CATTATCAAGGTTTTGGGAA+GGG | - | tig0028364:38451-38470 | Msa1437840:intergenic | 35.0% |
!!! | TCATTATCAAGGTTTTGGGA+AGG | - | tig0028364:38452-38471 | Msa1437840:intergenic | 35.0% |
! | CAGCTCATTATCAAGGTTTT+GGG | - | tig0028364:38456-38475 | Msa1437840:intergenic | 35.0% |
! | ACAGCTCATTATCAAGGTTT+TGG | - | tig0028364:38457-38476 | Msa1437840:intergenic | 35.0% |
!! | AAACCTTGATAATGAGCTGT+AGG | + | tig0028364:38457-38476 | Msa1437840:intron | 35.0% |
TTTCCTACAGCTCATTATCA+AGG | - | tig0028364:38463-38482 | Msa1437840:intergenic | 35.0% | |
!! | GGGACCTAAATCTCTAAAAT+TGG | + | tig0028364:38499-38518 | Msa1437840:intron | 35.0% |
TAGATATGCAATGCTGATGA+CGG | + | tig0028364:38682-38701 | Msa1437840:intron | 35.0% | |
CAGTCTGTTTACTTGAAACA+GGG | - | tig0028364:38711-38730 | Msa1437840:intergenic | 35.0% | |
GCAATAACAGCTAAACAACA+TGG | - | tig0028364:38833-38852 | Msa1437840:intergenic | 35.0% | |
!!! | TTATAGGGTTTTTTACACCG+AGG | + | tig0028364:39004-39023 | Msa1437840:intron | 35.0% |
!!! | TATAGGGTTTTTTACACCGA+GGG | + | tig0028364:39005-39024 | Msa1437840:intron | 35.0% |
GATGACAATACTTTGCTCAA+AGG | + | tig0028364:39163-39182 | Msa1437840:intron | 35.0% | |
! | TGGCTTGTATGATCATCAAT+TGG | + | tig0028364:39200-39219 | Msa1437840:intron | 35.0% |
! | AAAGTCTCCCATGTTCATTT+TGG | - | tig0028364:39251-39270 | Msa1437840:intergenic | 35.0% |
ATTGTTGGCGTAATTCATAG+AGG | + | tig0028364:39413-39432 | Msa1437840:intron | 35.0% | |
AGTCAATGTCAAATTGCGTA+TGG | + | tig0028364:39476-39495 | Msa1437840:intron | 35.0% | |
GTCAATGTCAAATTGCGTAT+GGG | + | tig0028364:39477-39496 | Msa1437840:intron | 35.0% | |
GTTAAAGCCAGACTACATTT+AGG | + | tig0028364:39529-39548 | Msa1437840:intron | 35.0% | |
ATCCTATCCTAAATGTAGTC+TGG | - | tig0028364:39539-39558 | Msa1437840:intergenic | 35.0% | |
GGATAGGATCAAACTTTATC+TGG | + | tig0028364:39550-39569 | Msa1437840:intron | 35.0% | |
AACTTGAGGTTGAGACAAAT+TGG | + | tig0028364:39576-39595 | Msa1437840:intron | 35.0% | |
AATTGTGCATGACCAAGAAA+AGG | + | tig0028364:39633-39652 | Msa1437840:intron | 35.0% | |
CAAGAATCATGGAGATAATG+TGG | + | tig0028364:39656-39675 | Msa1437840:intron | 35.0% | |
ATACCAAACCCATAGTGAAT+AGG | + | tig0028364:39768-39787 | Msa1437840:intron | 35.0% | |
ACATCAACACATTGCTTGAA+AGG | + | tig0028364:39919-39938 | Msa1437840:intron | 35.0% | |
TGAAAGGCAATTCAACAAGA+TGG | + | tig0028364:39935-39954 | Msa1437840:intron | 35.0% | |
CATATAACCAAACCAGTTTC+AGG | - | tig0028364:40009-40028 | Msa1437840:intergenic | 35.0% | |
AAACATGTTTGGCTGCATTT+AGG | + | tig0028364:40141-40160 | Msa1437840:intron | 35.0% | |
ATTCAAGCAGCAGAAAAAGA+TGG | + | tig0028364:40187-40206 | Msa1437840:intron | 35.0% | |
TTCAAGCAGCAGAAAAAGAT+GGG | + | tig0028364:40188-40207 | Msa1437840:intron | 35.0% | |
!!! | TTGTGGGCATCTTTTTTTCT+TGG | + | tig0028364:40273-40292 | Msa1437840:intron | 35.0% |
!!! | TGTGGGCATCTTTTTTTCTT+GGG | + | tig0028364:40274-40293 | Msa1437840:intron | 35.0% |
ACGTTAAGATTGTGACAAAC+AGG | + | tig0028364:40488-40507 | Msa1437840:intron | 35.0% | |
TATTCTCACGTTAAATTGCC+TGG | + | tig0028364:40520-40539 | Msa1437840:intron | 35.0% | |
ATTCTCACGTTAAATTGCCT+GGG | + | tig0028364:40521-40540 | Msa1437840:intron | 35.0% | |
! | ACACACAGATAATTTTGTCG+AGG | + | tig0028364:40568-40587 | Msa1437840:intron | 35.0% |
CTAACATAAGAAACCAATCC+TGG | + | tig0028364:40807-40826 | Msa1437840:intron | 35.0% | |
CATCTACAAATCTGTTGGTA+TGG | - | tig0028364:40853-40872 | Msa1437840:intergenic | 35.0% | |
TATTCTTAGAATCTGGGCTT+GGG | + | tig0028364:41099-41118 | Msa1437840:intron | 35.0% | |
ACTTTCCAAACCAGATTTGT+GGG | - | tig0028364:41136-41155 | Msa1437840:intergenic | 35.0% | |
!! | AAATCTGGTTTGGAAAGTGT+GGG | + | tig0028364:41138-41157 | Msa1437840:intron | 35.0% |
CAAGTATCTCTAGGCAATAT+GGG | + | tig0028364:41182-41201 | Msa1437840:intron | 35.0% | |
GATACTTGTGCTAAATGTGA+AGG | - | tig0028364:41219-41238 | Msa1437840:intergenic | 35.0% | |
TAGGTGACAGCAAGTATATT+TGG | + | tig0028364:41335-41354 | Msa1437840:intron | 35.0% | |
AGTTGAAATGCTCAAAAACC+AGG | + | tig0028364:41486-41505 | Msa1437840:CDS | 35.0% | |
AGATAGGAAGAAAGATACAG+TGG | - | tig0028364:41562-41581 | Msa1437840:intergenic | 35.0% | |
AATCTCAACTGAATTCTCCA+GGG | - | tig0028364:41686-41705 | Msa1437840:intergenic | 35.0% | |
TAGAAAAGACCAACTAGAAC+AGG | - | tig0028364:41768-41787 | Msa1437840:intergenic | 35.0% | |
AACTGAGACTAGGAAAAGAA+AGG | - | tig0028364:41796-41815 | Msa1437840:intergenic | 35.0% | |
! | TTTGAAACCTGTATAAGGGA+TGG | - | tig0028364:41823-41842 | Msa1437840:intergenic | 35.0% |
ACTGAGATAAAACAATGGTC+AGG | - | tig0028364:41861-41880 | Msa1437840:intergenic | 35.0% | |
! | CAAACATTTTACAGGGAATG+AGG | - | tig0028364:41941-41960 | Msa1437840:intergenic | 35.0% |
! | GACAAGTGTTTTCTCATCAT+CGG | - | tig0028364:42047-42066 | Msa1437840:intergenic | 35.0% |
AGCACATTGGTATAGCATAT+GGG | - | tig0028364:42188-42207 | Msa1437840:intergenic | 35.0% | |
TGTTCCTTGCAAAACTCAAA+CGG | - | tig0028364:42295-42314 | Msa1437840:intergenic | 35.0% | |
! | GAGTTTTGCAAGGAACATTA+TGG | + | tig0028364:42298-42317 | Msa1437840:intron | 35.0% |
! | TCGGTTTGTAGACAACAAAA+CGG | - | tig0028364:42333-42352 | Msa1437840:intergenic | 35.0% |
!!! | ATTTTAGGTTCGGTTTGGTT+CGG | - | tig0028364:42352-42371 | Msa1437840:intergenic | 35.0% |
CATAAATTTGAATTGTGCGG+CGG | + | tig0028364:42436-42455 | Msa1437840:intron | 35.0% | |
ATAAATTTGAATTGTGCGGC+GGG | + | tig0028364:42437-42456 | Msa1437840:intron | 35.0% | |
! | AAGGTGTTTACATATAGGGA+CGG | - | tig0028364:42520-42539 | Msa1437840:intergenic | 35.0% |
!! | GGCAAAAGGTGTTTACATAT+AGG | - | tig0028364:42525-42544 | Msa1437840:intergenic | 35.0% |
! | CACCTTTTGCCTCTAATAAA+AGG | + | tig0028364:42534-42553 | Msa1437840:intron | 35.0% |
! | ACCCTTTTATTAGAGGCAAA+AGG | - | tig0028364:42539-42558 | Msa1437840:intergenic | 35.0% |
! | TCTAAGCACCCTTTTATTAG+AGG | - | tig0028364:42546-42565 | Msa1437840:intergenic | 35.0% |
CACCGCTTATTAATTTCTTG+TGG | + | tig0028364:42633-42652 | Msa1437840:intron | 35.0% | |
! | TCTTTGCTAATGGTTCTGTT+CGG | + | tig0028364:42763-42782 | Msa1437840:intron | 35.0% |
CATTTCGGTTCAAAATGGTT+CGG | + | tig0028364:42788-42807 | Msa1437840:intron | 35.0% | |
ACCACTTTAATGGTTCAGTT+TGG | + | tig0028364:42855-42874 | Msa1437840:intron | 35.0% | |
ACCAAACTGAACCATTAAAG+TGG | - | tig0028364:42859-42878 | Msa1437840:intergenic | 35.0% | |
ATGTGGTAGCCAATTAACAT+AGG | - | tig0028364:42990-43009 | Msa1437840:intergenic | 35.0% | |
CCAATTTAAGGATCATTCAC+TGG | - | tig0028364:43061-43080 | Msa1437840:intergenic | 35.0% | |
CCAGTGAATGATCCTTAAAT+TGG | + | tig0028364:43058-43077 | Msa1437840:intron | 35.0% | |
GAAGCTTCAAGTCCAATTTA+AGG | - | tig0028364:43073-43092 | Msa1437840:intergenic | 35.0% | |
GAAAAAGACTTAATCGAAGG+AGG | - | tig0028364:43120-43139 | Msa1437840:intergenic | 35.0% | |
ATGTTTATGTATTCTAGGCC+AGG | + | tig0028364:43186-43205 | Msa1437840:intron | 35.0% | |
ATTATCCTTTCTTCAGCTTG+TGG | + | tig0028364:43362-43381 | Msa1437840:intron | 35.0% | |
TTATCCTTTCTTCAGCTTGT+GGG | + | tig0028364:43363-43382 | Msa1437840:intron | 35.0% | |
AAAAGAGAAGGTAGAAACGA+GGG | - | tig0028364:43423-43442 | Msa1437840:intergenic | 35.0% | |
AAAAAGAGAAGGTAGAAACG+AGG | - | tig0028364:43424-43443 | Msa1437840:intergenic | 35.0% | |
CCAAAAGCTTCAAAAAGAGA+AGG | - | tig0028364:43435-43454 | Msa1437840:intergenic | 35.0% | |
!!! | CCTTCTCTTTTTGAAGCTTT+TGG | + | tig0028364:43432-43451 | Msa1437840:CDS | 35.0% |
! | GGTCTCAAACATCTGATTTT+TGG | - | tig0028364:43587-43606 | Msa1437840:intergenic | 35.0% |
GGTACCTACTTAAACGTATT+TGG | + | tig0028364:43620-43639 | Msa1437840:intron | 35.0% | |
GGTACCAAATACGTTTAAGT+AGG | - | tig0028364:43627-43646 | Msa1437840:intergenic | 35.0% | |
!!! | CTATCTTGTTTTGTGTGAGT+AGG | - | tig0028364:43878-43897 | Msa1437840:intergenic | 35.0% |
