AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0218470

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0218470 MtrunA17_Chr2g0320631 97.955 538 11 0 1 538 1 538 0.0 1098
Msa0218470 MtrunA17_Chr4g0027671 76.394 538 118 4 9 539 8 543 0.0 839
Msa0218470 MtrunA17_Chr1g0179611 69.794 533 140 6 7 529 11 532 0.0 780
Msa0218470 MtrunA17_Chr5g0407121 48.713 505 179 4 19 522 17 442 1.68e-170 489
Msa0218470 MtrunA17_Chr8g0370321 47.817 504 181 5 19 522 17 438 2.18e-166 479
Msa0218470 MtrunA17_Chr4g0058241 37.342 158 92 4 25 182 84 234 4.93e-27 113
Msa0218470 MtrunA17_Chr4g0058241 29.146 199 106 6 296 477 243 423 1.01e-14 76.3
Msa0218470 MtrunA17_Chr3g0116701 36.943 157 92 4 25 181 80 229 1.01e-25 109
Msa0218470 MtrunA17_Chr3g0116701 30.189 212 110 9 284 477 228 419 1.31e-18 88.2
Msa0218470 MtrunA17_Chr3g0139371 37.037 162 95 4 20 181 55 209 1.49e-25 108
Msa0218470 MtrunA17_Chr3g0139371 34.483 174 87 5 318 477 238 398 3.07e-22 99.0
Msa0218470 MtrunA17_Chr3g0123491 32.911 158 99 4 25 182 79 229 3.66e-23 102
Msa0218470 MtrunA17_Chr3g0123491 28.249 177 98 5 318 479 260 422 9.37e-15 76.6
Msa0218470 MtrunA17_Chr8g0369241 37.762 143 83 3 40 181 139 276 1.64e-21 99.0
Msa0218470 MtrunA17_Chr8g0369241 29.167 240 116 7 309 500 273 506 1.57e-15 80.1
Msa0218470 MtrunA17_Chr6g0480541 31.737 167 102 4 316 478 1043 1201 8.17e-20 94.0
Msa0218470 MtrunA17_Chr6g0480541 34.459 148 88 3 38 181 896 1038 4.98e-15 78.6
Msa0218470 MtrunA17_Chr5g0437131 31.429 175 106 6 316 484 546 712 8.78e-19 90.1
Msa0218470 MtrunA17_Chr5g0437131 37.838 148 83 3 38 181 401 543 1.07e-15 80.5
Msa0218470 MtrunA17_Chr1g0210061 30.108 186 109 4 309 479 748 927 6.48e-16 81.3
Msa0218470 MtrunA17_Chr1g0210061 31.875 160 98 5 25 179 596 749 1.60e-15 80.1
Msa0218470 MtrunA17_Chr4g0045841 34.091 176 93 9 308 479 186 342 8.48e-12 67.0
Msa0218470 MtrunA17_Chr4g0030231 33.333 174 96 7 309 479 172 328 9.08e-12 67.0
Msa0218470 MtrunA17_Chr4g0065851 29.958 237 131 11 307 532 155 367 2.82e-11 66.2
Msa0218470 MtrunA17_Chr8g0348481 33.708 178 90 9 308 478 168 324 4.17e-11 64.7
Msa0218470 MtrunA17_Chr8g0387401 32.258 186 100 8 309 488 184 349 4.85e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0218470 AT3G53030.1 70.349 516 138 3 7 522 9 509 0.0 756
Msa0218470 AT3G44850.1 71.082 536 135 6 1 523 1 529 0.0 744
Msa0218470 AT5G22840.1 69.772 526 139 4 7 527 12 522 0.0 739
Msa0218470 AT4G35500.1 48.954 478 177 5 21 492 19 435 5.71e-165 476
Msa0218470 AT4G35500.2 46.973 479 186 6 21 492 19 436 1.47e-155 451
Msa0218470 AT2G17530.2 63.483 178 65 0 21 198 19 196 3.37e-79 253
Msa0218470 AT2G17530.2 47.500 160 76 2 253 404 183 342 9.26e-40 148
Msa0218470 AT2G17530.1 60.417 192 73 1 21 212 19 207 8.38e-78 252
Msa0218470 AT2G17530.1 44.128 281 124 3 253 525 183 438 1.18e-76 249
Msa0218470 AT2G17530.3 60.417 192 73 1 21 212 19 207 8.38e-78 252
Msa0218470 AT2G17530.3 44.128 281 124 3 253 525 183 438 1.18e-76 249
Msa0218470 AT4G24740.4 34.171 199 116 6 25 216 84 274 8.74e-27 111
Msa0218470 AT4G24740.3 34.171 199 116 6 25 216 84 274 1.41e-26 111
Msa0218470 AT4G24740.3 42.529 87 44 2 318 404 263 343 1.66e-14 75.5
Msa0218470 AT4G24740.7 34.171 199 116 6 25 216 46 236 1.94e-26 111
Msa0218470 AT4G24740.7 31.844 179 87 7 318 478 225 386 2.77e-17 84.3
Msa0218470 AT4G24740.1 34.171 199 116 6 25 216 84 274 3.07e-26 111
Msa0218470 AT4G24740.1 31.844 179 87 7 318 478 263 424 3.43e-17 84.3
Msa0218470 AT4G32660.2 37.037 162 95 4 20 181 52 206 5.81e-25 106
Msa0218470 AT4G32660.2 38.095 105 58 2 318 421 235 333 1.16e-14 75.9
Msa0218470 AT4G32660.1 37.037 162 95 4 20 181 52 206 8.00e-25 107
Msa0218470 AT4G32660.1 32.203 177 92 5 318 479 235 398 1.01e-17 85.9
Msa0218470 AT4G32660.3 37.037 162 95 3 20 181 44 198 8.03e-25 107
Msa0218470 AT4G32660.3 32.203 177 92 5 318 479 227 390 9.77e-18 85.9
Msa0218470 AT4G24740.5 38.411 151 86 4 46 196 1 144 3.20e-24 102
Msa0218470 AT4G24740.5 42.529 87 44 2 318 404 160 240 8.86e-15 74.7
Msa0218470 AT3G53570.1 36.943 157 92 4 25 181 101 250 4.21e-24 105
Msa0218470 AT3G53570.1 29.148 223 120 7 284 488 249 451 8.26e-19 89.7
Msa0218470 AT3G53570.4 36.943 157 92 4 25 181 101 250 4.21e-24 105
Msa0218470 AT3G53570.4 29.148 223 120 7 284 488 249 451 8.26e-19 89.7
Msa0218470 AT3G53570.2 36.943 157 92 4 25 181 101 250 4.21e-24 105
Msa0218470 AT3G53570.2 29.148 223 120 7 284 488 249 451 8.26e-19 89.7
Msa0218470 AT3G53570.3 36.943 157 92 4 25 181 87 236 5.22e-24 105
Msa0218470 AT3G53570.3 29.148 223 120 7 284 488 235 437 8.82e-19 89.7
Msa0218470 AT3G53570.5 36.943 157 92 4 25 181 87 236 5.22e-24 105
Msa0218470 AT3G53570.5 29.148 223 120 7 284 488 235 437 8.82e-19 89.7
Msa0218470 AT4G24740.6 38.411 151 86 4 46 196 1 144 6.82e-24 103
Msa0218470 AT4G24740.6 31.844 179 87 7 318 478 160 321 1.49e-17 84.3
Msa0218470 AT4G24740.9 38.411 151 86 4 46 196 1 144 6.82e-24 103
Msa0218470 AT4G24740.9 31.844 179 87 7 318 478 160 321 1.49e-17 84.3
Msa0218470 AT4G24740.2 38.411 151 86 4 46 196 1 144 6.82e-24 103
Msa0218470 AT4G24740.2 31.844 179 87 7 318 478 160 321 1.49e-17 84.3
Msa0218470 AT5G35980.1 37.584 149 87 3 40 187 122 265 8.54e-23 103
Msa0218470 AT5G35980.1 29.825 228 99 9 307 483 253 470 1.72e-14 77.0
Msa0218470 AT5G35980.3 37.584 149 87 3 40 187 87 230 8.87e-23 103
Msa0218470 AT5G35980.3 30.263 228 98 8 307 483 218 435 2.50e-14 76.6
Msa0218470 AT5G35980.2 37.584 149 87 3 40 187 122 265 1.47e-22 102
Msa0218470 AT5G35980.2 30.263 228 98 8 307 483 253 470 1.62e-14 77.0
Msa0218470 AT1G73460.2 32.584 178 106 5 307 478 992 1161 1.32e-21 99.8
Msa0218470 AT1G73460.2 34.459 148 88 3 38 181 856 998 6.86e-15 78.6
Msa0218470 AT1G73460.1 32.584 178 106 5 307 478 992 1161 1.32e-21 99.8
Msa0218470 AT1G73460.1 34.459 148 88 3 38 181 856 998 6.86e-15 78.6
Msa0218470 AT1G73450.1 32.584 178 106 5 307 478 975 1144 1.40e-21 99.8
Msa0218470 AT1G73450.1 34.459 148 88 3 38 181 839 981 7.51e-15 78.6
Msa0218470 AT2G40120.1 33.133 166 101 4 318 480 408 566 3.30e-20 94.7
Msa0218470 AT2G40120.1 33.548 155 94 3 31 181 252 401 1.26e-13 73.9
Msa0218470 AT4G24740.10 31.844 179 87 7 318 478 57 218 1.49e-18 85.1
Msa0218470 AT4G24740.8 31.844 179 87 7 318 478 57 218 1.49e-18 85.1
Msa0218470 AT4G32660.4 32.022 178 93 5 318 480 123 287 5.32e-18 85.1
Msa0218470 AT4G32660.4 38.000 100 56 2 82 181 1 94 1.05e-13 72.4
Msa0218470 AT3G17750.1 30.357 168 103 4 316 478 972 1130 1.98e-17 86.7
Msa0218470 AT3G17750.1 33.784 148 89 3 38 181 825 967 5.36e-14 75.9
Msa0218470 AT1G13350.1 33.750 160 95 5 25 179 428 581 2.40e-16 82.8
Msa0218470 AT1G13350.1 29.213 178 104 5 318 479 589 760 7.31e-15 78.2
