Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1440300 | sp|Q84J88|HIP36_ARATH | 50.495 | 101 | 45 | 2 | 9 | 105 | 21 | 120 | 2.21e-21 | 97.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1440300 | G7I8P5 | 83.463 | 387 | 36 | 8 | 1 | 371 | 1 | 375 | 5.38e-178 | 509 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0747240 | Msa1440300 | 0.807316 | 5.363691e-50 | -8.615850e-47 |
| Msa0172760 | Msa1440300 | 0.900084 | 1.043674e-77 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1440300 | MtrunA17_Chr1g0192131 | 83.463 | 387 | 36 | 8 | 1 | 371 | 1 | 375 | 0.0 | 509 |
| Msa1440300 | MtrunA17_Chr7g0272571 | 34.758 | 351 | 155 | 15 | 18 | 353 | 33 | 324 | 2.80e-28 | 113 |
| Msa1440300 | MtrunA17_Chr7g0269081 | 43.284 | 134 | 64 | 3 | 1 | 130 | 1 | 126 | 1.86e-19 | 87.8 |
| Msa1440300 | MtrunA17_Chr1g0208301 | 52.000 | 75 | 35 | 1 | 9 | 83 | 4 | 77 | 1.39e-17 | 83.2 |
| Msa1440300 | MtrunA17_Chr2g0287751 | 56.944 | 72 | 30 | 1 | 15 | 86 | 7 | 77 | 1.46e-17 | 84.0 |
| Msa1440300 | MtrunA17_Chr4g0065651 | 54.054 | 74 | 33 | 1 | 13 | 86 | 5 | 77 | 6.01e-17 | 82.0 |
| Msa1440300 | MtrunA17_Chr0c22g0493881 | 54.054 | 74 | 33 | 1 | 13 | 86 | 5 | 77 | 9.87e-17 | 80.9 |
| Msa1440300 | MtrunA17_Chr4g0065621 | 54.054 | 74 | 33 | 1 | 13 | 86 | 5 | 77 | 6.26e-16 | 78.6 |
| Msa1440300 | MtrunA17_Chr2g0287741 | 59.155 | 71 | 28 | 1 | 18 | 88 | 15 | 84 | 7.64e-16 | 79.0 |
| Msa1440300 | MtrunA17_Chr7g0218981 | 39.535 | 86 | 47 | 2 | 15 | 96 | 1 | 85 | 1.36e-15 | 72.8 |
| Msa1440300 | MtrunA17_Chr1g0191671 | 49.275 | 69 | 34 | 1 | 15 | 83 | 7 | 74 | 3.80e-15 | 76.6 |
| Msa1440300 | MtrunA17_Chr2g0296001 | 48.235 | 85 | 43 | 1 | 1 | 85 | 56 | 139 | 9.41e-15 | 74.7 |
| Msa1440300 | MtrunA17_Chr4g0036931 | 41.176 | 68 | 40 | 0 | 17 | 84 | 27 | 94 | 1.11e-13 | 68.2 |
| Msa1440300 | MtrunA17_Chr1g0198341 | 41.250 | 80 | 46 | 1 | 15 | 94 | 1 | 79 | 3.12e-13 | 64.7 |
| Msa1440300 | MtrunA17_Chr3g0111541 | 51.471 | 68 | 32 | 1 | 15 | 82 | 9 | 75 | 3.59e-13 | 68.2 |
| Msa1440300 | MtrunA17_Chr8g0382721 | 48.485 | 66 | 33 | 1 | 19 | 84 | 30 | 94 | 1.33e-12 | 65.1 |
| Msa1440300 | MtrunA17_Chr3g0145621 | 36.486 | 74 | 47 | 0 | 11 | 84 | 19 | 92 | 2.74e-12 | 64.3 |
| Msa1440300 | MtrunA17_Chr3g0115421 | 46.032 | 63 | 33 | 1 | 22 | 84 | 30 | 91 | 9.68e-12 | 62.4 |
| Msa1440300 | MtrunA17_Chr2g0285561 | 39.423 | 104 | 58 | 4 | 19 | 119 | 9 | 110 | 1.24e-11 | 64.7 |
| Msa1440300 | MtrunA17_Chr3g0124411 | 44.776 | 67 | 36 | 1 | 18 | 84 | 30 | 95 | 3.78e-11 | 60.8 |
| Msa1440300 | MtrunA17_Chr1g0160201 | 37.500 | 72 | 44 | 1 | 13 | 84 | 20 | 90 | 6.52e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1440300 | AT5G27690.1 | 50.495 | 101 | 45 | 2 | 9 | 105 | 21 | 120 | 2.24e-22 | 97.4 |
| Msa1440300 | AT1G56210.1 | 52.222 | 90 | 34 | 2 | 17 | 106 | 39 | 119 | 1.32e-18 | 86.7 |
| Msa1440300 | AT3G06130.2 | 52.703 | 74 | 34 | 1 | 13 | 86 | 5 | 77 | 6.76e-17 | 81.3 |
| Msa1440300 | AT3G06130.1 | 52.703 | 74 | 34 | 1 | 13 | 86 | 5 | 77 | 1.06e-16 | 81.6 |
| Msa1440300 | AT5G19090.2 | 52.703 | 74 | 34 | 1 | 13 | 86 | 5 | 77 | 1.79e-16 | 80.9 |
| Msa1440300 | AT5G19090.3 | 52.703 | 74 | 34 | 1 | 13 | 86 | 5 | 77 | 1.79e-16 | 80.9 |
| Msa1440300 | AT5G19090.5 | 52.703 | 74 | 34 | 1 | 13 | 86 | 5 | 77 | 2.28e-16 | 80.9 |
| Msa1440300 | AT5G19090.4 | 52.703 | 74 | 34 | 1 | 13 | 86 | 5 | 77 | 2.28e-16 | 80.9 |
| Msa1440300 | AT5G19090.1 | 52.703 | 74 | 34 | 1 | 13 | 86 | 5 | 77 | 2.28e-16 | 80.9 |
| Msa1440300 | AT1G23000.1 | 48.750 | 80 | 39 | 2 | 15 | 93 | 10 | 88 | 2.85e-16 | 79.7 |
| Msa1440300 | AT1G23000.2 | 48.750 | 80 | 39 | 2 | 15 | 93 | 70 | 148 | 8.38e-16 | 78.6 |
| Msa1440300 | AT5G37860.1 | 54.545 | 66 | 29 | 1 | 18 | 83 | 10 | 74 | 4.45e-15 | 75.1 |
| Msa1440300 | AT3G56240.3 | 36.449 | 107 | 65 | 2 | 18 | 122 | 3 | 108 | 4.49e-14 | 68.6 |
| Msa1440300 | AT3G56240.1 | 36.449 | 107 | 65 | 2 | 18 | 122 | 3 | 108 | 4.49e-14 | 68.6 |
| Msa1440300 | AT3G05220.1 | 47.826 | 69 | 35 | 1 | 15 | 83 | 7 | 74 | 1.67e-13 | 72.4 |
