Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1443340 | sp|Q8BWQ6|VP35L_MOUSE | 25.821 | 883 | 588 | 19 | 50 | 893 | 87 | 941 | 1.89e-87 | 303 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1443340 | G7I8I5 | 96.906 | 905 | 28 | 0 | 1 | 905 | 1 | 905 | 0.0 | 1808 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0071730 | Msa1443340 | 0.884519 | 1.789700e-71 | -8.615850e-47 |
| Msa0157030 | Msa1443340 | -0.823226 | 1.552086e-53 | -8.615850e-47 |
| Msa0162720 | Msa1443340 | 0.941567 | 3.318448e-101 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1443340 | MtrunA17_Chr1g0177161 | 96.906 | 905 | 28 | 0 | 1 | 905 | 1 | 905 | 0.0 | 1808 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1443340 | AT1G50730.3 | 49.277 | 899 | 441 | 10 | 1 | 886 | 3 | 899 | 0.0 | 859 |
| Msa1443340 | AT1G50730.2 | 49.388 | 899 | 439 | 11 | 1 | 886 | 3 | 898 | 0.0 | 857 |
| Msa1443340 | AT1G50730.1 | 46.696 | 923 | 443 | 14 | 1 | 886 | 3 | 913 | 0.0 | 777 |
Find 205 sgRNAs with CRISPR-Local
Find 1185 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAATCCCATTTAGCATTTC+TGG | 0.117078 | tig0030427:-10025 | Msa1443340:CDS |
| CACCTTTATAGATAACTTTA+AGG | 0.152516 | tig0030427:+18459 | None:intergenic |
| TCTTTCCCTTAATAAATAAA+AGG | 0.176363 | tig0030427:+4731 | None:intergenic |
| ATCAATGTATATAAGTTATT+AGG | 0.206017 | tig0030427:+6643 | None:intergenic |
| TGAAGGAGTGGACCTCTTTC+AGG | 0.210115 | tig0030427:-21247 | Msa1443340:CDS |
| TGAGCAGGAGTGGTCATATT+AGG | 0.211051 | tig0030427:-10276 | Msa1443340:intron |
| TCATTCAAGTTGACAGGTTC+TGG | 0.230651 | tig0030427:+21290 | None:intergenic |
| TATAACTGGTTCAGCAAAAT+TGG | 0.232752 | tig0030427:-15026 | Msa1443340:CDS |
| AATCAACCAGAAATGCTAAA+TGG | 0.248125 | tig0030427:+10019 | None:intergenic |
| TGCATTACATCTAAGATTTC+AGG | 0.252312 | tig0030427:+10553 | None:intergenic |
| CCAGTTATAGCAAGTTTCTT+TGG | 0.257426 | tig0030427:+15040 | None:intergenic |
| GTAGATGGATTGATTGATTC+AGG | 0.272167 | tig0030427:-9230 | Msa1443340:CDS |
| AGAACTTGTTTCTTTGTCTA+AGG | 0.279416 | tig0030427:-5708 | Msa1443340:CDS |
| CTAAATTCATGTTACAATAT+AGG | 0.282539 | tig0030427:+4593 | None:intergenic |
| GTTGATTGCCGAGCAAATTT+TGG | 0.286667 | tig0030427:-10003 | Msa1443340:CDS |
| GGCAATGACATGTTATACTA+TGG | 0.294510 | tig0030427:-5749 | Msa1443340:CDS |
| TAATATGGAATTTACGAATA+AGG | 0.295478 | tig0030427:-10203 | Msa1443340:CDS |
| TTTGCAGGTTGCTAAGCTTT+TGG | 0.296869 | tig0030427:-17170 | Msa1443340:intron |
| ATGATTTGTGTTGGTTTAGT+TGG | 0.300449 | tig0030427:-4836 | Msa1443340:exon |
| GCTAATTGCTAGGTAGATTA+TGG | 0.302052 | tig0030427:-10057 | Msa1443340:intron |
| AGTACCTCGTCGCCATATTA+AGG | 0.311618 | tig0030427:+10497 | None:intergenic |
| TGCATATTGCCGTCTATATA+TGG | 0.317803 | tig0030427:-13885 | Msa1443340:CDS |
| TGTTCGTGAACTTCTAGTTT+AGG | 0.323360 | tig0030427:-4674 | Msa1443340:three_prime_UTR |
| TTATTAATTCCTCCTCTTAG+TGG | 0.326229 | tig0030427:+21332 | None:intergenic |
| TCAGGCTCTACATGATAATA+TGG | 0.329316 | tig0030427:-10218 | Msa1443340:CDS |
| GGCTTGGTTTCTCATGTAGA+TGG | 0.332714 | tig0030427:-9245 | Msa1443340:CDS |
| AACTTCTAGTTTAGGTTTGA+TGG | 0.333819 | tig0030427:-4666 | Msa1443340:three_prime_UTR |
| ATCCTTAAAGTTATCTATAA+AGG | 0.336969 | tig0030427:-18461 | Msa1443340:intron |
| ACCTGTGTATTTGCATGATA+TGG | 0.338887 | tig0030427:+6434 | None:intergenic |
| TTGTAACATGAATTTAGTTT+TGG | 0.342116 | tig0030427:-4587 | Msa1443340:three_prime_UTR |
| GGAGTGAAGGTGGAGGAGAG+AGG | 0.342206 | tig0030427:+22276 | None:intergenic |