Msa0218470 AT1G13350.2 33.750 160 95 5 25 179 455 608 2.95e-16 82.8
Msa0218470 AT1G13350.2 29.213 178 104 5 318 479 616 787 9.13e-15 77.8
Msa0218470 AT3G25840.1 32.500 160 97 5 25 179 603 756 4.51e-16 82.4
Msa0218470 AT3G25840.1 32.240 183 91 8 318 479 764 934 3.46e-15 79.3
Msa0218470 AT1G13350.3 33.750 160 95 5 25 179 501 654 5.40e-16 82.0
Msa0218470 AT1G13350.3 29.213 178 104 5 318 479 662 833 1.23e-14 77.4
Msa0218470 AT3G25840.2 32.500 160 97 5 25 179 341 494 1.43e-15 80.5
Msa0218470 AT3G25840.2 32.240 183 91 8 318 479 502 672 3.44e-15 79.0
Msa0218470 AT3G53640.1 30.899 178 101 6 318 479 470 641 4.15e-15 79.0
Msa0218470 AT3G53640.1 31.875 160 98 5 25 179 309 462 1.10e-13 74.3
Msa0218470 AT3G59790.1 31.818 176 95 8 309 479 192 347 2.00e-11 66.2
Msa0218470 AT4G11330.1 32.203 177 94 8 309 479 175 331 5.79e-11 64.7

Find 166 sgRNAs with CRISPR-Local

Find 401 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCAGTGAATGGGAAAATT+AGG 0.138672 2_1:-65643546 None:intergenic
CTCTTGGCGGCCGCTATTCC+CGG 0.220901 2_1:+65648134 Msa0218470:CDS
TCTTTACTTGTGGGACTATT+AGG 0.223443 2_1:-65645344 None:intergenic
AAGTGCAAGCTTGTGGATTT+TGG 0.224760 2_1:+65645473 Msa0218470:CDS
TTGGACCACTTTAAGCATTC+AGG 0.246674 2_1:+65644843 Msa0218470:CDS
TGGAAATCTTTGAGTGTCTT+TGG 0.254658 2_1:-65648496 None:intergenic
AGAAATTTGCTACCATGTTT+TGG 0.273662 2_1:+65644971 Msa0218470:CDS
ACATTCGCCGGTTGCGGTTC+TGG 0.294454 2_1:+65648188 Msa0218470:CDS
CGCTTGGGATACTCAGAAAT+TGG 0.296679 2_1:+65643880 Msa0218470:CDS
GGAGGCTGTGGAAGTTAGTA+TGG 0.298166 2_1:+65648450 Msa0218470:CDS
TTTCAACTGTTTGGCTCGCT+TGG 0.308825 2_1:+65643864 Msa0218470:CDS
GGATCTTTAGATGGATCTAT+TGG 0.324147 2_1:-65645071 None:intergenic
AGCAATGACTTCTGAAACTA+AGG 0.331800 2_1:+65645373 Msa0218470:CDS
CACAAGGAAGTCAGGTTTCT+AGG 0.332484 2_1:+65645402 Msa0218470:CDS
GGGTCATACTTAAGAGGTTA+TGG 0.335126 2_1:+65648652 Msa0218470:three_prime_UTR
CATTGATGATGGAGCTTCTC+GGG 0.335701 2_1:+65647822 Msa0218470:CDS
TTCAGTGAATGGGAAAATTA+GGG 0.339771 2_1:-65643545 None:intergenic
TGGCATAACTCCATTGTAAT+AGG 0.342783 2_1:-65648721 None:intergenic
TTGTTCAGAGTAAGCTTGGC+TGG 0.354810 2_1:+65643834 Msa0218470:CDS
GTGAAACCAATTGTAGAAAA+TGG 0.359586 2_1:+65645311 Msa0218470:CDS
TCTAAAGATCCTAGAAAATC+AGG 0.368774 2_1:+65645083 Msa0218470:CDS
GCTGATTCATCTTTACTTGT+GGG 0.369166 2_1:-65645353 None:intergenic
GCGGTTCTGGCCTATTACTA+AGG 0.369946 2_1:+65648201 Msa0218470:CDS
TTACTAGAATCATCTTGTTC+AGG 0.373035 2_1:-65645284 None:intergenic
TGAATCTATTTGAAGAATAA+TGG 0.374054 2_1:-65643623 None:intergenic
GGATAATGAGCATCTAATCT+AGG 0.378098 2_1:-65648869 None:intergenic
ATCCATGCTGATGCTATTAA+CGG 0.392213 2_1:+65648391 Msa0218470:CDS
TGGTTTGAGAAACCCTTCAT+AGG 0.394006 2_1:+65648672 Msa0218470:three_prime_UTR
AGATGTCCTGAGGTTCTTCT+AGG 0.395840 2_1:+65645551 Msa0218470:CDS
GAAATGTGTTGTGAAGCTTT+TGG 0.397383 2_1:+65644824 Msa0218470:CDS
GCATTGATGATGGAGCTTCT+CGG 0.398990 2_1:+65647821 Msa0218470:CDS
TAATGGTCAGCATGTTTGTA+TGG 0.402029 2_1:+65644869 Msa0218470:CDS
ATTTACTCTTCAGGATCATC+TGG 0.402061 2_1:+65647799 Msa0218470:intron
TTTAAGCATTCAGGGCCTAA+TGG 0.407435 2_1:+65644852 Msa0218470:CDS
TTCAACTGTTTGGCTCGCTT+GGG 0.408495 2_1:+65643865 Msa0218470:CDS
TTATAAGCATTATGTGCAAA+TGG 0.411340 2_1:+65648631 Msa0218470:three_prime_UTR
AGAATCCTCCTCTGCTGCCT+CGG 0.415247 2_1:-65645255 None:intergenic
GAGAAAAGCCTGGAAAGTTA+AGG 0.417273 2_1:+65648413 Msa0218470:CDS
GGATACAGTCTTGACTTTAG+TGG 0.417337 2_1:-65645126 None:intergenic
TGAGACACATTCGCCGGTTG+CGG 0.421836 2_1:+65648182 Msa0218470:CDS
TGCTGATTCATCTTTACTTG+TGG 0.423615 2_1:-65645354 None:intergenic
TGGACCACTTTAAGCATTCA+GGG 0.426302 2_1:+65644844 Msa0218470:CDS
TCCTCGGACTCTTGAGCCCT+CGG 0.427106 2_1:+65648360 Msa0218470:CDS
TCTCTTGCCCTACCCTATGA+AGG 0.427728 2_1:-65648685 None:intergenic
ATGGGGAATATGACCATTGA+TGG 0.429055 2_1:+65648469 Msa0218470:CDS
ATTAAGCTTCAAACTAGTAT+TGG 0.429527 2_1:-65643678 None:intergenic
GACATCTATACTGCCTAGTC+TGG 0.431990 2_1:-65645535 None:intergenic
TCCGTCAAAACCTTAGTAAT+AGG 0.434151 2_1:-65648211 None:intergenic
GCTTAATCCTTCGACTTCAA+TGG 0.441539 2_1:+65643694 Msa0218470:exon
TTCTTGTAAAAGTGTGTAGA+AGG 0.444333 2_1:+65648754 Msa0218470:three_prime_UTR
TGGTGGTGGATGAGAAAGAT+TGG 0.445967 2_1:-65643603 None:intergenic
GCCTGGAAAGTTAAGGGAAA+AGG 0.451200 2_1:+65648420 Msa0218470:CDS
GGATGTTCCACAAGGAAGTC+AGG 0.451642 2_1:+65645394 Msa0218470:CDS
TAGGGTAGGGCAAGAGAAGC+TGG 0.453382 2_1:+65648691 Msa0218470:three_prime_UTR
TTTCCCATTCACTGAATTCG+AGG 0.463468 2_1:+65643552 Msa0218470:five_prime_UTR
GAATCCTCCTCTGCTGCCTC+GGG 0.466324 2_1:-65645254 None:intergenic
AGAAAAGCCTGGAAAGTTAA+GGG 0.469505 2_1:+65648414 Msa0218470:CDS
TGTTCAGAGTAAGCTTGGCT+GGG 0.480298 2_1:+65643835 Msa0218470:CDS
TCTTGGCGGCCGCTATTCCC+GGG 0.484079 2_1:+65648135 Msa0218470:CDS
CTCAGTGTCTTACTCATCCA+TGG 0.484235 2_1:+65648326 Msa0218470:CDS
TCAAGACTGTATCCAAGAAC+GGG 0.487936 2_1:+65645135 Msa0218470:CDS
GGATCATCTGGCATTGATGA+TGG 0.488648 2_1:+65647811 Msa0218470:intron
ATACAAACATGCTGACCATT+AGG 0.491084 2_1:-65644867 None:intergenic
GTAGCAAATTTCTTTGACCA+TGG 0.492513 2_1:-65644961 None:intergenic
ATATGCTTTGAGCTTGCCAC+TGG 0.494568 2_1:+65645617 Msa0218470:CDS
CTCTTGCCCTACCCTATGAA+GGG 0.496347 2_1:-65648684 None:intergenic
ATTGGGTTGGAGTGAAATTG+AGG 0.498354 2_1:-65643585 None:intergenic
TATAAGCATTATGTGCAAAT+GGG 0.501452 2_1:+65648632 Msa0218470:three_prime_UTR
GGAAAGTCCCGAGGCAGCAG+AGG 0.502003 2_1:+65645247 Msa0218470:CDS
GCTATTAACGGAGAAAAGCC+TGG 0.503727 2_1:+65648403 Msa0218470:CDS
AAAGGACGAGCAGGAGGCTG+TGG 0.504267 2_1:+65648438 Msa0218470:CDS
GTTAAGGGAAAAGGACGAGC+AGG 0.505811 2_1:+65648429 Msa0218470:CDS
TAATAGGCCAGAACCGCAAC+CGG 0.505990 2_1:-65648195 None:intergenic
GATAATGAGCATCTAATCTA+GGG 0.506524 2_1:-65648868 None:intergenic
AAAACCTCGAATTCAGTGAA+TGG 0.506638 2_1:-65643556 None:intergenic
AAACCTCGAATTCAGTGAAT+GGG 0.509572 2_1:-65643555 None:intergenic
TATGTTGTTCAGAGTAAGCT+TGG 0.509816 2_1:+65643830 Msa0218470:CDS
TTGGGTTGGAGTGAAATTGA+GGG 0.513437 2_1:-65643584 None:intergenic
GCAAATGGGTCATACTTAAG+AGG 0.513458 2_1:+65648646 Msa0218470:three_prime_UTR
TTTGTTCAGATTGCTCTTGG+CGG 0.517367 2_1:+65648121 Msa0218470:intron
AATTTCTTTGACCATGGGAA+GGG 0.522927 2_1:-65644955 None:intergenic
GGTTATCATGCGGTTCAGAT+TGG 0.523054 2_1:+65643785 Msa0218470:CDS
TGTCTTTGGAGTTCCATCAA+TGG 0.524200 2_1:-65648482 None:intergenic
GAGAAACCCTTCATAGGGTA+GGG 0.526215 2_1:+65648678 Msa0218470:three_prime_UTR
TTAGTGGTTGGAAGTATAAG+TGG 0.528613 2_1:-65645110 None:intergenic
ATTTCTTTGACCATGGGAAG+GGG 0.529053 2_1:-65644954 None:intergenic
GCACTACACGGAAGCGGCAA+TGG 0.529430 2_1:+65644752 Msa0218470:CDS