| Msa1440300 | AT5G66110.3 | 32.941 | 85 | 56 | 1 | 1 | 84 | 1 | 85 | 3.04e-12 | 64.3 |
| Msa1440300 | AT5G66110.1 | 32.941 | 85 | 56 | 1 | 1 | 84 | 1 | 85 | 3.04e-12 | 64.3 |
| Msa1440300 | AT1G66240.1 | 40.541 | 74 | 43 | 1 | 18 | 91 | 33 | 105 | 3.31e-12 | 63.2 |
| Msa1440300 | AT3G56240.2 | 34.343 | 99 | 62 | 2 | 26 | 122 | 1 | 98 | 3.01e-11 | 60.5 |
| Msa1440300 | AT5G66110.2 | 38.983 | 59 | 36 | 0 | 26 | 84 | 1 | 59 | 3.57e-11 | 60.5 |
| Msa1440300 | AT4G38580.1 | 37.313 | 67 | 42 | 0 | 18 | 84 | 26 | 92 | 4.26e-11 | 61.2 |
| Msa1440300 | AT4G38580.2 | 37.313 | 67 | 42 | 0 | 18 | 84 | 26 | 92 | 4.26e-11 | 61.2 |
| Msa1440300 | AT4G35060.1 | 34.722 | 72 | 47 | 0 | 13 | 84 | 20 | 91 | 5.98e-11 | 60.8 |
Find 82 sgRNAs with CRISPR-Local
Find 222 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTTGTTCTTCTCTGGTTT+TGG | 0.218419 | tig0029054:-50895 | None:intergenic |
| GCCGTTAACTTGAACGTTCT+TGG | 0.324864 | tig0029054:-51019 | None:intergenic |
| TGTTTCTCTTTGTTCTTCTC+TGG | 0.327013 | tig0029054:-50901 | None:intergenic |
| AACATGCTTCCCTGTCTTGT+TGG | 0.331354 | tig0029054:-50830 | None:intergenic |
| CCCGGTTGTGGAACCTTCGT+TGG | 0.354242 | tig0029054:-51091 | None:intergenic |
| CTGTCTTGTTGGTCAGTTTG+TGG | 0.373603 | tig0029054:-50819 | None:intergenic |
| TTTCATGGGCAAGTACATTC+AGG | 0.376558 | tig0029054:+51428 | Msa1440300:CDS |
| GCACCGGGTACTGGTGGTTC+AGG | 0.381070 | tig0029054:+51365 | Msa1440300:CDS |
| AAAGCGTACTTTGAAATTGA+TGG | 0.384277 | tig0029054:-50230 | None:intergenic |
| CCCAACGAAGGTTCCACAAC+CGG | 0.387354 | tig0029054:+51071 | Msa1440300:CDS |
| ACTGTTTGCTTTCTCACCTC+TGG | 0.389171 | tig0029054:-51147 | None:intergenic |
| TCCAAGAACGTTCAAGTTAA+CGG | 0.392742 | tig0029054:+50999 | Msa1440300:CDS |
| GCTATCACCACCAGTGTTAC+CGG | 0.393369 | tig0029054:-51268 | None:intergenic |
| ACCAGTGTTACCGGTTGAAC+CGG | 0.408584 | tig0029054:-51259 | None:intergenic |
| TTCTCGGCTACCGGTTTGGC+TGG | 0.414295 | tig0029054:-51177 | None:intergenic |
| GGTTCCACAACCGGGAAAAC+CGG | 0.417195 | tig0029054:+51080 | Msa1440300:CDS |
| CTTCACTTCAAACTTTCAAA+TGG | 0.418439 | tig0029054:+50297 | Msa1440300:exon |
| CAGGGAAGCATGTTGAGCTT+TGG | 0.426685 | tig0029054:+50820 | Msa1440300:CDS |
| ATGACGTGGCGGTACTTCAT+TGG | 0.427491 | tig0029054:-51481 | None:intergenic |
| TTCCGTGATGCACCGGGTAC+TGG | 0.429866 | tig0029054:+51356 | Msa1440300:CDS |
| CTTGCAGCCTGCGCAGTGAA+TGG | 0.433758 | tig0029054:-50509 | None:intergenic |
| CACCCACCGCAGCAGTACTA+TGG | 0.435990 | tig0029054:+51503 | Msa1440300:CDS |
| GTGGCGGTACTTCATTGGTT+AGG | 0.440696 | tig0029054:-51476 | None:intergenic |
| AGTTTGAAGTGAAGGAGAAA+AGG | 0.440825 | tig0029054:-50288 | None:intergenic |
| TTTGAGAAAACCGGTTCAAC+CGG | 0.444090 | tig0029054:+51230 | Msa1440300:CDS |
| GTACTGGTGGTTCAGGTAAC+CGG | 0.450368 | tig0029054:+51372 | Msa1440300:CDS |
| GGTTCTTCATTATCATCGTT+AGG | 0.452727 | tig0029054:-51225 | None:intergenic |
| CGGTCAAATGGTCAATTTCA+AGG | 0.454759 | tig0029054:+51392 | Msa1440300:CDS |
| CCGGTTGTGGAACCTTCGTT+GGG | 0.457013 | tig0029054:-51090 | None:intergenic |
| GATGAATACGGGAAATGAAA+TGG | 0.459560 | tig0029054:+51655 | Msa1440300:CDS |
| TGATGGCTCACGGTAACAAC+CGG | 0.471619 | tig0029054:-51576 | None:intergenic |
| AACTTGAACGTTCTTGGATG+TGG | 0.475224 | tig0029054:-51013 | None:intergenic |
| ATCACATGCGCGTATTGATA+CGG | 0.476164 | tig0029054:-51654 | None:intergenic |
| GAAGAACCATTTGAGAAAAC+CGG | 0.477484 | tig0029054:+51221 | Msa1440300:CDS |
| CACAAACTGACCAACAAGAC+AGG | 0.483302 | tig0029054:+50801 | Msa1440300:CDS |
| GAAAACAACAACAACGGAAC+AGG | 0.484637 | tig0029054:+50957 | Msa1440300:CDS |
| TACGTGTACGGCCTTGGCTG+AGG | 0.491015 | tig0029054:-51699 | None:intergenic |
| CTTGAAATTGACCATTTGAC+CGG | 0.491863 | tig0029054:-51410 | None:intergenic |
| AAAGTCTCCATTCACTGCGC+AGG | 0.492565 | tig0029054:+50502 | Msa1440300:CDS |
| AGTGGTGTTACCAGCCAAAC+CGG | 0.494179 | tig0029054:+51148 | Msa1440300:CDS |
