AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1426700

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1426700 MtrunA17_Chr2g0320631 97.955 538 11 0 1 538 1 538 0.0 1099
Msa1426700 MtrunA17_Chr4g0027671 76.580 538 117 4 9 539 8 543 0.0 841
Msa1426700 MtrunA17_Chr1g0179611 69.606 533 141 6 7 529 11 532 0.0 776
Msa1426700 MtrunA17_Chr5g0407121 48.713 505 179 4 19 522 17 442 1.54e-170 489
Msa1426700 MtrunA17_Chr8g0370321 47.817 504 181 5 19 522 17 438 1.55e-166 479
Msa1426700 MtrunA17_Chr4g0058241 37.342 158 92 4 25 182 84 234 2.07e-26 111
Msa1426700 MtrunA17_Chr4g0058241 29.146 199 106 6 296 477 243 423 9.37e-15 76.6
Msa1426700 MtrunA17_Chr3g0116701 36.943 157 92 4 25 181 80 229 4.52e-25 107
Msa1426700 MtrunA17_Chr3g0116701 30.189 212 110 9 284 477 228 419 1.25e-18 88.6
Msa1426700 MtrunA17_Chr3g0139371 36.420 162 96 4 20 181 55 209 1.78e-24 105
Msa1426700 MtrunA17_Chr3g0139371 34.483 174 87 5 318 477 238 398 3.33e-22 99.0
Msa1426700 MtrunA17_Chr3g0123491 32.911 158 99 4 25 182 79 229 1.78e-22 100
Msa1426700 MtrunA17_Chr3g0123491 28.249 177 98 5 318 479 260 422 9.04e-15 76.6
Msa1426700 MtrunA17_Chr8g0369241 37.762 143 83 3 40 181 139 276 3.86e-21 97.8
Msa1426700 MtrunA17_Chr8g0369241 29.167 240 116 7 309 500 273 506 1.45e-15 80.1
Msa1426700 MtrunA17_Chr6g0480541 31.737 167 102 4 316 478 1043 1201 9.91e-20 93.6
Msa1426700 MtrunA17_Chr6g0480541 34.459 148 88 3 38 181 896 1038 1.25e-14 77.4
Msa1426700 MtrunA17_Chr5g0437131 31.429 175 106 6 316 484 546 712 9.42e-19 90.1
Msa1426700 MtrunA17_Chr5g0437131 37.162 148 84 3 38 181 401 543 9.91e-15 77.4
Msa1426700 MtrunA17_Chr1g0210061 30.108 186 109 4 309 479 748 927 7.51e-16 81.3
Msa1426700 MtrunA17_Chr1g0210061 32.919 161 95 6 25 179 596 749 3.42e-15 79.0
Msa1426700 MtrunA17_Chr4g0045841 34.286 175 92 9 309 479 187 342 9.10e-12 67.0
Msa1426700 MtrunA17_Chr4g0030231 33.333 174 96 7 309 479 172 328 9.16e-12 67.0
Msa1426700 MtrunA17_Chr4g0065851 29.958 237 131 11 307 532 155 367 2.79e-11 66.2
Msa1426700 MtrunA17_Chr8g0348481 33.708 178 90 9 308 478 168 324 4.02e-11 64.7
Msa1426700 MtrunA17_Chr8g0387401 32.258 186 100 8 309 488 184 349 5.21e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1426700 AT3G53030.1 70.155 516 139 3 7 522 9 509 0.0 753
Msa1426700 AT5G22840.1 69.962 526 138 4 7 527 12 522 0.0 742
Msa1426700 AT3G44850.1 70.709 536 137 6 1 523 1 529 0.0 740
Msa1426700 AT4G35500.1 49.163 478 176 5 21 492 19 435 6.26e-166 478
Msa1426700 AT4G35500.2 47.182 479 185 6 21 492 19 436 1.26e-156 454
Msa1426700 AT2G17530.2 63.483 178 65 0 21 198 19 196 1.28e-78 251
Msa1426700 AT2G17530.2 47.500 160 76 2 253 404 183 342 9.54e-40 148
Msa1426700 AT2G17530.1 44.484 281 123 3 253 525 183 438 2.69e-77 250
Msa1426700 AT2G17530.1 60.417 192 73 1 21 212 19 207 3.03e-77 250
Msa1426700 AT2G17530.3 44.484 281 123 3 253 525 183 438 2.69e-77 250
Msa1426700 AT2G17530.3 60.417 192 73 1 21 212 19 207 3.03e-77 250
Msa1426700 AT4G24740.4 34.171 199 116 6 25 216 84 274 4.30e-26 109
Msa1426700 AT4G24740.3 34.171 199 116 6 25 216 84 274 5.56e-26 109
Msa1426700 AT4G24740.3 42.529 87 44 2 318 404 263 343 1.55e-14 75.5
Msa1426700 AT4G24740.7 34.171 199 116 6 25 216 46 236 8.22e-26 109
Msa1426700 AT4G24740.7 31.844 179 87 7 318 478 225 386 2.48e-17 84.3
Msa1426700 AT4G24740.1 34.171 199 116 6 25 216 84 274 1.30e-25 109
Msa1426700 AT4G24740.1 31.844 179 87 7 318 478 263 424 3.13e-17 84.7
Msa1426700 AT4G32660.2 37.037 162 95 4 20 181 52 206 1.70e-24 105
Msa1426700 AT4G32660.2 38.095 105 58 2 318 421 235 333 1.15e-14 75.9
Msa1426700 AT4G32660.3 37.037 162 95 3 20 181 44 198 2.26e-24 105
Msa1426700 AT4G32660.3 32.203 177 92 5 318 479 227 390 9.25e-18 85.9
Msa1426700 AT4G32660.1 37.037 162 95 4 20 181 52 206 2.33e-24 105
Msa1426700 AT4G32660.1 32.203 177 92 5 318 479 235 398 9.68e-18 85.9
Msa1426700 AT3G53570.1 36.943 157 92 4 25 181 101 250 1.45e-23 104
Msa1426700 AT3G53570.1 29.148 223 120 7 284 488 249 451 7.97e-19 89.7
Msa1426700 AT3G53570.4 36.943 157 92 4 25 181 101 250 1.45e-23 104
Msa1426700 AT3G53570.4 29.148 223 120 7 284 488 249 451 7.97e-19 89.7
Msa1426700 AT3G53570.2 36.943 157 92 4 25 181 101 250 1.45e-23 104
Msa1426700 AT3G53570.2 29.148 223 120 7 284 488 249 451 7.97e-19 89.7
Msa1426700 AT4G24740.5 38.411 151 86 4 46 196 1 144 1.46e-23 100
Msa1426700 AT4G24740.5 42.529 87 44 2 318 404 160 240 8.22e-15 74.7
Msa1426700 AT3G53570.3 36.943 157 92 4 25 181 87 236 1.66e-23 103
Msa1426700 AT3G53570.3 29.148 223 120 7 284 488 235 437 7.71e-19 89.7
Msa1426700 AT3G53570.5 36.943 157 92 4 25 181 87 236 1.66e-23 103
Msa1426700 AT3G53570.5 29.148 223 120 7 284 488 235 437 7.71e-19 89.7
Msa1426700 AT4G24740.6 38.411 151 86 4 46 196 1 144 3.57e-23 100
Msa1426700 AT4G24740.6 31.844 179 87 7 318 478 160 321 1.51e-17 84.3
Msa1426700 AT4G24740.9 38.411 151 86 4 46 196 1 144 3.57e-23 100
Msa1426700 AT4G24740.9 31.844 179 87 7 318 478 160 321 1.51e-17 84.3
Msa1426700 AT4G24740.2 38.411 151 86 4 46 196 1 144 3.57e-23 100
Msa1426700 AT4G24740.2 31.844 179 87 7 318 478 160 321 1.51e-17 84.3
Msa1426700 AT5G35980.1 37.584 149 87 3 40 187 122 265 2.73e-22 101
Msa1426700 AT5G35980.1 29.825 228 99 9 307 483 253 470 1.52e-14 77.4
Msa1426700 AT5G35980.3 37.584 149 87 3 40 187 87 230 3.60e-22 101
Msa1426700 AT5G35980.3 30.263 228 98 8 307 483 218 435 2.37e-14 76.6
Msa1426700 AT5G35980.2 37.584 149 87 3 40 187 122 265 5.54e-22 100
Msa1426700 AT5G35980.2 30.263 228 98 8 307 483 253 470 1.50e-14 77.4
Msa1426700 AT1G73460.2 32.584 178 106 5 307 478 992 1161 1.38e-21 99.8
Msa1426700 AT1G73460.2 33.784 148 89 3 38 181 856 998 5.13e-14 75.9
Msa1426700 AT1G73460.1 32.584 178 106 5 307 478 992 1161 1.38e-21 99.8
Msa1426700 AT1G73460.1 33.784 148 89 3 38 181 856 998 5.13e-14 75.9
Msa1426700 AT1G73450.1 32.584 178 106 5 307 478 975 1144 1.45e-21 99.8
Msa1426700 AT1G73450.1 33.784 148 89 3 38 181 839 981 6.02e-14 75.5
Msa1426700 AT2G40120.1 33.133 166 101 4 318 480 408 566 2.91e-20 94.7
Msa1426700 AT2G40120.1 33.548 155 94 3 31 181 252 401 3.32e-13 72.8
Msa1426700 AT4G24740.10 31.844 179 87 7 318 478 57 218 1.61e-18 85.1
Msa1426700 AT4G24740.8 31.844 179 87 7 318 478 57 218 1.61e-18 85.1
Msa1426700 AT4G32660.4 32.022 178 93 5 318 480 123 287 4.94e-18 85.1
Msa1426700 AT4G32660.4 38.000 100 56 2 82 181 1 94 9.82e-14 72.4
Msa1426700 AT3G17750.1 30.357 168 103 4 316 478 972 1130 1.97e-17 86.7
Msa1426700 AT3G17750.1 33.784 148 89 3 38 181 825 967 1.30e-13 74.3
Msa1426700 AT1G13350.1 33.750 160 95 5 25 179 428 581 6.56e-16 81.6
