Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1433250 | XP_013457933.1 | 97.840 | 324 | 7 | 0 | 1 | 324 | 1 | 324 | 0.0 | 631 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1433250 | A0A072UQ71 | 97.840 | 324 | 7 | 0 | 1 | 324 | 1 | 324 | 0.0 | 631 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1433250 | Msa1446110 | 0.807895 | 4.041399e-50 | -8.615850e-47 |
| Msa1037550 | Msa1433250 | 0.810786 | 9.692931e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1433250 | MtrunA17_Chr4g0061091 | 97.840 | 324 | 7 | 0 | 1 | 324 | 1 | 324 | 0.0 | 631 |
| Msa1433250 | MtrunA17_Chr3g0091531 | 69.394 | 330 | 89 | 3 | 1 | 324 | 1 | 324 | 1.07e-153 | 433 |
| Msa1433250 | MtrunA17_Chr4g0042771 | 25.685 | 292 | 190 | 10 | 6 | 294 | 49 | 316 | 1.99e-19 | 87.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1433250 | AT5G61340.1 | 46.687 | 332 | 157 | 8 | 1 | 323 | 5 | 325 | 6.48e-81 | 249 |
| Msa1433250 | AT5G61340.2 | 46.687 | 332 | 157 | 8 | 1 | 323 | 38 | 358 | 2.16e-80 | 249 |
| Msa1433250 | AT1G69430.1 | 29.667 | 300 | 183 | 10 | 6 | 294 | 45 | 327 | 2.77e-24 | 101 |
| Msa1433250 | AT1G26650.1 | 27.526 | 287 | 196 | 8 | 6 | 289 | 29 | 306 | 8.17e-24 | 100 |
Find 55 sgRNAs with CRISPR-Local
Find 130 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCAAATTTATAACCGTTTA+AGG | 0.015328 | tig0027251:+15698 | Msa1433250:CDS |
| TTTCAAGAAGTGGACAATTA+TGG | 0.284116 | tig0027251:+16459 | Msa1433250:CDS |
| GAGTTTAAGTGCTTGAATTA+TGG | 0.313893 | tig0027251:-15857 | None:intergenic |
| TAAAGCTTGTATCTTGATAA+GGG | 0.315641 | tig0027251:+16185 | Msa1433250:CDS |
| TTAAAGCTTGTATCTTGATA+AGG | 0.341052 | tig0027251:+16184 | Msa1433250:CDS |
| AAGTGAAATAATGATAGTTT+TGG | 0.354262 | tig0027251:-15591 | None:intergenic |
| CAAGAAACAGTTGCAGATAT+AGG | 0.364089 | tig0027251:-15950 | None:intergenic |
| CTCCTCTTCATGTCAGCGAC+CGG | 0.364905 | tig0027251:+16060 | Msa1433250:CDS |
| AATATGTCACTTGTTCTATC+TGG | 0.371364 | tig0027251:+16129 | Msa1433250:CDS |
| GCAGCCAAGGCAATATTAAC+AGG | 0.394585 | tig0027251:-16240 | None:intergenic |
| GGTTATAAATTTGAGGCAAA+AGG | 0.402196 | tig0027251:-15690 | None:intergenic |
| TCCTCTTCATGTCAGCGACC+GGG | 0.410312 | tig0027251:+16061 | Msa1433250:CDS |
| TGTTTCACTTCAGAATTGTA+AGG | 0.417611 | tig0027251:+16274 | Msa1433250:CDS |
| GTAAGGGAATATCACATTGT+TGG | 0.423368 | tig0027251:+16291 | Msa1433250:CDS |
| AATGTTGAACAATAGAGAAT+AGG | 0.432290 | tig0027251:-15749 | None:intergenic |