| GGTTCAGGTAACCGGTCAAA+TGG | 0.494989 | tig0029054:+51380 | Msa1440300:CDS |
| TGAACACTTCCGTGATGCAC+CGG | 0.507152 | tig0029054:+51349 | Msa1440300:CDS |
| AAGCGTACTTTGAAATTGAT+GGG | 0.509913 | tig0029054:-50229 | None:intergenic |
| CATTTGAAAGTTTGAAGTGA+AGG | 0.514068 | tig0029054:-50296 | None:intergenic |
| TATCCTAGCAGCAGTAGTTA+CGG | 0.527016 | tig0029054:+51587 | Msa1440300:CDS |
| GCTAAAAGCGGCAACGGAAG+CGG | 0.527918 | tig0029054:+51029 | Msa1440300:CDS |
| ATACGCGCATGTGATGAATA+CGG | 0.539599 | tig0029054:+51643 | Msa1440300:CDS |
| ACCGGTTCAACCGGTAACAC+TGG | 0.546173 | tig0029054:+51239 | Msa1440300:CDS |
| GCAGCAGCAAAATGAGATTG+AGG | 0.556418 | tig0029054:-51549 | None:intergenic |
| TACGCGCATGTGATGAATAC+GGG | 0.564097 | tig0029054:+51644 | Msa1440300:CDS |
| TGCGCGTATTGATACGGTTG+TGG | 0.564403 | tig0029054:-51648 | None:intergenic |
| GGACCATAGTACTGCTGCGG+TGG | 0.574403 | tig0029054:-51525 | None:intergenic |
| CCAACGAAGGTTCCACAACC+GGG | 0.575422 | tig0029054:+51072 | Msa1440300:CDS |
| GAACACTTCCGTGATGCACC+GGG | 0.582325 | tig0029054:+51350 | Msa1440300:CDS |
| GCACCGTAACTACTGCTGCT+AGG | 0.585225 | tig0029054:-51609 | None:intergenic |
| TGCTAGGATACGCTGTATGA+TGG | 0.586279 | tig0029054:-51593 | None:intergenic |
| AACACCGCTAAAAGCGGCAA+CGG | 0.586332 | tig0029054:+51023 | Msa1440300:CDS |
| TTACCTGAACCACCAGTACC+CGG | 0.601937 | tig0029054:-51387 | None:intergenic |
| CACCAGTACCCGGTGCATCA+CGG | 0.602569 | tig0029054:-51377 | None:intergenic |
| CGTGATGCACCGGGTACTGG+TGG | 0.603532 | tig0029054:+51359 | Msa1440300:CDS |
| TTCACAACATCTCAACTACA+AGG | 0.605083 | tig0029054:+50348 | Msa1440300:CDS |
| ATGAAATGGAGCCTCAGCCA+AGG | 0.607085 | tig0029054:+51669 | Msa1440300:CDS |
| GACCATAGTACTGCTGCGGT+GGG | 0.614420 | tig0029054:-51524 | None:intergenic |
| AACGGCAACACCGCTAAAAG+CGG | 0.614579 | tig0029054:+51017 | Msa1440300:CDS |
| AACAGTGAAAACAACAACAA+CGG | 0.621781 | tig0029054:+50951 | Msa1440300:CDS |
| TTCAGCTTGTGTCTCTGATG+CGG | 0.631924 | tig0029054:-50320 | None:intergenic |
| AAAATTCTTCAAAACATACA+AGG | 0.632084 | tig0029054:+50544 | Msa1440300:CDS |
| ACAAACTGACCAACAAGACA+GGG | 0.636532 | tig0029054:+50802 | Msa1440300:CDS |
| ATACGCTGTATGATGGCTCA+CGG | 0.643410 | tig0029054:-51586 | None:intergenic |
| AACACTGGTGGTGATAGCAG+TGG | 0.644515 | tig0029054:+51254 | Msa1440300:CDS |
| TGGCTCACGGTAACAACCGG+TGG | 0.659488 | tig0029054:-51573 | None:intergenic |
| GCGTATTGATACGGTTGTGG+AGG | 0.666718 | tig0029054:-51645 | None:intergenic |
| GGTTCAACCGGTAACACTGG+TGG | 0.667820 | tig0029054:+51242 | Msa1440300:CDS |
| CTCTTGAACATGTACCACGC+CGG | 0.671118 | tig0029054:-51118 | None:intergenic |
| GCAGCAAAATGAGATTGAGG+AGG | 0.681939 | tig0029054:-51546 | None:intergenic |
| GGAGGACCATAGTACTGCTG+CGG | 0.694016 | tig0029054:-51528 | None:intergenic |
| AGAGGTGAGAAAGCAAACAG+TGG | 0.698353 | tig0029054:+51130 | Msa1440300:CDS |
| AAAGTTAACAAACCCAACGA+AGG | 0.699189 | tig0029054:+51059 | Msa1440300:CDS |
| TGTTCAAGAGCTAAAGCCAG+AGG | 0.702356 | tig0029054:+51112 | Msa1440300:CDS |
| CACAACCGGGAAAACCGGCG+TGG | 0.709165 | tig0029054:+51085 | Msa1440300:CDS |
| TGTTCGTTAATGTAATGACG+TGG | 0.709464 | tig0029054:-51495 | None:intergenic |
| TCGTTAATGTAATGACGTGG+CGG | 0.723759 | tig0029054:-51492 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATGAAAGTAAAAAATAA+AGG | - | tig0029054:50603-50622 | None:intergenic | 10.0% |
| !! | AAAATGAAAGTAAAAAATAA+AGG | - | tig0029054:50603-50622 | None:intergenic | 10.0% |
| !! | AAAATTCTTCAAAACATACA+AGG | + | tig0029054:50544-50563 | Msa1440300:CDS | 20.0% |
| !! | CAAAGAATGAATACTAAAAA+TGG | - | tig0029054:50645-50664 | None:intergenic | 20.0% |
| !!! | TTTTAGTATTCATTCTTTGA+AGG | + | tig0029054:50646-50665 | Msa1440300:intron | 20.0% |
| !! | TTTAGTATTCATTCTTTGAA+GGG | + | tig0029054:50647-50666 | Msa1440300:intron | 20.0% |
| !!! | TTTATACTTTTCTGTAATCT+AGG | + | tig0029054:50702-50721 | Msa1440300:intron | 20.0% |