Msa1426700 AT1G13350.1 29.213 178 104 5 318 479 589 760 7.98e-15 78.2
Msa1426700 AT1G13350.2 33.750 160 95 5 25 179 455 608 8.50e-16 81.3
Msa1426700 AT1G13350.2 29.213 178 104 5 318 479 616 787 9.88e-15 77.8
Msa1426700 AT3G25840.1 32.500 160 97 5 25 179 603 756 9.05e-16 81.3
Msa1426700 AT3G25840.1 32.240 183 91 8 318 479 764 934 3.88e-15 79.3
Msa1426700 AT1G13350.3 33.750 160 95 5 25 179 501 654 1.71e-15 80.5
Msa1426700 AT1G13350.3 29.213 178 104 5 318 479 662 833 1.47e-14 77.4
Msa1426700 AT3G25840.2 32.500 160 97 5 25 179 341 494 2.91e-15 79.3
Msa1426700 AT3G25840.2 32.240 183 91 8 318 479 502 672 3.82e-15 79.0
Msa1426700 AT3G53640.1 30.899 178 101 6 318 479 470 641 4.45e-15 78.6
Msa1426700 AT3G53640.1 31.875 160 98 5 25 179 309 462 3.43e-13 72.8
Msa1426700 AT3G59790.1 31.818 176 95 8 309 479 192 347 1.90e-11 66.6
Msa1426700 AT4G11330.1 32.203 177 94 8 309 479 175 331 5.39e-11 65.1

Find 165 sgRNAs with CRISPR-Local

Find 396 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCAGTGAATGGGAAAATT+AGG 0.138672 tig0026063:+20562 None:intergenic
CTCTTGGCGGCCGCTATTCC+CGG 0.220901 tig0026063:-15986 Msa1426700:CDS
TCTTTACTTGTGGGACTATT+AGG 0.223443 tig0026063:+18719 None:intergenic
AAGTGCAAGCTTGTGGATTT+TGG 0.224760 tig0026063:-18590 Msa1426700:CDS
TTGGACCACTTTAAGCATTC+AGG 0.246674 tig0026063:-19220 Msa1426700:CDS
TGGAAATCTTTGAGTGTCTT+TGG 0.254658 tig0026063:+15624 None:intergenic
AGAAATTTGCTACCATGTTT+TGG 0.273662 tig0026063:-19092 Msa1426700:CDS
ACATTCGCCGGTTGCGGTTC+TGG 0.294454 tig0026063:-15932 Msa1426700:CDS
GGAGGCTGTGGAAGTTAGTA+TGG 0.298166 tig0026063:-15670 Msa1426700:CDS
TTTCAACTGTTTGGCTCGCT+TGG 0.308825 tig0026063:-20244 Msa1426700:CDS
GGATCTTTAGATGGATCTAT+TGG 0.324147 tig0026063:+18992 None:intergenic
AGCAATGACTTCTGAAACTA+AGG 0.331800 tig0026063:-18690 Msa1426700:CDS
CACAAGGAAGTCAGGTTTCT+AGG 0.332484 tig0026063:-18661 Msa1426700:CDS
GGGTCATACTTAAGAGGTTA+TGG 0.335126 tig0026063:-15468 Msa1426700:three_prime_UTR
CATTGATGATGGAGCTTCTC+GGG 0.335701 tig0026063:-16297 Msa1426700:CDS
ACTCCTAAAATATAACATTA+TGG 0.337974 tig0026063:+15230 None:intergenic
TTCAGTGAATGGGAAAATTA+GGG 0.339771 tig0026063:+20563 None:intergenic
TGGCATAACTCCATTGTAAT+AGG 0.342783 tig0026063:+15399 None:intergenic
CGCTTGGGATACTCTCAAAT+TGG 0.345638 tig0026063:-20228 Msa1426700:intron
TTGTTCAGAGTAAGCTTGGC+TGG 0.354810 tig0026063:-20274 Msa1426700:CDS
GTGAAACCAATTGTAGAAAA+TGG 0.359586 tig0026063:-18752 Msa1426700:CDS
TCTAAAGATCCTAGAAAATC+AGG 0.368774 tig0026063:-18980 Msa1426700:CDS
GCTGATTCATCTTTACTTGT+GGG 0.369166 tig0026063:+18710 None:intergenic
GCGGTTCTGGCCTATTACTA+AGG 0.369946 tig0026063:-15919 Msa1426700:CDS
TTACTAGAATCATCTTGTTC+AGG 0.373035 tig0026063:+18779 None:intergenic
TGAATCTATTTGAAGAATAA+TGG 0.374054 tig0026063:+20485 None:intergenic
GGATAATGAGCATCTAATCT+AGG 0.378098 tig0026063:+15251 None:intergenic
ATCCATGCTGATGCTATTAA+CGG 0.392213 tig0026063:-15729 Msa1426700:CDS
TGGTTTGAGAAACCCTTCAT+AGG 0.394006 tig0026063:-15448 Msa1426700:three_prime_UTR
AGATGTCCTGAGGTTCTTCT+AGG 0.395840 tig0026063:-18512 Msa1426700:CDS
GAAATGTGTTGTGAAGCTTT+TGG 0.397383 tig0026063:-19239 Msa1426700:CDS
GCATTGATGATGGAGCTTCT+CGG 0.398990 tig0026063:-16298 Msa1426700:CDS
TAATGGTCAGCATGTTTGTA+TGG 0.402029 tig0026063:-19194 Msa1426700:CDS
ATTTACTCTTCAGGATCATC+TGG 0.402061 tig0026063:-16320 Msa1426700:intron
TTTAAGCATTCAGGGCCTAA+TGG 0.407435 tig0026063:-19211 Msa1426700:CDS
TTCAACTGTTTGGCTCGCTT+GGG 0.408495 tig0026063:-20243 Msa1426700:CDS
TTATAAGCATTATGTGCAAA+TGG 0.411340 tig0026063:-15489 Msa1426700:three_prime_UTR
AGAATCCTCCTCTGCTGCCT+CGG 0.415247 tig0026063:+18808 None:intergenic
GAGAAAAGCCTGGAAAGTTA+AGG 0.417273 tig0026063:-15707 Msa1426700:CDS
GGATACAGTCTTGACTTTAG+TGG 0.417337 tig0026063:+18937 None:intergenic
TGAGACACATTCGCCGGTTG+CGG 0.421836 tig0026063:-15938 Msa1426700:CDS
TGCTGATTCATCTTTACTTG+TGG 0.423615 tig0026063:+18709 None:intergenic
TGGACCACTTTAAGCATTCA+GGG 0.426302 tig0026063:-19219 Msa1426700:CDS
TCTCTTGCCCTACCCTATGA+AGG 0.427728 tig0026063:+15435 None:intergenic
ATGGGGAATATGACCATTGA+TGG 0.429055 tig0026063:-15651 Msa1426700:CDS
ATTAAGCTTCAAACTAGTAT+TGG 0.429527 tig0026063:+20430 None:intergenic
GACATCTATACTGCCTAGTC+TGG 0.431990 tig0026063:+18528 None:intergenic
TCCGTCAAAACCTTAGTAAT+AGG 0.434151 tig0026063:+15909 None:intergenic
GCTTAATCCTTCGACTTCAA+TGG 0.441539 tig0026063:-20414 Msa1426700:exon
TTCTTGTAAAAGTGTGTAGA+AGG 0.444333 tig0026063:-15366 Msa1426700:three_prime_UTR
TGGTGGTGGATGAGAAAGAT+TGG 0.445967 tig0026063:+20505 None:intergenic
GGATGTTCCACAAGGAAGTC+AGG 0.451642 tig0026063:-18669 Msa1426700:CDS
TAGGGTAGGGCAAGAGAAGC+TGG 0.453382 tig0026063:-15429 Msa1426700:three_prime_UTR
TTTCCCATTCACTGAATTCG+AGG 0.463468 tig0026063:-20556 Msa1426700:five_prime_UTR
GAATCCTCCTCTGCTGCCTC+GGG 0.466324 tig0026063:+18809 None:intergenic
AGAAAAGCCTGGAAAGTTAA+GGG 0.469505 tig0026063:-15706 Msa1426700:CDS
TGTTCAGAGTAAGCTTGGCT+GGG 0.480298 tig0026063:-20273 Msa1426700:CDS
TCTTGGCGGCCGCTATTCCC+GGG 0.484079 tig0026063:-15985 Msa1426700:CDS
CTCAGTGTCTTACTCATCCA+TGG 0.484235 tig0026063:-15794 Msa1426700:CDS
TCAAGACTGTATCCAAGAAC+GGG 0.487936 tig0026063:-18928 Msa1426700:CDS
GGATCATCTGGCATTGATGA+TGG 0.488648 tig0026063:-16308 Msa1426700:CDS
ATACAAACATGCTGACCATT+AGG 0.491084 tig0026063:+19196 None:intergenic
GTAGCAAATTTCTTTGACCA+TGG 0.492513 tig0026063:+19102 None:intergenic
ATATGCTTTGAGCTTGCCAC+TGG 0.494568 tig0026063:-18446 Msa1426700:CDS
CTCTTGCCCTACCCTATGAA+GGG 0.496347 tig0026063:+15436 None:intergenic
ATTGGGTTGGAGTGAAATTG+AGG 0.498354 tig0026063:+20523 None:intergenic
TATAAGCATTATGTGCAAAT+GGG 0.501452 tig0026063:-15488 Msa1426700:three_prime_UTR
GGAAAGTCCCGAGGCAGCAG+AGG 0.502003 tig0026063:-18816 Msa1426700:CDS
GCTATTAACGGAGAAAAGCC+TGG 0.503727 tig0026063:-15717 Msa1426700:CDS
TAATAGGCCAGAACCGCAAC+CGG 0.505990 tig0026063:+15925 None:intergenic
GATAATGAGCATCTAATCTA+GGG 0.506524 tig0026063:+15252 None:intergenic
AAAACCTCGAATTCAGTGAA+TGG 0.506638 tig0026063:+20552 None:intergenic
AAACCTCGAATTCAGTGAAT+GGG 0.509572 tig0026063:+20553 None:intergenic
TATGTTGTTCAGAGTAAGCT+TGG 0.509816 tig0026063:-20278 Msa1426700:CDS
TTGGGTTGGAGTGAAATTGA+GGG 0.513437 tig0026063:+20524 None:intergenic
GCAAATGGGTCATACTTAAG+AGG 0.513458 tig0026063:-15474 Msa1426700:three_prime_UTR
TTTGTTCAGATTGCTCTTGG+CGG 0.517367 tig0026063:-15999 Msa1426700:intron
AAAGAACGAGCAGGAGGCTG+TGG 0.520764 tig0026063:-15682 Msa1426700:CDS
AATTTCTTTGACCATGGGAA+GGG 0.522927 tig0026063:+19108 None:intergenic
GGTTATCATGCGGTTCAGAT+TGG 0.523054 tig0026063:-20323 Msa1426700:CDS