| TTGAATTGCTAAAGAATTGC+TGG | 0.343695 | tig0030427:+9485 | None:intergenic |
| CAAAGAAAACTGACCATGAT+TGG | 0.345934 | tig0030427:+6614 | None:intergenic |
| TGGTAGATTCAACGAGCTTA+AGG | 0.346944 | tig0030427:-9983 | Msa1443340:intron |
| ACATGATTGGGGACCTGGTT+TGG | 0.347250 | tig0030427:-17087 | Msa1443340:CDS |
| CCAAAGAAACTTGCTATAAC+TGG | 0.347511 | tig0030427:-15040 | Msa1443340:CDS |
| AAGAACCATCATTGGTATCT+AGG | 0.353149 | tig0030427:-4712 | Msa1443340:three_prime_UTR |
| TGAGACTGTTTCATGTGTTT+CGG | 0.356103 | tig0030427:-12979 | Msa1443340:CDS |
| TGAATACTAAATTTCATTGA+TGG | 0.362502 | tig0030427:-22372 | Msa1443340:exon |
| ATTACAGATTGCTTGGGTTC+AGG | 0.363256 | tig0030427:-12736 | Msa1443340:CDS |
| ACCCAAGCAATCTGTAATTC+AGG | 0.365020 | tig0030427:+12741 | None:intergenic |
| GAACTTACTTTGTGCCGTTC+AGG | 0.366933 | tig0030427:-5675 | Msa1443340:CDS |
| CGTGAGATTCCTTCTCAGTT+TGG | 0.375524 | tig0030427:+22330 | None:intergenic |
| CTTTCCCTTAATAAATAAAA+GGG | 0.376553 | tig0030427:+4732 | None:intergenic |
| GAAATGGCCCCTGCAAAATC+TGG | 0.379974 | tig0030427:+4868 | None:intergenic |
| TCAATGTATATAAGTTATTA+GGG | 0.389929 | tig0030427:+6644 | None:intergenic |
| CAAGGATACTTCCTTTCATC+AGG | 0.391447 | tig0030427:-12871 | Msa1443340:intron |
| GAAGGCTGCTCGAGGAAGTA+TGG | 0.391500 | tig0030427:-5559 | Msa1443340:intron |
| GGATTGATTGATTCAGGAAT+TGG | 0.393033 | tig0030427:-9224 | Msa1443340:CDS |
| TCTACTTGCCTTACACTGAT+TGG | 0.395945 | tig0030427:-4964 | Msa1443340:CDS |
| GAGTGAAGGTGGAGGAGAGA+GGG | 0.399513 | tig0030427:+22277 | None:intergenic |
| GTTAACGTTGTTGTCGATGA+TGG | 0.401068 | tig0030427:-21374 | Msa1443340:CDS |
| CACCTGAATTACAGATTGCT+TGG | 0.403215 | tig0030427:-12743 | Msa1443340:CDS |
| AGATGGCATTATTGCCTTGC+TGG | 0.403338 | tig0030427:-13988 | Msa1443340:CDS |
| CTTGCTTTCTGAAATTTCTC+AGG | 0.405245 | tig0030427:-10236 | Msa1443340:CDS |
| CAGATATCATGGACATGATT+GGG | 0.406650 | tig0030427:-17099 | Msa1443340:CDS |
| AAGATGAAATTACCCGGTCT+TGG | 0.407882 | tig0030427:-18504 | Msa1443340:CDS |
| GCTGTGTAGCTTCTTAATTA+TGG | 0.411493 | tig0030427:-6884 | Msa1443340:CDS |
| TAAATTGTACCCTAGTTACT+TGG | 0.414897 | tig0030427:-14011 | Msa1443340:intron |
| GAGCAGGAGTGGTCATATTA+GGG | 0.415244 | tig0030427:-10275 | Msa1443340:intron |
| ACAGCATTGACAATGTTAAC+CGG | 0.415866 | tig0030427:+12695 | None:intergenic |
| GTGATGATGACAAGAGGATT+AGG | 0.418005 | tig0030427:-13923 | Msa1443340:CDS |
| TGACTGGAGGCATCTGTCTT+GGG | 0.419073 | tig0030427:+4918 | None:intergenic |
| CCACTTCTCATTAAAACATC+GGG | 0.421304 | tig0030427:+18746 | None:intergenic |
| TCTATGACAGAATAATCATT+TGG | 0.421480 | tig0030427:-10836 | Msa1443340:intron |
| TTGACTGGAGGCATCTGTCT+TGG | 0.422936 | tig0030427:+4917 | None:intergenic |
| TTAAGGGAAAGAACCATCAT+TGG | 0.424093 | tig0030427:-4720 | Msa1443340:three_prime_UTR |
| AAAGCAGAATTTACTGAAGA+TGG | 0.424473 | tig0030427:-17049 | Msa1443340:CDS |
| ACAGATATCATGGACATGAT+TGG | 0.425580 | tig0030427:-17100 | Msa1443340:CDS |
| GCTGCCAATGAAAGTACTCT+TGG | 0.430497 | tig0030427:-13591 | Msa1443340:CDS |
| CGAACTCCAACTGATGTTGA+AGG | 0.438158 | tig0030427:-6928 | Msa1443340:CDS |
| AAAGAGGTCCACTCCTTCAT+TGG | 0.441721 | tig0030427:+21251 | None:intergenic |
| AGTGAAGGTGGAGGAGAGAG+GGG | 0.446868 | tig0030427:+22278 | None:intergenic |
| TTGTGTTGGTTTAGTTGGAT+TGG | 0.451310 | tig0030427:-4831 | Msa1443340:three_prime_UTR |
| AAATCATACAGAAGTTGAAA+TGG | 0.453130 | tig0030427:+4852 | None:intergenic |