| !! | TGAAAAAGAAGAAAAAGAAA+GGG | + | tig0029054:51279-51298 | Msa1440300:CDS | 20.0% |
| !! | AAAATTCTTCAAAACATACA+AGG | + | tig0029054:50544-50563 | Msa1440300:CDS | 20.0% |
| !! | CAAAGAATGAATACTAAAAA+TGG | - | tig0029054:50645-50664 | None:intergenic | 20.0% |
| !!! | TTTTAGTATTCATTCTTTGA+AGG | + | tig0029054:50646-50665 | Msa1440300:intron | 20.0% |
| !! | TTTAGTATTCATTCTTTGAA+GGG | + | tig0029054:50647-50666 | Msa1440300:intron | 20.0% |
| !!! | TTTATACTTTTCTGTAATCT+AGG | + | tig0029054:50702-50721 | Msa1440300:intron | 20.0% |
| !! | TGAAAAAGAAGAAAAAGAAA+GGG | + | tig0029054:51279-51298 | Msa1440300:CDS | 20.0% |
| ! | AATGAAATGAAAGTAAGAGA+TGG | - | tig0029054:50387-50406 | None:intergenic | 25.0% |
| ! | GCAACAAAAAGTAATAGTAA+CGG | + | tig0029054:50752-50771 | Msa1440300:CDS | 25.0% |
| ! | CAACAAAAAGTAATAGTAAC+GGG | + | tig0029054:50753-50772 | Msa1440300:CDS | 25.0% |
| ! | AACAAAAAGTAATAGTAACG+GGG | + | tig0029054:50754-50773 | Msa1440300:CDS | 25.0% |
| !!! | TTCTTCTTTTTTGATTCTGT+TGG | - | tig0029054:50852-50871 | None:intergenic | 25.0% |
| ! | GTGAAAAAGAAGAAAAAGAA+AGG | + | tig0029054:51278-51297 | Msa1440300:CDS | 25.0% |
| !! | GTCAAAGTAGTAATTTTCAT+GGG | + | tig0029054:51414-51433 | Msa1440300:CDS | 25.0% |
| ! | AATGAAATGAAAGTAAGAGA+TGG | - | tig0029054:50387-50406 | None:intergenic | 25.0% |
| ! | GCAACAAAAAGTAATAGTAA+CGG | + | tig0029054:50752-50771 | Msa1440300:CDS | 25.0% |
| ! | CAACAAAAAGTAATAGTAAC+GGG | + | tig0029054:50753-50772 | Msa1440300:CDS | 25.0% |
| ! | AACAAAAAGTAATAGTAACG+GGG | + | tig0029054:50754-50773 | Msa1440300:CDS | 25.0% |
| !!! | TTCTTCTTTTTTGATTCTGT+TGG | - | tig0029054:50852-50871 | None:intergenic | 25.0% |
| ! | GTGAAAAAGAAGAAAAAGAA+AGG | + | tig0029054:51278-51297 | Msa1440300:CDS | 25.0% |
| !! | GTCAAAGTAGTAATTTTCAT+GGG | + | tig0029054:51414-51433 | Msa1440300:CDS | 25.0% |
| !! | AAGCGTACTTTGAAATTGAT+GGG | - | tig0029054:50232-50251 | None:intergenic | 30.0% |
| !! | AAAGCGTACTTTGAAATTGA+TGG | - | tig0029054:50233-50252 | None:intergenic | 30.0% |
| ! | CATTTGAAAGTTTGAAGTGA+AGG | - | tig0029054:50299-50318 | None:intergenic | 30.0% |
| CTTCACTTCAAACTTTCAAA+TGG | + | tig0029054:50297-50316 | Msa1440300:exon | 30.0% | |
| !!! | TTTTTTGATTCTGTTGGTTC+AGG | - | tig0029054:50846-50865 | None:intergenic | 30.0% |
| AACAGTGAAAACAACAACAA+CGG | + | tig0029054:50951-50970 | Msa1440300:CDS | 30.0% | |
| AAGAAGAAAAAGAAAGGGAA+AGG | + | tig0029054:51284-51303 | Msa1440300:CDS | 30.0% | |
| ! | GGTCAAAGTAGTAATTTTCA+TGG | + | tig0029054:51413-51432 | Msa1440300:CDS | 30.0% |
| !! | AAGCGTACTTTGAAATTGAT+GGG | - | tig0029054:50232-50251 | None:intergenic | 30.0% |
| !! | AAAGCGTACTTTGAAATTGA+TGG | - | tig0029054:50233-50252 | None:intergenic | 30.0% |
| ! | CATTTGAAAGTTTGAAGTGA+AGG | - | tig0029054:50299-50318 | None:intergenic | 30.0% |
| CTTCACTTCAAACTTTCAAA+TGG | + | tig0029054:50297-50316 | Msa1440300:exon | 30.0% | |
| !!! | TTTTTTGATTCTGTTGGTTC+AGG | - | tig0029054:50846-50865 | None:intergenic | 30.0% |
| AACAGTGAAAACAACAACAA+CGG | + | tig0029054:50951-50970 | Msa1440300:CDS | 30.0% | |
| AAGAAGAAAAAGAAAGGGAA+AGG | + | tig0029054:51284-51303 | Msa1440300:CDS | 30.0% | |
| ! | GGTCAAAGTAGTAATTTTCA+TGG | + | tig0029054:51413-51432 | Msa1440300:CDS | 30.0% |
| ! | AGTTTGAAGTGAAGGAGAAA+AGG | - | tig0029054:50291-50310 | None:intergenic | 35.0% |
| TTCACAACATCTCAACTACA+AGG | + | tig0029054:50348-50367 | Msa1440300:CDS | 35.0% | |
| AACAAGTTTAGAAGCAGTTG+AGG | - | tig0029054:50449-50468 | None:intergenic | 35.0% | |
| !! | TCTTTGTTCTTCTCTGGTTT+TGG | - | tig0029054:50879-50898 | None:intergenic | 35.0% |
| TGTTTCTCTTTGTTCTTCTC+TGG | - | tig0029054:50885-50904 | None:intergenic | 35.0% | |
| ! | TCCAAGAACGTTCAAGTTAA+CGG | + | tig0029054:50999-51018 | Msa1440300:CDS | 35.0% |
| AAAGTTAACAAACCCAACGA+AGG | + | tig0029054:51059-51078 | Msa1440300:CDS | 35.0% | |
| GGTTCTTCATTATCATCGTT+AGG | - | tig0029054:51209-51228 | None:intergenic | 35.0% | |