TGTCTTTGGAGTTCCATCAA+TGG 0.524200 tig0026063:+15638 None:intergenic
GAGAAACCCTTCATAGGGTA+GGG 0.526215 tig0026063:-15442 Msa1426700:three_prime_UTR
TTAGTGGTTGGAAGTATAAG+TGG 0.528613 tig0026063:+18953 None:intergenic
ATTTCTTTGACCATGGGAAG+GGG 0.529053 tig0026063:+19109 None:intergenic
GCACTACACGGAAGCGGCAA+TGG 0.529430 tig0026063:-19311 Msa1426700:CDS
TCTCAAACAAATTGCTGAAG+GGG 0.530198 tig0026063:-19275 Msa1426700:CDS
AAGTCCCGAGGCAGCAGAGG+AGG 0.531648 tig0026063:-18813 Msa1426700:CDS
CGAGGACCTGCACTCATCCA+TGG 0.534400 tig0026063:+15777 None:intergenic
GTTCAGAGTAAGCTTGGCTG+GGG 0.535588 tig0026063:-20272 Msa1426700:CDS
CAAAGTCAAGTAACGGAACA+AGG 0.536228 tig0026063:+15841 None:intergenic
ATTCTCAAACAAATTGCTGA+AGG 0.536936 tig0026063:-19277 Msa1426700:CDS
CATGGATGAGTGCAGGTCCT+CGG 0.537891 tig0026063:-15776 Msa1426700:CDS
ACAGTGGTGAAAACTATGAC+AGG 0.544366 tig0026063:-18403 Msa1426700:CDS
GGTTTGAGAAACCCTTCATA+GGG 0.544952 tig0026063:-15447 Msa1426700:three_prime_UTR
TTGGAGTGAAATTGAGGGAA+AGG 0.545619 tig0026063:+20529 None:intergenic
TGAGAAACCCTTCATAGGGT+AGG 0.545723 tig0026063:-15443 Msa1426700:three_prime_UTR
ACTCGACTCCGGCAGATATG+TGG 0.548164 tig0026063:-18481 Msa1426700:CDS
TCCTTCGACTTCAATGGCGG+AGG 0.550311 tig0026063:-20408 Msa1426700:exon
TGGATGGAAGCCTATTACAA+TGG 0.552235 tig0026063:-15409 Msa1426700:three_prime_UTR
AAACATGATAAAAGTTCGAA+TGG 0.554779 tig0026063:-18899 Msa1426700:CDS
CTCCGTTAATAGCATCAGCA+TGG 0.557184 tig0026063:+15727 None:intergenic
TTAGAACCTAGAAGAACCTC+AGG 0.563105 tig0026063:+18506 None:intergenic
TTCTCAAACAAATTGCTGAA+GGG 0.564427 tig0026063:-19276 Msa1426700:CDS
TGCTCAGCACTACACGGAAG+CGG 0.566332 tig0026063:-19317 Msa1426700:CDS
ACTCATCCATGGATGAGTGC+AGG 0.567258 tig0026063:-15783 Msa1426700:CDS
AAATTTCTTTGACCATGGGA+AGG 0.567519 tig0026063:+19107 None:intergenic
GTCAAGACTGTATCCAAGAA+CGG 0.569523 tig0026063:-18929 Msa1426700:CDS
GTGGATGAGAAAGATTGGGT+TGG 0.570002 tig0026063:+20510 None:intergenic
GTGTAAGAAGATTGTCCCCA+AGG 0.570530 tig0026063:+19161 None:intergenic
GTTAAGGGAAAAGAACGAGC+AGG 0.570911 tig0026063:-15691 Msa1426700:CDS
TAGCAAATTTCTTTGACCAT+GGG 0.571005 tig0026063:+19103 None:intergenic
CCTAATATGCCTACCTTGCG+AGG 0.572307 tig0026063:+16268 None:intergenic
GCAAAGGACCACATATCTGC+CGG 0.573521 tig0026063:+18473 None:intergenic
GAGGCTGTGGAAGTTAGTAT+GGG 0.573693 tig0026063:-15669 Msa1426700:CDS
GGTGGTGGATGAGAAAGATT+GGG 0.576553 tig0026063:+20506 None:intergenic
TCGTGGTATTCCCCTTCCCA+TGG 0.577077 tig0026063:-19119 Msa1426700:CDS
TTTACAAGAAGTGAAAGAAG+TGG 0.578789 tig0026063:+15379 None:intergenic
ACAGTCTTGACTTTAGTGGT+TGG 0.580495 tig0026063:+18941 None:intergenic
CTCAAAGCATATGCAAGCAA+AGG 0.581090 tig0026063:+18457 None:intergenic
GATTACAGTTCGGAAGATGA+AGG 0.582493 tig0026063:-20368 Msa1426700:CDS
TCAGGAACAAAGTCAAGTAA+CGG 0.586688 tig0026063:+15834 None:intergenic
AGATGCGAGTGATTACAGTT+CGG 0.587171 tig0026063:-20378 Msa1426700:CDS
GCATGGATGCTATTCACTGA+GGG 0.587196 tig0026063:+15744 None:intergenic
GTGATTTGAGACACATTCGC+CGG 0.588620 tig0026063:-15944 Msa1426700:CDS
TGATCTTAAGTGCAAGCTTG+TGG 0.588631 tig0026063:-18597 Msa1426700:CDS
GTAGGGCAAGAGAAGCTGGA+TGG 0.592297 tig0026063:-15425 Msa1426700:three_prime_UTR
TTAAGAAACAAAAGATGTAA+CGG 0.596342 tig0026063:+15136 None:intergenic
TCTCGGGGTGATGCCTCGCA+AGG 0.596451 tig0026063:-16281 Msa1426700:intron
AATTGCTGAAGGGGATCTAG+AGG 0.602637 tig0026063:-19266 Msa1426700:CDS
CCATCGGCGTAGCTGCACAT+TGG 0.604550 tig0026063:-15591 Msa1426700:exon
GGAAGTCAGGTTTCTAGGAG+AGG 0.605679 tig0026063:-18656 Msa1426700:CDS
TAGGCCCTGAATGCTTAAAG+TGG 0.607415 tig0026063:+19215 None:intergenic
CCAATGTGCAGCTACGCCGA+TGG 0.609488 tig0026063:+15591 None:intergenic
TATTTGAAGAATAATGGTGG+TGG 0.615793 tig0026063:+20491 None:intergenic
TAGTGGTTGGAAGTATAAGT+GGG 0.617001 tig0026063:+18954 None:intergenic
TCCTCCGCCATTGAAGTCGA+AGG 0.617006 tig0026063:+20407 None:intergenic
GTAAGACACTGAGCGGCCGT+TGG 0.620524 tig0026063:+15804 None:intergenic
TGAAAACTATGACAGGGATG+AGG 0.621612 tig0026063:-18396 Msa1426700:intron
CCAATTGTAGAAAATGGTGA+AGG 0.622581 tig0026063:-18746 Msa1426700:CDS
TTTCCAATCTACAAAACCAT+CGG 0.628317 tig0026063:-15607 Msa1426700:CDS
CTAGAAACCTGACTTCCTTG+TGG 0.628911 tig0026063:+18662 None:intergenic
AATCCAAACCCACCAAAACA+TGG 0.629227 tig0026063:+19080 None:intergenic
AGGTTCTAAATACTCGACTC+CGG 0.631900 tig0026063:-18492 Msa1426700:CDS
TAATCCTTCGACTTCAATGG+CGG 0.636314 tig0026063:-20411 Msa1426700:exon
ACATTGAACATCATGCTCCA+AGG 0.639562 tig0026063:+15522 None:intergenic
AAGGGAAAAGAACGAGCAGG+AGG 0.644457 tig0026063:-15688 Msa1426700:CDS
AGCTCAGAAGGAAAGTCCCG+AGG 0.651825 tig0026063:-18825 Msa1426700:CDS
GTGCACTCTATTGAGTGTGA+AGG 0.658270 tig0026063:+15337 None:intergenic
ATCTATTTGAAGAATAATGG+TGG 0.661720 tig0026063:+20488 None:intergenic
TGTTCCTGAAAAGAGACCAA+CGG 0.664722 tig0026063:-15820 Msa1426700:CDS
GAAGAGTGCTCAGCACTACA+CGG 0.666377 tig0026063:-19323 Msa1426700:CDS
CAAACGAGGTGGTTATCATG+CGG 0.669550 tig0026063:-20333 Msa1426700:CDS
ATTGATGATGGAGCTTCTCG+GGG 0.671822 tig0026063:-16296 Msa1426700:CDS
ACTGAGGGCTCAAGAGTCCG+AGG 0.672144 tig0026063:+15759 None:intergenic
TTCGGAAGATGAAGGAACTG+AGG 0.673927 tig0026063:-20360 Msa1426700:CDS
CAGTGGTGAAAACTATGACA+GGG 0.675870 tig0026063:-18402 Msa1426700:CDS
ATCAAGTATAGTGATTATCG+TGG 0.676361 tig0026063:-19136 Msa1426700:CDS
GAAACTAAGGATGTTCCACA+AGG 0.679404 tig0026063:-18677 Msa1426700:CDS
TTACAAATGATATCCAGACT+AGG 0.679700 tig0026063:-18541 Msa1426700:CDS
AGGCTGTGGAAGTTAGTATG+GGG 0.683437 tig0026063:-15668 Msa1426700:CDS
AGCATGGATGCTATTCACTG+AGG 0.694541 tig0026063:+15743 None:intergenic
TAGGCAGTATAGATGTCCTG+AGG 0.713543 tig0026063:-18522 Msa1426700:CDS
GGAACTGAGGATTACAAACG+AGG 0.716479 tig0026063:-20347 Msa1426700:CDS
ACTGAGGATTACAAACGAGG+TGG 0.729665 tig0026063:-20344 Msa1426700:CDS
TGGATGAGTAAGACACTGAG+CGG 0.731118 tig0026063:+15797 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAACTTGAAATTTGAAAT+AGG + tig0026063:15305-15324 None:intergenic 15.0%
!! ATAAATCAAAACAATGAAAA+GGG + tig0026063:15567-15586 None:intergenic 15.0%
!! AATAAATCAAAACAATGAAA+AGG + tig0026063:15568-15587 None:intergenic 15.0%
!!! TTTTCATTGTTTTGATTTAT+TGG - tig0026063:15567-15586 Msa1426700:three_prime_UTR 15.0%
!!! TGAACTTCAAAATAAATTTT+TGG - tig0026063:17400-17419 Msa1426700:intron 15.0%
!! AAAAATAAGAAACATTTAGA+GGG - tig0026063:17487-17506 Msa1426700:intron 15.0%
!!! AAAAAATACTACTTTTAACT+TGG - tig0026063:18197-18216 Msa1426700:intron 15.0%
!!! TACTTTTCGTTTTTAAATTA+CGG + tig0026063:18839-18858 None:intergenic 15.0%