TCTCAAACAAATTGCTGAAG+GGG 0.530198 2_1:+65644788 Msa0218470:CDS
AAGTCCCGAGGCAGCAGAGG+AGG 0.531648 2_1:+65645250 Msa0218470:CDS
CGAGGACCTGCACTCATCCA+TGG 0.534400 2_1:-65648343 None:intergenic
GTTCAGAGTAAGCTTGGCTG+GGG 0.535588 2_1:+65643836 Msa0218470:CDS
CAAAGTCAAGTAACGGAACA+AGG 0.536228 2_1:-65648279 None:intergenic
ATTCTCAAACAAATTGCTGA+AGG 0.536936 2_1:+65644786 Msa0218470:CDS
CATGGATGAGTGCAGGTCCT+CGG 0.537891 2_1:+65648344 Msa0218470:CDS
ACAGTGGTGAAAACTATGAC+AGG 0.544366 2_1:+65645660 Msa0218470:CDS
GGTTTGAGAAACCCTTCATA+GGG 0.544952 2_1:+65648673 Msa0218470:three_prime_UTR
TTGGAGTGAAATTGAGGGAA+AGG 0.545619 2_1:-65643579 None:intergenic
TGAGAAACCCTTCATAGGGT+AGG 0.545723 2_1:+65648677 Msa0218470:three_prime_UTR
ACTCGACTCCGGCAGATATG+TGG 0.548164 2_1:+65645582 Msa0218470:CDS
TCCTTCGACTTCAATGGCGG+AGG 0.550311 2_1:+65643700 Msa0218470:exon
TGGATGGAAGCCTATTACAA+TGG 0.552235 2_1:+65648711 Msa0218470:three_prime_UTR
AAACATGATAAAAGTTCGAA+TGG 0.554779 2_1:+65645164 Msa0218470:CDS
CTCCGTTAATAGCATCAGCA+TGG 0.557184 2_1:-65648393 None:intergenic
TTAGAACCTAGAAGAACCTC+AGG 0.563105 2_1:-65645557 None:intergenic
TTCTCAAACAAATTGCTGAA+GGG 0.564427 2_1:+65644787 Msa0218470:CDS
TGCTCAGCACTACACGGAAG+CGG 0.566332 2_1:+65644746 Msa0218470:CDS
ACTCATCCATGGATGAGTGC+AGG 0.567258 2_1:+65648337 Msa0218470:CDS
AAATTTCTTTGACCATGGGA+AGG 0.567519 2_1:-65644956 None:intergenic
GTCAAGACTGTATCCAAGAA+CGG 0.569523 2_1:+65645134 Msa0218470:CDS
GTGGATGAGAAAGATTGGGT+TGG 0.570002 2_1:-65643598 None:intergenic
GTGTAAGAAGATTGTCCCCA+AGG 0.570530 2_1:-65644902 None:intergenic
TAGCAAATTTCTTTGACCAT+GGG 0.571005 2_1:-65644960 None:intergenic
CCTAATATGCCTACCTTGCG+AGG 0.572307 2_1:-65647851 None:intergenic
GCAAAGGACCACATATCTGC+CGG 0.573521 2_1:-65645590 None:intergenic
GAGGCTGTGGAAGTTAGTAT+GGG 0.573693 2_1:+65648451 Msa0218470:CDS
GGTGGTGGATGAGAAAGATT+GGG 0.576553 2_1:-65643602 None:intergenic
TCGTGGTATTCCCCTTCCCA+TGG 0.577077 2_1:+65644944 Msa0218470:CDS
TTTACAAGAAGTGAAAGAAG+TGG 0.578789 2_1:-65648741 None:intergenic
ACAGTCTTGACTTTAGTGGT+TGG 0.580495 2_1:-65645122 None:intergenic
CTCAAAGCATATGCAAGCAA+AGG 0.581090 2_1:-65645606 None:intergenic
GATTACAGTTCGGAAGATGA+AGG 0.582493 2_1:+65643740 Msa0218470:CDS
TCAGGAACAAAGTCAAGTAA+CGG 0.586688 2_1:-65648286 None:intergenic
AGATGCGAGTGATTACAGTT+CGG 0.587171 2_1:+65643730 Msa0218470:CDS
GTGATTTGAGACACATTCGC+CGG 0.588620 2_1:+65648176 Msa0218470:CDS
TGATCTTAAGTGCAAGCTTG+TGG 0.588631 2_1:+65645466 Msa0218470:CDS
GTAGGGCAAGAGAAGCTGGA+TGG 0.592297 2_1:+65648695 Msa0218470:three_prime_UTR
TTAAGAAACAAAAGATGTAA+CGG 0.596342 2_1:-65648984 None:intergenic
TCTCGGGGTGATGCCTCGCA+AGG 0.596451 2_1:+65647838 Msa0218470:CDS
AATTGCTGAAGGGGATCTAG+AGG 0.602637 2_1:+65644797 Msa0218470:CDS
CCATCGGCGTAGCTGCACAT+TGG 0.604550 2_1:+65648529 Msa0218470:exon
GGAAGTCAGGTTTCTAGGAG+AGG 0.605679 2_1:+65645407 Msa0218470:CDS
TAGGCCCTGAATGCTTAAAG+TGG 0.607415 2_1:-65644848 None:intergenic
CCAATGTGCAGCTACGCCGA+TGG 0.609488 2_1:-65648529 None:intergenic
AAGGGAAAAGGACGAGCAGG+AGG 0.611497 2_1:+65648432 Msa0218470:CDS
GCATGGATGCTATTCACCGA+GGG 0.613638 2_1:-65648376 None:intergenic
TATTTGAAGAATAATGGTGG+TGG 0.615793 2_1:-65643617 None:intergenic
TAGTGGTTGGAAGTATAAGT+GGG 0.617001 2_1:-65645109 None:intergenic
TCCTCCGCCATTGAAGTCGA+AGG 0.617006 2_1:-65643701 None:intergenic
GTAAGACACTGAGCGGCCGT+TGG 0.620524 2_1:-65648316 None:intergenic
TGAAAACTATGACAGGGATG+AGG 0.621612 2_1:+65645667 Msa0218470:CDS
CCAATTGTAGAAAATGGTGA+AGG 0.622581 2_1:+65645317 Msa0218470:CDS
TTTCCAATCTACAAAACCAT+CGG 0.628317 2_1:+65648513 Msa0218470:CDS
CTAGAAACCTGACTTCCTTG+TGG 0.628911 2_1:-65645401 None:intergenic
AATCCAAACCCACCAAAACA+TGG 0.629227 2_1:-65644983 None:intergenic
AGGTTCTAAATACTCGACTC+CGG 0.631900 2_1:+65645571 Msa0218470:CDS
TAATCCTTCGACTTCAATGG+CGG 0.636314 2_1:+65643697 Msa0218470:exon
ACCGAGGGCTCAAGAGTCCG+AGG 0.638849 2_1:-65648361 None:intergenic
ACATTGAACATCATGCTCCA+AGG 0.639562 2_1:-65648598 None:intergenic
AGCTCAGAAGGAAAGTCCCG+AGG 0.651825 2_1:+65645238 Msa0218470:CDS
GTGCACTCTATTGAGTGTGA+AGG 0.658270 2_1:-65648783 None:intergenic
ATCTATTTGAAGAATAATGG+TGG 0.661720 2_1:-65643620 None:intergenic
TGTTCCTGAAAAGAGACCAA+CGG 0.664722 2_1:+65648300 Msa0218470:CDS
GAAGAGTGCTCAGCACTACA+CGG 0.666377 2_1:+65644740 Msa0218470:CDS
CAAACGAGGTGGTTATCATG+CGG 0.669550 2_1:+65643775 Msa0218470:CDS
ATTGATGATGGAGCTTCTCG+GGG 0.671822 2_1:+65647823 Msa0218470:CDS
TTCGGAAGATGAAGGAACTG+AGG 0.673927 2_1:+65643748 Msa0218470:CDS
CAGTGGTGAAAACTATGACA+GGG 0.675870 2_1:+65645661 Msa0218470:CDS
ATCAAGTATAGTGATTATCG+TGG 0.676361 2_1:+65644927 Msa0218470:CDS
GAAACTAAGGATGTTCCACA+AGG 0.679404 2_1:+65645386 Msa0218470:CDS
TTACAAATGATATCCAGACT+AGG 0.679700 2_1:+65645522 Msa0218470:CDS
AGGCTGTGGAAGTTAGTATG+GGG 0.683437 2_1:+65648452 Msa0218470:CDS
AGCATGGATGCTATTCACCG+AGG 0.701969 2_1:-65648377 None:intergenic
TAGGCAGTATAGATGTCCTG+AGG 0.713543 2_1:+65645541 Msa0218470:CDS
GGAACTGAGGATTACAAACG+AGG 0.716479 2_1:+65643761 Msa0218470:CDS
ACTGAGGATTACAAACGAGG+TGG 0.729665 2_1:+65643764 Msa0218470:CDS
TGGATGAGTAAGACACTGAG+CGG 0.731118 2_1:-65648323 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAACTTGAAATTTGAAAT+AGG - chr2_1:65643650-65643669 None:intergenic 15.0%
!! ATAAATCAAAACAATGAAAA+GGG - chr2_1:65643912-65643931 None:intergenic 15.0%
!! AATAAATCAAAACAATGAAA+AGG - chr2_1:65643913-65643932 None:intergenic 15.0%
!!! TTTTCATTGTTTTGATTTAT+TGG + chr2_1:65643912-65643931 Msa0218470:intron 15.0%
!!! TTTTTCTTGAAACTAATATA+AGG + chr2_1:65644076-65644095 Msa0218470:intron 15.0%
!!! TGAACTTCAAAATAAATTTT+TGG + chr2_1:65645700-65645719 Msa0218470:intron 15.0%
!! AAAAATAAGAAACATTTAGA+GGG + chr2_1:65645787-65645806 Msa0218470:intron 15.0%
!!! AAAAAATACTACTTTTAACT+TGG + chr2_1:65646508-65646527 Msa0218470:intron 15.0%
!!! TACTTTTCGTTTTTAAATTA+CGG - chr2_1:65647153-65647172 None:intergenic 15.0%
!!! TTCAATTATTTCTAAGTTAT+TGG + chr2_1:65647642-65647661 Msa0218470:intron 15.0%
!!! TCAATTATTTCTAAGTTATT+GGG + chr2_1:65647643-65647662 Msa0218470:intron 15.0%
!!! GAGAATATTTTATTGTTTTT+TGG + chr2_1:65648827-65648846 Msa0218470:three_prime_UTR 15.0%
!!! TATCCATAATGTTATTTTTT+AGG + chr2_1:65648887-65648906 Msa0218470:three_prime_UTR 15.0%
!! TGAATCTATTTGAAGAATAA+TGG - chr2_1:65643626-65643645 None:intergenic 20.0%
!! TAAATCAAAACAATGAAAAG+GGG - chr2_1:65643911-65643930 None:intergenic 20.0%
!!! ATTATTGAGTTTAGTGTTTT+TGG + chr2_1:65643970-65643989 Msa0218470:intron 20.0%
!!! TTATTGAGTTTAGTGTTTTT+GGG + chr2_1:65643971-65643990 Msa0218470:intron 20.0%