| GAAGAACCATTTGAGAAAAC+CGG | + | tig0029054:51221-51240 | Msa1440300:CDS | 35.0% | |
| CTTGAAATTGACCATTTGAC+CGG | - | tig0029054:51394-51413 | None:intergenic | 35.0% | |
| TGTTCGTTAATGTAATGACG+TGG | - | tig0029054:51479-51498 | None:intergenic | 35.0% | |
| GATGAATACGGGAAATGAAA+TGG | + | tig0029054:51655-51674 | Msa1440300:CDS | 35.0% | |
| ! | AGTTTGAAGTGAAGGAGAAA+AGG | - | tig0029054:50291-50310 | None:intergenic | 35.0% |
| TTCACAACATCTCAACTACA+AGG | + | tig0029054:50348-50367 | Msa1440300:CDS | 35.0% | |
| AACAAGTTTAGAAGCAGTTG+AGG | - | tig0029054:50449-50468 | None:intergenic | 35.0% | |
| !! | TCTTTGTTCTTCTCTGGTTT+TGG | - | tig0029054:50879-50898 | None:intergenic | 35.0% |
| TGTTTCTCTTTGTTCTTCTC+TGG | - | tig0029054:50885-50904 | None:intergenic | 35.0% | |
| ! | TCCAAGAACGTTCAAGTTAA+CGG | + | tig0029054:50999-51018 | Msa1440300:CDS | 35.0% |
| AAAGTTAACAAACCCAACGA+AGG | + | tig0029054:51059-51078 | Msa1440300:CDS | 35.0% | |
| GGTTCTTCATTATCATCGTT+AGG | - | tig0029054:51209-51228 | None:intergenic | 35.0% | |
| GAAGAACCATTTGAGAAAAC+CGG | + | tig0029054:51221-51240 | Msa1440300:CDS | 35.0% | |
| CTTGAAATTGACCATTTGAC+CGG | - | tig0029054:51394-51413 | None:intergenic | 35.0% | |
| TGTTCGTTAATGTAATGACG+TGG | - | tig0029054:51479-51498 | None:intergenic | 35.0% | |
| GATGAATACGGGAAATGAAA+TGG | + | tig0029054:51655-51674 | Msa1440300:CDS | 35.0% | |
| ! | TACGGAAGAGTACGTTGTTA+GGG | - | tig0029054:50418-50437 | None:intergenic | 40.0% |
| GCAGTTGAGGAAGAATAGTA+CGG | - | tig0029054:50436-50455 | None:intergenic | 40.0% | |
| CAGTTGTCTGAGAGACAAAA+TGG | - | tig0029054:50477-50496 | None:intergenic | 40.0% | |
| ACAAACTGACCAACAAGACA+GGG | + | tig0029054:50802-50821 | Msa1440300:CDS | 40.0% | |
| GAAAACAACAACAACGGAAC+AGG | + | tig0029054:50957-50976 | Msa1440300:CDS | 40.0% | |
| AACTTGAACGTTCTTGGATG+TGG | - | tig0029054:50997-51016 | None:intergenic | 40.0% | |
| !!! | CTAACTTTTTTCTCGGCTAC+CGG | - | tig0029054:51170-51189 | None:intergenic | 40.0% |
| !!! | TGCGACGCTAACTTTTTTCT+CGG | - | tig0029054:51177-51196 | None:intergenic | 40.0% |
| !! | GTTGAACCGGTTTTCTCAAA+TGG | - | tig0029054:51230-51249 | None:intergenic | 40.0% |
| ! | TTTGAGAAAACCGGTTCAAC+CGG | + | tig0029054:51230-51249 | Msa1440300:CDS | 40.0% |
| CGGTCAAATGGTCAATTTCA+AGG | + | tig0029054:51392-51411 | Msa1440300:CDS | 40.0% | |
| TTTCATGGGCAAGTACATTC+AGG | + | tig0029054:51428-51447 | Msa1440300:CDS | 40.0% | |
| TCGTTAATGTAATGACGTGG+CGG | - | tig0029054:51476-51495 | None:intergenic | 40.0% | |
| TATCCTAGCAGCAGTAGTTA+CGG | + | tig0029054:51587-51606 | Msa1440300:CDS | 40.0% | |
| ! | ATCACATGCGCGTATTGATA+CGG | - | tig0029054:51638-51657 | None:intergenic | 40.0% |
| ATACGCGCATGTGATGAATA+CGG | + | tig0029054:51643-51662 | Msa1440300:CDS | 40.0% | |
| ! | TACGGAAGAGTACGTTGTTA+GGG | - | tig0029054:50418-50437 | None:intergenic | 40.0% |
| GCAGTTGAGGAAGAATAGTA+CGG | - | tig0029054:50436-50455 | None:intergenic | 40.0% | |
| CAGTTGTCTGAGAGACAAAA+TGG | - | tig0029054:50477-50496 | None:intergenic | 40.0% | |
| ACAAACTGACCAACAAGACA+GGG | + | tig0029054:50802-50821 | Msa1440300:CDS | 40.0% | |
| GAAAACAACAACAACGGAAC+AGG | + | tig0029054:50957-50976 | Msa1440300:CDS | 40.0% | |
| AACTTGAACGTTCTTGGATG+TGG | - | tig0029054:50997-51016 | None:intergenic | 40.0% | |
| !!! | CTAACTTTTTTCTCGGCTAC+CGG | - | tig0029054:51170-51189 | None:intergenic | 40.0% |
| !!! | TGCGACGCTAACTTTTTTCT+CGG | - | tig0029054:51177-51196 | None:intergenic | 40.0% |
| !! | GTTGAACCGGTTTTCTCAAA+TGG | - | tig0029054:51230-51249 | None:intergenic | 40.0% |
| ! | TTTGAGAAAACCGGTTCAAC+CGG | + | tig0029054:51230-51249 | Msa1440300:CDS | 40.0% |
| CGGTCAAATGGTCAATTTCA+AGG | + | tig0029054:51392-51411 | Msa1440300:CDS | 40.0% | |
| TTTCATGGGCAAGTACATTC+AGG | + | tig0029054:51428-51447 | Msa1440300:CDS | 40.0% | |
| TCGTTAATGTAATGACGTGG+CGG | - | tig0029054:51476-51495 | None:intergenic | 40.0% | |