CTACTCACACAAAACAAGAT+AGG | + | tig0028364:43876-43895 | Msa1437840:intron | 35.0% | |
AGCACATATTGTCGCAAATA+TGG | + | tig0028364:43936-43955 | Msa1437840:intron | 35.0% | |
! | CAAATTGACTTTGTATTGGG+TGG | - | tig0028364:44781-44800 | Msa1437840:intergenic | 35.0% |
AAAATTGTTGCAAGGATGTG+GGG | - | tig0028364:44953-44972 | Msa1437840:intergenic | 35.0% | |
TAATCATAGGTCATGACATG+GGG | - | tig0028364:45049-45068 | Msa1437840:intergenic | 35.0% | |
CAAGTAATGATGACTTACCA+TGG | + | tig0028364:45105-45124 | Msa1437840:intron | 35.0% | |
TCCCTTCCATTCTTAAATTG+AGG | + | tig0028364:45330-45349 | Msa1437840:intron | 35.0% | |
CCCTCAATTTAAGAATGGAA+GGG | - | tig0028364:45334-45353 | Msa1437840:intergenic | 35.0% | |
CCCTTCCATTCTTAAATTGA+GGG | + | tig0028364:45331-45350 | Msa1437840:intron | 35.0% | |
TCCCTCAATTTAAGAATGGA+AGG | - | tig0028364:45335-45354 | Msa1437840:intergenic | 35.0% | |
! | ATTTTGTTCAAATGAGGGGA+TGG | - | tig0028364:45368-45387 | Msa1437840:intergenic | 35.0% |
TCCTTTGTTCTCTTGATATC+TGG | + | tig0028364:45633-45652 | Msa1437840:intron | 35.0% | |
ACCAGATATCAAGAGAACAA+AGG | - | tig0028364:45637-45656 | Msa1437840:intergenic | 35.0% | |
ATGAACCTGCTAATCATGAA+CGG | - | tig0028364:45850-45869 | Msa1437840:intergenic | 35.0% | |
AAGGTGAAGAAGTAAAGAAC+TGG | - | tig0028364:45963-45982 | Msa1437840:intergenic | 35.0% | |
ACAAACATTGACAGGCAAAA+AGG | - | tig0028364:46015-46034 | Msa1437840:intergenic | 35.0% | |
! | TTTTGCCTGTCAATGTTTGT+TGG | + | tig0028364:46015-46034 | Msa1437840:three_prime_UTR | 35.0% |
TTTGCCTGTCAATGTTTGTT+GGG | + | tig0028364:46016-46035 | Msa1437840:three_prime_UTR | 35.0% | |
GGGTAGATTGACAGAGAAAA+AGG | - | tig0028364:28224-28243 | None:intergenic | 40.0% | |
GTGAATTGAATTTGGAAGCG+CGG | - | tig0028364:28317-28336 | None:intergenic | 40.0% | |
! | AGATCTGAAGCAGATCCAAA+TGG | + | tig0028364:28378-28397 | Msa1437840:exon | 40.0% |
CATCCTTTCCTTTGTGTCTT+TGG | - | tig0028364:28428-28447 | Msa1437840:intergenic | 40.0% | |
CAAAGACACAAAGGAAAGGA+TGG | + | tig0028364:28426-28445 | Msa1437840:CDS | 40.0% | |
! | TTCTTGCATCGATCTCTTGA+AGG | + | tig0028364:28528-28547 | Msa1437840:CDS | 40.0% |
AACAATTTCCGTGTCTCTCA+AGG | + | tig0028364:28553-28572 | Msa1437840:CDS | 40.0% | |
TGTTTGTGCTCTATAGCTTG+CGG | - | tig0028364:29105-29124 | Msa1437840:intergenic | 40.0% | |
CTATCACCTAGTGAAACCTA+TGG | + | tig0028364:29346-29365 | Msa1437840:intron | 40.0% | |
ATAATAGAGCGCATAGCCAT+AGG | - | tig0028364:29365-29384 | Msa1437840:intergenic | 40.0% | |
! | GGTCTTATGGTATTGTATGC+AGG | - | tig0028364:29582-29601 | Msa1437840:intergenic | 40.0% |
AATACCATAAGACCCTGTAC+TGG | + | tig0028364:29588-29607 | Msa1437840:intron | 40.0% | |
! | CATAGTTTGTAGACCAGTAC+AGG | - | tig0028364:29604-29623 | Msa1437840:intergenic | 40.0% |
!!! | GCTGGATTTTTTGCTTTCCT+GGG | - | tig0028364:29691-29710 | Msa1437840:intergenic | 40.0% |
ACTACAATGTTTACTTCGGC+TGG | - | tig0028364:29709-29728 | Msa1437840:intergenic | 40.0% | |
AGCTATAGAGTGACTGTTTC+TGG | + | tig0028364:29790-29809 | Msa1437840:intron | 40.0% | |
! | GCTATAGAGTGACTGTTTCT+GGG | + | tig0028364:29791-29810 | Msa1437840:intron | 40.0% |
GGTTAACAAGTTAAGCTGGA+AGG | + | tig0028364:29838-29857 | Msa1437840:intron | 40.0% | |
GAAACACCCAACCTACAATA+AGG | - | tig0028364:30001-30020 | Msa1437840:intergenic | 40.0% | |
GTAAAGTCAATACAGGAGGA+AGG | - | tig0028364:30285-30304 | Msa1437840:intergenic | 40.0% | |
GTGACCCAAATCTTTCTGTT+AGG | + | tig0028364:30410-30429 | Msa1437840:CDS | 40.0% | |
GCTTCCCTAACAGAAAGATT+TGG | - | tig0028364:30418-30437 | Msa1437840:intergenic | 40.0% | |
!! | AGCAGCTATTTTGTGCATTG+AGG | + | tig0028364:30435-30454 | Msa1437840:CDS | 40.0% |
CAGGAAATGTATACACAAGC+CGG | + | tig0028364:31138-31157 | Msa1437840:intron | 40.0% | |
TTCATCACGAAATTGAGGTC+CGG | - | tig0028364:31160-31179 | Msa1437840:intergenic | 40.0% | |
TCACGGATATGGATCTTTGA+AGG | + | tig0028364:31290-31309 | Msa1437840:intron | 40.0% | |
GATATTAATGCCAGGCTAGA+AGG | + | tig0028364:31391-31410 | Msa1437840:CDS | 40.0% | |
TCTTCAGATGGTATTCCAAG+TGG | + | tig0028364:31433-31452 | Msa1437840:CDS | 40.0% | |
TCCAAGTGGTTATATTACCG+GGG | + | tig0028364:31447-31466 | Msa1437840:CDS | 40.0% | |
!! | CTTGAAGAACTTTTGGCCTT+TGG | - | tig0028364:31511-31530 | Msa1437840:intergenic | 40.0% |
CAAAGGCCAAAAGTTCTTCA+AGG | + | tig0028364:31509-31528 | Msa1437840:CDS | 40.0% | |
! | GCATAACTTCCCTCTTTTAC+AGG | + | tig0028364:31642-31661 | Msa1437840:intron | 40.0% |
GTTTAATAGTGCGGTGAATG+TGG | + | tig0028364:31741-31760 | Msa1437840:intron | 40.0% | |
! | TAACTTGTGGAGTTACCCAA+GGG | - | tig0028364:31955-31974 | Msa1437840:intergenic | 40.0% |
! | ATAACTTGTGGAGTTACCCA+AGG | - | tig0028364:31956-31975 | Msa1437840:intergenic | 40.0% |
TACGATGTAGGCATAACTTG+TGG | - | tig0028364:31968-31987 | Msa1437840:intergenic | 40.0% | |
CTAAAAGTAGGAAGATCCCA+AGG | - | tig0028364:32026-32045 | Msa1437840:intergenic | 40.0% | |
TTATCCTTCCCTTCTTAGCT+GGG | + | tig0028364:32242-32261 | Msa1437840:intron | 40.0% | |
ATCAACTTCCCAGCTAAGAA+GGG | - | tig0028364:32253-32272 | Msa1437840:intergenic | 40.0% | |
ATTAAATCACGAGCAGCAGA+AGG | + | tig0028364:32311-32330 | Msa1437840:intron | 40.0% | |
TTCCCTGACTAACTCCTTAT+CGG | - | tig0028364:32378-32397 | Msa1437840:intergenic | 40.0% | |
!! | ATTGAAGGTCTTGTTCTAGG+AGG | + | tig0028364:32467-32486 | Msa1437840:CDS | 40.0% |
CCTCTTAAGATCCTCAAAAC+GGG | - | tig0028364:32579-32598 | Msa1437840:intergenic | 40.0% | |
CCCTCTTAAGATCCTCAAAA+CGG | - | tig0028364:32580-32599 | Msa1437840:intergenic | 40.0% | |
!!! | CCGTTTTGAGGATCTTAAGA+GGG | + | tig0028364:32577-32596 | Msa1437840:intron | 40.0% |
AGTAAATCCAAACAAGCCCA+TGG | - | tig0028364:32772-32791 | Msa1437840:intergenic | 40.0% | |
! | ATAAACACTTGGACCCGTTT+TGG | + | tig0028364:32813-32832 | Msa1437840:intron | 40.0% |
TCTCTCAAGCAGTCTAACAA+GGG | - | tig0028364:33086-33105 | Msa1437840:intergenic | 40.0% | |
AAGCTAAATTGGAGAGCTTG+TGG | - | tig0028364:33159-33178 | Msa1437840:intergenic | 40.0% | |
CTAATACGCTCCTCCTAAAA+TGG | - | tig0028364:33367-33386 | Msa1437840:intergenic | 40.0% | |
!! | CATTTTAGGAGGAGCGTATT+AGG | + | tig0028364:33365-33384 | Msa1437840:intron | 40.0% |
GGATCCCAGTTCTATAAAAC+TGG | + | tig0028364:33386-33405 | Msa1437840:intron | 40.0% | |
TCCCAGTTCTATAAAACTGG+GGG | + | tig0028364:33389-33408 | Msa1437840:intron | 40.0% | |
!! | TCCCCCAGTTTTATAGAACT+GGG | - | tig0028364:33393-33412 | Msa1437840:intergenic | 40.0% |
!! | ATCCCCCAGTTTTATAGAAC+TGG | - | tig0028364:33394-33413 | Msa1437840:intergenic | 40.0% |
TTCTATAAAACTGGGGGATG+TGG | + | tig0028364:33395-33414 | Msa1437840:intron | 40.0% | |
TCTATAAAACTGGGGGATGT+GGG | + | tig0028364:33396-33415 | Msa1437840:intron | 40.0% | |
! | GCTGATTATCCATGTTTTCG+TGG | + | tig0028364:33692-33711 | Msa1437840:CDS | 40.0% |
AAGATCTAGCATCGTAAAGC+AGG | + | tig0028364:33763-33782 | Msa1437840:CDS | 40.0% | |
CTCACCTATGACAAAGTCAA+TGG | - | tig0028364:34006-34025 | Msa1437840:intergenic | 40.0% | |
!! | CATTGACTTTGTCATAGGTG+AGG | + | tig0028364:34004-34023 | Msa1437840:intron | 40.0% |
CATGACAGTCCAAAGATAAC+TGG | - | tig0028364:34175-34194 | Msa1437840:intergenic | 40.0% | |
!! | TAATCAGGTCCTTTTCAAGC+TGG | + | tig0028364:34232-34251 | Msa1437840:intron | 40.0% |
GTAAACGACGAAGGTGAAAA+TGG | - | tig0028364:34365-34384 | Msa1437840:intergenic | 40.0% | |
TTAGCACAATCAGCTATACG+GGG | - | tig0028364:34429-34448 | Msa1437840:intergenic | 40.0% | |
TACAACTCCATTTGCACTGT+AGG | + | tig0028364:34527-34546 | Msa1437840:intron | 40.0% | |
! | GTGTTGTGAGTATGCTCTTT+TGG | + | tig0028364:34549-34568 | Msa1437840:CDS | 40.0% |
! | CTCTTTTGGTCCTAGAACAT+TGG | + | tig0028364:34563-34582 | Msa1437840:CDS | 40.0% |
TGCACCAGAAATACATCGTT+CGG | + | tig0028364:34591-34610 | Msa1437840:CDS | 40.0% | |