!!! ATGCTTTTTCTTGTTTTATA+TGG + chr2_1:65644044-65644063 Msa0218470:intron 20.0%
!! TTGAAACTAATATAAGGAAT+AGG + chr2_1:65644082-65644101 Msa0218470:intron 20.0%
!! TCATATATATTGTGTGTTAT+TGG + chr2_1:65644574-65644593 Msa0218470:intron 20.0%
!!! TTTATTTTGAAGTTCAAAAC+AGG - chr2_1:65645696-65645715 None:intergenic 20.0%
!! TTGTTTATATATGTTGTCTT+AGG + chr2_1:65645748-65645767 Msa0218470:intron 20.0%
!! GAAAAATAAGAAACATTTAG+AGG + chr2_1:65645786-65645805 Msa0218470:intron 20.0%
!!! ACATTTGTTTGTTAAAAAGT+TGG + chr2_1:65645811-65645830 Msa0218470:intron 20.0%
!!! AATTCTAAGACAAACTATTT+TGG - chr2_1:65645868-65645887 None:intergenic 20.0%
!!! AAATAGTTTGTCTTAGAATT+TGG + chr2_1:65645868-65645887 Msa0218470:intron 20.0%
!!! AATAGTTTGTCTTAGAATTT+GGG + chr2_1:65645869-65645888 Msa0218470:intron 20.0%
!! CTAAAAATATGTCTATAAGT+GGG - chr2_1:65645942-65645961 None:intergenic 20.0%
!! AAGTTATTAGTAAAAAAACG+TGG - chr2_1:65646463-65646482 None:intergenic 20.0%
!!! ATAAAGTGAAGACATTTTTT+AGG + chr2_1:65646584-65646603 Msa0218470:intron 20.0%
!! ATTATATAAACAAACTGACT+AGG + chr2_1:65646617-65646636 Msa0218470:intron 20.0%
!! CTTTATAACTCAATATATCT+AGG + chr2_1:65647012-65647031 Msa0218470:intron 20.0%
!!! GCCTATACTTTTTTTTTATT+GGG + chr2_1:65647587-65647606 Msa0218470:intron 20.0%
!!! CCTATACTTTTTTTTTATTG+GGG + chr2_1:65647588-65647607 Msa0218470:intron 20.0%
!!! CTATACTTTTTTTTTATTGG+GGG + chr2_1:65647589-65647608 Msa0218470:intron 20.0%
!!! CAATTATTTCTAAGTTATTG+GGG + chr2_1:65647644-65647663 Msa0218470:intron 20.0%
!!! AATTATTTCTAAGTTATTGG+GGG + chr2_1:65647645-65647664 Msa0218470:intron 20.0%
!!! ATCAATATGCAATATTTCTA+AGG - chr2_1:65647686-65647705 None:intergenic 20.0%
!!! GATTTTAAAATTTACTCTTC+AGG + chr2_1:65647790-65647809 Msa0218470:intron 20.0%
!! AGGATAATATGTATCTATAA+TGG - chr2_1:65647995-65648014 None:intergenic 20.0%
!!! AAATAATTGTTCAAGTTTTG+AGG - chr2_1:65648103-65648122 None:intergenic 20.0%
!!! TTTTATATGGTAAGTTTTGA+TGG + chr2_1:65648574-65648593 Msa0218470:three_prime_UTR 20.0%
!! ACTCCTAAAAAATAACATTA+TGG - chr2_1:65648893-65648912 None:intergenic 20.0%
! ATCTATTTGAAGAATAATGG+TGG - chr2_1:65643623-65643642 None:intergenic 25.0%
! ATTAAGCTTCAAACTAGTAT+TGG - chr2_1:65643681-65643700 None:intergenic 25.0%
! TCGAAACATGTAATAATTTG+AGG + chr2_1:65644166-65644185 Msa0218470:intron 25.0%
! TTTAATGTAACTACAAGTCT+CGG + chr2_1:65644200-65644219 Msa0218470:intron 25.0%
! TCTCAAATTATTAGCTATGT+CGG - chr2_1:65644336-65644355 None:intergenic 25.0%
! ATTGAAAACTCTACTAACAA+TGG + chr2_1:65644676-65644695 Msa0218470:intron 25.0%
! TTGAAAACTCTACTAACAAT+GGG + chr2_1:65644677-65644696 Msa0218470:intron 25.0%
! AAACATGATAAAAGTTCGAA+TGG + chr2_1:65645164-65645183 Msa0218470:CDS 25.0%
! GGTAAAATTGATAAGTTATG+TGG + chr2_1:65645842-65645861 Msa0218470:intron 25.0%
!! ATAGTTTGTCTTAGAATTTG+GGG + chr2_1:65645870-65645889 Msa0218470:intron 25.0%
! CTAACTTAAAACTACAAAAC+CGG + chr2_1:65645895-65645914 Msa0218470:intron 25.0%
! CCTAAAAATATGTCTATAAG+TGG - chr2_1:65645943-65645962 None:intergenic 25.0%
!! CCACTTATAGACATATTTTT+AGG + chr2_1:65645940-65645959 Msa0218470:intron 25.0%
!!! TCTGATACCATTTTAGAATT+TGG + chr2_1:65646074-65646093 Msa0218470:intron 25.0%
!!! CTGATACCATTTTAGAATTT+GGG + chr2_1:65646075-65646094 Msa0218470:intron 25.0%
!! ACTAGTTTGAGATATTAGTA+AGG + chr2_1:65646104-65646123 Msa0218470:intron 25.0%
!! TTTTTGATCTAGTAAACATG+AGG + chr2_1:65646148-65646167 Msa0218470:intron 25.0%
!! TTTTGATCTAGTAAACATGA+GGG + chr2_1:65646149-65646168 Msa0218470:intron 25.0%
! AATCTAAACACAGTGAATTT+AGG - chr2_1:65646235-65646254 None:intergenic 25.0%
!!! TTCATGCTTTTGAGTTATAT+AGG + chr2_1:65646290-65646309 Msa0218470:intron 25.0%
!! CATAAGATACTTTTCCAAAA+GGG - chr2_1:65646373-65646392 None:intergenic 25.0%
!!! TTGAACTTGTTTTTGTTTCT+TGG + chr2_1:65646657-65646676 Msa0218470:intron 25.0%
! AAATTTACTAAAACTCAGAC+TGG - chr2_1:65646751-65646770 None:intergenic 25.0%
!! GTAAATTTTCACAATCTTTC+TGG + chr2_1:65646763-65646782 Msa0218470:intron 25.0%
!!! AGATTGAGTTATTTTAGAAG+AGG + chr2_1:65646845-65646864 Msa0218470:intron 25.0%
!! ACTGTGTATTTCATTTTACA+TGG - chr2_1:65647051-65647070 None:intergenic 25.0%
! GTACTCAAAAAACATACAAT+CGG - chr2_1:65647091-65647110 None:intergenic 25.0%
! ATCTCAATATTATCAAGATC+TGG + chr2_1:65647565-65647584 Msa0218470:intron 25.0%
!!! GGCCTATACTTTTTTTTTAT+TGG + chr2_1:65647586-65647605 Msa0218470:intron 25.0%
!! CCCCAATAAAAAAAAAGTAT+AGG - chr2_1:65647591-65647610 None:intergenic 25.0%
! GAAATAATTGAACTGTACAA+TGG - chr2_1:65647634-65647653 None:intergenic 25.0%
!! GCAATATTTCTAAGGAAATA+AGG - chr2_1:65647678-65647697 None:intergenic 25.0%
! CTTACCATATAAAAAGTAAC+AGG - chr2_1:65648568-65648587 None:intergenic 25.0%
! TTATAAGCATTATGTGCAAA+TGG + chr2_1:65648631-65648650 Msa0218470:three_prime_UTR 25.0%
! TATAAGCATTATGTGCAAAT+GGG + chr2_1:65648632-65648651 Msa0218470:three_prime_UTR 25.0%
!!! TTTTTGAGTTGTGTTTGGTT+TGG - chr2_1:65643525-65643544 None:intergenic 30.0%
TTCAGTGAATGGGAAAATTA+GGG - chr2_1:65643548-65643567 None:intergenic 30.0%
ATTCAGTGAATGGGAAAATT+AGG - chr2_1:65643549-65643568 None:intergenic 30.0%
TATTTGAAGAATAATGGTGG+TGG - chr2_1:65643620-65643639 None:intergenic 30.0%
! ATTGGTGACACTTTCAAAAA+TGG + chr2_1:65643803-65643822 Msa0218470:CDS 30.0%
! TTGGTGACACTTTCAAAAAT+GGG + chr2_1:65643804-65643823 Msa0218470:CDS 30.0%
!!! TTAGTGTTTTTGGGTTATGA+AGG + chr2_1:65643980-65643999 Msa0218470:intron 30.0%
!!! TAGTGTTTTTGGGTTATGAA+GGG + chr2_1:65643981-65644000 Msa0218470:intron 30.0%
TTCAGTGTAATTACAAGTGT+CGG + chr2_1:65644367-65644386 Msa0218470:intron 30.0%
GAAACTAGAAAGAGAATCAA+GGG - chr2_1:65644542-65644561 None:intergenic 30.0%
AGAAACTAGAAAGAGAATCA+AGG - chr2_1:65644543-65644562 None:intergenic 30.0%
!! CTCTTTCTAGTTTCTTTAGT+TGG + chr2_1:65644548-65644567 Msa0218470:intron 30.0%
!! TTTCTAGTTTCTTTAGTTGG+TGG + chr2_1:65644551-65644570 Msa0218470:intron 30.0%
! GTTATTGGAGTTCTTTTCAT+TGG + chr2_1:65644589-65644608 Msa0218470:intron 30.0%
TGAAAACTCTACTAACAATG+GGG + chr2_1:65644678-65644697 Msa0218470:intron 30.0%
! AGCACTCTTCTGAATTTTTA+AGG - chr2_1:65644730-65644749 None:intergenic 30.0%
ATTCTCAAACAAATTGCTGA+AGG + chr2_1:65644786-65644805 Msa0218470:CDS 30.0%
TTCTCAAACAAATTGCTGAA+GGG + chr2_1:65644787-65644806 Msa0218470:CDS 30.0%
! TGTATGGTTTTTGAATTCCT+TGG + chr2_1:65644885-65644904 Msa0218470:CDS 30.0%
! GTATGGTTTTTGAATTCCTT+GGG + chr2_1:65644886-65644905 Msa0218470:CDS 30.0%
! TATGGTTTTTGAATTCCTTG+GGG + chr2_1:65644887-65644906 Msa0218470:CDS 30.0%
ATCAAGTATAGTGATTATCG+TGG + chr2_1:65644927-65644946 Msa0218470:CDS 30.0%
TAGCAAATTTCTTTGACCAT+GGG - chr2_1:65644963-65644982 None:intergenic 30.0%