| TATCCTAGCAGCAGTAGTTA+CGG | + | tig0029054:51587-51606 | Msa1440300:CDS | 40.0% | |
| ! | ATCACATGCGCGTATTGATA+CGG | - | tig0029054:51638-51657 | None:intergenic | 40.0% |
| ATACGCGCATGTGATGAATA+CGG | + | tig0029054:51643-51662 | Msa1440300:CDS | 40.0% | |
| TTCAGCTTGTGTCTCTGATG+CGG | - | tig0029054:50323-50342 | None:intergenic | 45.0% | |
| ! | GTACGGAAGAGTACGTTGTT+AGG | - | tig0029054:50419-50438 | None:intergenic | 45.0% |
| ! | CTGTCTTGTTGGTCAGTTTG+TGG | - | tig0029054:50803-50822 | None:intergenic | 45.0% |
| CACAAACTGACCAACAAGAC+AGG | + | tig0029054:50801-50820 | Msa1440300:CDS | 45.0% | |
| AACATGCTTCCCTGTCTTGT+TGG | - | tig0029054:50814-50833 | None:intergenic | 45.0% | |
| ! | GCCGTTAACTTGAACGTTCT+TGG | - | tig0029054:51003-51022 | None:intergenic | 45.0% |
| TGTTCAAGAGCTAAAGCCAG+AGG | + | tig0029054:51112-51131 | Msa1440300:CDS | 45.0% | |
| ACTGTTTGCTTTCTCACCTC+TGG | - | tig0029054:51131-51150 | None:intergenic | 45.0% | |
| AGAGGTGAGAAAGCAAACAG+TGG | + | tig0029054:51130-51149 | Msa1440300:CDS | 45.0% | |
| !!! | TTTTTTCTCGGCTACCGGTT+TGG | - | tig0029054:51165-51184 | None:intergenic | 45.0% |
| GCAGCAAAATGAGATTGAGG+AGG | - | tig0029054:51530-51549 | None:intergenic | 45.0% | |
| GCAGCAGCAAAATGAGATTG+AGG | - | tig0029054:51533-51552 | None:intergenic | 45.0% | |
| ATACGCTGTATGATGGCTCA+CGG | - | tig0029054:51570-51589 | None:intergenic | 45.0% | |
| TGCTAGGATACGCTGTATGA+TGG | - | tig0029054:51577-51596 | None:intergenic | 45.0% | |
| TACGCGCATGTGATGAATAC+GGG | + | tig0029054:51644-51663 | Msa1440300:CDS | 45.0% | |
| TTCAGCTTGTGTCTCTGATG+CGG | - | tig0029054:50323-50342 | None:intergenic | 45.0% | |
| ! | GTACGGAAGAGTACGTTGTT+AGG | - | tig0029054:50419-50438 | None:intergenic | 45.0% |
| ! | CTGTCTTGTTGGTCAGTTTG+TGG | - | tig0029054:50803-50822 | None:intergenic | 45.0% |
| CACAAACTGACCAACAAGAC+AGG | + | tig0029054:50801-50820 | Msa1440300:CDS | 45.0% | |
| AACATGCTTCCCTGTCTTGT+TGG | - | tig0029054:50814-50833 | None:intergenic | 45.0% | |
| ! | GCCGTTAACTTGAACGTTCT+TGG | - | tig0029054:51003-51022 | None:intergenic | 45.0% |
| TGTTCAAGAGCTAAAGCCAG+AGG | + | tig0029054:51112-51131 | Msa1440300:CDS | 45.0% | |
| ACTGTTTGCTTTCTCACCTC+TGG | - | tig0029054:51131-51150 | None:intergenic | 45.0% | |
| AGAGGTGAGAAAGCAAACAG+TGG | + | tig0029054:51130-51149 | Msa1440300:CDS | 45.0% | |
| !!! | TTTTTTCTCGGCTACCGGTT+TGG | - | tig0029054:51165-51184 | None:intergenic | 45.0% |
| GCAGCAAAATGAGATTGAGG+AGG | - | tig0029054:51530-51549 | None:intergenic | 45.0% | |
| GCAGCAGCAAAATGAGATTG+AGG | - | tig0029054:51533-51552 | None:intergenic | 45.0% | |
| ATACGCTGTATGATGGCTCA+CGG | - | tig0029054:51570-51589 | None:intergenic | 45.0% | |
| TGCTAGGATACGCTGTATGA+TGG | - | tig0029054:51577-51596 | None:intergenic | 45.0% | |
| TACGCGCATGTGATGAATAC+GGG | + | tig0029054:51644-51663 | Msa1440300:CDS | 45.0% | |
| AAAGTCTCCATTCACTGCGC+AGG | + | tig0029054:50502-50521 | Msa1440300:CDS | 50.0% | |
| ! | CAGGGAAGCATGTTGAGCTT+TGG | + | tig0029054:50820-50839 | Msa1440300:CDS | 50.0% |
| AACGGCAACACCGCTAAAAG+CGG | + | tig0029054:51017-51036 | Msa1440300:CDS | 50.0% | |
| AACACCGCTAAAAGCGGCAA+CGG | + | tig0029054:51023-51042 | Msa1440300:CDS | 50.0% | |
| CTCTTGAACATGTACCACGC+CGG | - | tig0029054:51102-51121 | None:intergenic | 50.0% | |
| !! | AGTGGTGTTACCAGCCAAAC+CGG | + | tig0029054:51148-51167 | Msa1440300:CDS | 50.0% |
| ! | ACCAGTGTTACCGGTTGAAC+CGG | - | tig0029054:51243-51262 | None:intergenic | 50.0% |
| GCTATCACCACCAGTGTTAC+CGG | - | tig0029054:51252-51271 | None:intergenic | 50.0% | |
| ! | AACACTGGTGGTGATAGCAG+TGG | + | tig0029054:51254-51273 | Msa1440300:CDS | 50.0% |
| TGAACACTTCCGTGATGCAC+CGG | + | tig0029054:51349-51368 | Msa1440300:CDS | 50.0% | |
| TTACCTGAACCACCAGTACC+CGG | - | tig0029054:51371-51390 | None:intergenic | 50.0% | |
| ! | GTACTGGTGGTTCAGGTAAC+CGG | + | tig0029054:51372-51391 | Msa1440300:CDS | 50.0% |
| GGTTCAGGTAACCGGTCAAA+TGG | + | tig0029054:51380-51399 | Msa1440300:CDS | 50.0% | |