AATGAGCGAGGTAGAGTTAT+AGG | + | tig0028364:34657-34676 | Msa1437840:intron | 40.0% | |
TGTGTTGCATTTGCAGTTGT+GGG | + | tig0028364:34805-34824 | Msa1437840:intron | 40.0% | |
ATATTGTCGGTGTACGGTAA+AGG | + | tig0028364:34979-34998 | Msa1437840:intron | 40.0% | |
! | TTGAACAGACCCCTTTTCTT+TGG | - | tig0028364:35070-35089 | Msa1437840:intergenic | 40.0% |
TTTCTTAAGGGACATGATGC+AGG | - | tig0028364:35230-35249 | Msa1437840:intergenic | 40.0% | |
! | CTCTGACCCTGATTTTCTTA+AGG | - | tig0028364:35243-35262 | Msa1437840:intergenic | 40.0% |
TATAGGTACGATCTACTGCA+AGG | + | tig0028364:35526-35545 | Msa1437840:intron | 40.0% | |
CAGGGTCAAAGGATGAAAAT+AGG | - | tig0028364:35599-35618 | Msa1437840:intergenic | 40.0% | |
ATTGCAGATGTTCCATAACC+AGG | - | tig0028364:35826-35845 | Msa1437840:intergenic | 40.0% | |
! | GAAGTTCAAGTTTATCGTCG+GGG | + | tig0028364:35860-35879 | Msa1437840:CDS | 40.0% |
! | TAAGGGTACAGAACGTAGTT+TGG | + | tig0028364:35930-35949 | Msa1437840:CDS | 40.0% |
! | GCTATTGAAAGCATGCTTAG+AGG | + | tig0028364:35988-36007 | Msa1437840:CDS | 40.0% |
!! | AGCATAATGGATCATCTCTC+CGG | + | tig0028364:36028-36047 | Msa1437840:CDS | 40.0% |
! | CTAGATCCAAACTTGATGAC+CGG | - | tig0028364:36050-36069 | Msa1437840:intergenic | 40.0% |
!! | TATTTCATGGTTGGTGGTAG+TGG | + | tig0028364:36132-36151 | Msa1437840:intron | 40.0% |
AAAGGTAGTAACCGAAATGG+TGG | + | tig0028364:36324-36343 | Msa1437840:CDS | 40.0% | |
! | TGATGACTTGGCAGAATCTT+TGG | - | tig0028364:36388-36407 | Msa1437840:intergenic | 40.0% |
! | AGCCCTTCTAGTTGAATATG+AGG | - | tig0028364:36445-36464 | Msa1437840:intergenic | 40.0% |
CTGATGACAATAGTGACATC+AGG | + | tig0028364:36493-36512 | Msa1437840:CDS | 40.0% | |
GATACTGCTTATCAGTGTTG+TGG | - | tig0028364:36539-36558 | Msa1437840:intergenic | 40.0% | |
CAACACTGATAAGCAGTATC+TGG | + | tig0028364:36539-36558 | Msa1437840:CDS | 40.0% | |
! | ACTAGTGGCCTCTGAAAATT+AGG | - | tig0028364:36615-36634 | Msa1437840:intergenic | 40.0% |
GTTGCATTCTTTCTCACTAG+TGG | - | tig0028364:36630-36649 | Msa1437840:intergenic | 40.0% | |
CTAGTGAGAAAGAATGCAAC+TGG | + | tig0028364:36630-36649 | Msa1437840:CDS | 40.0% | |
GATGATAACCAGCTATCTCT+TGG | + | tig0028364:36684-36703 | Msa1437840:CDS | 40.0% | |
ACATTTCTCCAAGAGATAGC+TGG | - | tig0028364:36695-36714 | Msa1437840:intergenic | 40.0% | |
AAAGCTTCATGAAGAGATGC+TGG | - | tig0028364:36735-36754 | Msa1437840:intergenic | 40.0% | |
!! | CTTCATGAAGCTTTGAGTGA+AGG | + | tig0028364:36741-36760 | Msa1437840:CDS | 40.0% |
!! | AAGCTTTGAGTGAAGGACTT+AGG | + | tig0028364:36748-36767 | Msa1437840:CDS | 40.0% |
!! | ACAACTTCTAGAGTTCCCTT+TGG | - | tig0028364:36840-36859 | Msa1437840:intergenic | 40.0% |
!!! | GAAGTTGTTTTTCCAGCACT+TGG | + | tig0028364:36881-36900 | Msa1437840:CDS | 40.0% |
!! | AAAGCCTTTTGAGGGATACA+TGG | + | tig0028364:36971-36990 | Msa1437840:CDS | 40.0% |
CTTTCCATGTATCCCTCAAA+AGG | - | tig0028364:36978-36997 | Msa1437840:intergenic | 40.0% | |
! | TATTACCACACGTCTTTTCC+CGG | + | tig0028364:37000-37019 | Msa1437840:CDS | 40.0% |
CCGGTTAATTGATCCTAAAG+AGG | + | tig0028364:37019-37038 | Msa1437840:CDS | 40.0% | |
CAGCCATGTTCAACAACATT+GGG | + | tig0028364:37050-37069 | Msa1437840:CDS | 40.0% | |
ACTCCCAATGTTGTTGAACA+TGG | - | tig0028364:37056-37075 | Msa1437840:intergenic | 40.0% | |
AGATGAACAAAGGTCTCCAA+AGG | + | tig0028364:37130-37149 | Msa1437840:CDS | 40.0% | |
AAGGTCTCCAAAGGCTAAAT+TGG | + | tig0028364:37139-37158 | Msa1437840:CDS | 40.0% | |
AGATGGATCATAGGAAGACT+TGG | - | tig0028364:37483-37502 | Msa1437840:intergenic | 40.0% | |
TAGGAACGTCATCTGAAGAT+GGG | + | tig0028364:37510-37529 | Msa1437840:CDS | 40.0% | |
TCATCTGAAGATGGGTATGT+TGG | + | tig0028364:37518-37537 | Msa1437840:CDS | 40.0% | |
!! | ATGGGTATGTTGGTTTCTCT+AGG | + | tig0028364:37528-37547 | Msa1437840:CDS | 40.0% |
TCTAGGAAAGCTCATTACCT+TGG | + | tig0028364:37545-37564 | Msa1437840:CDS | 40.0% | |
!!! | AGATCTTTGGGTTTTGAACC+AGG | - | tig0028364:37734-37753 | Msa1437840:intergenic | 40.0% |
!! | GAGCCAAAATTTTGACCCAT+TGG | - | tig0028364:37773-37792 | Msa1437840:intergenic | 40.0% |
GACAGTAGCATGAATTTCGA+GGG | + | tig0028364:37818-37837 | Msa1437840:CDS | 40.0% | |
AGACCGTTAACATCTAAACG+AGG | - | tig0028364:37854-37873 | Msa1437840:intergenic | 40.0% | |
! | GAGCGTTTAAATGTTGGTGA+AGG | + | tig0028364:37884-37903 | Msa1437840:CDS | 40.0% |
CAAAGAACTTCCTTCTGCAT+TGG | + | tig0028364:37919-37938 | Msa1437840:CDS | 40.0% | |
TCTTTACAGCTTCAGTTGAG+TGG | - | tig0028364:37955-37974 | Msa1437840:intergenic | 40.0% | |
GGCTTATCTTCAATTCCTCA+TGG | + | tig0028364:38269-38288 | Msa1437840:intron | 40.0% | |
!! | CTAGTTAGAGGGGTTAGTTA+CGG | - | tig0028364:38334-38353 | Msa1437840:intergenic | 40.0% |
!!! | GGTTTCTGTTTTTGTCAAGG+AGG | - | tig0028364:38379-38398 | Msa1437840:intergenic | 40.0% |
!!! | AGGGGTTTCTGTTTTTGTCA+AGG | - | tig0028364:38382-38401 | Msa1437840:intergenic | 40.0% |
ACAGAAACCCCTAAAGTCAT+TGG | + | tig0028364:38390-38409 | Msa1437840:intron | 40.0% | |
AGCTGTAGGAAAATCGTCTA+CGG | + | tig0028364:38471-38490 | Msa1437840:intron | 40.0% | |
GCAGTCTGTTTACTTGAAAC+AGG | - | tig0028364:38712-38731 | Msa1437840:intergenic | 40.0% | |
CAACAAATGACCAGTCTGTT+TGG | + | tig0028364:38758-38777 | Msa1437840:CDS | 40.0% | |
CAAAGGACAACTCAACAAGA+TGG | + | tig0028364:39180-39199 | Msa1437840:intron | 40.0% | |
TAACTCTCCCAGATTCAATC+TGG | - | tig0028364:39513-39532 | Msa1437840:intergenic | 40.0% | |
! | AGCCAGACTACATTTAGGAT+AGG | + | tig0028364:39534-39553 | Msa1437840:intron | 40.0% |
! | ACTTTATCTGGGACAACTTG+AGG | + | tig0028364:39562-39581 | Msa1437840:intron | 40.0% |
! | CCATGATTCTTGCCTTTTCT+TGG | - | tig0028364:39648-39667 | Msa1437840:intergenic | 40.0% |
CCAAGAAAAGGCAAGAATCA+TGG | + | tig0028364:39645-39664 | Msa1437840:intron | 40.0% | |
!! | TGAAGTTGGTAGCAAGATAG+TGG | + | tig0028364:39706-39725 | Msa1437840:intron | 40.0% |
TCACCTATTCACTATGGGTT+TGG | - | tig0028364:39774-39793 | Msa1437840:intergenic | 40.0% | |
AAACCCATAGTGAATAGGTG+AGG | + | tig0028364:39773-39792 | Msa1437840:intron | 40.0% | |
GTTTACCCAGTCATGATTTG+TGG | - | tig0028364:39870-39889 | Msa1437840:intergenic | 40.0% | |
ATGACTGGGTAAACAACTCA+AGG | + | tig0028364:39876-39895 | Msa1437840:intron | 40.0% | |
GGTAAACAACTCAAGGATGT+AGG | + | tig0028364:39883-39902 | Msa1437840:intron | 40.0% | |
ATCCAAACAGCTCTTCAGAT+TGG | - | tig0028364:39973-39992 | Msa1437840:intergenic | 40.0% | |
GAAGAGCTGTTTGGATTCTT+TGG | + | tig0028364:39977-39996 | Msa1437840:intron | 40.0% | |
! | TAACCAAACCAGTTTCAGGT+CGG | - | tig0028364:40005-40024 | Msa1437840:intergenic | 40.0% |
! | ATTTCTTTGGCGGGATGTTT+TGG | + | tig0028364:40094-40113 | Msa1437840:intron | 40.0% |
! | TTGGCTGCATTTAGGATTGA+TGG | + | tig0028364:40149-40168 | Msa1437840:intron | 40.0% |
! | TGGCTGCATTTAGGATTGAT+GGG | + | tig0028364:40150-40169 | Msa1437840:intron | 40.0% |
AAGAGAAGATACCCATCCAT+AGG | + | tig0028364:40232-40251 | Msa1437840:intron | 40.0% | |
AGTATCTTTCATCCCAGGAT+TGG | - | tig0028364:40823-40842 | Msa1437840:intergenic | 40.0% | |
ATCCTGGGATGAAAGATACT+TGG | + | tig0028364:40823-40842 | Msa1437840:intron | 40.0% | |
TTCCAAGTATCTTTCATCCC+AGG | - | tig0028364:40828-40847 | Msa1437840:intergenic | 40.0% | |
! | TTAGCACGGTGTGTTTTCAT+AGG | - | tig0028364:40985-41004 | Msa1437840:intergenic | 40.0% |
GTATTCTTAGAATCTGGGCT+TGG | + | tig0028364:41098-41117 | Msa1437840:intron | 40.0% | |
ATTCTTAGAATCTGGGCTTG+GGG | + | tig0028364:41100-41119 | Msa1437840:intron | 40.0% | |
TCTAACTCAACCCACAAATC+TGG | + | tig0028364:41123-41142 | Msa1437840:intron | 40.0% | |
CACTTTCCAAACCAGATTTG+TGG | - | tig0028364:41137-41156 | Msa1437840:intergenic | 40.0% | |
!! | CAAATCTGGTTTGGAAAGTG+TGG | + | tig0028364:41137-41156 | Msa1437840:intron | 40.0% |
!! | AGAGATACTTGGTGCTTATG+AGG | - | tig0028364:41173-41192 | Msa1437840:intergenic | 40.0% |