!!! AGAAATTTGCTACCATGTTT+TGG + chr2_1:65644971-65644990 Msa0218470:CDS 30.0%
!!! GATTTTCTAGGATCTTTAGA+TGG - chr2_1:65645083-65645102 None:intergenic 30.0%
TCTAAAGATCCTAGAAAATC+AGG + chr2_1:65645083-65645102 Msa0218470:CDS 30.0%
! CGAACTTTTATCATGTTTTG+TGG - chr2_1:65645162-65645181 None:intergenic 30.0%
TTACTAGAATCATCTTGTTC+AGG - chr2_1:65645287-65645306 None:intergenic 30.0%
GTGAAACCAATTGTAGAAAA+TGG + chr2_1:65645311-65645330 Msa0218470:CDS 30.0%
TTACAAATGATATCCAGACT+AGG + chr2_1:65645522-65645541 Msa0218470:CDS 30.0%
GTTAAAAAGTTGGATCAAGT+TGG + chr2_1:65645821-65645840 Msa0218470:intron 30.0%
!!! CGGTTTTGTAGTTTTAAGTT+AGG - chr2_1:65645897-65645916 None:intergenic 30.0%
! CCTTAACCCAAATTCTAAAA+TGG - chr2_1:65646084-65646103 None:intergenic 30.0%
!!! CCATTTTAGAATTTGGGTTA+AGG + chr2_1:65646081-65646100 Msa0218470:intron 30.0%
GTTTACTAGATCAAAAAGCA+AGG - chr2_1:65646145-65646164 None:intergenic 30.0%
! ATTTCTATCTTTTGCCCTTT+TGG + chr2_1:65646356-65646375 Msa0218470:intron 30.0%
! CCATAAGATACTTTTCCAAA+AGG - chr2_1:65646374-65646393 None:intergenic 30.0%
!!! CCTTTTGGAAAAGTATCTTA+TGG + chr2_1:65646371-65646390 Msa0218470:intron 30.0%
AACACAAGACAATTTCTGAT+TGG - chr2_1:65646425-65646444 None:intergenic 30.0%
CAGAAATTGTCTTGTGTTAA+TGG + chr2_1:65646427-65646446 Msa0218470:intron 30.0%
GGTCATTGTGATTTAATCTA+TGG + chr2_1:65646529-65646548 Msa0218470:intron 30.0%
! TGAAAAGCGAAAAGTTTTCA+TGG - chr2_1:65646894-65646913 None:intergenic 30.0%
! ATTTCATTTTACATGGCAGA+AGG - chr2_1:65647044-65647063 None:intergenic 30.0%
! ATTTTGTCGTCAGTAGTATA+GGG - chr2_1:65647231-65647250 None:intergenic 30.0%
! TATTTTGTCGTCAGTAGTAT+AGG - chr2_1:65647232-65647251 None:intergenic 30.0%
TTGAGATATTAGTAGAGTCA+AGG - chr2_1:65647552-65647571 None:intergenic 30.0%
! TGTATTTCAGACTTTTCAGT+GGG - chr2_1:65647725-65647744 None:intergenic 30.0%
GGAGTAACTGAATAATATGT+GGG - chr2_1:65647974-65647993 None:intergenic 30.0%
TGGAGTAACTGAATAATATG+TGG - chr2_1:65647975-65647994 None:intergenic 30.0%
AGAAAGAGAGTAGATACAAT+AGG - chr2_1:65648022-65648041 None:intergenic 30.0%
! TATTTTGTTCAGATTGCTCT+TGG + chr2_1:65648118-65648137 Msa0218470:intron 30.0%
TTTCCAATCTACAAAACCAT+CGG + chr2_1:65648513-65648532 Msa0218470:CDS 30.0%
!!! GCAACCTGTTACTTTTTATA+TGG + chr2_1:65648561-65648580 Msa0218470:three_prime_UTR 30.0%
TTTACAAGAAGTGAAAGAAG+TGG - chr2_1:65648744-65648763 None:intergenic 30.0%
! TTCTTGTAAAAGTGTGTAGA+AGG + chr2_1:65648754-65648773 Msa0218470:three_prime_UTR 30.0%
GATAATGAGCATCTAATCTA+GGG - chr2_1:65648871-65648890 None:intergenic 30.0%
!!! TTGTTGTTTTTGTTGTTGCC+GGG - chr2_1:65643499-65643518 None:intergenic 35.0%
!!! CTTGTTGTTTTTGTTGTTGC+CGG - chr2_1:65643500-65643519 None:intergenic 35.0%
!!! TAGGGTTTTTGAGTTGTGTT+TGG - chr2_1:65643530-65643549 None:intergenic 35.0%
AAACCTCGAATTCAGTGAAT+GGG - chr2_1:65643558-65643577 None:intergenic 35.0%
AAAACCTCGAATTCAGTGAA+TGG - chr2_1:65643559-65643578 None:intergenic 35.0%
TATGTTGTTCAGAGTAAGCT+TGG + chr2_1:65643830-65643849 Msa0218470:CDS 35.0%
!!! AGTGTTTTTGGGTTATGAAG+GGG + chr2_1:65643982-65644001 Msa0218470:intron 35.0%
TAGGTTGTGTGTGTTTAGTT+TGG + chr2_1:65644474-65644493 Msa0218470:intron 35.0%
! ACTATGTTTGTTGAAAGCCT+AGG + chr2_1:65644630-65644649 Msa0218470:intron 35.0%
TCTCAAACAAATTGCTGAAG+GGG + chr2_1:65644788-65644807 Msa0218470:CDS 35.0%
! GAAATGTGTTGTGAAGCTTT+TGG + chr2_1:65644824-65644843 Msa0218470:CDS 35.0%
ATACAAACATGCTGACCATT+AGG - chr2_1:65644870-65644889 None:intergenic 35.0%
TAATGGTCAGCATGTTTGTA+TGG + chr2_1:65644869-65644888 Msa0218470:CDS 35.0%
AATTTCTTTGACCATGGGAA+GGG - chr2_1:65644958-65644977 None:intergenic 35.0%
AAATTTCTTTGACCATGGGA+AGG - chr2_1:65644959-65644978 None:intergenic 35.0%
GTAGCAAATTTCTTTGACCA+TGG - chr2_1:65644964-65644983 None:intergenic 35.0%
!!! AATTTGCTACCATGTTTTGG+TGG + chr2_1:65644974-65644993 Msa0218470:CDS 35.0%
!!! ATTTGCTACCATGTTTTGGT+GGG + chr2_1:65644975-65644994 Msa0218470:CDS 35.0%
! GAGACAAGCAAAACATTTTC+TGG - chr2_1:65645050-65645069 None:intergenic 35.0%
GGATCTTTAGATGGATCTAT+TGG - chr2_1:65645074-65645093 None:intergenic 35.0%
! TAGTGGTTGGAAGTATAAGT+GGG - chr2_1:65645112-65645131 None:intergenic 35.0%
! TTAGTGGTTGGAAGTATAAG+TGG - chr2_1:65645113-65645132 None:intergenic 35.0%
!!! CATCTTCTTTTTCTGGTTCT+TGG - chr2_1:65645198-65645217 None:intergenic 35.0%
AGAACCAGAAAAAGAAGATG+CGG + chr2_1:65645198-65645217 Msa0218470:CDS 35.0%
! TTTTCCGCATCTTCTTTTTC+TGG - chr2_1:65645205-65645224 None:intergenic 35.0%
GAAAAAGAAGATGCGGAAAA+AGG + chr2_1:65645205-65645224 Msa0218470:CDS 35.0%
! CCTTCACCATTTTCTACAAT+TGG - chr2_1:65645320-65645339 None:intergenic 35.0%
CCAATTGTAGAAAATGGTGA+AGG + chr2_1:65645317-65645336 Msa0218470:CDS 35.0%
TCTTTACTTGTGGGACTATT+AGG - chr2_1:65645347-65645366 None:intergenic 35.0%
! GCTGATTCATCTTTACTTGT+GGG - chr2_1:65645356-65645375 None:intergenic 35.0%
!! TGCTGATTCATCTTTACTTG+TGG - chr2_1:65645357-65645376 None:intergenic 35.0%
!! AGCAATGACTTCTGAAACTA+AGG + chr2_1:65645373-65645392 Msa0218470:CDS 35.0%
!! TGGATTTTGGAAATGCTTGT+TGG + chr2_1:65645486-65645505 Msa0218470:CDS 35.0%
GAGATATTAGTAAGGACGTT+AGG + chr2_1:65646112-65646131 Msa0218470:intron 35.0%
! AAACATGAGGGAAGTTTTTG+TGG + chr2_1:65646161-65646180 Msa0218470:intron 35.0%
! TGGAAGCTATTTGACTTTGA+TGG + chr2_1:65646197-65646216 Msa0218470:intron 35.0%
! GGAAGCTATTTGACTTTGAT+GGG + chr2_1:65646198-65646217 Msa0218470:intron 35.0%
TGGAATATTATGAGCGTGTT+TGG + chr2_1:65646677-65646696 Msa0218470:intron 35.0%
ATATTATGAGCGTGTTTGGA+AGG + chr2_1:65646681-65646700 Msa0218470:intron 35.0%
TATTATGAGCGTGTTTGGAA+GGG + chr2_1:65646682-65646701 Msa0218470:intron 35.0%
AACTCAATATATCTAGGCAG+AGG + chr2_1:65647018-65647037 Msa0218470:intron 35.0%
AGTAGTATAGGGAAGTCTAA+GGG - chr2_1:65647220-65647239 None:intergenic 35.0%
CCTATAACGAACTTTATCGT+GGG - chr2_1:65647264-65647283 None:intergenic 35.0%
ACCTATAACGAACTTTATCG+TGG - chr2_1:65647265-65647284 None:intergenic 35.0%
! ACATGCTTACGTAGCAATTT+TGG + chr2_1:65647434-65647453 Msa0218470:intron 35.0%
! CATGCTTACGTAGCAATTTT+GGG + chr2_1:65647435-65647454 Msa0218470:intron 35.0%
! ATGCTTACGTAGCAATTTTG+GGG + chr2_1:65647436-65647455 Msa0218470:intron 35.0%
! TCTAGAGTAAACCACCAAAT+TGG + chr2_1:65647494-65647513 Msa0218470:intron 35.0%
TACAAAGACATGGACCAATT+TGG - chr2_1:65647511-65647530 None:intergenic 35.0%
GAGAGTGAATTACAAAGACA+TGG - chr2_1:65647521-65647540 None:intergenic 35.0%
! CTGTATTTCAGACTTTTCAG+TGG - chr2_1:65647726-65647745 None:intergenic 35.0%
! AAAAGTCTGAAATACAGCTG+TGG + chr2_1:65647729-65647748 Msa0218470:intron 35.0%
ATTTACTCTTCAGGATCATC+TGG + chr2_1:65647799-65647818 Msa0218470:intron 35.0%