| CTTAAACGGTTATAAATTTG+AGG | 0.435128 | tig0027251:-15697 | None:intergenic |
| ATCCCCTCTAAAAGCACAAA+AGG | 0.440963 | tig0027251:-16324 | None:intergenic |
| ACTTCCTGTTAATATTGCCT+TGG | 0.454147 | tig0027251:+16236 | Msa1433250:CDS |
| AGAAGGACAGTTAGTGTGAA+AGG | 0.454408 | tig0027251:-15820 | None:intergenic |
| GAGAATGAAGGTGGCAAAGA+TGG | 0.476193 | tig0027251:-15892 | None:intergenic |
| TTCAGCTTTGTTGAAACACT+TGG | 0.481261 | tig0027251:+16018 | Msa1433250:CDS |
| GACATGAAGAGGAGGAAACT+AGG | 0.482045 | tig0027251:-16051 | None:intergenic |
| GTCACTTGTTCTATCTGGTA+TGG | 0.482263 | tig0027251:+16134 | Msa1433250:CDS |
| GTTATAAATTTGAGGCAAAA+GGG | 0.486260 | tig0027251:-15689 | None:intergenic |
| AGGAGAATCATGCATTGGTC+AGG | 0.492954 | tig0027251:+16425 | Msa1433250:CDS |
| ATGAGTATCGAAGCAGAGAA+AGG | 0.504345 | tig0027251:-15637 | None:intergenic |
| ATTTGAGGCAAAAGGGATGA+AGG | 0.511390 | tig0027251:-15682 | None:intergenic |
| CCTCTTCATGTCAGCGACCG+GGG | 0.524558 | tig0027251:+16062 | Msa1433250:CDS |
| GGAATATCACATTGTTGGAA+AGG | 0.524960 | tig0027251:+16296 | Msa1433250:CDS |
| GTGGACAATTATGGTTACAT+TGG | 0.525805 | tig0027251:+16468 | Msa1433250:CDS |
| CAGATATAGGTGTGGAAGAG+TGG | 0.530195 | tig0027251:-15937 | None:intergenic |
| CAAGGCTTCAATAGCAGCCA+AGG | 0.531315 | tig0027251:-16253 | None:intergenic |
| GAAGGACAGTTAGTGTGAAA+GGG | 0.531755 | tig0027251:-15819 | None:intergenic |
| GGAAGGACATGGTGGATACT+CGG | 0.533045 | tig0027251:+16155 | Msa1433250:CDS |
| GTTCAACATTCTTAACCTCA+AGG | 0.536846 | tig0027251:+15762 | Msa1433250:CDS |
| CCCCGGTCGCTGACATGAAG+AGG | 0.552022 | tig0027251:-16062 | None:intergenic |
| GTTTCACTTCAGAATTGTAA+GGG | 0.558550 | tig0027251:+16275 | Msa1433250:CDS |
| GCTATTATCGAAGAGAATGA+AGG | 0.569442 | tig0027251:-15904 | None:intergenic |
| ATTGCATATCACAAGTGCAT+TGG | 0.569840 | tig0027251:-16109 | None:intergenic |
| CTTGTTCTATCTGGTATGGA+AGG | 0.576428 | tig0027251:+16138 | Msa1433250:CDS |
| AGAATCATGCATTGGTCAGG+AGG | 0.582085 | tig0027251:+16428 | Msa1433250:CDS |
| GATAAGGGGAAAGACATCAA+TGG | 0.595318 | tig0027251:+16200 | Msa1433250:CDS |
| TTGAACAATAGAGAATAGGA+AGG | 0.596055 | tig0027251:-15745 | None:intergenic |
| AAGACAGGAGAATCATGCAT+TGG | 0.601882 | tig0027251:+16420 | Msa1433250:CDS |
| AAAGCTTGTATCTTGATAAG+GGG | 0.603714 | tig0027251:+16186 | Msa1433250:CDS |
| TACAATTCTGAAGTGAAACA+AGG | 0.613545 | tig0027251:-16271 | None:intergenic |
| ATCACATTGTTGGAAAGGCA+AGG | 0.615036 | tig0027251:+16301 | Msa1433250:CDS |