!!! TTCAATTATTTCTAAGTTAT+TGG - tig0026063:19286-19305 Msa1426700:CDS 15.0%
!!! TCAATTATTTCTAAGTTATT+GGG - tig0026063:19287-19306 Msa1426700:CDS 15.0%
!!! GAGAATATTTTATTGTTTTT+TGG - tig0026063:20470-20489 Msa1426700:five_prime_UTR 15.0%
!!! TATCCATAATGTTATATTTT+AGG - tig0026063:20530-20549 Msa1426700:five_prime_UTR 15.0%
!! TGAATCTATTTGAAGAATAA+TGG + tig0026063:15281-15300 None:intergenic 20.0%
!! TAAATCAAAACAATGAAAAG+GGG + tig0026063:15566-15585 None:intergenic 20.0%
!!! ATTATTGAGTTTAGTGTTTT+TGG - tig0026063:15625-15644 Msa1426700:CDS 20.0%
!!! TTATTGAGTTTAGTGTTTTT+GGG - tig0026063:15626-15645 Msa1426700:CDS 20.0%
!! GTCAAATTGAAACTAATATA+AGG - tig0026063:15776-15795 Msa1426700:CDS 20.0%
!! TTGAAACTAATATAAGGATT+AGG - tig0026063:15782-15801 Msa1426700:CDS 20.0%
!! TCATATATATTGTGTGTTAT+TGG - tig0026063:16274-16293 Msa1426700:intron 20.0%
!!! TTTATTTTGAAGTTCAAAAC+AGG + tig0026063:17396-17415 None:intergenic 20.0%
!! TTGTTTATATATGTTGTCTT+AGG - tig0026063:17448-17467 Msa1426700:intron 20.0%
!! GAAAAATAAGAAACATTTAG+AGG - tig0026063:17486-17505 Msa1426700:intron 20.0%
!!! ACATTTGTTTGTTAAAAAGT+TGG - tig0026063:17511-17530 Msa1426700:intron 20.0%
!!! AATTCTAAGACAAACTATTT+TGG + tig0026063:17568-17587 None:intergenic 20.0%
!!! AAATAGTTTGTCTTAGAATT+TGG - tig0026063:17568-17587 Msa1426700:intron 20.0%
!!! AATAGTTTGTCTTAGAATTT+GGG - tig0026063:17569-17588 Msa1426700:intron 20.0%
!! CTAAAAATATGTCTATAAGT+GGG + tig0026063:17642-17661 None:intergenic 20.0%
!! AAGTTATTAGTAAAAAAACG+TGG + tig0026063:18159-18178 None:intergenic 20.0%
!!! ATAAAGTGAAGACATTTTTT+AGG - tig0026063:18273-18292 Msa1426700:intron 20.0%
!! ATTATATAAACAAACTGACT+AGG - tig0026063:18306-18325 Msa1426700:intron 20.0%
!! CTTTATAACTCAATATATCT+AGG - tig0026063:18699-18718 Msa1426700:CDS 20.0%
!!! GCCTATACTTTTTTTTTATT+GGG - tig0026063:19231-19250 Msa1426700:CDS 20.0%
!!! CCTATACTTTTTTTTTATTG+GGG - tig0026063:19232-19251 Msa1426700:CDS 20.0%
!!! CTATACTTTTTTTTTATTGG+GGG - tig0026063:19233-19252 Msa1426700:CDS 20.0%
!!! CAATTATTTCTAAGTTATTG+GGG - tig0026063:19288-19307 Msa1426700:CDS 20.0%
!!! AATTATTTCTAAGTTATTGG+GGG - tig0026063:19289-19308 Msa1426700:CDS 20.0%
!!! ATCAATATGCAATATTTCTA+AGG + tig0026063:19330-19349 None:intergenic 20.0%
!!! GATTTTAAAATTTACTCTTC+AGG - tig0026063:19434-19453 Msa1426700:intron 20.0%
!! AGGATAATATGTATCTATAA+TGG + tig0026063:19638-19657 None:intergenic 20.0%
!!! AAATAATTGTTCAAGTTTTG+AGG + tig0026063:19746-19765 None:intergenic 20.0%
!!! TTTTATATGGTAAGTTTTGA+TGG - tig0026063:20217-20236 Msa1426700:intron 20.0%
!! ACTCCTAAAATATAACATTA+TGG + tig0026063:20536-20555 None:intergenic 20.0%
! ATCTATTTGAAGAATAATGG+TGG + tig0026063:15278-15297 None:intergenic 25.0%
! ATTAAGCTTCAAACTAGTAT+TGG + tig0026063:15336-15355 None:intergenic 25.0%
!!! ATGCTTTTTCTTGTTTTCTA+TGG - tig0026063:15698-15717 Msa1426700:CDS 25.0%
! TCGAAACATGTAATAATTTG+AGG - tig0026063:15866-15885 Msa1426700:CDS 25.0%
! TTTAATGTAACTACAAGTCT+CGG - tig0026063:15900-15919 Msa1426700:CDS 25.0%
! TCTCAAATTATTAGCTATGT+CGG + tig0026063:16036-16055 None:intergenic 25.0%
! ATTGAAAACTCTACTAACAA+TGG - tig0026063:16376-16395 Msa1426700:intron 25.0%
! TTGAAAACTCTACTAACAAT+GGG - tig0026063:16377-16396 Msa1426700:intron 25.0%
! AAACATGATAAAAGTTCGAA+TGG - tig0026063:16864-16883 Msa1426700:intron 25.0%
! GGTAAAATTGATAAGTTATG+TGG - tig0026063:17542-17561 Msa1426700:intron 25.0%
!! ATAGTTTGTCTTAGAATTTG+GGG - tig0026063:17570-17589 Msa1426700:intron 25.0%
! CTAACTTAAAACTACAAAAC+CGG - tig0026063:17595-17614 Msa1426700:intron 25.0%
! CCTAAAAATATGTCTATAAG+TGG + tig0026063:17643-17662 None:intergenic 25.0%
!! CCACTTATAGACATATTTTT+AGG - tig0026063:17640-17659 Msa1426700:intron 25.0%
!!! TCTGATACCATTTTAGAATT+TGG - tig0026063:17774-17793 Msa1426700:intron 25.0%
!!! CTGATACCATTTTAGAATTT+GGG - tig0026063:17775-17794 Msa1426700:intron 25.0%
!! ACTAGTTTGAGATATTAGTA+AGG - tig0026063:17803-17822 Msa1426700:intron 25.0%
!! TTTTTGATCTAGTAAACATG+AGG - tig0026063:17847-17866 Msa1426700:intron 25.0%
!! TTTTGATCTAGTAAACATGA+GGG - tig0026063:17848-17867 Msa1426700:intron 25.0%
! AATCTAAACACAGTGAATTT+AGG + tig0026063:17934-17953 None:intergenic 25.0%
!!! TTCATGCTTTTGAGTTATAT+AGG - tig0026063:17989-18008 Msa1426700:intron 25.0%
!! CATAAGATACTTTTCCAAAA+GGG + tig0026063:18069-18088 None:intergenic 25.0%
!!! TTGAACTTGTTTTTGTTTCT+TGG - tig0026063:18346-18365 Msa1426700:intron 25.0%
! AAATTTACTAAAACTCAGAC+TGG + tig0026063:18440-18459 None:intergenic 25.0%
!! GTAAATTTTCACAATCTTTC+TGG - tig0026063:18452-18471 Msa1426700:CDS 25.0%
!!! AGATTGAGTTATTTTAGAAG+AGG - tig0026063:18533-18552 Msa1426700:CDS 25.0%
!! ACTGTGTATTTCATTTTACA+TGG + tig0026063:18738-18757 None:intergenic 25.0%
! GTACTCAAAAAACATACAAT+CGG + tig0026063:18778-18797 None:intergenic 25.0%
!!! GGCCTATACTTTTTTTTTAT+TGG - tig0026063:19230-19249 Msa1426700:CDS 25.0%
!! CCCCAATAAAAAAAAAGTAT+AGG + tig0026063:19235-19254 None:intergenic 25.0%
! GAAATAATTGAACTGTACAA+TGG + tig0026063:19278-19297 None:intergenic 25.0%
!! GCAATATTTCTAAGGAAATA+AGG + tig0026063:19322-19341 None:intergenic 25.0%
! CTTACCATATAAAAAGTAAC+AGG + tig0026063:20211-20230 None:intergenic 25.0%
! TTATAAGCATTATGTGCAAA+TGG - tig0026063:20274-20293 Msa1426700:CDS 25.0%
! TATAAGCATTATGTGCAAAT+GGG - tig0026063:20275-20294 Msa1426700:CDS 25.0%
!!! TTTTTGAGTTGTGTTTGGTT+TGG + tig0026063:15180-15199 None:intergenic 30.0%
TTCAGTGAATGGGAAAATTA+GGG + tig0026063:15203-15222 None:intergenic 30.0%
ATTCAGTGAATGGGAAAATT+AGG + tig0026063:15204-15223 None:intergenic 30.0%
TATTTGAAGAATAATGGTGG+TGG + tig0026063:15275-15294 None:intergenic 30.0%
! ATTGGTGACACTTTCAAAAA+TGG - tig0026063:15458-15477 Msa1426700:three_prime_UTR 30.0%
! TTGGTGACACTTTCAAAAAT+GGG - tig0026063:15459-15478 Msa1426700:three_prime_UTR 30.0%
!!! TTAGTGTTTTTGGGTTATGA+AGG - tig0026063:15635-15654 Msa1426700:CDS 30.0%
!!! TAGTGTTTTTGGGTTATGAA+GGG - tig0026063:15636-15655 Msa1426700:CDS 30.0%
TTCAGTGTAATTACAAGTGT+CGG - tig0026063:16067-16086 Msa1426700:intron 30.0%
GAAACTAGAAAGAGAATCAA+GGG + tig0026063:16242-16261 None:intergenic 30.0%
AGAAACTAGAAAGAGAATCA+AGG + tig0026063:16243-16262 None:intergenic 30.0%
!! CTCTTTCTAGTTTCTTTAGT+TGG - tig0026063:16248-16267 Msa1426700:intron 30.0%
!! TTTCTAGTTTCTTTAGTTGG+TGG - tig0026063:16251-16270 Msa1426700:intron 30.0%
! GTTATTGGAGTTCTTTTCAT+TGG - tig0026063:16289-16308 Msa1426700:CDS 30.0%
TGAAAACTCTACTAACAATG+GGG - tig0026063:16378-16397 Msa1426700:intron 30.0%
! AGCACTCTTCTGAATTTTTA+AGG + tig0026063:16430-16449 None:intergenic 30.0%