TTTGCATGTTGATATGCACA+AGG + chr2_1:65647912-65647931 Msa0218470:intron 35.0%
GAGTAGATACAATAGGATCA+AGG - chr2_1:65648015-65648034 None:intergenic 35.0%
AGATCTATTGAAAAAGTCCC+GGG - chr2_1:65648155-65648174 None:intergenic 35.0%
CAGATCTATTGAAAAAGTCC+CGG - chr2_1:65648156-65648175 None:intergenic 35.0%
!! GCCTATTACTAAGGTTTTGA+CGG + chr2_1:65648210-65648229 Msa0218470:CDS 35.0%
TCCGTCAAAACCTTAGTAAT+AGG - chr2_1:65648214-65648233 None:intergenic 35.0%
TCAGGAACAAAGTCAAGTAA+CGG - chr2_1:65648289-65648308 None:intergenic 35.0%
ATCCATGCTGATGCTATTAA+CGG + chr2_1:65648391-65648410 Msa0218470:CDS 35.0%
AGAAAAGCCTGGAAAGTTAA+GGG + chr2_1:65648414-65648433 Msa0218470:CDS 35.0%
TGGAAATCTTTGAGTGTCTT+TGG - chr2_1:65648499-65648518 None:intergenic 35.0%
TGGCATAACTCCATTGTAAT+AGG - chr2_1:65648724-65648743 None:intergenic 35.0%
GGATAATGAGCATCTAATCT+AGG - chr2_1:65648872-65648891 None:intergenic 35.0%
TTTCCCATTCACTGAATTCG+AGG + chr2_1:65643552-65643571 Msa0218470:five_prime_UTR 40.0%
TTGGAGTGAAATTGAGGGAA+AGG - chr2_1:65643582-65643601 None:intergenic 40.0%
!! TTGGGTTGGAGTGAAATTGA+GGG - chr2_1:65643587-65643606 None:intergenic 40.0%
!! ATTGGGTTGGAGTGAAATTG+AGG - chr2_1:65643588-65643607 None:intergenic 40.0%
GCTTAATCCTTCGACTTCAA+TGG + chr2_1:65643694-65643713 Msa0218470:exon 40.0%
TAATCCTTCGACTTCAATGG+CGG + chr2_1:65643697-65643716 Msa0218470:exon 40.0%
AGATGCGAGTGATTACAGTT+CGG + chr2_1:65643730-65643749 Msa0218470:CDS 40.0%
GATTACAGTTCGGAAGATGA+AGG + chr2_1:65643740-65643759 Msa0218470:CDS 40.0%
!!! GGGGTCATTTTTCAACTGTT+TGG + chr2_1:65643855-65643874 Msa0218470:CDS 40.0%
ACGAAGTAGCGACATTTACA+CGG + chr2_1:65644120-65644139 Msa0218470:intron 40.0%
ATTTACACGGACACCAGATA+TGG + chr2_1:65644133-65644152 Msa0218470:intron 40.0%
TATGTAGCACCAATGAAGCA+CGG - chr2_1:65644456-65644475 None:intergenic 40.0%
TTGGACCACTTTAAGCATTC+AGG + chr2_1:65644843-65644862 Msa0218470:CDS 40.0%
TGGACCACTTTAAGCATTCA+GGG + chr2_1:65644844-65644863 Msa0218470:CDS 40.0%
TTTAAGCATTCAGGGCCTAA+TGG + chr2_1:65644852-65644871 Msa0218470:CDS 40.0%
ATTTCTTTGACCATGGGAAG+GGG - chr2_1:65644957-65644976 None:intergenic 40.0%
AATCCAAACCCACCAAAACA+TGG - chr2_1:65644986-65645005 None:intergenic 40.0%
ACAGTCTTGACTTTAGTGGT+TGG - chr2_1:65645125-65645144 None:intergenic 40.0%
GGATACAGTCTTGACTTTAG+TGG - chr2_1:65645129-65645148 None:intergenic 40.0%
GTCAAGACTGTATCCAAGAA+CGG + chr2_1:65645134-65645153 Msa0218470:CDS 40.0%
TCAAGACTGTATCCAAGAAC+GGG + chr2_1:65645135-65645154 Msa0218470:CDS 40.0%
GAAACTAAGGATGTTCCACA+AGG + chr2_1:65645386-65645405 Msa0218470:CDS 40.0%
TGATCTTAAGTGCAAGCTTG+TGG + chr2_1:65645466-65645485 Msa0218470:CDS 40.0%
! AAGTGCAAGCTTGTGGATTT+TGG + chr2_1:65645473-65645492 Msa0218470:CDS 40.0%
TTAGAACCTAGAAGAACCTC+AGG - chr2_1:65645560-65645579 None:intergenic 40.0%
!! AGGTTCTAAATACTCGACTC+CGG + chr2_1:65645571-65645590 Msa0218470:CDS 40.0%
CTCAAAGCATATGCAAGCAA+AGG - chr2_1:65645609-65645628 None:intergenic 40.0%
ATCAAAAAGAACATCGCCAG+TGG - chr2_1:65645636-65645655 None:intergenic 40.0%
! GTTCTTTTTGATCCTCACAG+TGG + chr2_1:65645644-65645663 Msa0218470:CDS 40.0%
! TCATAGTTTTCACCACTGTG+AGG - chr2_1:65645659-65645678 None:intergenic 40.0%
ACAGTGGTGAAAACTATGAC+AGG + chr2_1:65645660-65645679 Msa0218470:CDS 40.0%
CAGTGGTGAAAACTATGACA+GGG + chr2_1:65645661-65645680 Msa0218470:CDS 40.0%
TGAAAACTATGACAGGGATG+AGG + chr2_1:65645667-65645686 Msa0218470:CDS 40.0%
!! AACTACAAAACCGGCTTGTA+AGG + chr2_1:65645904-65645923 Msa0218470:intron 40.0%
!! TAAAAGTACCACATCGGATG+AGG - chr2_1:65645971-65645990 None:intergenic 40.0%
!! GGGTGTTAAAAGTACCACAT+CGG - chr2_1:65645977-65645996 None:intergenic 40.0%
!!! TTTGTGGTGATGGCATGTTT+TGG + chr2_1:65646177-65646196 Msa0218470:intron 40.0%
CAGTAGTATAGGGAAGTCTA+AGG - chr2_1:65647221-65647240 None:intergenic 40.0%
CCCACGATAAAGTTCGTTAT+AGG + chr2_1:65647261-65647280 Msa0218470:intron 40.0%
TTTCGTCTACTCCTTGTTAC+TGG + chr2_1:65647313-65647332 Msa0218470:intron 40.0%
TACTCCTTGTTACTGGAGAT+AGG + chr2_1:65647320-65647339 Msa0218470:intron 40.0%
TGTTCCTATCTCCAGTAACA+AGG - chr2_1:65647327-65647346 None:intergenic 40.0%
GTTACTGGAGATAGGAACAA+AGG + chr2_1:65647328-65647347 Msa0218470:intron 40.0%
GGAGATAGGAACAAAGGTTA+AGG + chr2_1:65647334-65647353 Msa0218470:intron 40.0%
AAAGACATGGACCAATTTGG+TGG - chr2_1:65647508-65647527 None:intergenic 40.0%
TTTGTTCAGATTGCTCTTGG+CGG + chr2_1:65648121-65648140 Msa0218470:intron 40.0%
!!! CGGGACTTTTTCAATAGATC+TGG + chr2_1:65648154-65648173 Msa0218470:CDS 40.0%
! CAAAGTCAAGTAACGGAACA+AGG - chr2_1:65648282-65648301 None:intergenic 40.0%
TGTTCCTGAAAAGAGACCAA+CGG + chr2_1:65648300-65648319 Msa0218470:CDS 40.0%
GAGAAAAGCCTGGAAAGTTA+AGG + chr2_1:65648413-65648432 Msa0218470:CDS 40.0%
! TCCTTTTCCCTTAACTTTCC+AGG - chr2_1:65648424-65648443 None:intergenic 40.0%
ATGGGGAATATGACCATTGA+TGG + chr2_1:65648469-65648488 Msa0218470:CDS 40.0%
!! TGTCTTTGGAGTTCCATCAA+TGG - chr2_1:65648485-65648504 None:intergenic 40.0%
!! TGGTAAGTTTTGATGGTCCT+TGG + chr2_1:65648581-65648600 Msa0218470:three_prime_UTR 40.0%
ACATTGAACATCATGCTCCA+AGG - chr2_1:65648601-65648620 None:intergenic 40.0%
GCAAATGGGTCATACTTAAG+AGG + chr2_1:65648646-65648665 Msa0218470:three_prime_UTR 40.0%
GGGTCATACTTAAGAGGTTA+TGG + chr2_1:65648652-65648671 Msa0218470:three_prime_UTR 40.0%
TGGTTTGAGAAACCCTTCAT+AGG + chr2_1:65648672-65648691 Msa0218470:three_prime_UTR 40.0%
GGTTTGAGAAACCCTTCATA+GGG + chr2_1:65648673-65648692 Msa0218470:three_prime_UTR 40.0%
TGGATGGAAGCCTATTACAA+TGG + chr2_1:65648711-65648730 Msa0218470:three_prime_UTR 40.0%
GTGGATGAGAAAGATTGGGT+TGG - chr2_1:65643601-65643620 None:intergenic 45.0%
!! GGTGGTGGATGAGAAAGATT+GGG - chr2_1:65643605-65643624 None:intergenic 45.0%
!! TGGTGGTGGATGAGAAAGAT+TGG - chr2_1:65643606-65643625 None:intergenic 45.0%
TTCGGAAGATGAAGGAACTG+AGG + chr2_1:65643748-65643767 Msa0218470:CDS 45.0%
GGAACTGAGGATTACAAACG+AGG + chr2_1:65643761-65643780 Msa0218470:CDS 45.0%
ACTGAGGATTACAAACGAGG+TGG + chr2_1:65643764-65643783 Msa0218470:CDS 45.0%
CAAACGAGGTGGTTATCATG+CGG + chr2_1:65643775-65643794 Msa0218470:CDS 45.0%
GGTTATCATGCGGTTCAGAT+TGG + chr2_1:65643785-65643804 Msa0218470:CDS 45.0%
TTGTTCAGAGTAAGCTTGGC+TGG + chr2_1:65643834-65643853 Msa0218470:CDS 45.0%
TGTTCAGAGTAAGCTTGGCT+GGG + chr2_1:65643835-65643854 Msa0218470:CDS 45.0%
! TTTCAACTGTTTGGCTCGCT+TGG + chr2_1:65643864-65643883 Msa0218470:CDS 45.0%
! TTCAACTGTTTGGCTCGCTT+GGG + chr2_1:65643865-65643884 Msa0218470:CDS 45.0%
CGCTTGGGATACTCAGAAAT+TGG + chr2_1:65643880-65643899 Msa0218470:CDS 45.0%
!!! GTTTTTGGGTTATGAAGGGG+TGG + chr2_1:65643985-65644004 Msa0218470:intron 45.0%