| ! | GTGGCGGTACTTCATTGGTT+AGG | - | tig0029054:51460-51479 | None:intergenic | 50.0% |
| ATGACGTGGCGGTACTTCAT+TGG | - | tig0029054:51465-51484 | None:intergenic | 50.0% | |
| ! | TCATTTTGCTGCTGCTCCAC+CGG | + | tig0029054:51538-51557 | Msa1440300:CDS | 50.0% |
| TGATGGCTCACGGTAACAAC+CGG | - | tig0029054:51560-51579 | None:intergenic | 50.0% | |
| ! | GCGTATTGATACGGTTGTGG+AGG | - | tig0029054:51629-51648 | None:intergenic | 50.0% |
| ! | TGCGCGTATTGATACGGTTG+TGG | - | tig0029054:51632-51651 | None:intergenic | 50.0% |
| ATGAAATGGAGCCTCAGCCA+AGG | + | tig0029054:51669-51688 | Msa1440300:CDS | 50.0% | |
| AAAGTCTCCATTCACTGCGC+AGG | + | tig0029054:50502-50521 | Msa1440300:CDS | 50.0% | |
| ! | CAGGGAAGCATGTTGAGCTT+TGG | + | tig0029054:50820-50839 | Msa1440300:CDS | 50.0% |
| AACGGCAACACCGCTAAAAG+CGG | + | tig0029054:51017-51036 | Msa1440300:CDS | 50.0% | |
| AACACCGCTAAAAGCGGCAA+CGG | + | tig0029054:51023-51042 | Msa1440300:CDS | 50.0% | |
| CTCTTGAACATGTACCACGC+CGG | - | tig0029054:51102-51121 | None:intergenic | 50.0% | |
| !! | AGTGGTGTTACCAGCCAAAC+CGG | + | tig0029054:51148-51167 | Msa1440300:CDS | 50.0% |
| ! | ACCAGTGTTACCGGTTGAAC+CGG | - | tig0029054:51243-51262 | None:intergenic | 50.0% |
| GCTATCACCACCAGTGTTAC+CGG | - | tig0029054:51252-51271 | None:intergenic | 50.0% | |
| ! | AACACTGGTGGTGATAGCAG+TGG | + | tig0029054:51254-51273 | Msa1440300:CDS | 50.0% |
| TGAACACTTCCGTGATGCAC+CGG | + | tig0029054:51349-51368 | Msa1440300:CDS | 50.0% | |
| TTACCTGAACCACCAGTACC+CGG | - | tig0029054:51371-51390 | None:intergenic | 50.0% | |
| ! | GTACTGGTGGTTCAGGTAAC+CGG | + | tig0029054:51372-51391 | Msa1440300:CDS | 50.0% |
| GGTTCAGGTAACCGGTCAAA+TGG | + | tig0029054:51380-51399 | Msa1440300:CDS | 50.0% | |
| ! | GTGGCGGTACTTCATTGGTT+AGG | - | tig0029054:51460-51479 | None:intergenic | 50.0% |
| ATGACGTGGCGGTACTTCAT+TGG | - | tig0029054:51465-51484 | None:intergenic | 50.0% | |
| ! | TCATTTTGCTGCTGCTCCAC+CGG | + | tig0029054:51538-51557 | Msa1440300:CDS | 50.0% |
| TGATGGCTCACGGTAACAAC+CGG | - | tig0029054:51560-51579 | None:intergenic | 50.0% | |
| ! | GCGTATTGATACGGTTGTGG+AGG | - | tig0029054:51629-51648 | None:intergenic | 50.0% |
| ! | TGCGCGTATTGATACGGTTG+TGG | - | tig0029054:51632-51651 | None:intergenic | 50.0% |
| ATGAAATGGAGCCTCAGCCA+AGG | + | tig0029054:51669-51688 | Msa1440300:CDS | 50.0% | |
| !!! | GCTTCCGTTGCCGCTTTTAG+CGG | - | tig0029054:51030-51049 | None:intergenic | 55.0% |
| GCTAAAAGCGGCAACGGAAG+CGG | + | tig0029054:51029-51048 | Msa1440300:CDS | 55.0% | |
| CCGGTTGTGGAACCTTCGTT+GGG | - | tig0029054:51074-51093 | None:intergenic | 55.0% | |
| CCCAACGAAGGTTCCACAAC+CGG | + | tig0029054:51071-51090 | Msa1440300:CDS | 55.0% | |
| CCAACGAAGGTTCCACAACC+GGG | + | tig0029054:51072-51091 | Msa1440300:CDS | 55.0% | |
| GGTTCCACAACCGGGAAAAC+CGG | + | tig0029054:51080-51099 | Msa1440300:CDS | 55.0% | |
| !!! | ATGTACCACGCCGGTTTTCC+CGG | - | tig0029054:51093-51112 | None:intergenic | 55.0% |
| ! | ACCGGTTCAACCGGTAACAC+TGG | + | tig0029054:51239-51258 | Msa1440300:CDS | 55.0% |
| GGTTCAACCGGTAACACTGG+TGG | + | tig0029054:51242-51261 | Msa1440300:CDS | 55.0% | |
| GAACACTTCCGTGATGCACC+GGG | + | tig0029054:51350-51369 | Msa1440300:CDS | 55.0% | |
| GACCATAGTACTGCTGCGGT+GGG | - | tig0029054:51508-51527 | None:intergenic | 55.0% | |
| GGAGGACCATAGTACTGCTG+CGG | - | tig0029054:51512-51531 | None:intergenic | 55.0% | |
| GCACCGTAACTACTGCTGCT+AGG | - | tig0029054:51593-51612 | None:intergenic | 55.0% | |
| !!! | GCTTCCGTTGCCGCTTTTAG+CGG | - | tig0029054:51030-51049 | None:intergenic | 55.0% |
| GCTAAAAGCGGCAACGGAAG+CGG | + | tig0029054:51029-51048 | Msa1440300:CDS | 55.0% | |
| CCGGTTGTGGAACCTTCGTT+GGG | - | tig0029054:51074-51093 | None:intergenic | 55.0% | |
| CCCAACGAAGGTTCCACAAC+CGG | + | tig0029054:51071-51090 | Msa1440300:CDS | 55.0% | |
| CCAACGAAGGTTCCACAACC+GGG | + | tig0029054:51072-51091 | Msa1440300:CDS | 55.0% | |
| GGTTCCACAACCGGGAAAAC+CGG | + | tig0029054:51080-51099 | Msa1440300:CDS | 55.0% | |