ATTCTCAAACAAATTGCTGA+AGG - tig0026063:16486-16505 Msa1426700:intron 30.0%
TTCTCAAACAAATTGCTGAA+GGG - tig0026063:16487-16506 Msa1426700:intron 30.0%
! TGTATGGTTTTTGAATTCCT+TGG - tig0026063:16585-16604 Msa1426700:intron 30.0%
! GTATGGTTTTTGAATTCCTT+GGG - tig0026063:16586-16605 Msa1426700:intron 30.0%
! TATGGTTTTTGAATTCCTTG+GGG - tig0026063:16587-16606 Msa1426700:intron 30.0%
ATCAAGTATAGTGATTATCG+TGG - tig0026063:16627-16646 Msa1426700:intron 30.0%
TAGCAAATTTCTTTGACCAT+GGG + tig0026063:16663-16682 None:intergenic 30.0%
!!! AGAAATTTGCTACCATGTTT+TGG - tig0026063:16671-16690 Msa1426700:intron 30.0%
!!! GATTTTCTAGGATCTTTAGA+TGG + tig0026063:16783-16802 None:intergenic 30.0%
TCTAAAGATCCTAGAAAATC+AGG - tig0026063:16783-16802 Msa1426700:intron 30.0%
! CGAACTTTTATCATGTTTTG+TGG + tig0026063:16862-16881 None:intergenic 30.0%
TTACTAGAATCATCTTGTTC+AGG + tig0026063:16987-17006 None:intergenic 30.0%
GTGAAACCAATTGTAGAAAA+TGG - tig0026063:17011-17030 Msa1426700:intron 30.0%
TTACAAATGATATCCAGACT+AGG - tig0026063:17222-17241 Msa1426700:intron 30.0%
GTTAAAAAGTTGGATCAAGT+TGG - tig0026063:17521-17540 Msa1426700:intron 30.0%
!!! CGGTTTTGTAGTTTTAAGTT+AGG + tig0026063:17597-17616 None:intergenic 30.0%
!!! ACCATTTTAGAATTTGGGTT+AGG - tig0026063:17780-17799 Msa1426700:intron 30.0%
! TCCTAACCCAAATTCTAAAA+TGG + tig0026063:17784-17803 None:intergenic 30.0%
GTTTACTAGATCAAAAAGCA+AGG + tig0026063:17844-17863 None:intergenic 30.0%
! ATTTCTATCTTTTGCCCTTT+TGG - tig0026063:18052-18071 Msa1426700:intron 30.0%
! CCATAAGATACTTTTCCAAA+AGG + tig0026063:18070-18089 None:intergenic 30.0%
!!! CCTTTTGGAAAAGTATCTTA+TGG - tig0026063:18067-18086 Msa1426700:intron 30.0%
AACACAAGACAATTTCTGAT+TGG + tig0026063:18121-18140 None:intergenic 30.0%
CAGAAATTGTCTTGTGTTAA+TGG - tig0026063:18123-18142 Msa1426700:intron 30.0%
GGTCATTGTGATTTAATCTA+TGG - tig0026063:18218-18237 Msa1426700:intron 30.0%
! TGAAAAGCGAAAAGTTTTCA+TGG + tig0026063:18581-18600 None:intergenic 30.0%
! ATTTCATTTTACATGGCAGA+AGG + tig0026063:18731-18750 None:intergenic 30.0%
CTCTCAATATTATCAAGATC+TGG - tig0026063:19209-19228 Msa1426700:CDS 30.0%
! TGTATTTCAGACTTTTCAGT+GGG + tig0026063:19369-19388 None:intergenic 30.0%
GGAGTAACTGAATAATATGT+GGG + tig0026063:19617-19636 None:intergenic 30.0%
TGGAGTAACTGAATAATATG+TGG + tig0026063:19618-19637 None:intergenic 30.0%
AGAAAGAGAGTAGATACAAT+AGG + tig0026063:19665-19684 None:intergenic 30.0%
! TATTTTGTTCAGATTGCTCT+TGG - tig0026063:19761-19780 Msa1426700:intron 30.0%
TTTCCAATCTACAAAACCAT+CGG - tig0026063:20156-20175 Msa1426700:intron 30.0%
!!! GCAACCTGTTACTTTTTATA+TGG - tig0026063:20204-20223 Msa1426700:intron 30.0%
TTTACAAGAAGTGAAAGAAG+TGG + tig0026063:20387-20406 None:intergenic 30.0%
! TTCTTGTAAAAGTGTGTAGA+AGG - tig0026063:20397-20416 Msa1426700:CDS 30.0%
GATAATGAGCATCTAATCTA+GGG + tig0026063:20514-20533 None:intergenic 30.0%
!!! TTGTTGTTTTTGTTGTTGCC+GGG + tig0026063:15154-15173 None:intergenic 35.0%
!!! CTTGTTGTTTTTGTTGTTGC+CGG + tig0026063:15155-15174 None:intergenic 35.0%
!!! TAGGGTTTTTGAGTTGTGTT+TGG + tig0026063:15185-15204 None:intergenic 35.0%
AAACCTCGAATTCAGTGAAT+GGG + tig0026063:15213-15232 None:intergenic 35.0%
AAAACCTCGAATTCAGTGAA+TGG + tig0026063:15214-15233 None:intergenic 35.0%
TATGTTGTTCAGAGTAAGCT+TGG - tig0026063:15485-15504 Msa1426700:three_prime_UTR 35.0%
TAGGTTGTGTGTGTTTAGTT+TGG - tig0026063:16174-16193 Msa1426700:intron 35.0%
! ACTATGTTTGTTGAAAGCCT+AGG - tig0026063:16330-16349 Msa1426700:intron 35.0%
TCTCAAACAAATTGCTGAAG+GGG - tig0026063:16488-16507 Msa1426700:intron 35.0%
! GAAATGTGTTGTGAAGCTTT+TGG - tig0026063:16524-16543 Msa1426700:intron 35.0%
ATACAAACATGCTGACCATT+AGG + tig0026063:16570-16589 None:intergenic 35.0%
TAATGGTCAGCATGTTTGTA+TGG - tig0026063:16569-16588 Msa1426700:intron 35.0%
AATTTCTTTGACCATGGGAA+GGG + tig0026063:16658-16677 None:intergenic 35.0%
AAATTTCTTTGACCATGGGA+AGG + tig0026063:16659-16678 None:intergenic 35.0%
GTAGCAAATTTCTTTGACCA+TGG + tig0026063:16664-16683 None:intergenic 35.0%
!!! AATTTGCTACCATGTTTTGG+TGG - tig0026063:16674-16693 Msa1426700:intron 35.0%
!!! ATTTGCTACCATGTTTTGGT+GGG - tig0026063:16675-16694 Msa1426700:intron 35.0%
! GAGACAAGCAAAACATTTTC+TGG + tig0026063:16750-16769 None:intergenic 35.0%
GGATCTTTAGATGGATCTAT+TGG + tig0026063:16774-16793 None:intergenic 35.0%
! TAGTGGTTGGAAGTATAAGT+GGG + tig0026063:16812-16831 None:intergenic 35.0%
! TTAGTGGTTGGAAGTATAAG+TGG + tig0026063:16813-16832 None:intergenic 35.0%
!!! CATCTTCTTTTTCTGGTTCT+TGG + tig0026063:16898-16917 None:intergenic 35.0%
AGAACCAGAAAAAGAAGATG+CGG - tig0026063:16898-16917 Msa1426700:intron 35.0%
! TTTTCCGCATCTTCTTTTTC+TGG + tig0026063:16905-16924 None:intergenic 35.0%
GAAAAAGAAGATGCGGAAAA+AGG - tig0026063:16905-16924 Msa1426700:intron 35.0%
! CCTTCACCATTTTCTACAAT+TGG + tig0026063:17020-17039 None:intergenic 35.0%
CCAATTGTAGAAAATGGTGA+AGG - tig0026063:17017-17036 Msa1426700:intron 35.0%
TCTTTACTTGTGGGACTATT+AGG + tig0026063:17047-17066 None:intergenic 35.0%
! GCTGATTCATCTTTACTTGT+GGG + tig0026063:17056-17075 None:intergenic 35.0%
!! TGCTGATTCATCTTTACTTG+TGG + tig0026063:17057-17076 None:intergenic 35.0%
!! AGCAATGACTTCTGAAACTA+AGG - tig0026063:17073-17092 Msa1426700:intron 35.0%
!! TGGATTTTGGAAATGCTTGT+TGG - tig0026063:17186-17205 Msa1426700:intron 35.0%
GAGATATTAGTAAGGACGTT+AGG - tig0026063:17811-17830 Msa1426700:intron 35.0%
! AAACATGAGGGAAGTTTTTG+TGG - tig0026063:17860-17879 Msa1426700:intron 35.0%
! TGGAAGCTATTTGACTTTGA+TGG - tig0026063:17896-17915 Msa1426700:intron 35.0%
! GGAAGCTATTTGACTTTGAT+GGG - tig0026063:17897-17916 Msa1426700:intron 35.0%
TGGAATATTATGAGCGTGTT+TGG - tig0026063:18366-18385 Msa1426700:intron 35.0%
ATATTATGAGCGTGTTTGGA+AGG - tig0026063:18370-18389 Msa1426700:intron 35.0%
TATTATGAGCGTGTTTGGAA+GGG - tig0026063:18371-18390 Msa1426700:intron 35.0%
AACTCAATATATCTAGGCAG+AGG - tig0026063:18705-18724 Msa1426700:CDS 35.0%
AGTAGTATAGGGAAGTCTAA+GGG + tig0026063:18906-18925 None:intergenic 35.0%
ACCACGATAAAGTTCGTTAT+AGG - tig0026063:18934-18953 Msa1426700:CDS 35.0%
ACCTATAACGAACTTTATCG+TGG + tig0026063:18938-18957 None:intergenic 35.0%
! ACATGCTTACGTAGCAATTT+TGG - tig0026063:19107-19126 Msa1426700:CDS 35.0%
! CATGCTTACGTAGCAATTTT+GGG - tig0026063:19108-19127 Msa1426700:CDS 35.0%
! ATGCTTACGTAGCAATTTTG+GGG - tig0026063:19109-19128 Msa1426700:CDS 35.0%
! TCTAGAGTAAACCACCAAAT+TGG - tig0026063:19167-19186 Msa1426700:CDS 35.0%
TACAAAGACATGGACCAATT+TGG + tig0026063:19184-19203 None:intergenic 35.0%
GAGAGTGAATTACAAAGACA+TGG + tig0026063:19194-19213 None:intergenic 35.0%
! CTGTATTTCAGACTTTTCAG+TGG + tig0026063:19370-19389 None:intergenic 35.0%