CGACATGTCATTGCCATATC+TGG - chr2_1:65644149-65644168 None:intergenic 45.0%
GACCAATGTCCAACACATGT+CGG - chr2_1:65644240-65644259 None:intergenic 45.0%
GACATTGGTCACACCTTTGA+TGG + chr2_1:65644250-65644269 Msa0218470:intron 45.0%
! CACACCTTTGATGGAAGTGT+TGG + chr2_1:65644259-65644278 Msa0218470:intron 45.0%
GTGCCTATGAAGCATGGATA+CGG + chr2_1:65644281-65644300 Msa0218470:intron 45.0%
TGTCCGTATCCATGCTTCAT+AGG - chr2_1:65644287-65644306 None:intergenic 45.0%
!! TACAAGTGTCGGTGTTGTGT+CGG + chr2_1:65644378-65644397 Msa0218470:intron 45.0%
!! GTGCTTCATTGGTGCTACAT+AGG + chr2_1:65644455-65644474 Msa0218470:intron 45.0%
TCAGAGCATGTGTGTTACCT+AGG - chr2_1:65644650-65644669 None:intergenic 45.0%
AATTGCTGAAGGGGATCTAG+AGG + chr2_1:65644797-65644816 Msa0218470:CDS 45.0%
TAGGCCCTGAATGCTTAAAG+TGG - chr2_1:65644851-65644870 None:intergenic 45.0%
GTGTAAGAAGATTGTCCCCA+AGG - chr2_1:65644905-65644924 None:intergenic 45.0%
!!! CTACCATGTTTTGGTGGGTT+TGG + chr2_1:65644980-65644999 Msa0218470:CDS 45.0%
! AGTGGGACTCCTGATTTTCT+AGG - chr2_1:65645095-65645114 None:intergenic 45.0%
! ATGTTTTGTGGTCCCGTTCT+TGG - chr2_1:65645150-65645169 None:intergenic 45.0%
GGCTAAAAAAGCAGCTCAGA+AGG + chr2_1:65645226-65645245 Msa0218470:CDS 45.0%
CTAGAAACCTGACTTCCTTG+TGG - chr2_1:65645404-65645423 None:intergenic 45.0%
CACAAGGAAGTCAGGTTTCT+AGG + chr2_1:65645402-65645421 Msa0218470:CDS 45.0%
GACATCTATACTGCCTAGTC+TGG - chr2_1:65645538-65645557 None:intergenic 45.0%
TAGGCAGTATAGATGTCCTG+AGG + chr2_1:65645541-65645560 Msa0218470:CDS 45.0%
AGATGTCCTGAGGTTCTTCT+AGG + chr2_1:65645551-65645570 Msa0218470:CDS 45.0%
! ATATGCTTTGAGCTTGCCAC+TGG + chr2_1:65645617-65645636 Msa0218470:CDS 45.0%
!! TACAAAACCGGCTTGTAAGG+TGG + chr2_1:65645907-65645926 Msa0218470:intron 45.0%
!! ACAAAACCGGCTTGTAAGGT+GGG + chr2_1:65645908-65645927 Msa0218470:intron 45.0%
! GAGGGAAGTTTTTGTGGTGA+TGG + chr2_1:65646167-65646186 Msa0218470:intron 45.0%
TGGTTCGTCTAGAAACCTAG+CGG + chr2_1:65646391-65646410 Msa0218470:intron 45.0%
TGTGTTTGGATGGAGGGTTT+AGG - chr2_1:65647197-65647216 None:intergenic 45.0%
! TAAGGGTGTGTTTGGATGGA+GGG - chr2_1:65647203-65647222 None:intergenic 45.0%
! AGTCTAAGGGTGTGTTTGGA+TGG - chr2_1:65647207-65647226 None:intergenic 45.0%
!! GGATCATCTGGCATTGATGA+TGG + chr2_1:65647811-65647830 Msa0218470:intron 45.0%
!! GCATTGATGATGGAGCTTCT+CGG + chr2_1:65647821-65647840 Msa0218470:CDS 45.0%
!! CATTGATGATGGAGCTTCTC+GGG + chr2_1:65647822-65647841 Msa0218470:CDS 45.0%
!! ATTGATGATGGAGCTTCTCG+GGG + chr2_1:65647823-65647842 Msa0218470:CDS 45.0%
TGAAAAAGTCCCGGGAATAG+CGG - chr2_1:65648147-65648166 None:intergenic 45.0%
! GTGATTTGAGACACATTCGC+CGG + chr2_1:65648176-65648195 Msa0218470:CDS 45.0%
TGGATGAGTAAGACACTGAG+CGG - chr2_1:65648326-65648345 None:intergenic 45.0%
CTCAGTGTCTTACTCATCCA+TGG + chr2_1:65648326-65648345 Msa0218470:CDS 45.0%
CTCCGTTAATAGCATCAGCA+TGG - chr2_1:65648396-65648415 None:intergenic 45.0%
GCTATTAACGGAGAAAAGCC+TGG + chr2_1:65648403-65648422 Msa0218470:CDS 45.0%
GCCTGGAAAGTTAAGGGAAA+AGG + chr2_1:65648420-65648439 Msa0218470:CDS 45.0%
GAGGCTGTGGAAGTTAGTAT+GGG + chr2_1:65648451-65648470 Msa0218470:CDS 45.0%
AGGCTGTGGAAGTTAGTATG+GGG + chr2_1:65648452-65648471 Msa0218470:CDS 45.0%
!!! ACGCCGATGGTTTTGTAGAT+TGG - chr2_1:65648519-65648538 None:intergenic 45.0%
TGAGAAACCCTTCATAGGGT+AGG + chr2_1:65648677-65648696 Msa0218470:three_prime_UTR 45.0%
GAGAAACCCTTCATAGGGTA+GGG + chr2_1:65648678-65648697 Msa0218470:three_prime_UTR 45.0%
GTGCACTCTATTGAGTGTGA+AGG - chr2_1:65648786-65648805 None:intergenic 45.0%
!!! ATGTTTTTTAATATAATTTT+TGG - chr2_1:65647290-65647309 None:intergenic 5.0%
GTTCAGAGTAAGCTTGGCTG+GGG + chr2_1:65643836-65643855 Msa0218470:CDS 50.0%
TGTCAGAGTCCGACATGTGT+TGG + chr2_1:65644228-65644247 Msa0218470:intron 50.0%
GTCCGACATGTGTTGGACAT+TGG + chr2_1:65644235-65644254 Msa0218470:intron 50.0%
GGCACCAACACTTCCATCAA+AGG - chr2_1:65644266-65644285 None:intergenic 50.0%
! GTGTTGGTGCCTATGAAGCA+TGG + chr2_1:65644275-65644294 Msa0218470:intron 50.0%
TGAAGCATGGATACGGACAC+CGG + chr2_1:65644288-65644307 Msa0218470:intron 50.0%
ACACGACACATGTCCAACAC+TGG + chr2_1:65644407-65644426 Msa0218470:intron 50.0%
CACGACACATGTCCAACACT+GGG + chr2_1:65644408-65644427 Msa0218470:intron 50.0%
GATTATGCGTGTCCCAGTGT+TGG - chr2_1:65644423-65644442 None:intergenic 50.0%
GACACGCATAATCCGAGAAG+TGG + chr2_1:65644430-65644449 Msa0218470:intron 50.0%
AATGAAGCACGGCCACTTCT+CGG - chr2_1:65644445-65644464 None:intergenic 50.0%
!! GAAGAGTGCTCAGCACTACA+CGG + chr2_1:65644740-65644759 Msa0218470:CDS 50.0%
GGATGTTCCACAAGGAAGTC+AGG + chr2_1:65645394-65645413 Msa0218470:CDS 50.0%
! GGAAGTCAGGTTTCTAGGAG+AGG + chr2_1:65645407-65645426 Msa0218470:CDS 50.0%
GCAAAGGACCACATATCTGC+CGG - chr2_1:65645593-65645612 None:intergenic 50.0%
!! CAAAACCGGCTTGTAAGGTG+GGG + chr2_1:65645909-65645928 Msa0218470:intron 50.0%
TCATTCCCCACCTTACAAGC+CGG - chr2_1:65645917-65645936 None:intergenic 50.0%
GTACCACATCGGATGAGGTA+TGG - chr2_1:65645966-65645985 None:intergenic 50.0%
CGTGATGAGTGACTCGATAG+CGG + chr2_1:65646026-65646045 Msa0218470:intron 50.0%
TGACCCAGCAGATCTCATGT+AGG + chr2_1:65646050-65646069 Msa0218470:intron 50.0%
GAGCCTACATGAGATCTGCT+GGG - chr2_1:65646056-65646075 None:intergenic 50.0%
AGAGCCTACATGAGATCTGC+TGG - chr2_1:65646057-65646076 None:intergenic 50.0%
TGATTGGCAACACTTCCGCT+AGG - chr2_1:65646409-65646428 None:intergenic 50.0%
TGGAGGGTTTAGGAGGTGAA+GGG - chr2_1:65647187-65647206 None:intergenic 50.0%
ATGGAGGGTTTAGGAGGTGA+AGG - chr2_1:65647188-65647207 None:intergenic 50.0%
GTTTGGATGGAGGGTTTAGG+AGG - chr2_1:65647194-65647213 None:intergenic 50.0%
! CTAAGGGTGTGTTTGGATGG+AGG - chr2_1:65647204-65647223 None:intergenic 50.0%
! GGGAAGTCTAAGGGTGTGTT+TGG - chr2_1:65647211-65647230 None:intergenic 50.0%
CCTAATATGCCTACCTTGCG+AGG - chr2_1:65647854-65647873 None:intergenic 50.0%
CCTCGCAAGGTAGGCATATT+AGG + chr2_1:65647851-65647870 Msa0218470:intron 50.0%
TAATAGGCCAGAACCGCAAC+CGG - chr2_1:65648198-65648217 None:intergenic 50.0%
! GCGGTTCTGGCCTATTACTA+AGG + chr2_1:65648201-65648220 Msa0218470:CDS 50.0%
ACTCATCCATGGATGAGTGC+AGG + chr2_1:65648337-65648356 Msa0218470:CDS 50.0%
GCATGGATGCTATTCACCGA+GGG - chr2_1:65648379-65648398 None:intergenic 50.0%
AGCATGGATGCTATTCACCG+AGG - chr2_1:65648380-65648399 None:intergenic 50.0%
GTTAAGGGAAAAGGACGAGC+AGG + chr2_1:65648429-65648448 Msa0218470:CDS 50.0%
GGAGGCTGTGGAAGTTAGTA+TGG + chr2_1:65648450-65648469 Msa0218470:CDS 50.0%
CTCTTGCCCTACCCTATGAA+GGG - chr2_1:65648687-65648706 None:intergenic 50.0%
TCTCTTGCCCTACCCTATGA+AGG - chr2_1:65648688-65648707 None:intergenic 50.0%
TCCTTCGACTTCAATGGCGG+AGG + chr2_1:65643700-65643719 Msa0218470:exon 55.0%