| GGCAAAAGGGATGAAGGAGA+AGG | 0.617930 | tig0027251:-15676 | None:intergenic |
| AACAGTTGCAGATATAGGTG+TGG | 0.621021 | tig0027251:-15945 | None:intergenic |
| AGCAACTCACAATTGTGTCA+AGG | 0.625192 | tig0027251:-16380 | None:intergenic |
| TGATTGTTTGAGAAACCTTG+AGG | 0.628286 | tig0027251:-15777 | None:intergenic |
| CGGTCGCTGACATGAAGAGG+AGG | 0.647162 | tig0027251:-16059 | None:intergenic |
| CTATCTGGTATGGAAGGACA+TGG | 0.647711 | tig0027251:+16144 | Msa1433250:CDS |
| ATTATCGAAGAGAATGAAGG+TGG | 0.661031 | tig0027251:-15901 | None:intergenic |
| TCTGGTATGGAAGGACATGG+TGG | 0.680756 | tig0027251:+16147 | Msa1433250:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTCTTTTTGTATTATGTTTT+TGG | + | tig0027251:15993-16012 | Msa1433250:CDS | 15.0% |
| !!! | TTCTTTTTGTATTATGTTTT+TGG | + | tig0027251:15993-16012 | Msa1433250:CDS | 15.0% |
| !!! | AAGTGAAATAATGATAGTTT+TGG | - | tig0027251:15594-15613 | None:intergenic | 20.0% |
| !!! | AAGTGAAATAATGATAGTTT+TGG | - | tig0027251:15594-15613 | None:intergenic | 20.0% |
| !! | GTTATAAATTTGAGGCAAAA+GGG | - | tig0027251:15692-15711 | None:intergenic | 25.0% |
| ! | CTTAAACGGTTATAAATTTG+AGG | - | tig0027251:15700-15719 | None:intergenic | 25.0% |
| ! | CTCAAATTTATAACCGTTTA+AGG | + | tig0027251:15698-15717 | Msa1433250:CDS | 25.0% |
| ! | AATGTTGAACAATAGAGAAT+AGG | - | tig0027251:15752-15771 | None:intergenic | 25.0% |
| ! | TTAAAGCTTGTATCTTGATA+AGG | + | tig0027251:16184-16203 | Msa1433250:CDS | 25.0% |
| ! | TAAAGCTTGTATCTTGATAA+GGG | + | tig0027251:16185-16204 | Msa1433250:CDS | 25.0% |
| !! | GTTATAAATTTGAGGCAAAA+GGG | - | tig0027251:15692-15711 | None:intergenic | 25.0% |
| ! | CTTAAACGGTTATAAATTTG+AGG | - | tig0027251:15700-15719 | None:intergenic | 25.0% |
| ! | CTCAAATTTATAACCGTTTA+AGG | + | tig0027251:15698-15717 | Msa1433250:CDS | 25.0% |
| ! | AATGTTGAACAATAGAGAAT+AGG | - | tig0027251:15752-15771 | None:intergenic | 25.0% |
| ! | TTAAAGCTTGTATCTTGATA+AGG | + | tig0027251:16184-16203 | Msa1433250:CDS | 25.0% |
| ! | TAAAGCTTGTATCTTGATAA+GGG | + | tig0027251:16185-16204 | Msa1433250:CDS | 25.0% |
| ! | GGTTATAAATTTGAGGCAAA+AGG | - | tig0027251:15693-15712 | None:intergenic | 30.0% |
| CATCAAAAAGAGTCCTTAAA+CGG | - | tig0027251:15714-15733 | None:intergenic | 30.0% | |
| TTGAACAATAGAGAATAGGA+AGG | - | tig0027251:15748-15767 | None:intergenic | 30.0% | |
| GAGTTTAAGTGCTTGAATTA+TGG | - | tig0027251:15860-15879 | None:intergenic | 30.0% | |
| ! | AATATGTCACTTGTTCTATC+TGG | + | tig0027251:16129-16148 | Msa1433250:CDS | 30.0% |