! AAAAGTCTGAAATACAGCTG+TGG - tig0026063:19373-19392 Msa1426700:intron 35.0%
ATTTACTCTTCAGGATCATC+TGG - tig0026063:19443-19462 Msa1426700:intron 35.0%
TTTGCATGTTGATATGCACA+AGG - tig0026063:19556-19575 Msa1426700:intron 35.0%
GAGTAGATACAATAGGATCA+AGG + tig0026063:19658-19677 None:intergenic 35.0%
AGATCTATTGAAAAAGTCCC+GGG + tig0026063:19798-19817 None:intergenic 35.0%
CAGATCTATTGAAAAAGTCC+CGG + tig0026063:19799-19818 None:intergenic 35.0%
!! GCCTATTACTAAGGTTTTGA+CGG - tig0026063:19853-19872 Msa1426700:intron 35.0%
TCCGTCAAAACCTTAGTAAT+AGG + tig0026063:19857-19876 None:intergenic 35.0%
TCAGGAACAAAGTCAAGTAA+CGG + tig0026063:19932-19951 None:intergenic 35.0%
ATCCATGCTGATGCTATTAA+CGG - tig0026063:20034-20053 Msa1426700:intron 35.0%
AGAAAAGCCTGGAAAGTTAA+GGG - tig0026063:20057-20076 Msa1426700:intron 35.0%
! TTCTTTTCCCTTAACTTTCC+AGG + tig0026063:20067-20086 None:intergenic 35.0%
TGGAAATCTTTGAGTGTCTT+TGG + tig0026063:20142-20161 None:intergenic 35.0%
TGGCATAACTCCATTGTAAT+AGG + tig0026063:20367-20386 None:intergenic 35.0%
GGATAATGAGCATCTAATCT+AGG + tig0026063:20515-20534 None:intergenic 35.0%
TTTCCCATTCACTGAATTCG+AGG - tig0026063:15207-15226 Msa1426700:three_prime_UTR 40.0%
TTGGAGTGAAATTGAGGGAA+AGG + tig0026063:15237-15256 None:intergenic 40.0%
!! TTGGGTTGGAGTGAAATTGA+GGG + tig0026063:15242-15261 None:intergenic 40.0%
!! ATTGGGTTGGAGTGAAATTG+AGG + tig0026063:15243-15262 None:intergenic 40.0%
GCTTAATCCTTCGACTTCAA+TGG - tig0026063:15349-15368 Msa1426700:three_prime_UTR 40.0%
TAATCCTTCGACTTCAATGG+CGG - tig0026063:15352-15371 Msa1426700:three_prime_UTR 40.0%
AGATGCGAGTGATTACAGTT+CGG - tig0026063:15385-15404 Msa1426700:three_prime_UTR 40.0%
GATTACAGTTCGGAAGATGA+AGG - tig0026063:15395-15414 Msa1426700:three_prime_UTR 40.0%
!!! GGGGTCATTTTTCAACTGTT+TGG - tig0026063:15510-15529 Msa1426700:three_prime_UTR 40.0%
ATTTACACGGACACCAGATA+TGG - tig0026063:15833-15852 Msa1426700:CDS 40.0%
TATGTAGCACCAATGAAGCA+CGG + tig0026063:16156-16175 None:intergenic 40.0%
TTGGACCACTTTAAGCATTC+AGG - tig0026063:16543-16562 Msa1426700:intron 40.0%
TGGACCACTTTAAGCATTCA+GGG - tig0026063:16544-16563 Msa1426700:intron 40.0%
TTTAAGCATTCAGGGCCTAA+TGG - tig0026063:16552-16571 Msa1426700:intron 40.0%
ATTTCTTTGACCATGGGAAG+GGG + tig0026063:16657-16676 None:intergenic 40.0%
AATCCAAACCCACCAAAACA+TGG + tig0026063:16686-16705 None:intergenic 40.0%
ACAGTCTTGACTTTAGTGGT+TGG + tig0026063:16825-16844 None:intergenic 40.0%
GGATACAGTCTTGACTTTAG+TGG + tig0026063:16829-16848 None:intergenic 40.0%
GTCAAGACTGTATCCAAGAA+CGG - tig0026063:16834-16853 Msa1426700:intron 40.0%
TCAAGACTGTATCCAAGAAC+GGG - tig0026063:16835-16854 Msa1426700:intron 40.0%
GAAACTAAGGATGTTCCACA+AGG - tig0026063:17086-17105 Msa1426700:intron 40.0%
TGATCTTAAGTGCAAGCTTG+TGG - tig0026063:17166-17185 Msa1426700:intron 40.0%
! AAGTGCAAGCTTGTGGATTT+TGG - tig0026063:17173-17192 Msa1426700:intron 40.0%
TTAGAACCTAGAAGAACCTC+AGG + tig0026063:17260-17279 None:intergenic 40.0%
!! AGGTTCTAAATACTCGACTC+CGG - tig0026063:17271-17290 Msa1426700:intron 40.0%
CTCAAAGCATATGCAAGCAA+AGG + tig0026063:17309-17328 None:intergenic 40.0%
ATCAAAAAGAACATCGCCAG+TGG + tig0026063:17336-17355 None:intergenic 40.0%
! GTTCTTTTTGATCCTCACAG+TGG - tig0026063:17344-17363 Msa1426700:intron 40.0%
! TCATAGTTTTCACCACTGTG+AGG + tig0026063:17359-17378 None:intergenic 40.0%
ACAGTGGTGAAAACTATGAC+AGG - tig0026063:17360-17379 Msa1426700:intron 40.0%
CAGTGGTGAAAACTATGACA+GGG - tig0026063:17361-17380 Msa1426700:intron 40.0%
TGAAAACTATGACAGGGATG+AGG - tig0026063:17367-17386 Msa1426700:intron 40.0%
!! AACTACAAAACCGGCTTGTA+AGG - tig0026063:17604-17623 Msa1426700:intron 40.0%
!! TAAAAGTACCACATCGGATG+AGG + tig0026063:17671-17690 None:intergenic 40.0%
!! GGGTGTTAAAAGTACCACAT+CGG + tig0026063:17677-17696 None:intergenic 40.0%
!!! TTTGTGGTGATGGCATGTTT+TGG - tig0026063:17876-17895 Msa1426700:intron 40.0%
CAGTAGTATAGGGAAGTCTA+AGG + tig0026063:18907-18926 None:intergenic 40.0%
GGTTTGTCGTCAGTAGTATA+GGG + tig0026063:18917-18936 None:intergenic 40.0%
! TGGTTTGTCGTCAGTAGTAT+AGG + tig0026063:18918-18937 None:intergenic 40.0%
TTTCGTCTACTCCTTGTTAC+TGG - tig0026063:18986-19005 Msa1426700:CDS 40.0%
TACTCCTTGTTACTGGAGAT+AGG - tig0026063:18993-19012 Msa1426700:CDS 40.0%
TGTTCCTATCTCCAGTAACA+AGG + tig0026063:19000-19019 None:intergenic 40.0%
GTTACTGGAGATAGGAACAA+AGG - tig0026063:19001-19020 Msa1426700:CDS 40.0%
GGAGATAGGAACAAAGGTTA+AGG - tig0026063:19007-19026 Msa1426700:CDS 40.0%
AAAGACATGGACCAATTTGG+TGG + tig0026063:19181-19200 None:intergenic 40.0%
TTTGTTCAGATTGCTCTTGG+CGG - tig0026063:19764-19783 Msa1426700:intron 40.0%
!!! CGGGACTTTTTCAATAGATC+TGG - tig0026063:19797-19816 Msa1426700:intron 40.0%
! CAAAGTCAAGTAACGGAACA+AGG + tig0026063:19925-19944 None:intergenic 40.0%
TGTTCCTGAAAAGAGACCAA+CGG - tig0026063:19943-19962 Msa1426700:intron 40.0%
GAGAAAAGCCTGGAAAGTTA+AGG - tig0026063:20056-20075 Msa1426700:intron 40.0%
ATGGGGAATATGACCATTGA+TGG - tig0026063:20112-20131 Msa1426700:intron 40.0%
!! TGTCTTTGGAGTTCCATCAA+TGG + tig0026063:20128-20147 None:intergenic 40.0%
!! TGGTAAGTTTTGATGGTCCT+TGG - tig0026063:20224-20243 Msa1426700:intron 40.0%
ACATTGAACATCATGCTCCA+AGG + tig0026063:20244-20263 None:intergenic 40.0%
GCAAATGGGTCATACTTAAG+AGG - tig0026063:20289-20308 Msa1426700:CDS 40.0%
GGGTCATACTTAAGAGGTTA+TGG - tig0026063:20295-20314 Msa1426700:CDS 40.0%
TGGTTTGAGAAACCCTTCAT+AGG - tig0026063:20315-20334 Msa1426700:CDS 40.0%
GGTTTGAGAAACCCTTCATA+GGG - tig0026063:20316-20335 Msa1426700:CDS 40.0%
TGGATGGAAGCCTATTACAA+TGG - tig0026063:20354-20373 Msa1426700:CDS 40.0%
GTGGATGAGAAAGATTGGGT+TGG + tig0026063:15256-15275 None:intergenic 45.0%
!! GGTGGTGGATGAGAAAGATT+GGG + tig0026063:15260-15279 None:intergenic 45.0%
!! TGGTGGTGGATGAGAAAGAT+TGG + tig0026063:15261-15280 None:intergenic 45.0%
TTCGGAAGATGAAGGAACTG+AGG - tig0026063:15403-15422 Msa1426700:three_prime_UTR 45.0%
GGAACTGAGGATTACAAACG+AGG - tig0026063:15416-15435 Msa1426700:three_prime_UTR 45.0%
ACTGAGGATTACAAACGAGG+TGG - tig0026063:15419-15438 Msa1426700:three_prime_UTR 45.0%
CAAACGAGGTGGTTATCATG+CGG - tig0026063:15430-15449 Msa1426700:three_prime_UTR 45.0%
GGTTATCATGCGGTTCAGAT+TGG - tig0026063:15440-15459 Msa1426700:three_prime_UTR 45.0%
TTGTTCAGAGTAAGCTTGGC+TGG - tig0026063:15489-15508 Msa1426700:three_prime_UTR 45.0%
TGTTCAGAGTAAGCTTGGCT+GGG - tig0026063:15490-15509 Msa1426700:three_prime_UTR 45.0%
! TTTCAACTGTTTGGCTCGCT+TGG - tig0026063:15519-15538 Msa1426700:three_prime_UTR 45.0%
! TTCAACTGTTTGGCTCGCTT+GGG - tig0026063:15520-15539 Msa1426700:three_prime_UTR 45.0%