| ATCAACCAGAAATGCTAAAT+GGG | 0.453204 | tig0030427:+10020 | None:intergenic |
| GTGGATCATCTAGTTCCTCC+AGG | 0.454277 | tig0030427:+18596 | None:intergenic |
| ACCTGAATTACAGATTGCTT+GGG | 0.456091 | tig0030427:-12742 | Msa1443340:CDS |
| CATGGACATGATTGGGGACC+TGG | 0.456577 | tig0030427:-17092 | Msa1443340:CDS |
| TTATTAGGGAAGTAGGTAAC+TGG | 0.458592 | tig0030427:+6658 | None:intergenic |
| ATTTCCAAGAGTACTTTCAT+TGG | 0.458684 | tig0030427:+13587 | None:intergenic |
| TATATTTAGCGGGTTATCTC+AGG | 0.459289 | tig0030427:-13499 | Msa1443340:intron |
| CTCAAACTAATTAGTCCCAT+TGG | 0.459688 | tig0030427:+4769 | None:intergenic |
| TGTCCTTGTCACAGATATCA+TGG | 0.463735 | tig0030427:-17110 | Msa1443340:CDS |
| ACTCAATGGTTGGTTCCATC+AGG | 0.465265 | tig0030427:+13535 | None:intergenic |
| GTCAAGCTTGCAATCTCTCT+TGG | 0.467641 | tig0030427:-10752 | Msa1443340:CDS |
| AACTTCTGTATGATTTGTGT+TGG | 0.469380 | tig0030427:-4845 | Msa1443340:exon |
| AGTACTTTCATTGGCAGCTA+AGG | 0.469412 | tig0030427:+13596 | None:intergenic |
| TGTTAAATTCAATGAGATGA+AGG | 0.471505 | tig0030427:+12892 | None:intergenic |
| GTCACAATACCTTCTATCTC+TGG | 0.475427 | tig0030427:-9402 | Msa1443340:CDS |
| ACTTTACTCTGCAACTTGGC+AGG | 0.475735 | tig0030427:-17025 | Msa1443340:intron |
| GAAAGCAAGTGTATGCTTGT+CGG | 0.479025 | tig0030427:+10250 | None:intergenic |
| TGTCAAGGTGATTACTTGGC+AGG | 0.479086 | tig0030427:-18554 | Msa1443340:CDS |
| TTTACGAATAAGGATGATGA+TGG | 0.479887 | tig0030427:-10193 | Msa1443340:CDS |
| TGTCTCTGACCAGAGATAGA+AGG | 0.481574 | tig0030427:+9393 | None:intergenic |
| GAAGTAGGTAACTGGTACAC+TGG | 0.482207 | tig0030427:+6666 | None:intergenic |
| GCAACTTCATTCAAGTTGAC+AGG | 0.483928 | tig0030427:+21284 | None:intergenic |
| GAGGTTTCCTGTCTCGAAGA+TGG | 0.486763 | tig0030427:-21210 | Msa1443340:CDS |
| GTCAACTTGAATGAAGTTGC+TGG | 0.488279 | tig0030427:-21281 | Msa1443340:CDS |
| TTATGAAGTGTATATTTAGC+GGG | 0.492703 | tig0030427:-13509 | Msa1443340:CDS |
| TTCATAATATACTCAATGGT+TGG | 0.494321 | tig0030427:+13525 | None:intergenic |
| TTGCTTGTTTACAAGTTGAA+TGG | 0.494479 | tig0030427:+4894 | None:intergenic |
| GCTTTATGCGTTTCCAAACC+AGG | 0.495883 | tig0030427:+17074 | None:intergenic |
| AGTGAAACCATCTTCGAGAC+AGG | 0.496228 | tig0030427:+21203 | None:intergenic |
| TGCTGGTGATCCACCAATGA+AGG | 0.497736 | tig0030427:-21264 | Msa1443340:CDS |
| CTTGGGTTCAGGCTGTATGA+AGG | 0.497787 | tig0030427:-12725 | Msa1443340:CDS |
| AGCTTCTTAATTATGGTCCC+AGG | 0.498783 | tig0030427:-6877 | Msa1443340:intron |
| CGTTCAGGAAGAACCTTCTC+AGG | 0.502086 | tig0030427:-5660 | Msa1443340:intron |
| ACTTCTAGTTTAGGTTTGAT+GGG | 0.503671 | tig0030427:-4665 | Msa1443340:three_prime_UTR |
| TCCACCTTCACTCCTCCCAC+AGG | 0.504810 | tig0030427:-22267 | Msa1443340:intron |
| CATTAGTAGTCTCCTGAAAG+AGG | 0.506403 | tig0030427:+21235 | None:intergenic |
| TCCACTTCTCATTAAAACAT+CGG | 0.506577 | tig0030427:+18745 | None:intergenic |
| TCTTATACTTCAGAATCAAA+TGG | 0.510433 | tig0030427:-11313 | Msa1443340:intron |
| GGTCATCAGCAAGCCAAGAC+CGG | 0.510660 | tig0030427:+18491 | None:intergenic |
| GCAATGACATGTTATACTAT+GGG | 0.512454 | tig0030427:-5748 | Msa1443340:CDS |
| AATGAAGTTCTATCAGAGCT+TGG | 0.513992 | tig0030427:-13026 | Msa1443340:CDS |
| GACTTCTTTGATCCACTAAG+AGG | 0.514107 | tig0030427:-21344 | Msa1443340:CDS |
| CATTGATCAGCTCCCAATCA+TGG | 0.516367 | tig0030427:-6627 | Msa1443340:intron |
| GAAATCTTAGATGTAATGCA+TGG | 0.516455 | tig0030427:-10550 | Msa1443340:CDS |
| AAAGAAAACTGACCATGATT+GGG | 0.517615 | tig0030427:+6615 | None:intergenic |