| AAAGCTTGTATCTTGATAAG+GGG | + | tig0027251:16186-16205 | Msa1433250:CDS | 30.0% | |
| !! | TACAATTCTGAAGTGAAACA+AGG | - | tig0027251:16274-16293 | None:intergenic | 30.0% |
| TGTTTCACTTCAGAATTGTA+AGG | + | tig0027251:16274-16293 | Msa1433250:CDS | 30.0% | |
| GTTTCACTTCAGAATTGTAA+GGG | + | tig0027251:16275-16294 | Msa1433250:CDS | 30.0% | |
| ! | TTTTACAAAAGCTTCAAGAC+AGG | + | tig0027251:16405-16424 | Msa1433250:CDS | 30.0% |
| TTTCAAGAAGTGGACAATTA+TGG | + | tig0027251:16459-16478 | Msa1433250:CDS | 30.0% | |
| ! | GGTTATAAATTTGAGGCAAA+AGG | - | tig0027251:15693-15712 | None:intergenic | 30.0% |
| CATCAAAAAGAGTCCTTAAA+CGG | - | tig0027251:15714-15733 | None:intergenic | 30.0% | |
| TTGAACAATAGAGAATAGGA+AGG | - | tig0027251:15748-15767 | None:intergenic | 30.0% | |
| GAGTTTAAGTGCTTGAATTA+TGG | - | tig0027251:15860-15879 | None:intergenic | 30.0% | |
| ! | AATATGTCACTTGTTCTATC+TGG | + | tig0027251:16129-16148 | Msa1433250:CDS | 30.0% |
| AAAGCTTGTATCTTGATAAG+GGG | + | tig0027251:16186-16205 | Msa1433250:CDS | 30.0% | |
| !! | TACAATTCTGAAGTGAAACA+AGG | - | tig0027251:16274-16293 | None:intergenic | 30.0% |
| TGTTTCACTTCAGAATTGTA+AGG | + | tig0027251:16274-16293 | Msa1433250:CDS | 30.0% | |
| GTTTCACTTCAGAATTGTAA+GGG | + | tig0027251:16275-16294 | Msa1433250:CDS | 30.0% | |
| ! | TTTTACAAAAGCTTCAAGAC+AGG | + | tig0027251:16405-16424 | Msa1433250:CDS | 30.0% |
| TTTCAAGAAGTGGACAATTA+TGG | + | tig0027251:16459-16478 | Msa1433250:CDS | 30.0% | |
| GTTCAACATTCTTAACCTCA+AGG | + | tig0027251:15762-15781 | Msa1433250:CDS | 35.0% | |
| TGATTGTTTGAGAAACCTTG+AGG | - | tig0027251:15780-15799 | None:intergenic | 35.0% | |
| ATTATCGAAGAGAATGAAGG+TGG | - | tig0027251:15904-15923 | None:intergenic | 35.0% | |
| GCTATTATCGAAGAGAATGA+AGG | - | tig0027251:15907-15926 | None:intergenic | 35.0% | |
| CAAGAAACAGTTGCAGATAT+AGG | - | tig0027251:15953-15972 | None:intergenic | 35.0% | |
| !! | TTCAGCTTTGTTGAAACACT+TGG | + | tig0027251:16018-16037 | Msa1433250:CDS | 35.0% |
| ATTGCATATCACAAGTGCAT+TGG | - | tig0027251:16112-16131 | None:intergenic | 35.0% | |
| ACTTCCTGTTAATATTGCCT+TGG | + | tig0027251:16236-16255 | Msa1433250:CDS | 35.0% | |
| GTAAGGGAATATCACATTGT+TGG | + | tig0027251:16291-16310 | Msa1433250:CDS | 35.0% | |
| GGAATATCACATTGTTGGAA+AGG | + | tig0027251:16296-16315 | Msa1433250:CDS | 35.0% | |
| !! | GGACAAACATTTTCAAGAAG+TGG | + | tig0027251:16449-16468 | Msa1433250:CDS | 35.0% |
| GTGGACAATTATGGTTACAT+TGG | + | tig0027251:16468-16487 | Msa1433250:CDS | 35.0% | |