| !!! | ATGTACCACGCCGGTTTTCC+CGG | - | tig0029054:51093-51112 | None:intergenic | 55.0% |
| ! | ACCGGTTCAACCGGTAACAC+TGG | + | tig0029054:51239-51258 | Msa1440300:CDS | 55.0% |
| GGTTCAACCGGTAACACTGG+TGG | + | tig0029054:51242-51261 | Msa1440300:CDS | 55.0% | |
| GAACACTTCCGTGATGCACC+GGG | + | tig0029054:51350-51369 | Msa1440300:CDS | 55.0% | |
| GACCATAGTACTGCTGCGGT+GGG | - | tig0029054:51508-51527 | None:intergenic | 55.0% | |
| GGAGGACCATAGTACTGCTG+CGG | - | tig0029054:51512-51531 | None:intergenic | 55.0% | |
| GCACCGTAACTACTGCTGCT+AGG | - | tig0029054:51593-51612 | None:intergenic | 55.0% | |
| CTTGCAGCCTGCGCAGTGAA+TGG | - | tig0029054:50512-50531 | None:intergenic | 60.0% | |
| CCCGGTTGTGGAACCTTCGT+TGG | - | tig0029054:51075-51094 | None:intergenic | 60.0% | |
| !! | TTCTCGGCTACCGGTTTGGC+TGG | - | tig0029054:51161-51180 | None:intergenic | 60.0% |
| TTCCGTGATGCACCGGGTAC+TGG | + | tig0029054:51356-51375 | Msa1440300:CDS | 60.0% | |
| CACCAGTACCCGGTGCATCA+CGG | - | tig0029054:51361-51380 | None:intergenic | 60.0% | |
| CACCCACCGCAGCAGTACTA+TGG | + | tig0029054:51503-51522 | Msa1440300:CDS | 60.0% | |
| GGACCATAGTACTGCTGCGG+TGG | - | tig0029054:51509-51528 | None:intergenic | 60.0% | |
| TGGCTCACGGTAACAACCGG+TGG | - | tig0029054:51557-51576 | None:intergenic | 60.0% | |
| TACGTGTACGGCCTTGGCTG+AGG | - | tig0029054:51683-51702 | None:intergenic | 60.0% | |
| CTTGCAGCCTGCGCAGTGAA+TGG | - | tig0029054:50512-50531 | None:intergenic | 60.0% | |
| CCCGGTTGTGGAACCTTCGT+TGG | - | tig0029054:51075-51094 | None:intergenic | 60.0% | |
| !! | TTCTCGGCTACCGGTTTGGC+TGG | - | tig0029054:51161-51180 | None:intergenic | 60.0% |
| TTCCGTGATGCACCGGGTAC+TGG | + | tig0029054:51356-51375 | Msa1440300:CDS | 60.0% | |
| CACCAGTACCCGGTGCATCA+CGG | - | tig0029054:51361-51380 | None:intergenic | 60.0% | |
| CACCCACCGCAGCAGTACTA+TGG | + | tig0029054:51503-51522 | Msa1440300:CDS | 60.0% | |
| GGACCATAGTACTGCTGCGG+TGG | - | tig0029054:51509-51528 | None:intergenic | 60.0% | |
| TGGCTCACGGTAACAACCGG+TGG | - | tig0029054:51557-51576 | None:intergenic | 60.0% | |
| TACGTGTACGGCCTTGGCTG+AGG | - | tig0029054:51683-51702 | None:intergenic | 60.0% | |
| !!! | CACGCCGGTTTTCCCGGTTG+TGG | - | tig0029054:51087-51106 | None:intergenic | 65.0% |
| CACAACCGGGAAAACCGGCG+TGG | + | tig0029054:51085-51104 | Msa1440300:CDS | 65.0% | |
| !! | CGTGATGCACCGGGTACTGG+TGG | + | tig0029054:51359-51378 | Msa1440300:CDS | 65.0% |
| !! | GCACCGGGTACTGGTGGTTC+AGG | + | tig0029054:51365-51384 | Msa1440300:CDS | 65.0% |
| !!! | CACGCCGGTTTTCCCGGTTG+TGG | - | tig0029054:51087-51106 | None:intergenic | 65.0% |
| CACAACCGGGAAAACCGGCG+TGG | + | tig0029054:51085-51104 | Msa1440300:CDS | 65.0% | |
| !! | CGTGATGCACCGGGTACTGG+TGG | + | tig0029054:51359-51378 | Msa1440300:CDS | 65.0% |
| !! | GCACCGGGTACTGGTGGTTC+AGG | + | tig0029054:51365-51384 | Msa1440300:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0029054 | gene | 50204 | 51706 | 50204 | ID=Msa1440300;Name=Msa1440300 |
| tig0029054 | mRNA | 50204 | 51706 | 50204 | ID=Msa1440300-mRNA-1;Parent=Msa1440300;Name=Msa1440300-mRNA-1;_AED=0.05;_eAED=0.05;_QI=112|1|1|1|1|1|3|0|371 |
| tig0029054 | exon | 50204 | 50369 | 50204 | ID=Msa1440300-mRNA-1:exon:12172;Parent=Msa1440300-mRNA-1 |
| tig0029054 | exon | 50490 | 50565 | 50490 | ID=Msa1440300-mRNA-1:exon:12173;Parent=Msa1440300-mRNA-1 |
| tig0029054 | exon | 50724 | 51706 | 50724 | ID=Msa1440300-mRNA-1:exon:12174;Parent=Msa1440300-mRNA-1 |
| tig0029054 | five_prime_UTR | 50204 | 50315 | 50204 | ID=Msa1440300-mRNA-1:five_prime_utr;Parent=Msa1440300-mRNA-1 |
| tig0029054 | CDS | 50316 | 50369 | 50316 | ID=Msa1440300-mRNA-1:cds;Parent=Msa1440300-mRNA-1 |
| tig0029054 | CDS | 50490 | 50565 | 50490 | ID=Msa1440300-mRNA-1:cds;Parent=Msa1440300-mRNA-1 |
| tig0029054 | CDS | 50724 | 51706 | 50724 | ID=Msa1440300-mRNA-1:cds;Parent=Msa1440300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