| AGTATCTCGCTTTGTGCACA+TGG | 0.517662 | tig0030427:-10155 | Msa1443340:intron |
| TTAACGTTGTTGTCGATGAT+GGG | 0.518430 | tig0030427:-21373 | Msa1443340:CDS |
| TGTGTTAGATAAAGTTATGC+AGG | 0.525356 | tig0030427:-12675 | Msa1443340:intron |
| ATATAAGTTATTAGGGAAGT+AGG | 0.529644 | tig0030427:+6651 | None:intergenic |
| ATAGCAAGTTTCTTTGGCAT+CGG | 0.530542 | tig0030427:+15046 | None:intergenic |
| TGGCTGTTCCAATCAGTGTA+AGG | 0.531637 | tig0030427:+4956 | None:intergenic |
| TGGAACTTTACTCTGCAACT+TGG | 0.534295 | tig0030427:-17029 | Msa1443340:CDS |
| TAGTATAACATGTCATTGCC+TGG | 0.536656 | tig0030427:+5752 | None:intergenic |
| GTTGGAGACTGTCTGTAGGC+TGG | 0.537931 | tig0030427:+13951 | None:intergenic |
| AAAATTGCAAATCAGCCTGA+TGG | 0.537953 | tig0030427:-13550 | Msa1443340:CDS |
| CGGCAATATGCAGATGCCAC+TGG | 0.538008 | tig0030427:+13896 | None:intergenic |
| GAGGTCCACTCCTTCATTGG+TGG | 0.538396 | tig0030427:+21254 | None:intergenic |
| AAAATACCTATGTCATGTGA+TGG | 0.538842 | tig0030427:+13842 | None:intergenic |
| GTACCCTAGTTACTTGGAGA+TGG | 0.539367 | tig0030427:-14005 | Msa1443340:intron |
| ATAATTTCACTAAGATTACA+AGG | 0.539570 | tig0030427:+4637 | None:intergenic |
| TACAGACAGTCTCCAACGCT+TGG | 0.539598 | tig0030427:-13945 | Msa1443340:CDS |
| GGTAGATTATGGAACGGAGA+TGG | 0.542644 | tig0030427:-10046 | Msa1443340:CDS |
| ACACTTCATAATATACTCAA+TGG | 0.543491 | tig0030427:+13521 | None:intergenic |
| AGGAATTAATAATGATGCAA+AGG | 0.544220 | tig0030427:-21321 | Msa1443340:CDS |
| AGGGTGTCAAGGTGATTACT+TGG | 0.545052 | tig0030427:-18558 | Msa1443340:CDS |
| TTACAAGTTGAATGGTTGAC+TGG | 0.549747 | tig0030427:+4902 | None:intergenic |
| TGAATCTACCAAAATTTGCT+CGG | 0.550291 | tig0030427:+9995 | None:intergenic |
| TCAGAGCGTGCTTCGAACGG+AGG | 0.551881 | tig0030427:-10793 | Msa1443340:CDS |
| TTCAGCGATGAGAAGAAAGC+TGG | 0.552882 | tig0030427:+22391 | None:intergenic |
| ACTAGCCCTTCAACATCAGT+TGG | 0.557730 | tig0030427:+6922 | None:intergenic |
| GTCATCAGCAAGCCAAGACC+GGG | 0.560886 | tig0030427:+18492 | None:intergenic |
| TTGGGTTCAGGCTGTATGAA+GGG | 0.561389 | tig0030427:-12724 | Msa1443340:CDS |
| TACTCATCAAGACTCTCGTA+CGG | 0.563752 | tig0030427:+11363 | None:intergenic |
| TTTCAGGTTGCATTCTTAGG+GGG | 0.564146 | tig0030427:-9266 | Msa1443340:intron |
| AGGAGAGAGGGGATGAGCAT+CGG | 0.564253 | tig0030427:+22289 | None:intergenic |
| ATTATGAAGTGTATATTTAG+CGG | 0.564480 | tig0030427:-13510 | Msa1443340:CDS |
| ATTTCAGAGCGTGCTTCGAA+CGG | 0.567971 | tig0030427:-10796 | Msa1443340:CDS |
| TTGGGCACTCAAACATGACT+TGG | 0.568509 | tig0030427:+4936 | None:intergenic |
| GCAAATGCAAACCTGATGAA+AGG | 0.570852 | tig0030427:+12860 | None:intergenic |
| TTCAAGTTGACAGGTTCTGG+AGG | 0.571677 | tig0030427:+21293 | None:intergenic |
| TCAGGAATTGGCTGTTTGCA+TGG | 0.574052 | tig0030427:-9212 | Msa1443340:intron |
| GTCTTCAACAAGTATGCACC+TGG | 0.578523 | tig0030427:-18614 | Msa1443340:CDS |
| AAATCTTAGATGTAATGCAT+GGG | 0.583220 | tig0030427:-10549 | Msa1443340:CDS |
| TTCTTTGATCCACTAAGAGG+AGG | 0.591223 | tig0030427:-21341 | Msa1443340:CDS |
| ATTTGCAGATGAGGGTGTCA+AGG | 0.591813 | tig0030427:-18569 | Msa1443340:CDS |
| GAACTCCAACTGATGTTGAA+GGG | 0.594167 | tig0030427:-6927 | Msa1443340:CDS |
| CACAATGAGCCATATATAGA+CGG | 0.595405 | tig0030427:+13876 | None:intergenic |
| TCATCTCATTGAATTTAACA+AGG | 0.595878 | tig0030427:-12889 | Msa1443340:CDS |
| CAGCATTGACAATGTTAACC+GGG | 0.596358 | tig0030427:+12696 | None:intergenic |