| GTTCAACATTCTTAACCTCA+AGG | + | tig0027251:15762-15781 | Msa1433250:CDS | 35.0% | |
| TGATTGTTTGAGAAACCTTG+AGG | - | tig0027251:15780-15799 | None:intergenic | 35.0% | |
| ATTATCGAAGAGAATGAAGG+TGG | - | tig0027251:15904-15923 | None:intergenic | 35.0% | |
| GCTATTATCGAAGAGAATGA+AGG | - | tig0027251:15907-15926 | None:intergenic | 35.0% | |
| CAAGAAACAGTTGCAGATAT+AGG | - | tig0027251:15953-15972 | None:intergenic | 35.0% | |
| !! | TTCAGCTTTGTTGAAACACT+TGG | + | tig0027251:16018-16037 | Msa1433250:CDS | 35.0% |
| ATTGCATATCACAAGTGCAT+TGG | - | tig0027251:16112-16131 | None:intergenic | 35.0% | |
| ACTTCCTGTTAATATTGCCT+TGG | + | tig0027251:16236-16255 | Msa1433250:CDS | 35.0% | |
| GTAAGGGAATATCACATTGT+TGG | + | tig0027251:16291-16310 | Msa1433250:CDS | 35.0% | |
| GGAATATCACATTGTTGGAA+AGG | + | tig0027251:16296-16315 | Msa1433250:CDS | 35.0% | |
| !! | GGACAAACATTTTCAAGAAG+TGG | + | tig0027251:16449-16468 | Msa1433250:CDS | 35.0% |
| GTGGACAATTATGGTTACAT+TGG | + | tig0027251:16468-16487 | Msa1433250:CDS | 35.0% | |
| !! | ATGAGTATCGAAGCAGAGAA+AGG | - | tig0027251:15640-15659 | None:intergenic | 40.0% |
| ! | ATTTGAGGCAAAAGGGATGA+AGG | - | tig0027251:15685-15704 | None:intergenic | 40.0% |
| GAAGGACAGTTAGTGTGAAA+GGG | - | tig0027251:15822-15841 | None:intergenic | 40.0% | |
| AGAAGGACAGTTAGTGTGAA+AGG | - | tig0027251:15823-15842 | None:intergenic | 40.0% | |
| ! | TGGATGCTTTTGCAATCAGA+AGG | - | tig0027251:15840-15859 | None:intergenic | 40.0% |
| AACAGTTGCAGATATAGGTG+TGG | - | tig0027251:15948-15967 | None:intergenic | 40.0% | |
| GTCACTTGTTCTATCTGGTA+TGG | + | tig0027251:16134-16153 | Msa1433250:CDS | 40.0% | |
| CTTGTTCTATCTGGTATGGA+AGG | + | tig0027251:16138-16157 | Msa1433250:CDS | 40.0% | |
| GATAAGGGGAAAGACATCAA+TGG | + | tig0027251:16200-16219 | Msa1433250:CDS | 40.0% | |
| ATCACATTGTTGGAAAGGCA+AGG | + | tig0027251:16301-16320 | Msa1433250:CDS | 40.0% | |
| ! | AAGGCCTTTTGTGCTTTTAG+AGG | + | tig0027251:16320-16339 | Msa1433250:CDS | 40.0% |
| ! | AGGCCTTTTGTGCTTTTAGA+GGG | + | tig0027251:16321-16340 | Msa1433250:CDS | 40.0% |
| ! | ATCCCCTCTAAAAGCACAAA+AGG | - | tig0027251:16327-16346 | None:intergenic | 40.0% |
| AGCAACTCACAATTGTGTCA+AGG | - | tig0027251:16383-16402 | None:intergenic | 40.0% | |
| AAGACAGGAGAATCATGCAT+TGG | + | tig0027251:16420-16439 | Msa1433250:CDS | 40.0% | |
| !! | ATGAGTATCGAAGCAGAGAA+AGG | - | tig0027251:15640-15659 | None:intergenic | 40.0% |