CATAAGCACCAAGTATCTCT+AGG | + | tig0028364:41173-41192 | Msa1437840:intron | 40.0% | |
CCATATTGCCTAGAGATACT+TGG | - | tig0028364:41184-41203 | Msa1437840:intergenic | 40.0% | |
CCAAGTATCTCTAGGCAATA+TGG | + | tig0028364:41181-41200 | Msa1437840:intron | 40.0% | |
CTTAAAACAGAGTACGAACC+TGG | - | tig0028364:41507-41526 | Msa1437840:intergenic | 40.0% | |
AGGAAGAAAGATACAGTGGA+AGG | - | tig0028364:41558-41577 | Msa1437840:intergenic | 40.0% | |
TTGTTAACAGAAAGATGCCC+TGG | + | tig0028364:41666-41685 | Msa1437840:intron | 40.0% | |
CAATCTCAACTGAATTCTCC+AGG | - | tig0028364:41687-41706 | Msa1437840:intergenic | 40.0% | |
CAACTAGAACAGGACAACTT+TGG | - | tig0028364:41758-41777 | Msa1437840:intergenic | 40.0% | |
CAAAGTTGTCCTGTTCTAGT+TGG | + | tig0028364:41756-41775 | Msa1437840:intron | 40.0% | |
GTTTCTTCCATCCCTTATAC+AGG | + | tig0028364:41813-41832 | Msa1437840:intron | 40.0% | |
CGTACACTCAAACATCTGAA+TGG | - | tig0028364:41889-41908 | Msa1437840:intergenic | 40.0% | |
CAGCACATTGGTATAGCATA+TGG | - | tig0028364:42189-42208 | Msa1437840:intergenic | 40.0% | |
CATATGCTATACCAATGTGC+TGG | + | tig0028364:42187-42206 | Msa1437840:intron | 40.0% | |
CTTGCAAAACTCAAACGGTT+CGG | - | tig0028364:42290-42309 | Msa1437840:intergenic | 40.0% | |
TGTTTACATATAGGGACGGA+GGG | - | tig0028364:42516-42535 | Msa1437840:intergenic | 40.0% | |
! | TGGTTCTGTTCGGTTCATTT+CGG | + | tig0028364:42773-42792 | Msa1437840:intron | 40.0% |
CGGTTCATTTCGGTTCAAAA+TGG | + | tig0028364:42783-42802 | Msa1437840:intron | 40.0% | |
!! | GGTTCAAAATGGTTCGGTTA+TGG | + | tig0028364:42794-42813 | Msa1437840:intron | 40.0% |
TGGTTCGCAAACCACTTTAA+TGG | + | tig0028364:42845-42864 | Msa1437840:intron | 40.0% | |
TTTACAAGTATCACCAGCCA+GGG | - | tig0028364:42925-42944 | Msa1437840:intergenic | 40.0% | |
! | TTTTACAAGTATCACCAGCC+AGG | - | tig0028364:42926-42945 | Msa1437840:intergenic | 40.0% |
TGTCGTATGAAGTTAAGTGC+TGG | + | tig0028364:43782-43801 | Msa1437840:intron | 40.0% | |
ATGCATACAAGGGATGAAGT+TGG | + | tig0028364:43910-43929 | Msa1437840:intron | 40.0% | |
TGCATACAAGGGATGAAGTT+GGG | + | tig0028364:43911-43930 | Msa1437840:intron | 40.0% | |
ATGGTTCTTAAATGAGGCAC+TGG | + | tig0028364:44023-44042 | Msa1437840:intron | 40.0% | |
AAAGGCTAGACTGTATTGGA+AGG | - | tig0028364:44060-44079 | Msa1437840:intergenic | 40.0% | |
TCATGACATGGGGGAAAAAT+CGG | - | tig0028364:45039-45058 | Msa1437840:intergenic | 40.0% | |
AATCATAGGTCATGACATGG+GGG | - | tig0028364:45048-45067 | Msa1437840:intergenic | 40.0% | |
!!! | AACTCCTTGTATTTTGGTGC+TGG | + | tig0028364:45424-45443 | Msa1437840:intron | 40.0% |
ATCCACGAGACAGAAAACAA+CGG | - | tig0028364:45703-45722 | Msa1437840:intergenic | 40.0% | |
GCATTCTTGCCATATTTGCA+AGG | + | tig0028364:45744-45763 | Msa1437840:CDS | 40.0% | |
CTGTTAAGGCCTTGCAAATA+TGG | - | tig0028364:45756-45775 | Msa1437840:intergenic | 40.0% | |
TGATACCGTTCATGATTAGC+AGG | + | tig0028364:45842-45861 | Msa1437840:exon | 40.0% | |
CATTGACAGGCAAAAAGGAA+AGG | - | tig0028364:46010-46029 | Msa1437840:intergenic | 40.0% | |
AACACCCAACAAACATTGAC+AGG | - | tig0028364:46023-46042 | Msa1437840:intergenic | 40.0% | |
! | GGTTTTCAAAAAAGCCGCAT+TGG | + | tig0028364:46140-46159 | Msa1437840:three_prime_UTR | 40.0% |
GAGAAAGAGAGAGTGAGAGA+GGG | - | tig0028364:28244-28263 | None:intergenic | 45.0% | |
AGAGAAAGAGAGAGTGAGAG+AGG | - | tig0028364:28245-28264 | None:intergenic | 45.0% | |
! | TCTGAAGCAGATCCAAATGG+AGG | + | tig0028364:28381-28400 | Msa1437840:exon | 45.0% |
! | GTGAAGTTTGAAATGCTCGC+CGG | - | tig0028364:28614-28633 | Msa1437840:intergenic | 45.0% |
ACGACTACTTCTAACGCTGA+TGG | + | tig0028364:28705-28724 | Msa1437840:CDS | 45.0% | |
ACTACTTCTAACGCTGATGG+AGG | + | tig0028364:28708-28727 | Msa1437840:CDS | 45.0% | |
GAAAGACGCAAACACGATTC+TGG | - | tig0028364:28993-29012 | Msa1437840:intergenic | 45.0% | |
AATTACCAGAGTCGACGTGT+CGG | - | tig0028364:29141-29160 | Msa1437840:intergenic | 45.0% | |
GTTGAAAGGAACCACATGTG+TGG | + | tig0028364:29179-29198 | Msa1437840:intron | 45.0% | |
! | ACGCCTTCTATCAGAAGTGT+AGG | + | tig0028364:29225-29244 | Msa1437840:intron | 45.0% |
GCACCTACACTTCTGATAGA+AGG | - | tig0028364:29231-29250 | Msa1437840:intergenic | 45.0% | |
GCATAGCCATAGGTTTCACT+AGG | - | tig0028364:29355-29374 | Msa1437840:intergenic | 45.0% | |
! | TAACACCTGTGCAAAGCACT+CGG | + | tig0028364:29404-29423 | Msa1437840:intron | 45.0% |
TAGACCAGTACAGGGTCTTA+TGG | - | tig0028364:29595-29614 | Msa1437840:intergenic | 45.0% | |
!!! | GGCTGGATTTTTTGCTTTCC+TGG | - | tig0028364:29692-29711 | Msa1437840:intergenic | 45.0% |
ACGAAGTTTGACATGGCCAA+TGG | + | tig0028364:29946-29965 | Msa1437840:intron | 45.0% | |
CGAAGTTTGACATGGCCAAT+GGG | + | tig0028364:29947-29966 | Msa1437840:intron | 45.0% | |
TGTTGGCAAGAGACACAGAA+TGG | - | tig0028364:30034-30053 | Msa1437840:intergenic | 45.0% | |
CTACCGAACTTCCACTTCAA+CGG | + | tig0028364:30254-30273 | Msa1437840:CDS | 45.0% | |
TACCGAACTTCCACTTCAAC+GGG | + | tig0028364:30255-30274 | Msa1437840:CDS | 45.0% | |
AAGCAGCACCCTTCTTTGTA+CGG | + | tig0028364:30316-30335 | Msa1437840:intron | 45.0% | |
AGTGGGTATAATGTAGGACG+TGG | + | tig0028364:30734-30753 | Msa1437840:intron | 45.0% | |
CCATGAAATTCACAGCCAAC+AGG | - | tig0028364:30852-30871 | Msa1437840:intergenic | 45.0% | |
! | CCTGTTGGCTGTGAATTTCA+TGG | + | tig0028364:30849-30868 | Msa1437840:intron | 45.0% |
! | CCATCTGAAGAGCGAACTTT+TGG | - | tig0028364:31424-31443 | Msa1437840:intergenic | 45.0% |
CCAAAAGTTCGCTCTTCAGA+TGG | + | tig0028364:31421-31440 | Msa1437840:CDS | 45.0% | |
TCCCCGGTAATATAACCACT+TGG | - | tig0028364:31451-31470 | Msa1437840:intergenic | 45.0% | |
CGCCAAGAAAAGTAGTCCAA+AGG | + | tig0028364:31492-31511 | Msa1437840:CDS | 45.0% | |
!! | GGCCTTTGGACTACTTTTCT+TGG | - | tig0028364:31497-31516 | Msa1437840:intergenic | 45.0% |
CTTATCCTTCCCTTCTTAGC+TGG | + | tig0028364:32241-32260 | Msa1437840:intron | 45.0% | |
CATCAACTTCCCAGCTAAGA+AGG | - | tig0028364:32254-32273 | Msa1437840:intergenic | 45.0% | |
ACTCCGATAAGGAGTTAGTC+AGG | + | tig0028364:32372-32391 | Msa1437840:CDS | 45.0% | |
CTCCGATAAGGAGTTAGTCA+GGG | + | tig0028364:32373-32392 | Msa1437840:CDS | 45.0% | |
TCCTTGTGCCTGAAAAAGAC+TGG | + | tig0028364:32417-32436 | Msa1437840:CDS | 45.0% | |
!!! | ACCAGTCTTTTTCAGGCACA+AGG | - | tig0028364:32421-32440 | Msa1437840:intergenic | 45.0% |
CTGCATAGCAGCAATACGAA+CGG | - | tig0028364:32444-32463 | Msa1437840:intergenic | 45.0% | |
GCTGCTATGCAGAGAATTGA+AGG | + | tig0028364:32452-32471 | Msa1437840:CDS | 45.0% | |
!! | AAGGTCTTGTTCTAGGAGGT+TGG | + | tig0028364:32471-32490 | Msa1437840:intron | 45.0% |
! | AAGAACCTGTACCCGTTTTG+AGG | + | tig0028364:32565-32584 | Msa1437840:intron | 45.0% |
AAGATCCTCAAAACGGGTAC+AGG | - | tig0028364:32573-32592 | Msa1437840:intergenic | 45.0% | |
!!! | CCCGTTTTGAGGATCTTAAG+AGG | + | tig0028364:32576-32595 | Msa1437840:intron | 45.0% |
! | AATGCTACCATGGGCTTGTT+TGG | + | tig0028364:32762-32781 | Msa1437840:intron | 45.0% |
TAACAAGGGCCTGTTTGGAT+TGG | - | tig0028364:33072-33091 | Msa1437840:intergenic | 45.0% | |
CTCTCTCAAGCAGTCTAACA+AGG | - | tig0028364:33087-33106 | Msa1437840:intergenic | 45.0% | |
AGACTGCTTGAGAGAGCTTA+TGG | + | tig0028364:33091-33110 | Msa1437840:intron | 45.0% | |
ACCAAAACTACCACTGTCGA+GGG | + | tig0028364:33322-33341 | Msa1437840:intron | 45.0% | |
TTACTCTTATCCCTCGACAG+TGG | - | tig0028364:33335-33354 | Msa1437840:intergenic | 45.0% | |
TTCAGGAGTCCACGAAAACA+TGG | - | tig0028364:33704-33723 | Msa1437840:intergenic | 45.0% | |
TCTGGAAAGGTAAACGACGA+AGG | - | tig0028364:34374-34393 | Msa1437840:intergenic | 45.0% | |
CACAACACCTACAGTGCAAA+TGG | - | tig0028364:34537-34556 | Msa1437840:intergenic | 45.0% | |
!! | CGATGTATTTCTGGTGCATC+TGG | - | tig0028364:34589-34608 | Msa1437840:intergenic | 45.0% |
TCAGCCGAACGATGTATTTC+TGG | - | tig0028364:34598-34617 | Msa1437840:intergenic | 45.0% | |