| TGAGCATCGGCGCGTAGACG+AGG | 0.597225 | tig0030427:+22302 | None:intergenic |
| TCAGGAGACTACTAATGCAG+AGG | 0.597466 | tig0030427:-21229 | Msa1443340:CDS |
| ACCTGTGGGAGGAGTGAAGG+TGG | 0.599995 | tig0030427:+22266 | None:intergenic |
| GCTGTATGAAGGGAAATGCC+CGG | 0.600517 | tig0030427:-12714 | Msa1443340:CDS |
| CGCTTGGTGATGATGACAAG+AGG | 0.600991 | tig0030427:-13929 | Msa1443340:CDS |
| AAGCTTCCATCACATGACAT+AGG | 0.603180 | tig0030427:-13848 | Msa1443340:intron |
| CAAGTTGAATGGTTGACTGG+AGG | 0.604538 | tig0030427:+4905 | None:intergenic |
| TTGTCATCATCACCAAGCGT+TGG | 0.606364 | tig0030427:+13933 | None:intergenic |
| CTGAGAAGGTTCTTCCTGAA+CGG | 0.607804 | tig0030427:+5661 | None:intergenic |
| TGAACCTGTGGGAGGAGTGA+AGG | 0.610246 | tig0030427:+22263 | None:intergenic |
| ACTCATCAAGACTCTCGTAC+GGG | 0.612958 | tig0030427:+11364 | None:intergenic |
| TTACGAATAAGGATGATGAT+GGG | 0.616266 | tig0030427:-10192 | Msa1443340:CDS |
| TGTGACAAGGACAAATAGAG+TGG | 0.616862 | tig0030427:+17120 | None:intergenic |
| TCAAGTTGACAGGTTCTGGA+GGG | 0.616999 | tig0030427:+21294 | None:intergenic |
| TGTGGGAGGAGTGAAGGTGG+AGG | 0.618202 | tig0030427:+22269 | None:intergenic |
| GCTAAATTGAAGGCTGCTCG+AGG | 0.618534 | tig0030427:-5567 | Msa1443340:intron |
| AGATATCATGGACATGATTG+GGG | 0.619973 | tig0030427:-17098 | Msa1443340:CDS |
| TTTCCCTTAATAAATAAAAG+GGG | 0.620483 | tig0030427:+4733 | None:intergenic |
| TAAGGATGATGATGGGCAAG+TGG | 0.624712 | tig0030427:-10185 | Msa1443340:CDS |
| TCGTGATTACCAAACTGAGA+AGG | 0.626227 | tig0030427:-22339 | Msa1443340:CDS |
| AATCAGTGTAAGGCAAGTAG+AGG | 0.627995 | tig0030427:+4966 | None:intergenic |
| CATAAGCATCTACGACACTC+AGG | 0.631788 | tig0030427:+11340 | None:intergenic |
| GTGATCCACCAATGAAGGAG+TGG | 0.633179 | tig0030427:-21259 | Msa1443340:CDS |
| TCGAGCAGAAAACGCCAGCA+AGG | 0.636954 | tig0030427:+13974 | None:intergenic |
| CAATGACATGTTATACTATG+GGG | 0.639140 | tig0030427:-5747 | Msa1443340:CDS |
| GGAGAAGGAACTCACATGCG+TGG | 0.643037 | tig0030427:+14984 | None:intergenic |
| AGCTCAAAGATGAAATTACC+CGG | 0.646652 | tig0030427:-18510 | Msa1443340:CDS |
| CATACTGGAGATACCTGAGA+AGG | 0.648838 | tig0030427:+5647 | None:intergenic |
| TCTTAGTGGATCAAAGAAGT+CGG | 0.649749 | tig0030427:+21346 | None:intergenic |
| GCCATATCATGCAAATACAC+AGG | 0.650728 | tig0030427:-6435 | Msa1443340:intron |
| GTGACAAGGACAAATAGAGT+GGG | 0.650949 | tig0030427:+17121 | None:intergenic |
| AAGCGTTGGAGACTGTCTGT+AGG | 0.656409 | tig0030427:+13947 | None:intergenic |
| GACTTCGCTAAATGTGACAC+AGG | 0.664810 | tig0030427:+9422 | None:intergenic |
| TTGCTAGGTAGATTATGGAA+CGG | 0.665043 | tig0030427:-10052 | Msa1443340:intron |
| AAGAGGATTAGGAGATCCAG+TGG | 0.669624 | tig0030427:-13912 | Msa1443340:CDS |
| TTGCGATATGAACCTGTGGG+AGG | 0.675063 | tig0030427:+22255 | None:intergenic |
| TGTCCATGATATCTGTGACA+AGG | 0.676504 | tig0030427:+17107 | None:intergenic |
| TTCAACAAGTATGCACCTGG+AGG | 0.708301 | tig0030427:-18611 | Msa1443340:CDS |
| ATAACTTTAAGGATGTTACA+CGG | 0.747631 | tig0030427:+18470 | None:intergenic |
| TAGTAAGATAGAATACAACA+AGG | 0.751207 | tig0030427:+4801 | None:intergenic |
| ACATCCTTAATATGGCGACG+AGG | 0.792285 | tig0030427:-10501 | Msa1443340:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATAAATTCTGTAAAATT+TGG | - | tig0030427:4837-4856 | Msa1443340:exon | 10.0% |
| !! | TATAAATAAATGTTAGTATT+TGG | - | tig0030427:5880-5899 | Msa1443340:intron | 10.0% |
| !! | ATAAATAAATGTTAGTATTT+GGG | - | tig0030427:5881-5900 | Msa1443340:intron | 10.0% |