CGCTTGGGATACTCTCAAAT+TGG - tig0026063:15535-15554 Msa1426700:three_prime_UTR 45.0%
! ACGATGCACCGACATTTACA+CGG - tig0026063:15820-15839 Msa1426700:CDS 45.0%
TCTGGTGTCCGTGTAAATGT+CGG + tig0026063:15831-15850 None:intergenic 45.0%
CGACATGTCATTGCCATATC+TGG + tig0026063:15849-15868 None:intergenic 45.0%
GACCAATGTCCAACACATGT+CGG + tig0026063:15940-15959 None:intergenic 45.0%
GACATTGGTCACACCTTTGA+TGG - tig0026063:15950-15969 Msa1426700:CDS 45.0%
! CACACCTTTGATGGAAGTGT+TGG - tig0026063:15959-15978 Msa1426700:CDS 45.0%
GTGCCTATGAAGCATGGATA+CGG - tig0026063:15981-16000 Msa1426700:CDS 45.0%
TGTCCGTATCCATGCTTCAT+AGG + tig0026063:15987-16006 None:intergenic 45.0%
!! TACAAGTGTCGGTGTTGTGT+CGG - tig0026063:16078-16097 Msa1426700:intron 45.0%
!! GTGCTTCATTGGTGCTACAT+AGG - tig0026063:16155-16174 Msa1426700:intron 45.0%
TCAGAGCATGTGTGTTACCT+AGG + tig0026063:16350-16369 None:intergenic 45.0%
AATTGCTGAAGGGGATCTAG+AGG - tig0026063:16497-16516 Msa1426700:intron 45.0%
TAGGCCCTGAATGCTTAAAG+TGG + tig0026063:16551-16570 None:intergenic 45.0%
GTGTAAGAAGATTGTCCCCA+AGG + tig0026063:16605-16624 None:intergenic 45.0%
!!! CTACCATGTTTTGGTGGGTT+TGG - tig0026063:16680-16699 Msa1426700:intron 45.0%
! AGTGGGACTCCTGATTTTCT+AGG + tig0026063:16795-16814 None:intergenic 45.0%
! ATGTTTTGTGGTCCCGTTCT+TGG + tig0026063:16850-16869 None:intergenic 45.0%
GGCTAAAAAAGCAGCTCAGA+AGG - tig0026063:16926-16945 Msa1426700:intron 45.0%
CTAGAAACCTGACTTCCTTG+TGG + tig0026063:17104-17123 None:intergenic 45.0%
CACAAGGAAGTCAGGTTTCT+AGG - tig0026063:17102-17121 Msa1426700:intron 45.0%
GACATCTATACTGCCTAGTC+TGG + tig0026063:17238-17257 None:intergenic 45.0%
TAGGCAGTATAGATGTCCTG+AGG - tig0026063:17241-17260 Msa1426700:intron 45.0%
AGATGTCCTGAGGTTCTTCT+AGG - tig0026063:17251-17270 Msa1426700:intron 45.0%
! ATATGCTTTGAGCTTGCCAC+TGG - tig0026063:17317-17336 Msa1426700:intron 45.0%
!! TACAAAACCGGCTTGTAAGG+TGG - tig0026063:17607-17626 Msa1426700:intron 45.0%
!! ACAAAACCGGCTTGTAAGGT+GGG - tig0026063:17608-17627 Msa1426700:intron 45.0%
! GAGGGAAGTTTTTGTGGTGA+TGG - tig0026063:17866-17885 Msa1426700:intron 45.0%
TGGTTCGTCTAGAAACCTAG+CGG - tig0026063:18087-18106 Msa1426700:intron 45.0%
TGTGTTTGGATGGAGGGTTT+AGG + tig0026063:18883-18902 None:intergenic 45.0%
! TAAGGGTGTGTTTGGATGGA+GGG + tig0026063:18889-18908 None:intergenic 45.0%
! AGTCTAAGGGTGTGTTTGGA+TGG + tig0026063:18893-18912 None:intergenic 45.0%
!! GGATCATCTGGCATTGATGA+TGG - tig0026063:19455-19474 Msa1426700:intron 45.0%
!! GCATTGATGATGGAGCTTCT+CGG - tig0026063:19465-19484 Msa1426700:intron 45.0%
!! CATTGATGATGGAGCTTCTC+GGG - tig0026063:19466-19485 Msa1426700:intron 45.0%
!! ATTGATGATGGAGCTTCTCG+GGG - tig0026063:19467-19486 Msa1426700:intron 45.0%
TGAAAAAGTCCCGGGAATAG+CGG + tig0026063:19790-19809 None:intergenic 45.0%
! GTGATTTGAGACACATTCGC+CGG - tig0026063:19819-19838 Msa1426700:intron 45.0%
TGGATGAGTAAGACACTGAG+CGG + tig0026063:19969-19988 None:intergenic 45.0%
CTCAGTGTCTTACTCATCCA+TGG - tig0026063:19969-19988 Msa1426700:intron 45.0%
GCATGGATGCTATTCACTGA+GGG + tig0026063:20022-20041 None:intergenic 45.0%
AGCATGGATGCTATTCACTG+AGG + tig0026063:20023-20042 None:intergenic 45.0%
CTCCGTTAATAGCATCAGCA+TGG + tig0026063:20039-20058 None:intergenic 45.0%
GCTATTAACGGAGAAAAGCC+TGG - tig0026063:20046-20065 Msa1426700:intron 45.0%
GTTAAGGGAAAAGAACGAGC+AGG - tig0026063:20072-20091 Msa1426700:intron 45.0%
GAGGCTGTGGAAGTTAGTAT+GGG - tig0026063:20094-20113 Msa1426700:intron 45.0%
AGGCTGTGGAAGTTAGTATG+GGG - tig0026063:20095-20114 Msa1426700:intron 45.0%
!!! ACGCCGATGGTTTTGTAGAT+TGG + tig0026063:20162-20181 None:intergenic 45.0%
TGAGAAACCCTTCATAGGGT+AGG - tig0026063:20320-20339 Msa1426700:CDS 45.0%
GAGAAACCCTTCATAGGGTA+GGG - tig0026063:20321-20340 Msa1426700:CDS 45.0%
GTGCACTCTATTGAGTGTGA+AGG + tig0026063:20429-20448 None:intergenic 45.0%
!!! ATGTTTTTTAATATAATTTT+TGG + tig0026063:18963-18982 None:intergenic 5.0%
GTTCAGAGTAAGCTTGGCTG+GGG - tig0026063:15491-15510 Msa1426700:three_prime_UTR 50.0%
TGTCAGAGTCCGACATGTGT+TGG - tig0026063:15928-15947 Msa1426700:CDS 50.0%
GTCCGACATGTGTTGGACAT+TGG - tig0026063:15935-15954 Msa1426700:CDS 50.0%
GGCACCAACACTTCCATCAA+AGG + tig0026063:15966-15985 None:intergenic 50.0%
! GTGTTGGTGCCTATGAAGCA+TGG - tig0026063:15975-15994 Msa1426700:CDS 50.0%
TGAAGCATGGATACGGACAC+CGG - tig0026063:15988-16007 Msa1426700:CDS 50.0%
ACACGACACATGTCCAACAC+TGG - tig0026063:16107-16126 Msa1426700:intron 50.0%
CACGACACATGTCCAACACT+GGG - tig0026063:16108-16127 Msa1426700:intron 50.0%
GATTATGCGTGTCCCAGTGT+TGG + tig0026063:16123-16142 None:intergenic 50.0%
GACACGCATAATCCGAGAAG+TGG - tig0026063:16130-16149 Msa1426700:intron 50.0%
AATGAAGCACGGCCACTTCT+CGG + tig0026063:16145-16164 None:intergenic 50.0%
!! GAAGAGTGCTCAGCACTACA+CGG - tig0026063:16440-16459 Msa1426700:intron 50.0%
GGATGTTCCACAAGGAAGTC+AGG - tig0026063:17094-17113 Msa1426700:intron 50.0%
! GGAAGTCAGGTTTCTAGGAG+AGG - tig0026063:17107-17126 Msa1426700:intron 50.0%
GCAAAGGACCACATATCTGC+CGG + tig0026063:17293-17312 None:intergenic 50.0%
!! CAAAACCGGCTTGTAAGGTG+GGG - tig0026063:17609-17628 Msa1426700:intron 50.0%
TCATTCCCCACCTTACAAGC+CGG + tig0026063:17617-17636 None:intergenic 50.0%
GTACCACATCGGATGAGGTA+TGG + tig0026063:17666-17685 None:intergenic 50.0%
CGTGATGAGTGACTCGATAG+CGG - tig0026063:17726-17745 Msa1426700:intron 50.0%
TGACCCAGCAGATCTCATGT+AGG - tig0026063:17750-17769 Msa1426700:intron 50.0%
GAGCCTACATGAGATCTGCT+GGG + tig0026063:17756-17775 None:intergenic 50.0%
AGAGCCTACATGAGATCTGC+TGG + tig0026063:17757-17776 None:intergenic 50.0%
TGATTGGCAACACTTCCGCT+AGG + tig0026063:18105-18124 None:intergenic 50.0%
TGGAGGGTTTAGGAGGTGAA+GGG + tig0026063:18873-18892 None:intergenic 50.0%
ATGGAGGGTTTAGGAGGTGA+AGG + tig0026063:18874-18893 None:intergenic 50.0%
GTTTGGATGGAGGGTTTAGG+AGG + tig0026063:18880-18899 None:intergenic 50.0%
! CTAAGGGTGTGTTTGGATGG+AGG + tig0026063:18890-18909 None:intergenic 50.0%
! GGGAAGTCTAAGGGTGTGTT+TGG + tig0026063:18897-18916 None:intergenic 50.0%
CCTAATATGCCTACCTTGCG+AGG + tig0026063:19498-19517 None:intergenic 50.0%
CCTCGCAAGGTAGGCATATT+AGG - tig0026063:19495-19514 Msa1426700:intron 50.0%
TAATAGGCCAGAACCGCAAC+CGG + tig0026063:19841-19860 None:intergenic 50.0%
! GCGGTTCTGGCCTATTACTA+AGG - tig0026063:19844-19863 Msa1426700:intron 50.0%
ACTCATCCATGGATGAGTGC+AGG - tig0026063:19980-19999 Msa1426700:intron 50.0%
AAGGGAAAAGAACGAGCAGG+AGG - tig0026063:20075-20094 Msa1426700:intron 50.0%
GGAGGCTGTGGAAGTTAGTA+TGG - tig0026063:20093-20112 Msa1426700:intron 50.0%