TCGTTCGGCTGAGTTATATG+AGG | + | tig0028364:34606-34625 | Msa1437840:CDS | 45.0% | |
CGAGGTAGAGTTATAGGTTC+AGG | + | tig0028364:34663-34682 | Msa1437840:intron | 45.0% | |
GTGTGTTGCATTTGCAGTTG+TGG | + | tig0028364:34804-34823 | Msa1437840:intron | 45.0% | |
GTCTCGATATTGTCGGTGTA+CGG | + | tig0028364:34973-34992 | Msa1437840:intron | 45.0% | |
CCTTTGACCCTGTTATCCAA+CGG | + | tig0028364:35607-35626 | Msa1437840:CDS | 45.0% | |
CTTTGACCCTGTTATCCAAC+GGG | + | tig0028364:35608-35627 | Msa1437840:CDS | 45.0% | |
TGCATACCCGTTGGATAACA+GGG | - | tig0028364:35617-35636 | Msa1437840:intergenic | 45.0% | |
GTATGCACTTACGACGTTGA+GGG | + | tig0028364:35630-35649 | Msa1437840:intron | 45.0% | |
TGACTGGCACAACAAAGTGA+AGG | - | tig0028364:35666-35685 | Msa1437840:intergenic | 45.0% | |
AAGAGGATGGAGGAATACAC+AGG | + | tig0028364:35722-35741 | Msa1437840:CDS | 45.0% | |
TCACCTTCCATTCGTGATAG+AGG | + | tig0028364:35754-35773 | Msa1437840:CDS | 45.0% | |
TCGTCTAATCCACCTGGTTA+TGG | + | tig0028364:35811-35830 | Msa1437840:CDS | 45.0% | |
! | CTGTGAAAGAAGTACACCAG+AGG | - | tig0028364:35896-35915 | Msa1437840:intergenic | 45.0% |
CTCTGGTGTACTTCTTTCAC+AGG | + | tig0028364:35894-35913 | Msa1437840:CDS | 45.0% | |
CTTTCACAGGCAAAGTCACT+TGG | + | tig0028364:35907-35926 | Msa1437840:CDS | 45.0% | |
ACAGGCAAAGTCACTTGGTA+AGG | + | tig0028364:35912-35931 | Msa1437840:CDS | 45.0% | |
CAGGCAAAGTCACTTGGTAA+GGG | + | tig0028364:35913-35932 | Msa1437840:CDS | 45.0% | |
GTTGCATGCAAGCAAACAGA+AGG | + | tig0028364:35960-35979 | Msa1437840:CDS | 45.0% | |
ATCTCTCCGGTCATCAAGTT+TGG | + | tig0028364:36041-36060 | Msa1437840:CDS | 45.0% | |
CGGTCATCAAGTTTGGATCT+AGG | + | tig0028364:36048-36067 | Msa1437840:CDS | 45.0% | |
! | TGTCAAATGATGGGATGCAG+AGG | - | tig0028364:36265-36284 | Msa1437840:intergenic | 45.0% |
ACAACAGAGCCTACTGCTTA+TGG | + | tig0028364:36294-36313 | Msa1437840:CDS | 45.0% | |
TAGTAACCGAAATGGTGGTC+TGG | + | tig0028364:36329-36348 | Msa1437840:CDS | 45.0% | |
AGTAACCGAAATGGTGGTCT+GGG | + | tig0028364:36330-36349 | Msa1437840:CDS | 45.0% | |
TGACAATAGTGACATCAGGG+AGG | + | tig0028364:36497-36516 | Msa1437840:CDS | 45.0% | |
TTGAGTGAAGGACTTAGGTC+AGG | + | tig0028364:36753-36772 | Msa1437840:CDS | 45.0% | |
ATAGTTAAAGGCAGCAACCC+TGG | - | tig0028364:36793-36812 | Msa1437840:intergenic | 45.0% | |
TTGTTGCAGCAAGGTCCAAA+GGG | + | tig0028364:36822-36841 | Msa1437840:CDS | 45.0% | |
TCCTCACCATAAAGTTGCAC+AGG | + | tig0028364:36908-36927 | Msa1437840:CDS | 45.0% | |
TCAAAAGGCTTTCGACATGC+TGG | - | tig0028364:36963-36982 | Msa1437840:intergenic | 45.0% | |
! | AGCATGTCGAAAGCCTTTTG+AGG | + | tig0028364:36962-36981 | Msa1437840:CDS | 45.0% |
! | GCATGTCGAAAGCCTTTTGA+GGG | + | tig0028364:36963-36982 | Msa1437840:CDS | 45.0% |
ATTAACCGGGAAAAGACGTG+TGG | - | tig0028364:37008-37027 | Msa1437840:intergenic | 45.0% | |
GCAGCCATGTTCAACAACAT+TGG | + | tig0028364:37049-37068 | Msa1437840:CDS | 45.0% | |
TCTAGTGAACGTAACAGTGC+AGG | - | tig0028364:37113-37132 | Msa1437840:intergenic | 45.0% | |
! | ATCACGGCCAATTTAGCCTT+TGG | - | tig0028364:37149-37168 | Msa1437840:intergenic | 45.0% |
!! | GCAGAAGGTGCTGCTAATAT+TGG | + | tig0028364:37209-37228 | Msa1437840:CDS | 45.0% |
! | GCTTGCTAAGTTAACCCCTT+TGG | + | tig0028364:37247-37266 | Msa1437840:CDS | 45.0% |
TAGGTCTACTTCAATGCGAG+GGG | - | tig0028364:37423-37442 | Msa1437840:intergenic | 45.0% | |
CTAGGTCTACTTCAATGCGA+GGG | - | tig0028364:37424-37443 | Msa1437840:intergenic | 45.0% | |
ACTAGGTCTACTTCAATGCG+AGG | - | tig0028364:37425-37444 | Msa1437840:intergenic | 45.0% | |
GACGTTCCTACAACATCAGA+TGG | - | tig0028364:37500-37519 | Msa1437840:intergenic | 45.0% | |
GTAGGAACGTCATCTGAAGA+TGG | + | tig0028364:37509-37528 | Msa1437840:CDS | 45.0% | |
TACCTTGGAAGATATTCGGC+TGG | + | tig0028364:37560-37579 | Msa1437840:CDS | 45.0% | |
AACCAGCCGAATATCTTCCA+AGG | - | tig0028364:37565-37584 | Msa1437840:intergenic | 45.0% | |
TCACATTCAACAGAAGCTGC+TGG | - | tig0028364:37656-37675 | Msa1437840:intergenic | 45.0% | |
AGCAGCTTCTGTTGAATGTG+AGG | + | tig0028364:37655-37674 | Msa1437840:CDS | 45.0% | |
GACTCTAATTGTGACAGTCC+TGG | + | tig0028364:37713-37732 | Msa1437840:CDS | 45.0% | |
ATCTAGCCAACTTGGACAAG+TGG | + | tig0028364:37796-37815 | Msa1437840:CDS | 45.0% | |
TACTGTCCACTTGTCCAAGT+TGG | - | tig0028364:37805-37824 | Msa1437840:intergenic | 45.0% | |
GGACAGTAGCATGAATTTCG+AGG | + | tig0028364:37817-37836 | Msa1437840:CDS | 45.0% | |
ATCAATTCCATGGCAGACAC+TGG | + | tig0028364:37974-37993 | Msa1437840:CDS | 45.0% | |
TCAATTCCATGGCAGACACT+GGG | + | tig0028364:37975-37994 | Msa1437840:CDS | 45.0% | |
ATGGTGAGTTATGCGACTAG+TGG | + | tig0028364:38022-38041 | Msa1437840:intron | 45.0% | |
AGAGATAAAGAGTGGGTGAG+AGG | + | tig0028364:38097-38116 | Msa1437840:intron | 45.0% | |
AAAGAGTGGGTGAGAGGAAT+AGG | + | tig0028364:38103-38122 | Msa1437840:intron | 45.0% | |
ATTGAGTAAACAGGGCCATG+AGG | - | tig0028364:38287-38306 | Msa1437840:intergenic | 45.0% | |
AGTTGGCTGTCTAGTTAGAG+GGG | - | tig0028364:38344-38363 | Msa1437840:intergenic | 45.0% | |
CAGTTGGCTGTCTAGTTAGA+GGG | - | tig0028364:38345-38364 | Msa1437840:intergenic | 45.0% | |
GAAAATCGTCTACGGTAGCA+GGG | + | tig0028364:38479-38498 | Msa1437840:intron | 45.0% | |
ATACCTTGGTCCAAACAGAC+TGG | - | tig0028364:38771-38790 | Msa1437840:intergenic | 45.0% | |
TTGAGCTTGACGTGCATTTC+AGG | + | tig0028364:39344-39363 | Msa1437840:intron | 45.0% | |
TTGGCGTAATTCATAGAGGC+TGG | + | tig0028364:39417-39436 | Msa1437840:intron | 45.0% | |
GGTTGAGACAAATTGGTCCA+TGG | + | tig0028364:39583-39602 | Msa1437840:intron | 45.0% | |
CTGCAACTCACAAAAAGCCA+TGG | - | tig0028364:39603-39622 | Msa1437840:intergenic | 45.0% | |
!! | AGTTGGTAGCAAGATAGTGG+TGG | + | tig0028364:39709-39728 | Msa1437840:intron | 45.0% |
! | TAGCAAGATAGTGGTGGAAC+AGG | + | tig0028364:39715-39734 | Msa1437840:intron | 45.0% |
! | CTATGGGTTTGGTATCAGTG+TGG | - | tig0028364:39763-39782 | Msa1437840:intergenic | 45.0% |
CCTCCTCACCTATTCACTAT+GGG | - | tig0028364:39779-39798 | Msa1437840:intergenic | 45.0% | |
CCATAGTGAATAGGTGAGGA+GGG | + | tig0028364:39777-39796 | Msa1437840:intron | 45.0% | |
TGGGATCCACAAATCATGAC+TGG | + | tig0028364:39861-39880 | Msa1437840:intron | 45.0% | |
GGGATCCACAAATCATGACT+GGG | + | tig0028364:39862-39881 | Msa1437840:intron | 45.0% | |
CTCAAGGATGTAGGAGACAT+TGG | + | tig0028364:39892-39911 | Msa1437840:intron | 45.0% | |
AGGCAATTCAACAAGATGGC+TGG | + | tig0028364:39939-39958 | Msa1437840:intron | 45.0% | |
CACCAATCTGAAGAGCTGTT+TGG | + | tig0028364:39968-39987 | Msa1437840:intron | 45.0% | |
! | GGCTGCATTTAGGATTGATG+GGG | + | tig0028364:40151-40170 | Msa1437840:intron | 45.0% |
GCAGCAGAAAAAGATGGGAA+TGG | + | tig0028364:40193-40212 | Msa1437840:intron | 45.0% | |
CTCAACCCACAAATCTGGTT+TGG | + | tig0028364:41128-41147 | Msa1437840:intron | 45.0% | |
!! | GATTTTGACGGTTGTGCTTG+AGG | + | tig0028364:41414-41433 | Msa1437840:CDS | 45.0% |
AGGACAACTTTGGCTACCTT+AGG | - | tig0028364:41748-41767 | Msa1437840:intergenic | 45.0% | |
GGATGGAAGAAACTGAGACT+AGG | - | tig0028364:41806-41825 | Msa1437840:intergenic | 45.0% | |
TCAGGTTATTGTCCCTCTAC+TGG | + | tig0028364:42018-42037 | Msa1437840:intron | 45.0% | |
CATCATCGGTAACCAGTAGA+GGG | - | tig0028364:42033-42052 | Msa1437840:intergenic | 45.0% | |
TCATCATCGGTAACCAGTAG+AGG | - | tig0028364:42034-42053 | Msa1437840:intergenic | 45.0% | |
! | TACCAATGTGCTGGTGATAG+CGG | + | tig0028364:42196-42215 | Msa1437840:intron | 45.0% |
ATCGAACCAAACCGATCCAA+CGG | + | tig0028364:42250-42269 | Msa1437840:intron | 45.0% | |
! | AGTTTTCCGAACCGTTGGAT+CGG | - | tig0028364:42264-42283 | Msa1437840:intergenic | 45.0% |
!! | CGAACCGTTTGAGTTTTGCA+AGG | + | tig0028364:42288-42307 | Msa1437840:intron | 45.0% |
GTGTTTACATATAGGGACGG+AGG | - | tig0028364:42517-42536 | Msa1437840:intergenic | 45.0% | |