| !! | ATTATTGAATATTATTATGA+AGG | - | tig0030427:8029-8048 | Msa1443340:intron | 10.0% |
| !! | TTATTGAATATTATTATGAA+GGG | - | tig0030427:8030-8049 | Msa1443340:intron | 10.0% |
| !! | TAAATTATTAAATACATCAA+AGG | + | tig0030427:8562-8581 | None:intergenic | 10.0% |
| !! | CTTATTATTAATTAAAAGTT+AGG | + | tig0030427:10207-10226 | None:intergenic | 10.0% |
| !!! | CTAACTTTTAATTAATAATA+AGG | - | tig0030427:10205-10224 | Msa1443340:CDS | 10.0% |
| !! | AAATATTTATCTGTAAAATT+AGG | - | tig0030427:10623-10642 | Msa1443340:intron | 10.0% |
| !! | TTGTCAAAAAAATAAAATAA+TGG | + | tig0030427:11372-11391 | None:intergenic | 10.0% |
| !!! | GAATTTTTAATTTTTTTTTG+TGG | - | tig0030427:12143-12162 | Msa1443340:intron | 10.0% |
| !! | GTATATTAAAAATTAAAATC+AGG | + | tig0030427:15347-15366 | None:intergenic | 10.0% |
| !! | TTTATTGAGTTTATATAAAT+AGG | + | tig0030427:18798-18817 | None:intergenic | 10.0% |
| !! | ATTAAAAAAAAAAACTATCA+AGG | - | tig0030427:18827-18846 | Msa1443340:intron | 10.0% |
| !! | TAAATAAATGTTAGTATTTG+GGG | - | tig0030427:5882-5901 | Msa1443340:intron | 15.0% |
| !!! | TATATTTTGTAGGATTATTT+TGG | - | tig0030427:6483-6502 | Msa1443340:CDS | 15.0% |
| !!! | ATATTTTGTAGGATTATTTT+GGG | - | tig0030427:6484-6503 | Msa1443340:CDS | 15.0% |
| !!! | ATGTACAAAACTTTAAAAAA+GGG | + | tig0030427:7948-7967 | None:intergenic | 15.0% |
| !!! | AAATTTGTTTTAGAATACAA+CGG | + | tig0030427:8158-8177 | None:intergenic | 15.0% |
| !! | AAAATCAATGTAAAAGATAT+TGG | + | tig0030427:8292-8311 | None:intergenic | 15.0% |
| !! | AACTAAATGACATTAAATAA+AGG | + | tig0030427:8326-8345 | None:intergenic | 15.0% |
| !!! | AAAAATATATTCTAGCTAAA+TGG | + | tig0030427:8675-8694 | None:intergenic | 15.0% |
| !!! | TATTTTTGATTAAATAGAAG+TGG | - | tig0030427:9677-9696 | Msa1443340:intron | 15.0% |
| !!! | TTTAAGTTTAAATTTTGTAC+CGG | - | tig0030427:10247-10266 | Msa1443340:CDS | 15.0% |
| !! | TTGAAACTAAAAAAACAAAA+AGG | + | tig0030427:10279-10298 | None:intergenic | 15.0% |
| !!! | TTGTTTTTTTAGTTTCAAAT+TGG | - | tig0030427:10281-10300 | Msa1443340:intron | 15.0% |
| !!! | ATTTCTTTATTTAAGTGAAA+TGG | - | tig0030427:11316-11335 | Msa1443340:CDS | 15.0% |
| !!! | TTTCTTTATTTAAGTGAAAT+GGG | - | tig0030427:11317-11336 | Msa1443340:CDS | 15.0% |
| !! | TGTTATATAAAAACAATTTG+TGG | - | tig0030427:12321-12340 | Msa1443340:intron | 15.0% |
| !! | GTTATATAAAAACAATTTGT+GGG | - | tig0030427:12322-12341 | Msa1443340:intron | 15.0% |
| !!! | TATTTCCACATATTTTAAAA+GGG | + | tig0030427:13232-13251 | None:intergenic | 15.0% |
| !!! | TTATTTCCACATATTTTAAA+AGG | + | tig0030427:13233-13252 | None:intergenic | 15.0% |
| !! | AAAAAAAAACAAAGATGTAT+GGG | + | tig0030427:13604-13623 | None:intergenic | 15.0% |
| !! | AAAAAAAAAACAAAGATGTA+TGG | + | tig0030427:13605-13624 | None:intergenic | 15.0% |
| !! | TTCATATAACAAAGATATAT+GGG | + | tig0030427:13646-13665 | None:intergenic | 15.0% |
| !!! | TCAATCAATTTTATTGTTTT+AGG | - | tig0030427:14703-14722 | Msa1443340:intron | 15.0% |
| !! | AAGAAAAAAAAAATAGAAAG+AGG | - | tig0030427:14728-14747 | Msa1443340:intron | 15.0% |
| !! | TTTACTACATATTAAGTTAA+AGG | - | tig0030427:15063-15082 | Msa1443340:CDS | 15.0% |
| !!! | TATTTTTAGTGATTTTATTC+TGG | - | tig0030427:15515-15534 | Msa1443340:intron | 15.0% |
| !!! | ATTTTTAGTGATTTTATTCT+GGG | - | tig0030427:15516-15535 | Msa1443340:intron | 15.0% |
| !! | ATTTGATATATTCTCTAATT+TGG | - | tig0030427:15587-15606 | Msa1443340:intron | 15.0% |
| !!! | TTTTATATTGTGTGAATAAA+AGG | - | tig0030427:15740-15759 | Msa1443340:intron | 15.0% |