TCCTCCGCCATTGAAGTCGA+AGG - chr2_1:65643704-65643723 None:intergenic 55.0%
GTCAGTGTCTGTGTCGTGTC+CGG - chr2_1:65644310-65644329 None:intergenic 55.0%
GAGAAGTGGCCGTGCTTCAT+TGG + chr2_1:65644444-65644463 Msa0218470:intron 55.0%
TGCTCAGCACTACACGGAAG+CGG + chr2_1:65644746-65644765 Msa0218470:CDS 55.0%
TCGTGGTATTCCCCTTCCCA+TGG + chr2_1:65644944-65644963 Msa0218470:CDS 55.0%
AGCTCAGAAGGAAAGTCCCG+AGG + chr2_1:65645238-65645257 Msa0218470:CDS 55.0%
AGAATCCTCCTCTGCTGCCT+CGG - chr2_1:65645258-65645277 None:intergenic 55.0%
ACTCGACTCCGGCAGATATG+TGG + chr2_1:65645582-65645601 Msa0218470:CDS 55.0%
AGGCCATACCTCATCCGATG+TGG + chr2_1:65645960-65645979 Msa0218470:intron 55.0%
TTAACACCCTCCTCGCGTCT+AGG + chr2_1:65645988-65646007 Msa0218470:intron 55.0%
TTCAGTCCTAGACGCGAGGA+GGG - chr2_1:65645997-65646016 None:intergenic 55.0%
CGAGTCACTCATCACGCTTC+AGG - chr2_1:65646022-65646041 None:intergenic 55.0%
GGTTTAGGAGGTGAAGGGAG+GGG - chr2_1:65647182-65647201 None:intergenic 55.0%
GGGTTTAGGAGGTGAAGGGA+GGG - chr2_1:65647183-65647202 None:intergenic 55.0%
AGGGTTTAGGAGGTGAAGGG+AGG - chr2_1:65647184-65647203 None:intergenic 55.0%
! TGAGACACATTCGCCGGTTG+CGG + chr2_1:65648182-65648201 Msa0218470:CDS 55.0%
CATGGATGAGTGCAGGTCCT+CGG + chr2_1:65648344-65648363 Msa0218470:CDS 55.0%
AAGGGAAAAGGACGAGCAGG+AGG + chr2_1:65648432-65648451 Msa0218470:CDS 55.0%
TAGGGTAGGGCAAGAGAAGC+TGG + chr2_1:65648691-65648710 Msa0218470:three_prime_UTR 55.0%
GTAGGGCAAGAGAAGCTGGA+TGG + chr2_1:65648695-65648714 Msa0218470:three_prime_UTR 55.0%
GCACTACACGGAAGCGGCAA+TGG + chr2_1:65644752-65644771 Msa0218470:CDS 60.0%
GAATCCTCCTCTGCTGCCTC+GGG - chr2_1:65645257-65645276 None:intergenic 60.0%
GTTCAGTCCTAGACGCGAGG+AGG - chr2_1:65645998-65646017 None:intergenic 60.0%
GGTGTTCAGTCCTAGACGCG+AGG - chr2_1:65646001-65646020 None:intergenic 60.0%
TAGGAGGTGAAGGGAGGGGA+GGG - chr2_1:65647178-65647197 None:intergenic 60.0%
TTAGGAGGTGAAGGGAGGGG+AGG - chr2_1:65647179-65647198 None:intergenic 60.0%
! ACATTCGCCGGTTGCGGTTC+TGG + chr2_1:65648188-65648207 Msa0218470:CDS 60.0%
!! GCGGCCGTTGGTCTCTTTTC+AGG - chr2_1:65648307-65648326 None:intergenic 60.0%
GTAAGACACTGAGCGGCCGT+TGG - chr2_1:65648319-65648338 None:intergenic 60.0%
CGAGGACCTGCACTCATCCA+TGG - chr2_1:65648346-65648365 None:intergenic 60.0%
TCCTCGGACTCTTGAGCCCT+CGG + chr2_1:65648360-65648379 Msa0218470:CDS 60.0%
AAAGGACGAGCAGGAGGCTG+TGG + chr2_1:65648438-65648457 Msa0218470:CDS 60.0%
CCAATGTGCAGCTACGCCGA+TGG - chr2_1:65648532-65648551 None:intergenic 60.0%
CCATCGGCGTAGCTGCACAT+TGG + chr2_1:65648529-65648548 Msa0218470:exon 60.0%
GGAAAGTCCCGAGGCAGCAG+AGG + chr2_1:65645247-65645266 Msa0218470:CDS 65.0%
AAGTCCCGAGGCAGCAGAGG+AGG + chr2_1:65645250-65645269 Msa0218470:CDS 65.0%
TCTCGGGGTGATGCCTCGCA+AGG + chr2_1:65647838-65647857 Msa0218470:CDS 65.0%
GGGGTGATGCCTCGCAAGGT+AGG + chr2_1:65647842-65647861 Msa0218470:intron 65.0%
CTCTTGGCGGCCGCTATTCC+CGG + chr2_1:65648134-65648153 Msa0218470:CDS 65.0%
TCTTGGCGGCCGCTATTCCC+GGG + chr2_1:65648135-65648154 Msa0218470:CDS 65.0%
ACCGAGGGCTCAAGAGTCCG+AGG - chr2_1:65648364-65648383 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 65643496 65648991 65643496 ID=Msa0218470;Name=Msa0218470
chr2_1 mRNA 65643496 65648991 65643496 ID=Msa0218470-mRNA-1;Parent=Msa0218470;Name=Msa0218470-mRNA-1;_AED=0.03;_eAED=0.03;_QI=217|1|1|1|1|1|4|451|539
chr2_1 exon 65643496 65643901 65643496 ID=Msa0218470-mRNA-1:exon:18305;Parent=Msa0218470-mRNA-1
chr2_1 exon 65644717 65645688 65644717 ID=Msa0218470-mRNA-1:exon:18306;Parent=Msa0218470-mRNA-1
chr2_1 exon 65647812 65647859 65647812 ID=Msa0218470-mRNA-1:exon:18307;Parent=Msa0218470-mRNA-1
chr2_1 exon 65648130 65648991 65648130 ID=Msa0218470-mRNA-1:exon:18308;Parent=Msa0218470-mRNA-1
chr2_1 five_prime_UTR 65643496 65643712 65643496 ID=Msa0218470-mRNA-1:five_prime_utr;Parent=Msa0218470-mRNA-1
chr2_1 CDS 65643713 65643901 65643713 ID=Msa0218470-mRNA-1:cds;Parent=Msa0218470-mRNA-1
chr2_1 CDS 65644717 65645688 65644717 ID=Msa0218470-mRNA-1:cds;Parent=Msa0218470-mRNA-1
chr2_1 CDS 65647812 65647859 65647812 ID=Msa0218470-mRNA-1:cds;Parent=Msa0218470-mRNA-1
chr2_1 CDS 65648130 65648540 65648130 ID=Msa0218470-mRNA-1:cds;Parent=Msa0218470-mRNA-1
chr2_1 three_prime_UTR 65648541 65648991 65648541 ID=Msa0218470-mRNA-1:three_prime_utr;Parent=Msa0218470-mRNA-1
Gene Sequence

>Msa0218470

ATGGCGGAGGATCGCAAAGATGCGAGTGATTACAGTTCGGAAGATGAAGGAACTGAGGATTACAAACGAGGTGGTTATCATGCGGTTCAGATTGGTGACACTTTCAAAAATGGGTGCTATGTTGTTCAGAGTAAGCTTGGCTGGGGTCATTTTTCAACTGTTTGGCTCGCTTGGGATACTCAGAAATTGCGATATGTTGCCTTAAAAATTCAGAAGAGTGCTCAGCACTACACGGAAGCGGCAATGGATGAAATAAAGATTCTCAAACAAATTGCTGAAGGGGATCTAGAGGATAAGAAATGTGTTGTGAAGCTTTTGGACCACTTTAAGCATTCAGGGCCTAATGGTCAGCATGTTTGTATGGTTTTTGAATTCCTTGGGGACAATCTTCTTACACTTATCAAGTATAGTGATTATCGTGGTATTCCCCTTCCCATGGTCAAAGAAATTTGCTACCATGTTTTGGTGGGTTTGGATTATTTGCATCGTGAGCTTTCTATAATACACACTGATTTGAAGCCAGAAAATGTTTTGCTTGTCTCTCCAATAGATCCATCTAAAGATCCTAGAAAATCAGGAGTCCCACTTATACTTCCAACCACTAAAGTCAAGACTGTATCCAAGAACGGGACCACAAAACATGATAAAAGTTCGAATGGAGATTTAACCAAGAACCAGAAAAAGAAGATGCGGAAAAAGGCTAAAAAAGCAGCTCAGAAGGAAAGTCCCGAGGCAGCAGAGGAGGATTCTGAAGCACCTGAACAAGATGATTCTAGTAATGATGTGAAACCAATTGTAGAAAATGGTGAAGGTAAACCTAATAGTCCCACAAGTAAAGATGAATCAGCAATGACTTCTGAAACTAAGGATGTTCCACAAGGAAGTCAGGTTTCTAGGAGAGGTAGTTGCTCTACGAGAAAGAAGTTGCTCGCAGCTGCTGATCTTAAGTGCAAGCTTGTGGATTTTGGAAATGCTTGTTGGACGTATAAACAATTTACAAATGATATCCAGACTAGGCAGTATAGATGTCCTGAGGTTCTTCTAGGTTCTAAATACTCGACTCCGGCAGATATGTGGTCCTTTGCTTGCATATGCTTTGAGCTTGCCACTGGCGATGTTCTTTTTGATCCTCACAGTGGTGAAAACTATGACAGGGATGAGGATCATCTGGCATTGATGATGGAGCTTCTCGGGGTGATGCCTCGCAAGATTGCTCTTGGCGGCCGCTATTCCCGGGACTTTTTCAATAGATCTGGTGATTTGAGACACATTCGCCGGTTGCGGTTCTGGCCTATTACTAAGGTTTTGACGGAGAAGTATGATTTCAGTGCGCAAGATGCAAGTGACATGTCTGACTTCCTTGTTCCGTTACTTGACTTTGTTCCTGAAAAGAGACCAACGGCCGCTCAGTGTCTTACTCATCCATGGATGAGTGCAGGTCCTCGGACTCTTGAGCCCTCGGTGAATAGCATCCATGCTGATGCTATTAACGGAGAAAAGCCTGGAAAGTTAAGGGAAAAGGACGAGCAGGAGGCTGTGGAAGTTAGTATGGGGAATATGACCATTGATGGAACTCCAAAGACACTCAAAGATTTCCAATCTACAAAACCATCGGCGTAG
Protein sequence

>Msa0218470

MAEDRKDASDYSSEDEGTEDYKRGGYHAVQIGDTFKNGCYVVQSKLGWGHFSTVWLAWDTQKLRYVALKIQKSAQHYTEAAMDEIKILKQIAEGDLEDKKCVVKLLDHFKHSGPNGQHVCMVFEFLGDNLLTLIKYSDYRGIPLPMVKEICYHVLVGLDYLHRELSIIHTDLKPENVLLVSPIDPSKDPRKSGVPLILPTTKVKTVSKNGTTKHDKSSNGDLTKNQKKKMRKKAKKAAQKESPEAAEEDSEAPEQDDSSNDVKPIVENGEGKPNSPTSKDESAMTSETKDVPQGSQVSRRGSCSTRKKLLAAADLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADMWSFACICFELATGDVLFDPHSGENYDRDEDHLALMMELLGVMPRKIALGGRYSRDFFNRSGDLRHIRRLRFWPITKVLTEKYDFSAQDASDMSDFLVPLLDFVPEKRPTAAQCLTHPWMSAGPRTLEPSVNSIHADAINGEKPGKLREKDEQEAVEVSMGNMTIDGTPKTLKDFQSTKPSA*