! | AGGGTGCTTAGATTTAGGGA+CGG | + | tig0028364:42554-42573 | Msa1437840:intron | 45.0% |
TGCTTAGATTTAGGGACGGA+GGG | + | tig0028364:42558-42577 | Msa1437840:intron | 45.0% | |
!! | TTCAGTTTGGTTCGGTTCAG+CGG | + | tig0028364:42868-42887 | Msa1437840:intron | 45.0% |
TTACAAGTATCACCAGCCAG+GGG | - | tig0028364:42924-42943 | Msa1437840:intergenic | 45.0% | |
AGGAGGATACAACAGTTTGC+TGG | - | tig0028364:43103-43122 | Msa1437840:intergenic | 45.0% | |
TTCTCATGATACAGCTAGCC+TGG | - | tig0028364:43207-43226 | Msa1437840:intergenic | 45.0% | |
! | CAGATGTTCGCAAGGTACTT+GGG | + | tig0028364:43466-43485 | Msa1437840:intron | 45.0% |
! | TCAGATGTTTGAGACCTCTC+TGG | + | tig0028364:43591-43610 | Msa1437840:intron | 45.0% |
TTGAGACCTCTCTGGTTATC+TGG | + | tig0028364:43599-43618 | Msa1437840:intron | 45.0% | |
TAGGTACCAGATAACCAGAG+AGG | - | tig0028364:43608-43627 | Msa1437840:intergenic | 45.0% | |
CAAATGTTGGGGATGTGAGA+TGG | + | tig0028364:43835-43854 | Msa1437840:intron | 45.0% | |
GCATACAAGGGATGAAGTTG+GGG | + | tig0028364:43912-43931 | Msa1437840:intron | 45.0% | |
TCTACGACAAGGCTAGACTA+AGG | - | tig0028364:43972-43991 | Msa1437840:intergenic | 45.0% | |
ATACTAGCGCTTCTACGACA+AGG | - | tig0028364:43983-44002 | Msa1437840:intergenic | 45.0% | |
!! | TCGTAGAAGCGCTAGTATTG+AGG | + | tig0028364:43985-44004 | Msa1437840:intron | 45.0% |
! | TGACTTTTCAGAGACAGTGG+TGG | - | tig0028364:44828-44847 | Msa1437840:intergenic | 45.0% |
! | CGATGACTTTTCAGAGACAG+TGG | - | tig0028364:44831-44850 | Msa1437840:intergenic | 45.0% |
! | TGTCTCTGAAAAGTCATCGC+CGG | + | tig0028364:44832-44851 | Msa1437840:intron | 45.0% |
TGAGCTTCCATGGGATGATT+GGG | - | tig0028364:44858-44877 | Msa1437840:intergenic | 45.0% | |
AACTTGCAATGGGCGAGTTT+AGG | + | tig0028364:44905-44924 | Msa1437840:intron | 45.0% | |
ACTTGCAATGGGCGAGTTTA+GGG | + | tig0028364:44906-44925 | Msa1437840:intron | 45.0% | |
GAGTTTAGGGGGAACAAGTA+GGG | + | tig0028364:44919-44938 | Msa1437840:intron | 45.0% | |
AGTTTAGGGGGAACAAGTAG+GGG | + | tig0028364:44920-44939 | Msa1437840:intron | 45.0% | |
AAAAATCGGACAGCAGTAGC+AGG | - | tig0028364:45025-45044 | Msa1437840:intergenic | 45.0% | |
GTTTATAGGAAGGACAGCCT+AGG | - | tig0028364:45240-45259 | Msa1437840:intergenic | 45.0% | |
!!! | TCCTTGTATTTTGGTGCTGG+CGG | + | tig0028364:45427-45446 | Msa1437840:intron | 45.0% |
CTGAATGGCTTAAATCTGGC+TGG | + | tig0028364:45538-45557 | Msa1437840:intron | 45.0% | |
! | GCTTCAACTGTGTGCTGTTA+AGG | - | tig0028364:45770-45789 | Msa1437840:intergenic | 45.0% |
TAACAGCACACAGTTGAAGC+TGG | + | tig0028364:45770-45789 | Msa1437840:CDS | 45.0% | |
ATCAATTGCTTTGCCTGTCC+TGG | - | tig0028364:45826-45845 | Msa1437840:intergenic | 45.0% | |
!!! | AAATAATTTTTATATAAAAC+CGG | - | tig0028364:30822-30841 | Msa1437840:intergenic | 5.0% |
!!! | TATATAAAAATTATTTTTCA+AGG | + | tig0028364:30826-30845 | Msa1437840:intron | 5.0% |
!!! | ATTTTAATTATTTATTTCTT+TGG | + | tig0028364:40081-40100 | Msa1437840:intron | 5.0% |
TCACTTCGGGAAGTTAAGCG+CGG | - | tig0028364:28353-28372 | None:intergenic | 50.0% | |
! | GATCCAAATGGAGGAAGCGT+TGG | + | tig0028364:28390-28409 | Msa1437840:exon | 50.0% |
GTTCCAACGCTTCCTCCATT+TGG | - | tig0028364:28396-28415 | Msa1437840:intergenic | 50.0% | |
GCGCCAAAGACACAAAGGAA+AGG | + | tig0028364:28422-28441 | Msa1437840:CDS | 50.0% | |
GACACAAAGGAAAGGATGGC+TGG | + | tig0028364:28430-28449 | Msa1437840:CDS | 50.0% | |
AAAGGAAAGGATGGCTGGTG+TGG | + | tig0028364:28435-28454 | Msa1437840:CDS | 50.0% | |
GAAGTGCACCTTGAGAGACA+CGG | - | tig0028364:28564-28583 | Msa1437840:intergenic | 50.0% | |
ATCACCGAGACGATCAACGA+CGG | - | tig0028364:28656-28675 | Msa1437840:intergenic | 50.0% | |
TCAGTCTGACACCACACATG+TGG | - | tig0028364:29193-29212 | Msa1437840:intergenic | 50.0% | |
CATGGCCAATGGGTCAAAGT+AGG | + | tig0028364:29957-29976 | Msa1437840:intron | 50.0% | |
AAAGAGCAGGATCCTCAGCT+TGG | + | tig0028364:30161-30180 | Msa1437840:CDS | 50.0% | |
AAGAGCAGGATCCTCAGCTT+GGG | + | tig0028364:30162-30181 | Msa1437840:CDS | 50.0% | |
CAAAAGCTGGAGAGTCAGAG+AGG | + | tig0028364:30189-30208 | Msa1437840:CDS | 50.0% | |
AGCCCGTTGAAGTGGAAGTT+CGG | - | tig0028364:30260-30279 | Msa1437840:intergenic | 50.0% | |
ACACCTGAGGCTAGCATTTG+TGG | + | tig0028364:31059-31078 | Msa1437840:intron | 50.0% | |
CACCTGAGGCTAGCATTTGT+GGG | + | tig0028364:31060-31079 | Msa1437840:intron | 50.0% | |
! | TACCCACAAATGCTAGCCTC+AGG | - | tig0028364:31065-31084 | Msa1437840:intergenic | 50.0% |
TGGTTGAATCCCTTCTAGCC+TGG | - | tig0028364:31404-31423 | Msa1437840:intergenic | 50.0% | |
GGCCAAAAGTTCTTCAAGGG+AGG | + | tig0028364:31513-31532 | Msa1437840:CDS | 50.0% | |
! | GGCCTCCCTTGAAGAACTTT+TGG | - | tig0028364:31518-31537 | Msa1437840:intergenic | 50.0% |
! | TCAAGGGAGGCCTCTCTTTT+TGG | + | tig0028364:31526-31545 | Msa1437840:CDS | 50.0% |
TGTAGCCAACATGCATCCCT+TGG | + | tig0028364:31936-31955 | Msa1437840:intron | 50.0% | |
GTAGCCAACATGCATCCCTT+GGG | + | tig0028364:31937-31956 | Msa1437840:intron | 50.0% | |
GTTACCCAAGGGATGCATGT+TGG | - | tig0028364:31944-31963 | Msa1437840:intergenic | 50.0% | |
ACTTCCCAGCTAAGAAGGGA+AGG | - | tig0028364:32249-32268 | Msa1437840:intergenic | 50.0% | |
AGCAGCAGAAGGTGATGTCA+CGG | + | tig0028364:32322-32341 | Msa1437840:intron | 50.0% | |
! | CGAACGGACCAGTCTTTTTC+AGG | - | tig0028364:32428-32447 | Msa1437840:intergenic | 50.0% |
CAGTCTAACAAGGGCCTGTT+TGG | - | tig0028364:33077-33096 | Msa1437840:intergenic | 50.0% | |
GACCAAAACTACCACTGTCG+AGG | + | tig0028364:33321-33340 | Msa1437840:intron | 50.0% | |
! | TCCCTCGACAGTGGTAGTTT+TGG | - | tig0028364:33326-33345 | Msa1437840:intergenic | 50.0% |
TGGGGGATGTGGGCTTATTT+AGG | + | tig0028364:33406-33425 | Msa1437840:intron | 50.0% | |
GGGGGATGTGGGCTTATTTA+GGG | + | tig0028364:33407-33426 | Msa1437840:intron | 50.0% | |
GGGGATGTGGGCTTATTTAG+GGG | + | tig0028364:33408-33427 | Msa1437840:intron | 50.0% | |
ATAATCAGCAGCGCCTGACA+AGG | - | tig0028364:33681-33700 | Msa1437840:intergenic | 50.0% | |
!! | TTGCACGAAGCACTGCATTC+CGG | - | tig0028364:34458-34477 | Msa1437840:intergenic | 50.0% |
GTGCATCTGGCCAATGTTCT+AGG | - | tig0028364:34576-34595 | Msa1437840:intergenic | 50.0% | |
CGTTTCAGATGCAATGAGCG+AGG | + | tig0028364:34645-34664 | Msa1437840:CDS | 50.0% | |
CCGTTGGATAACAGGGTCAA+AGG | - | tig0028364:35610-35629 | Msa1437840:intergenic | 50.0% | |
GTGCATACCCGTTGGATAAC+AGG | - | tig0028364:35618-35637 | Msa1437840:intergenic | 50.0% | |
GGTATGCACTTACGACGTTG+AGG | + | tig0028364:35629-35648 | Msa1437840:intron | 50.0% | |
GCACCTCTATCACGAATGGA+AGG | - | tig0028364:35760-35779 | Msa1437840:intergenic | 50.0% | |
CAGTGCACCTCTATCACGAA+TGG | - | tig0028364:35764-35783 | Msa1437840:intergenic | 50.0% | |
!! | AGGTGGATTAGACGAAGCAG+AGG | - | tig0028364:35806-35825 | Msa1437840:intergenic | 50.0% |
TCTGCTTCGTCTAATCCACC+TGG | + | tig0028364:35805-35824 | Msa1437840:CDS | 50.0% | |
GCAGATGTTCCATAACCAGG+TGG | - | tig0028364:35823-35842 | Msa1437840:intergenic | 50.0% | |
AGGGTCAACTTCTGCACTAG+GGG | - | tig0028364:36208-36227 | Msa1437840:intergenic | 50.0% | |
GAGGGTCAACTTCTGCACTA+GGG | - | tig0028364:36209-36228 | Msa1437840:intergenic | 50.0% | |
ACAAGCCCAGACCACCATTT+CGG | - | tig0028364:36338-36357 | Msa1437840:intergenic | 50.0% | |
ATAGTGACATCAGGGAGGCT+AGG | + | tig0028364:36502-36521 | Msa1437840:CDS | 50.0% | |
CTGGATGCCCCTTATAGAGA+AGG | + | tig0028364:36558-36577 | Msa1437840:CDS | 50.0% | |
! | GACTTAGGTCAGGTTCTGAC+TGG | + | tig0028364:36763-36782 | Msa1437840:CDS | 50.0% |
!! | AGGTTCTGACTGGTCTTCCA+GGG | + | tig0028364:36773-36792 | Msa1437840:CDS | 50.0% |
CTTCACTCGTTGTTGCAGCA+AGG | + | tig0028364:36813-36832 | Msa1437840:CDS | 50.0% | |
GTTGTTGCAGCAAGGTCCAA+AGG | + | tig0028364:36821-36840 | Msa1437840:CDS | 50.0% | |
GCCTGTGCAACTTTATGGTG+AGG | - | tig0028364:36912-36931 | Msa1437840:intergenic | 50.0% | |