| !! | TTTATATTGTGTGAATAAAA+GGG | - | tig0030427:15741-15760 | Msa1443340:intron | 15.0% |
| !!! | ATTACCTTTTTTTATTTATG+TGG | - | tig0030427:15856-15875 | Msa1443340:intron | 15.0% |
| !!! | AGATAAATCTCAATATTTTA+TGG | + | tig0030427:16016-16035 | None:intergenic | 15.0% |
| !! | TAAATTCCTTGAAAAAAATT+CGG | - | tig0030427:17326-17345 | Msa1443340:intron | 15.0% |
| !! | ATTTATTAAGTCGTATATAT+AGG | + | tig0030427:18476-18495 | None:intergenic | 15.0% |
| !! | AAACATTATTTCAAATTGAA+AGG | + | tig0030427:19371-19390 | None:intergenic | 15.0% |
| !! | CATATATTAAATATAACAAG+AGG | + | tig0030427:19726-19745 | None:intergenic | 15.0% |
| !! | TCAATGTATATAAGTTATTA+GGG | + | tig0030427:20353-20372 | None:intergenic | 15.0% |
| !! | ATCAATGTATATAAGTTATT+AGG | + | tig0030427:20354-20373 | None:intergenic | 15.0% |
| !! | TATTGAAATGTAAAGAAATA+TGG | - | tig0030427:20969-20988 | Msa1443340:intron | 15.0% |
| !! | TAAATTACTTTATTCAAACA+AGG | + | tig0030427:21132-21151 | None:intergenic | 15.0% |
| !!! | ACAATAAATTTTGTAAATGA+AGG | + | tig0030427:21159-21178 | None:intergenic | 15.0% |
| !! | TGAATACTAAATTTCATTGA+TGG | - | tig0030427:4622-4641 | Msa1443340:three_prime_UTR | 20.0% |
| !! | TTTATGACTTATTGATATCT+CGG | - | tig0030427:5416-5435 | Msa1443340:intron | 20.0% |
| !!! | ATCAAATATTTTTAAGGAAG+AGG | - | tig0030427:6204-6223 | Msa1443340:intron | 20.0% |
| !! | ATTTGAACTTAGTTAGAAAT+TGG | - | tig0030427:6400-6419 | Msa1443340:intron | 20.0% |
| !!! | TCTAAAAAAGTGTCATAATT+GGG | - | tig0030427:6580-6599 | Msa1443340:intron | 20.0% |
| !! | ATTTGAACTTAGTTAGAAAT+TGG | - | tig0030427:6400-6419 | Msa1443340:intron | 20.0% |
| !!! | ATCAAATATTTTTAAGGAAG+AGG | - | tig0030427:6204-6223 | Msa1443340:intron | 20.0% |
| !!! | TGTACAAAACTTTAAAAAAG+GGG | + | tig0030427:7947-7966 | None:intergenic | 20.0% |
| !!! | CATGTACAAAACTTTAAAAA+AGG | + | tig0030427:7949-7968 | None:intergenic | 20.0% |
| !! | CTAATCTATAAGAATATCAA+AGG | + | tig0030427:8101-8120 | None:intergenic | 20.0% |
| !! | TTAATTAAAGTAGAAACTGA+AGG | + | tig0030427:8199-8218 | None:intergenic | 20.0% |
| !! | ATCCTTAAAGTTATCTATAA+AGG | - | tig0030427:8533-8552 | Msa1443340:intron | 20.0% |
| !! | GTGATTTCAAAAAACAAAAA+AGG | + | tig0030427:8618-8637 | None:intergenic | 20.0% |
| !!! | CATTTAATTTATTAACTCGA+AGG | - | tig0030427:8707-8726 | Msa1443340:intron | 20.0% |
| !! | TTAGTAAAATGCCATATAAA+AGG | + | tig0030427:8763-8782 | None:intergenic | 20.0% |
| !! | ATAAATAGTGCTTATGAATA+AGG | - | tig0030427:8881-8900 | Msa1443340:intron | 20.0% |
| !! | CATGAGTTTATTCATAATAT+GGG | + | tig0030427:9165-9184 | None:intergenic | 20.0% |
| !! | TCATGAGTTTATTCATAATA+TGG | + | tig0030427:9166-9185 | None:intergenic | 20.0% |
| !! | GAAAATGATTATTTATTTGC+AGG | - | tig0030427:9809-9828 | Msa1443340:intron | 20.0% |
| !!! | ATTTTATGACTAAAAGGAAT+AGG | + | tig0030427:10332-10351 | None:intergenic | 20.0% |
| !!! | GCATATATTTTATGACTAAA+AGG | + | tig0030427:10338-10357 | None:intergenic | 20.0% |
| !! | TATTTCATCAACAAAGTAAT+CGG | + | tig0030427:10492-10511 | None:intergenic | 20.0% |
| !! | TATTTCATCAACAAAGTAAT+CGG | + | tig0030427:10492-10511 | None:intergenic | 20.0% |
| !! | TGTAAAATTAGGATTGAATT+GGG | - | tig0030427:10634-10653 | Msa1443340:intron | 20.0% |
| !! | AAATGTATGTAAGTTATGTT+TGG | - | tig0030427:10671-10690 | Msa1443340:intron | 20.0% |
| !! | ACAATTTGATACAACAAAAA+AGG | - | tig0030427:10778-10797 | Msa1443340:CDS | 20.0% |
| !!! | GAGTTTTTTTAGTTTCAAAT+TGG | + | tig0030427:10836-10855 | None:intergenic | 20.0% |