| ! | ATTTGAGGCAAAAGGGATGA+AGG | - | tig0027251:15685-15704 | None:intergenic | 40.0% |
| GAAGGACAGTTAGTGTGAAA+GGG | - | tig0027251:15822-15841 | None:intergenic | 40.0% | |
| AGAAGGACAGTTAGTGTGAA+AGG | - | tig0027251:15823-15842 | None:intergenic | 40.0% | |
| ! | TGGATGCTTTTGCAATCAGA+AGG | - | tig0027251:15840-15859 | None:intergenic | 40.0% |
| AACAGTTGCAGATATAGGTG+TGG | - | tig0027251:15948-15967 | None:intergenic | 40.0% | |
| GTCACTTGTTCTATCTGGTA+TGG | + | tig0027251:16134-16153 | Msa1433250:CDS | 40.0% | |
| CTTGTTCTATCTGGTATGGA+AGG | + | tig0027251:16138-16157 | Msa1433250:CDS | 40.0% | |
| GATAAGGGGAAAGACATCAA+TGG | + | tig0027251:16200-16219 | Msa1433250:CDS | 40.0% | |
| ATCACATTGTTGGAAAGGCA+AGG | + | tig0027251:16301-16320 | Msa1433250:CDS | 40.0% | |
| ! | AAGGCCTTTTGTGCTTTTAG+AGG | + | tig0027251:16320-16339 | Msa1433250:CDS | 40.0% |
| ! | AGGCCTTTTGTGCTTTTAGA+GGG | + | tig0027251:16321-16340 | Msa1433250:CDS | 40.0% |
| ! | ATCCCCTCTAAAAGCACAAA+AGG | - | tig0027251:16327-16346 | None:intergenic | 40.0% |
| AGCAACTCACAATTGTGTCA+AGG | - | tig0027251:16383-16402 | None:intergenic | 40.0% | |
| AAGACAGGAGAATCATGCAT+TGG | + | tig0027251:16420-16439 | Msa1433250:CDS | 40.0% | |
| ! | AGGACTCTTTTTGATGCTGC+AGG | + | tig0027251:15718-15737 | Msa1433250:CDS | 45.0% |
| GAGAATGAAGGTGGCAAAGA+TGG | - | tig0027251:15895-15914 | None:intergenic | 45.0% | |
| CAGATATAGGTGTGGAAGAG+TGG | - | tig0027251:15940-15959 | None:intergenic | 45.0% | |
| GACATGAAGAGGAGGAAACT+AGG | - | tig0027251:16054-16073 | None:intergenic | 45.0% | |
| CACAGAAAAAAGAACTGCCC+CGG | - | tig0027251:16082-16101 | None:intergenic | 45.0% | |
| CTATCTGGTATGGAAGGACA+TGG | + | tig0027251:16144-16163 | Msa1433250:CDS | 45.0% | |
| GCAGCCAAGGCAATATTAAC+AGG | - | tig0027251:16243-16262 | None:intergenic | 45.0% | |
| !! | GGCCTTTTGTGCTTTTAGAG+GGG | + | tig0027251:16322-16341 | Msa1433250:CDS | 45.0% |
| ! | AGGAGAATCATGCATTGGTC+AGG | + | tig0027251:16425-16444 | Msa1433250:CDS | 45.0% |
| ! | AGAATCATGCATTGGTCAGG+AGG | + | tig0027251:16428-16447 | Msa1433250:CDS | 45.0% |
| ! | AGGACTCTTTTTGATGCTGC+AGG | + | tig0027251:15718-15737 | Msa1433250:CDS | 45.0% |
| GAGAATGAAGGTGGCAAAGA+TGG | - | tig0027251:15895-15914 | None:intergenic | 45.0% | |
| CAGATATAGGTGTGGAAGAG+TGG | - | tig0027251:15940-15959 | None:intergenic | 45.0% | |
| GACATGAAGAGGAGGAAACT+AGG | - | tig0027251:16054-16073 | None:intergenic | 45.0% | |
| CACAGAAAAAAGAACTGCCC+CGG | - | tig0027251:16082-16101 | None:intergenic | 45.0% | |