GAGCAGCCTGTGCAACTTTA+TGG | - | tig0028364:36917-36936 | Msa1437840:intergenic | 50.0% | |
GGCTGCCTAACAACCTCTTT+AGG | - | tig0028364:37035-37054 | Msa1437840:intergenic | 50.0% | |
!! | GCGAGGGGTGTACTGTTTTA+GGG | - | tig0028364:37408-37427 | Msa1437840:intergenic | 50.0% |
!! | TGCGAGGGGTGTACTGTTTT+AGG | - | tig0028364:37409-37428 | Msa1437840:intergenic | 50.0% |
! | GCTGGTTCCCTAGATAGTGA+TGG | + | tig0028364:37578-37597 | Msa1437840:CDS | 50.0% |
GGTTCCCTAGATAGTGATGG+TGG | + | tig0028364:37581-37600 | Msa1437840:CDS | 50.0% | |
CCTGCCACCATCACTATCTA+GGG | - | tig0028364:37588-37607 | Msa1437840:intergenic | 50.0% | |
TCCTGCCACCATCACTATCT+AGG | - | tig0028364:37589-37608 | Msa1437840:intergenic | 50.0% | |
!! | ATAGTGATGGTGGCAGGAAG+TGG | + | tig0028364:37591-37610 | Msa1437840:CDS | 50.0% |
GGCTCTCAATCTAGCCAACT+TGG | + | tig0028364:37788-37807 | Msa1437840:CDS | 50.0% | |
GTGAGTTATGCGACTAGTGG+AGG | + | tig0028364:38025-38044 | Msa1437840:intron | 50.0% | |
CGACTAGTGGAGGAACAAGT+TGG | + | tig0028364:38035-38054 | Msa1437840:intron | 50.0% | |
AGTGGGTGAGAGGAATAGGA+GGG | + | tig0028364:38107-38126 | Msa1437840:intron | 50.0% | |
GCAGTTGGCTGTCTAGTTAG+AGG | - | tig0028364:38346-38365 | Msa1437840:intergenic | 50.0% | |
GGAGGGATCATTAGAGCAGT+TGG | - | tig0028364:38361-38380 | Msa1437840:intergenic | 50.0% | |
GGAAAATCGTCTACGGTAGC+AGG | + | tig0028364:38478-38497 | Msa1437840:intron | 50.0% | |
TGACCAGTCTGTTTGGACCA+AGG | + | tig0028364:38765-38784 | Msa1437840:CDS | 50.0% | |
AATTGCGTATGGGATTGCCG+AGG | + | tig0028364:39487-39506 | Msa1437840:intron | 50.0% | |
TCCCAGATTCAATCTGGCCT+CGG | - | tig0028364:39507-39526 | Msa1437840:intergenic | 50.0% | |
CCCATAGTGAATAGGTGAGG+AGG | + | tig0028364:39776-39795 | Msa1437840:intron | 50.0% | |
CCCTCCTCACCTATTCACTA+TGG | - | tig0028364:39780-39799 | Msa1437840:intergenic | 50.0% | |
!! | CTTTGGAACCGACCTGAAAC+TGG | + | tig0028364:39994-40013 | Msa1437840:intron | 50.0% |
GAACCGACCTGAAACTGGTT+TGG | + | tig0028364:39999-40018 | Msa1437840:intron | 50.0% | |
!! | CTTTGGCGGGATGTTTTGGA+AGG | + | tig0028364:40098-40117 | Msa1437840:intron | 50.0% |
GAGCTCTCTGACAGAGGAAT+CGG | - | tig0028364:41452-41471 | Msa1437840:intergenic | 50.0% | |
AAGAGTGAGCTCTCTGACAG+AGG | - | tig0028364:41458-41477 | Msa1437840:intergenic | 50.0% | |
!! | AATGTGCTGGTGATAGCGGT+GGG | + | tig0028364:42200-42219 | Msa1437840:intron | 50.0% |
ACCAAACCGATCCAACGGTT+CGG | + | tig0028364:42255-42274 | Msa1437840:intron | 50.0% | |
! | GGTTCAGTTTTCCGAACCGT+TGG | - | tig0028364:42269-42288 | Msa1437840:intergenic | 50.0% |
GTGCTTAGATTTAGGGACGG+AGG | + | tig0028364:42557-42576 | Msa1437840:intron | 50.0% | |
!! | TTTGGTTCGGTTCAGCGGTT+TGG | + | tig0028364:42873-42892 | Msa1437840:intron | 50.0% |
!! | TTCGGTTCAGCGGTTTGGTT+CGG | + | tig0028364:42878-42897 | Msa1437840:intron | 50.0% |
! | GCAGATGTTCGCAAGGTACT+TGG | + | tig0028364:43465-43484 | Msa1437840:intron | 50.0% |
GTGAGCTTCCATGGGATGAT+TGG | - | tig0028364:44859-44878 | Msa1437840:intergenic | 50.0% | |
TCCTTGCAGTGAGCTTCCAT+GGG | - | tig0028364:44867-44886 | Msa1437840:intergenic | 50.0% | |
TTCCTTGCAGTGAGCTTCCA+TGG | - | tig0028364:44868-44887 | Msa1437840:intergenic | 50.0% | |
CTTGCAATGGGCGAGTTTAG+GGG | + | tig0028364:44907-44926 | Msa1437840:intron | 50.0% | |
TTGCAATGGGCGAGTTTAGG+GGG | + | tig0028364:44908-44927 | Msa1437840:intron | 50.0% | |
CGAGTTTAGGGGGAACAAGT+AGG | + | tig0028364:44918-44937 | Msa1437840:intron | 50.0% | |
GAAGTTGACCCCTCATTCCT+AGG | + | tig0028364:45220-45239 | Msa1437840:intron | 50.0% | |
AAGGACAGCCTAGGAATGAG+GGG | - | tig0028364:45231-45250 | Msa1437840:intergenic | 50.0% | |
GAAGGACAGCCTAGGAATGA+GGG | - | tig0028364:45232-45251 | Msa1437840:intergenic | 50.0% | |
ACCGCCAGCACCAAAATACA+AGG | - | tig0028364:45431-45450 | Msa1437840:intergenic | 50.0% | |
!! | GACCGTTGTTTTCTGTCTCG+TGG | + | tig0028364:45698-45717 | Msa1437840:intron | 50.0% |
CGAATCGAATCTCACAAGCC+AGG | + | tig0028364:45805-45824 | Msa1437840:CDS | 50.0% | |
!! | CAGTGGTGTTGTTGAGGGTG+TGG | - | tig0028364:28154-28173 | None:intergenic | 55.0% |
CACACGCGCCAAAGACACAA+AGG | + | tig0028364:28417-28436 | Msa1437840:CDS | 55.0% | |
CGTTAGAAGTAGTCGTCGCG+CGG | - | tig0028364:28701-28720 | Msa1437840:intergenic | 55.0% | |
!! | CTATACCGACACGTCGACTC+TGG | + | tig0028364:29133-29152 | Msa1437840:intron | 55.0% |
AACCTCCGAGTGCTTTGCAC+AGG | - | tig0028364:29412-29431 | Msa1437840:intergenic | 55.0% | |
GGAAGGATAGCCCGTTGAAG+TGG | - | tig0028364:30268-30287 | Msa1437840:intergenic | 55.0% | |
! | AGGGAGGCCTCTCTTTTTGG+AGG | + | tig0028364:31529-31548 | Msa1437840:CDS | 55.0% |
AGTGCGGTGAATGTGGAGAG+TGG | + | tig0028364:31748-31767 | Msa1437840:intron | 55.0% | |
CGTGGACTCCTGAAGCAACT+TGG | + | tig0028364:33710-33729 | Msa1437840:CDS | 55.0% | |
GGACTCCTGAAGCAACTTGG+CGG | + | tig0028364:33713-33732 | Msa1437840:CDS | 55.0% | |
AAGGTCCGCCAAGTTGCTTC+AGG | - | tig0028364:33721-33740 | Msa1437840:intergenic | 55.0% | |
CAGTTGCGCAGCATCTGGAA+AGG | - | tig0028364:34387-34406 | Msa1437840:intergenic | 55.0% | |
CTTTGCAGTTGCGCAGCATC+TGG | - | tig0028364:34392-34411 | Msa1437840:intergenic | 55.0% | |
GGAATGCAGTGCTTCGTGCA+AGG | + | tig0028364:34457-34476 | Msa1437840:CDS | 55.0% | |
GCAGTGCTTCGTGCAAGGTA+TGG | + | tig0028364:34462-34481 | Msa1437840:intron | 55.0% | |
AATAGGCGACGAGAACGCTC+TGG | - | tig0028364:35582-35601 | Msa1437840:intergenic | 55.0% | |
CGTCGTAAGTGCATACCCGT+TGG | - | tig0028364:35626-35645 | Msa1437840:intergenic | 55.0% | |
GACGAAGCAGAGGCTTGACT+GGG | - | tig0028364:35796-35815 | Msa1437840:intergenic | 55.0% | |
AGACGAAGCAGAGGCTTGAC+TGG | - | tig0028364:35797-35816 | Msa1437840:intergenic | 55.0% | |
GGAGGGTCAACTTCTGCACT+AGG | - | tig0028364:36210-36229 | Msa1437840:intergenic | 55.0% | |
AAAGGCGGATCACGAGACGA+TGG | - | tig0028364:36231-36250 | Msa1437840:intergenic | 55.0% | |
GCAACTGGACGTATGTCTGC+TGG | + | tig0028364:36645-36664 | Msa1437840:CDS | 55.0% | |
!! | CAGGTTCTGACTGGTCTTCC+AGG | + | tig0028364:36772-36791 | Msa1437840:CDS | 55.0% |
GGTGAGGATCATCCAAGTGC+TGG | - | tig0028364:36896-36915 | Msa1437840:intergenic | 55.0% | |
!! | CCCTAGATAGTGATGGTGGC+AGG | + | tig0028364:37585-37604 | Msa1437840:CDS | 55.0% |
GAGTGGGTGAGAGGAATAGG+AGG | + | tig0028364:38106-38125 | Msa1437840:intron | 55.0% | |
TGCCGAGGCCAGATTGAATC+TGG | + | tig0028364:39502-39521 | Msa1437840:intron | 55.0% | |
GCCGAGGCCAGATTGAATCT+GGG | + | tig0028364:39503-39522 | Msa1437840:intron | 55.0% | |
! | AGTGGTGGAACAGGTCACAG+AGG | + | tig0028364:39724-39743 | Msa1437840:intron | 55.0% |
GTGGAACAGGTCACAGAGGA+TGG | + | tig0028364:39728-39747 | Msa1437840:intron | 55.0% | |
CACCGCTATCACCAGCACAT+TGG | - | tig0028364:42201-42220 | Msa1437840:intergenic | 55.0% | |
!! | CAATGTGCTGGTGATAGCGG+TGG | + | tig0028364:42199-42218 | Msa1437840:intron | 55.0% |
TCCGAACCGTTGGATCGGTT+TGG | - | tig0028364:42259-42278 | Msa1437840:intergenic | 55.0% | |
!! | CAGCGGTTTGGTTCGGTTTG+TGG | + | tig0028364:42885-42904 | Msa1437840:intron | 55.0% |
! | TGGTTCTTTTTGCCCACCCC+TGG | + | tig0028364:42905-42924 | Msa1437840:intron | 55.0% |
AAGTATCACCAGCCAGGGGT+GGG | - | tig0028364:42920-42939 | Msa1437840:intergenic | 55.0% | |
CCTGCCCACAAGCTGAAGAA+AGG | - | tig0028364:43370-43389 | Msa1437840:intergenic | 55.0% | |
CCTTTCTTCAGCTTGTGGGC+AGG | + | tig0028364:43367-43386 | Msa1437840:intron | 55.0% | |
GCTCTCTCAGGAGGAACTGA+TGG | + | tig0028364:43389-43408 | Msa1437840:CDS | 55.0% | |
CCTTGCGAACATCTGCACTC+TGG | - | tig0028364:43461-43480 | Msa1437840:intergenic | 55.0% | |
CCAGAGTGCAGATGTTCGCA+AGG | + | tig0028364:43458-43477 | Msa1437840:CDS | 55.0% | |
TGGCAGATGGAGATGGAGTG+AGG | - | tig0028364:44808-44827 | Msa1437840:intergenic | 55.0% | |