CTCTTGCCCTACCCTATGAA+GGG + tig0026063:20330-20349 None:intergenic 50.0%
TCTCTTGCCCTACCCTATGA+AGG + tig0026063:20331-20350 None:intergenic 50.0%
TCCTTCGACTTCAATGGCGG+AGG - tig0026063:15355-15374 Msa1426700:three_prime_UTR 55.0%
TCCTCCGCCATTGAAGTCGA+AGG + tig0026063:15359-15378 None:intergenic 55.0%
GTCAGTGTCTGTGTCGTGTC+CGG + tig0026063:16010-16029 None:intergenic 55.0%
GAGAAGTGGCCGTGCTTCAT+TGG - tig0026063:16144-16163 Msa1426700:intron 55.0%
TGCTCAGCACTACACGGAAG+CGG - tig0026063:16446-16465 Msa1426700:intron 55.0%
TCGTGGTATTCCCCTTCCCA+TGG - tig0026063:16644-16663 Msa1426700:intron 55.0%
AGCTCAGAAGGAAAGTCCCG+AGG - tig0026063:16938-16957 Msa1426700:intron 55.0%
AGAATCCTCCTCTGCTGCCT+CGG + tig0026063:16958-16977 None:intergenic 55.0%
ACTCGACTCCGGCAGATATG+TGG - tig0026063:17282-17301 Msa1426700:intron 55.0%
AGGCCATACCTCATCCGATG+TGG - tig0026063:17660-17679 Msa1426700:intron 55.0%
TTAACACCCTCCTCGCGTCT+AGG - tig0026063:17688-17707 Msa1426700:intron 55.0%
TTCAGTCCTAGACGCGAGGA+GGG + tig0026063:17697-17716 None:intergenic 55.0%
CGAGTCACTCATCACGCTTC+AGG + tig0026063:17722-17741 None:intergenic 55.0%
GGTTTAGGAGGTGAAGGGAG+GGG + tig0026063:18868-18887 None:intergenic 55.0%
GGGTTTAGGAGGTGAAGGGA+GGG + tig0026063:18869-18888 None:intergenic 55.0%
AGGGTTTAGGAGGTGAAGGG+AGG + tig0026063:18870-18889 None:intergenic 55.0%
! TGAGACACATTCGCCGGTTG+CGG - tig0026063:19825-19844 Msa1426700:intron 55.0%
CATGGATGAGTGCAGGTCCT+CGG - tig0026063:19987-20006 Msa1426700:intron 55.0%
AAAGAACGAGCAGGAGGCTG+TGG - tig0026063:20081-20100 Msa1426700:intron 55.0%
TAGGGTAGGGCAAGAGAAGC+TGG - tig0026063:20334-20353 Msa1426700:CDS 55.0%
GTAGGGCAAGAGAAGCTGGA+TGG - tig0026063:20338-20357 Msa1426700:CDS 55.0%
GCACTACACGGAAGCGGCAA+TGG - tig0026063:16452-16471 Msa1426700:intron 60.0%
GAATCCTCCTCTGCTGCCTC+GGG + tig0026063:16957-16976 None:intergenic 60.0%
GTTCAGTCCTAGACGCGAGG+AGG + tig0026063:17698-17717 None:intergenic 60.0%
GGTGTTCAGTCCTAGACGCG+AGG + tig0026063:17701-17720 None:intergenic 60.0%
TAGGAGGTGAAGGGAGGGGA+GGG + tig0026063:18864-18883 None:intergenic 60.0%
TTAGGAGGTGAAGGGAGGGG+AGG + tig0026063:18865-18884 None:intergenic 60.0%
! ACATTCGCCGGTTGCGGTTC+TGG - tig0026063:19831-19850 Msa1426700:intron 60.0%
!! GCGGCCGTTGGTCTCTTTTC+AGG + tig0026063:19950-19969 None:intergenic 60.0%
GTAAGACACTGAGCGGCCGT+TGG + tig0026063:19962-19981 None:intergenic 60.0%
CGAGGACCTGCACTCATCCA+TGG + tig0026063:19989-20008 None:intergenic 60.0%
ACTGAGGGCTCAAGAGTCCG+AGG + tig0026063:20007-20026 None:intergenic 60.0%
CCAATGTGCAGCTACGCCGA+TGG + tig0026063:20175-20194 None:intergenic 60.0%
CCATCGGCGTAGCTGCACAT+TGG - tig0026063:20172-20191 Msa1426700:intron 60.0%
GGAAAGTCCCGAGGCAGCAG+AGG - tig0026063:16947-16966 Msa1426700:intron 65.0%
AAGTCCCGAGGCAGCAGAGG+AGG - tig0026063:16950-16969 Msa1426700:intron 65.0%
TCTCGGGGTGATGCCTCGCA+AGG - tig0026063:19482-19501 Msa1426700:intron 65.0%
GGGGTGATGCCTCGCAAGGT+AGG - tig0026063:19486-19505 Msa1426700:intron 65.0%
CTCTTGGCGGCCGCTATTCC+CGG - tig0026063:19777-19796 Msa1426700:intron 65.0%
TCTTGGCGGCCGCTATTCCC+GGG - tig0026063:19778-19797 Msa1426700:intron 65.0%
Chromosome Type Strat End Strand Name
tig0026063 gene 15151 20634 15151 ID=Msa1426700;Name=Msa1426700
tig0026063 mRNA 15151 20634 15151 ID=Msa1426700-mRNA-1;Parent=Msa1426700;Name=Msa1426700-mRNA-1;_AED=0.03;_eAED=0.03;_QI=217|1|1|1|1|1|4|451|539
tig0026063 exon 15151 16012 15151 ID=Msa1426700-mRNA-1:exon:5075;Parent=Msa1426700-mRNA-1
tig0026063 exon 16282 16329 16282 ID=Msa1426700-mRNA-1:exon:5074;Parent=Msa1426700-mRNA-1
tig0026063 exon 18397 19368 18397 ID=Msa1426700-mRNA-1:exon:5073;Parent=Msa1426700-mRNA-1
tig0026063 exon 20229 20634 20229 ID=Msa1426700-mRNA-1:exon:5072;Parent=Msa1426700-mRNA-1
tig0026063 five_prime_UTR 20418 20634 20418 ID=Msa1426700-mRNA-1:five_prime_utr;Parent=Msa1426700-mRNA-1
tig0026063 CDS 20229 20417 20229 ID=Msa1426700-mRNA-1:cds;Parent=Msa1426700-mRNA-1
tig0026063 CDS 18397 19368 18397 ID=Msa1426700-mRNA-1:cds;Parent=Msa1426700-mRNA-1
tig0026063 CDS 16282 16329 16282 ID=Msa1426700-mRNA-1:cds;Parent=Msa1426700-mRNA-1
tig0026063 CDS 15602 16012 15602 ID=Msa1426700-mRNA-1:cds;Parent=Msa1426700-mRNA-1
tig0026063 three_prime_UTR 15151 15601 15151 ID=Msa1426700-mRNA-1:three_prime_utr;Parent=Msa1426700-mRNA-1
Gene Sequence

>Msa1426700

ATGGCGGAGGATCGCAAAGATGCGAGTGATTACAGTTCGGAAGATGAAGGAACTGAGGATTACAAACGAGGTGGTTATCATGCGGTTCAGATTGGTGACACTTTCAAAAATGGGTGCTATGTTGTTCAGAGTAAGCTTGGCTGGGGTCATTTTTCAACTGTTTGGCTCGCTTGGGATACTCTCAAATTGCGATATGTTGCCTTAAAAATTCAGAAGAGTGCTCAGCACTACACGGAAGCGGCAATGGATGAAATAAAGATTCTCAAACAAATTGCTGAAGGGGATCTAGAGGATAAGAAATGTGTTGTGAAGCTTTTGGACCACTTTAAGCATTCAGGGCCTAATGGTCAGCATGTTTGTATGGTTTTTGAATTCCTTGGGGACAATCTTCTTACACTTATCAAGTATAGTGATTATCGTGGTATTCCCCTTCCCATGGTCAAAGAAATTTGCTACCATGTTTTGGTGGGTTTGGATTATTTGCATCGTGAGCTTTCTATAATACACACTGATTTGAAGCCAGAAAATGTTTTGCTTGTCTCTCCAATAGATCCATCTAAAGATCCTAGAAAATCAGGAGTCCCACTTATACTTCCAACCACTAAAGTCAAGACTGTATCCAAGAACGGGACCACAAAACATGATAAAAGTTCGAATGGAGATTTAACCAAGAACCAGAAAAAGAAGATGCGGAAAAAGGCTAAAAAAGCAGCTCAGAAGGAAAGTCCCGAGGCAGCAGAGGAGGATTCTGAAGCACCTGAACAAGATGATTCTAGTAATGATGTGAAACCAATTGTAGAAAATGGTGAAGGTAAACCTAATAGTCCCACAAGTAAAGATGAATCAGCAATGACTTCTGAAACTAAGGATGTTCCACAAGGAAGTCAGGTTTCTAGGAGAGGTAGTTGCTCTACGAGAAAGAAGTTGCTCGCAGCTGCTGATCTTAAGTGCAAGCTTGTGGATTTTGGAAATGCTTGTTGGACGTATAAACAATTTACAAATGATATCCAGACTAGGCAGTATAGATGTCCTGAGGTTCTTCTAGGTTCTAAATACTCGACTCCGGCAGATATGTGGTCCTTTGCTTGCATATGCTTTGAGCTTGCCACTGGCGATGTTCTTTTTGATCCTCACAGTGGTGAAAACTATGACAGGGATGAGGATCATCTGGCATTGATGATGGAGCTTCTCGGGGTGATGCCTCGCAAGATTGCTCTTGGCGGCCGCTATTCCCGGGACTTTTTCAATAGATCTGGTGATTTGAGACACATTCGCCGGTTGCGGTTCTGGCCTATTACTAAGGTTTTGACGGAGAAGTATGATTTCAGTGCGCAAGATGCAAGTGACATGTCTGACTTCCTTGTTCCGTTACTTGACTTTGTTCCTGAAAAGAGACCAACGGCCGCTCAGTGTCTTACTCATCCATGGATGAGTGCAGGTCCTCGGACTCTTGAGCCCTCAGTGAATAGCATCCATGCTGATGCTATTAACGGAGAAAAGCCTGGAAAGTTAAGGGAAAAGAACGAGCAGGAGGCTGTGGAAGTTAGTATGGGGAATATGACCATTGATGGAACTCCAAAGACACTCAAAGATTTCCAATCTACAAAACCATCGGCGTAG
Protein sequence

>Msa1426700

MAEDRKDASDYSSEDEGTEDYKRGGYHAVQIGDTFKNGCYVVQSKLGWGHFSTVWLAWDTLKLRYVALKIQKSAQHYTEAAMDEIKILKQIAEGDLEDKKCVVKLLDHFKHSGPNGQHVCMVFEFLGDNLLTLIKYSDYRGIPLPMVKEICYHVLVGLDYLHRELSIIHTDLKPENVLLVSPIDPSKDPRKSGVPLILPTTKVKTVSKNGTTKHDKSSNGDLTKNQKKKMRKKAKKAAQKESPEAAEEDSEAPEQDDSSNDVKPIVENGEGKPNSPTSKDESAMTSETKDVPQGSQVSRRGSCSTRKKLLAAADLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADMWSFACICFELATGDVLFDPHSGENYDRDEDHLALMMELLGVMPRKIALGGRYSRDFFNRSGDLRHIRRLRFWPITKVLTEKYDFSAQDASDMSDFLVPLLDFVPEKRPTAAQCLTHPWMSAGPRTLEPSVNSIHADAINGEKPGKLREKNEQEAVEVSMGNMTIDGTPKTLKDFQSTKPSA*