| CTATCTGGTATGGAAGGACA+TGG | + | tig0027251:16144-16163 | Msa1433250:CDS | 45.0% | |
| GCAGCCAAGGCAATATTAAC+AGG | - | tig0027251:16243-16262 | None:intergenic | 45.0% | |
| !! | GGCCTTTTGTGCTTTTAGAG+GGG | + | tig0027251:16322-16341 | Msa1433250:CDS | 45.0% |
| ! | AGGAGAATCATGCATTGGTC+AGG | + | tig0027251:16425-16444 | Msa1433250:CDS | 45.0% |
| ! | AGAATCATGCATTGGTCAGG+AGG | + | tig0027251:16428-16447 | Msa1433250:CDS | 45.0% |
| GGCAAAAGGGATGAAGGAGA+AGG | - | tig0027251:15679-15698 | None:intergenic | 50.0% | |
| TCTGGTATGGAAGGACATGG+TGG | + | tig0027251:16147-16166 | Msa1433250:CDS | 50.0% | |
| !! | GGAAGGACATGGTGGATACT+CGG | + | tig0027251:16155-16174 | Msa1433250:CDS | 50.0% |
| CAAGGCTTCAATAGCAGCCA+AGG | - | tig0027251:16256-16275 | None:intergenic | 50.0% | |
| GGCAAAAGGGATGAAGGAGA+AGG | - | tig0027251:15679-15698 | None:intergenic | 50.0% | |
| TCTGGTATGGAAGGACATGG+TGG | + | tig0027251:16147-16166 | Msa1433250:CDS | 50.0% | |
| !! | GGAAGGACATGGTGGATACT+CGG | + | tig0027251:16155-16174 | Msa1433250:CDS | 50.0% |
| CAAGGCTTCAATAGCAGCCA+AGG | - | tig0027251:16256-16275 | None:intergenic | 50.0% | |
| CTCCTCTTCATGTCAGCGAC+CGG | + | tig0027251:16060-16079 | Msa1433250:CDS | 55.0% | |
| TCCTCTTCATGTCAGCGACC+GGG | + | tig0027251:16061-16080 | Msa1433250:CDS | 55.0% | |
| CTCCTCTTCATGTCAGCGAC+CGG | + | tig0027251:16060-16079 | Msa1433250:CDS | 55.0% | |
| TCCTCTTCATGTCAGCGACC+GGG | + | tig0027251:16061-16080 | Msa1433250:CDS | 55.0% | |
| CGGTCGCTGACATGAAGAGG+AGG | - | tig0027251:16062-16081 | None:intergenic | 60.0% | |
| CCTCTTCATGTCAGCGACCG+GGG | + | tig0027251:16062-16081 | Msa1433250:CDS | 60.0% | |
| CGGTCGCTGACATGAAGAGG+AGG | - | tig0027251:16062-16081 | None:intergenic | 60.0% | |
| CCTCTTCATGTCAGCGACCG+GGG | + | tig0027251:16062-16081 | Msa1433250:CDS | 60.0% | |
| CCCCGGTCGCTGACATGAAG+AGG | - | tig0027251:16065-16084 | None:intergenic | 65.0% | |
| CCCCGGTCGCTGACATGAAG+AGG | - | tig0027251:16065-16084 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0027251 | gene | 15544 | 16518 | 15544 | ID=Msa1433250;Name=Msa1433250 |
| tig0027251 | mRNA | 15544 | 16518 | 15544 | ID=Msa1433250-mRNA-1;Parent=Msa1433250;Name=Msa1433250-mRNA-1;_AED=0.00;_eAED=0.02;_QI=0|-1|0|1|-1|1|1|0|324 |
| tig0027251 | exon | 15544 | 16518 | 15544 | ID=Msa1433250-mRNA-1:exon:8537;Parent=Msa1433250-mRNA-1 |
| tig0027251 | CDS | 15544 | 16518 | 15544 | ID=Msa1433250-mRNA-1:cds;Parent=Msa1433250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