ACAGTGGTGGCAGATGGAGA+TGG | - | tig0028364:44815-44834 | Msa1437840:intergenic | 55.0% | |
TCAGAGACAGTGGTGGCAGA+TGG | - | tig0028364:44821-44840 | Msa1437840:intergenic | 55.0% | |
CTTCCATGGGATGATTGGGC+CGG | - | tig0028364:44854-44873 | Msa1437840:intergenic | 55.0% | |
TCCCATGGAAGCTCACTGCA+AGG | + | tig0028364:44863-44882 | Msa1437840:intron | 55.0% | |
GGAAGGACAGCCTAGGAATG+AGG | - | tig0028364:45233-45252 | Msa1437840:intergenic | 55.0% | |
CGAATCTCACAAGCCAGGAC+AGG | + | tig0028364:45810-45829 | Msa1437840:CDS | 55.0% | |
ATGCTCGCCGGAGAGAACAG+CGG | - | tig0028364:28602-28621 | Msa1437840:intergenic | 60.0% | |
ACCGAGACGATCAACGACGG+CGG | - | tig0028364:28653-28672 | Msa1437840:intergenic | 60.0% | |
! | CACCTGTGCAAAGCACTCGG+AGG | + | tig0028364:29407-29426 | Msa1437840:intron | 60.0% |
! | GCTTTTGTGCGCCCAAGCTG+AGG | - | tig0028364:30176-30195 | Msa1437840:intergenic | 60.0% |
CAGCTTGGGCGCACAAAAGC+TGG | + | tig0028364:30176-30195 | Msa1437840:CDS | 60.0% | |
TCGGGGACATCTGTCTCCTC+TGG | + | tig0028364:35877-35896 | Msa1437840:CDS | 60.0% | |
GCGGATCACGAGACGATGGA+GGG | - | tig0028364:36227-36246 | Msa1437840:intergenic | 60.0% | |
GAGGCAGCAGCTGGAAAAGG+CGG | - | tig0028364:36246-36265 | Msa1437840:intergenic | 60.0% | |
GCAGAGGCAGCAGCTGGAAA+AGG | - | tig0028364:36249-36268 | Msa1437840:intergenic | 60.0% | |
CTGGACGTATGTCTGCTGGC+AGG | + | tig0028364:36649-36668 | Msa1437840:CDS | 60.0% | |
GACGTATGTCTGCTGGCAGG+AGG | + | tig0028364:36652-36671 | Msa1437840:CDS | 60.0% | |
GTATGTCTGCTGGCAGGAGG+AGG | + | tig0028364:36655-36674 | Msa1437840:CDS | 60.0% | |
TGGCAGGAAGTGGAGCTCTC+AGG | + | tig0028364:37601-37620 | Msa1437840:CDS | 60.0% | |
GACGGTTGTGCTTGAGGTGC+TGG | + | tig0028364:41420-41439 | Msa1437840:CDS | 60.0% | |
! | TCTTTTTGCCCACCCCTGGC+TGG | + | tig0028364:42909-42928 | Msa1437840:intron | 60.0% |
CAAGTATCACCAGCCAGGGG+TGG | - | tig0028364:42921-42940 | Msa1437840:intergenic | 60.0% | |
GGGGGAACAAGTAGGGGTCT+TGG | + | tig0028364:44926-44945 | Msa1437840:intron | 60.0% | |
GCTTCCGCCGCTGTTCTCTC+CGG | + | tig0028364:28592-28611 | Msa1437840:CDS | 65.0% | |
CCGAGACGATCAACGACGGC+GGG | - | tig0028364:28652-28671 | Msa1437840:intergenic | 65.0% | |
CCCGCCGTCGTTGATCGTCT+CGG | + | tig0028364:28649-28668 | Msa1437840:CDS | 65.0% | |
GGCGGATCACGAGACGATGG+AGG | - | tig0028364:36228-36247 | Msa1437840:intergenic | 65.0% | |
TGGGATGCAGAGGCAGCAGC+TGG | - | tig0028364:36255-36274 | Msa1437840:intergenic | 65.0% | |
GCTTGTGGGCAGGCTCTCTC+AGG | + | tig0028364:43377-43396 | Msa1437840:intron | 65.0% | |
TGTGGGCAGGCTCTCTCAGG+AGG | + | tig0028364:43380-43399 | Msa1437840:CDS | 65.0% | |
TCGCCGGCCCAATCATCCCA+TGG | + | tig0028364:44848-44867 | Msa1437840:intron | 65.0% | |
CTCGCCGGAGAGAACAGCGG+CGG | - | tig0028364:28599-28618 | Msa1437840:intergenic | 70.0% | |
GCTGGGCCCAGTGTCTGCCA+TGG | - | tig0028364:37984-38003 | Msa1437840:intergenic | 70.0% | |
!! | GCTGGTGATAGCGGTGGGCG+TGG | + | tig0028364:42205-42224 | Msa1437840:intron | 70.0% |
CGTCGCGCGGCGTCACGAAC+AGG | - | tig0028364:28688-28707 | Msa1437840:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0028364 | gene | 28140 | 46191 | 28140 | ID=Msa1437840;Name=Msa1437840 |
tig0028364 | mRNA | 28140 | 46191 | 28140 | ID=Msa1437840-mRNA-1;Parent=Msa1437840;Name=Msa1437840-mRNA-1;_AED=0.06;_eAED=0.06;_QI=257|1|1|1|1|1|21|331|1447 |
tig0028364 | exon | 28140 | 28729 | 28140 | ID=Msa1437840-mRNA-1:exon:10911;Parent=Msa1437840-mRNA-1 |
tig0028364 | exon | 30136 | 30291 | 30136 | ID=Msa1437840-mRNA-1:exon:10912;Parent=Msa1437840-mRNA-1 |
tig0028364 | exon | 30394 | 30456 | 30394 | ID=Msa1437840-mRNA-1:exon:10913;Parent=Msa1437840-mRNA-1 |
tig0028364 | exon | 31141 | 31209 | 31141 | ID=Msa1437840-mRNA-1:exon:10914;Parent=Msa1437840-mRNA-1 |
tig0028364 | exon | 31385 | 31550 | 31385 | ID=Msa1437840-mRNA-1:exon:10915;Parent=Msa1437840-mRNA-1 |
tig0028364 | exon | 32327 | 32488 | 32327 | ID=Msa1437840-mRNA-1:exon:10916;Parent=Msa1437840-mRNA-1 |
tig0028364 | exon | 33687 | 33784 | 33687 | ID=Msa1437840-mRNA-1:exon:10917;Parent=Msa1437840-mRNA-1 |
tig0028364 | exon | 34087 | 34161 | 34087 | ID=Msa1437840-mRNA-1:exon:10918;Parent=Msa1437840-mRNA-1 |
tig0028364 | exon | 34239 | 34307 | 34239 | ID=Msa1437840-mRNA-1:exon:10919;Parent=Msa1437840-mRNA-1 |
tig0028364 | exon | 34393 | 34478 | 34393 | ID=Msa1437840-mRNA-1:exon:10920;Parent=Msa1437840-mRNA-1 |
tig0028364 | exon | 34549 | 34666 | 34549 | ID=Msa1437840-mRNA-1:exon:10921;Parent=Msa1437840-mRNA-1 |
tig0028364 | exon | 35531 | 35629 | 35531 | ID=Msa1437840-mRNA-1:exon:10922;Parent=Msa1437840-mRNA-1 |
tig0028364 | exon | 35712 | 36069 | 35712 | ID=Msa1437840-mRNA-1:exon:10923;Parent=Msa1437840-mRNA-1 |
tig0028364 | exon | 36217 | 38024 | 36217 | ID=Msa1437840-mRNA-1:exon:10924;Parent=Msa1437840-mRNA-1 |
tig0028364 | exon | 38685 | 38786 | 38685 | ID=Msa1437840-mRNA-1:exon:10925;Parent=Msa1437840-mRNA-1 |
tig0028364 | exon | 41403 | 41507 | 41403 | ID=Msa1437840-mRNA-1:exon:10926;Parent=Msa1437840-mRNA-1 |
tig0028364 | exon | 41676 | 41750 | 41676 | ID=Msa1437840-mRNA-1:exon:10927;Parent=Msa1437840-mRNA-1 |
tig0028364 | exon | 41835 | 41903 | 41835 | ID=Msa1437840-mRNA-1:exon:10928;Parent=Msa1437840-mRNA-1 |
tig0028364 | exon | 42022 | 42090 | 42022 | ID=Msa1437840-mRNA-1:exon:10929;Parent=Msa1437840-mRNA-1 |
tig0028364 | exon | 43378 | 43479 | 43378 | ID=Msa1437840-mRNA-1:exon:10930;Parent=Msa1437840-mRNA-1 |
tig0028364 | exon | 45699 | 46191 | 45699 | ID=Msa1437840-mRNA-1:exon:10931;Parent=Msa1437840-mRNA-1 |
tig0028364 | five_prime_UTR | 28140 | 28396 | 28140 | ID=Msa1437840-mRNA-1:five_prime_utr;Parent=Msa1437840-mRNA-1 |
tig0028364 | CDS | 28397 | 28729 | 28397 | ID=Msa1437840-mRNA-1:cds;Parent=Msa1437840-mRNA-1 |
tig0028364 | CDS | 30136 | 30291 | 30136 | ID=Msa1437840-mRNA-1:cds;Parent=Msa1437840-mRNA-1 |
tig0028364 | CDS | 30394 | 30456 | 30394 | ID=Msa1437840-mRNA-1:cds;Parent=Msa1437840-mRNA-1 |
tig0028364 | CDS | 31141 | 31209 | 31141 | ID=Msa1437840-mRNA-1:cds;Parent=Msa1437840-mRNA-1 |
tig0028364 | CDS | 31385 | 31550 | 31385 | ID=Msa1437840-mRNA-1:cds;Parent=Msa1437840-mRNA-1 |
tig0028364 | CDS | 32327 | 32488 | 32327 | ID=Msa1437840-mRNA-1:cds;Parent=Msa1437840-mRNA-1 |
tig0028364 | CDS | 33687 | 33784 | 33687 | ID=Msa1437840-mRNA-1:cds;Parent=Msa1437840-mRNA-1 |
tig0028364 | CDS | 34087 | 34161 | 34087 | ID=Msa1437840-mRNA-1:cds;Parent=Msa1437840-mRNA-1 |
tig0028364 | CDS | 34239 | 34307 | 34239 | ID=Msa1437840-mRNA-1:cds;Parent=Msa1437840-mRNA-1 |
tig0028364 | CDS | 34393 | 34478 | 34393 | ID=Msa1437840-mRNA-1:cds;Parent=Msa1437840-mRNA-1 |
tig0028364 | CDS | 34549 | 34666 | 34549 | ID=Msa1437840-mRNA-1:cds;Parent=Msa1437840-mRNA-1 |
tig0028364 | CDS | 35531 | 35629 | 35531 | ID=Msa1437840-mRNA-1:cds;Parent=Msa1437840-mRNA-1 |
tig0028364 | CDS | 35712 | 36069 | 35712 | ID=Msa1437840-mRNA-1:cds;Parent=Msa1437840-mRNA-1 |
tig0028364 | CDS | 36217 | 38024 | 36217 | ID=Msa1437840-mRNA-1:cds;Parent=Msa1437840-mRNA-1 |
tig0028364 | CDS | 38685 | 38786 | 38685 | ID=Msa1437840-mRNA-1:cds;Parent=Msa1437840-mRNA-1 |
tig0028364 | CDS | 41403 | 41507 | 41403 | ID=Msa1437840-mRNA-1:cds;Parent=Msa1437840-mRNA-1 |
tig0028364 | CDS | 41676 | 41750 | 41676 | ID=Msa1437840-mRNA-1:cds;Parent=Msa1437840-mRNA-1 |
tig0028364 | CDS | 41835 | 41903 | 41835 | ID=Msa1437840-mRNA-1:cds;Parent=Msa1437840-mRNA-1 |
tig0028364 | CDS | 42022 | 42090 | 42022 | ID=Msa1437840-mRNA-1:cds;Parent=Msa1437840-mRNA-1 |
tig0028364 | CDS | 43378 | 43479 | 43378 | ID=Msa1437840-mRNA-1:cds;Parent=Msa1437840-mRNA-1 |
tig0028364 | CDS | 45699 | 45860 | 45699 | ID=Msa1437840-mRNA-1:cds;Parent=Msa1437840-mRNA-1 |
tig0028364 | three_prime_UTR | 45861 | 46191 | 45861 | ID=Msa1437840-mRNA-1:three_prime_utr;Parent=Msa1437840-mRNA-1 |
Gene Sequence |
Protein sequence |