| !! | TTGAAACTAAAAAAACTCAA+AGG | - | tig0030427:10838-10857 | Msa1443340:intron | 20.0% |
| !! | TCTGGATATACATTATTATT+AGG | + | tig0030427:10913-10932 | None:intergenic | 20.0% |
| !! | ATTGTTAATACCTATAAATG+CGG | - | tig0030427:11214-11233 | Msa1443340:intron | 20.0% |
| !!! | AAAAGTTTAAGTTGTATTCA+TGG | - | tig0030427:11264-11283 | Msa1443340:intron | 20.0% |
| !! | TACCAAAAATACAAATACAT+TGG | - | tig0030427:11596-11615 | Msa1443340:intron | 20.0% |
| !!! | TACCAATGTATTTGTATTTT+TGG | + | tig0030427:11601-11620 | None:intergenic | 20.0% |
| !! | ACAACAATAAGTTAAATAGA+GGG | + | tig0030427:12038-12057 | None:intergenic | 20.0% |
| !! | TACAACAATAAGTTAAATAG+AGG | + | tig0030427:12039-12058 | None:intergenic | 20.0% |
| !!! | TTTTTATATAACACAAAGCT+GGG | + | tig0030427:12314-12333 | None:intergenic | 20.0% |
| !!! | TCTAAAAAAGTGTCATAATT+GGG | - | tig0030427:6580-6599 | Msa1443340:intron | 20.0% |
| !!! | AATTAACTTCAAACATGTTT+TGG | - | tig0030427:12759-12778 | Msa1443340:intron | 20.0% |
| !! | TGTCAATATTGCTTAAAATT+TGG | - | tig0030427:12840-12859 | Msa1443340:intron | 20.0% |
| !!! | AGAGTTTGTTAAAAATCATT+TGG | - | tig0030427:12898-12917 | Msa1443340:CDS | 20.0% |
| !!! | GAGTTTGTTAAAAATCATTT+GGG | - | tig0030427:12899-12918 | Msa1443340:CDS | 20.0% |
| !! | ATTATGAAGTGTATATTTAG+CGG | - | tig0030427:13484-13503 | Msa1443340:intron | 20.0% |
| !! | AAAAAAAACAAAGATGTATG+GGG | + | tig0030427:13603-13622 | None:intergenic | 20.0% |
| !! | CTTCATATAACAAAGATATA+TGG | + | tig0030427:13647-13666 | None:intergenic | 20.0% |
| !!! | TAAAAGTGCATATTAGAATA+TGG | + | tig0030427:14210-14229 | None:intergenic | 20.0% |
| !! | ACTTTCTAACAATATATTTC+TGG | - | tig0030427:14377-14396 | Msa1443340:intron | 20.0% |
| !!! | TTATTTTTCGTTAGAATGTA+AGG | - | tig0030427:14553-14572 | Msa1443340:intron | 20.0% |
| !!! | TTTTTTTTTGTTCTTCTAAG+AGG | - | tig0030427:14634-14653 | Msa1443340:intron | 20.0% |
| !!! | TATTTCACTAGTTATTTTTC+AGG | + | tig0030427:14944-14963 | None:intergenic | 20.0% |
| !!! | CAATTATGACACAATTTTAT+GGG | + | tig0030427:15204-15223 | None:intergenic | 20.0% |
| !! | CATAAAATTGTGTCATAATT+GGG | - | tig0030427:15203-15222 | Msa1443340:intron | 20.0% |
| !! | ATAAAATTGTGTCATAATTG+GGG | - | tig0030427:15204-15223 | Msa1443340:intron | 20.0% |
| !! | TCTGAACAAATTCTTTATTA+TGG | + | tig0030427:15453-15472 | None:intergenic | 20.0% |
| !! | CTCAACAAAAAAGATAAAAA+TGG | + | tig0030427:15775-15794 | None:intergenic | 20.0% |
| !!! | CTATATCTTGTTACTTTTTT+GGG | + | tig0030427:15947-15966 | None:intergenic | 20.0% |
| !!! | TCTATATCTTGTTACTTTTT+TGG | + | tig0030427:15948-15967 | None:intergenic | 20.0% |
| !! | GATTAATTATTATCCAGTTT+AGG | - | tig0030427:16047-16066 | Msa1443340:intron | 20.0% |
| !! | ATATATGTACTAGAAAATCA+AGG | + | tig0030427:16585-16604 | None:intergenic | 20.0% |
| !!! | TATATGATACACGTATTTTA+AGG | - | tig0030427:16675-16694 | Msa1443340:intron | 20.0% |
| !! | TAATATGGAATTTACGAATA+AGG | - | tig0030427:16791-16810 | Msa1443340:intron | 20.0% |
| !! | GAATTTAATGAAATTGGAAT+GGG | + | tig0030427:17313-17332 | None:intergenic | 20.0% |
| !! | TTCAAGGAATTTAATGAAAT+TGG | + | tig0030427:17319-17338 | None:intergenic | 20.0% |
| !!! | AAAAATTGTTTGTAGAGTTT+TGG | - | tig0030427:17389-17408 | Msa1443340:intron | 20.0% |
| !!! | TATATCACTAACTATTTTAC+CGG | + | tig0030427:17454-17473 | None:intergenic | 20.0% |
| !!! | GATTTATAGTTTGAATTTTC+AGG | - | tig0030427:17712-17731 | Msa1443340:intron | 20.0% |
| !!! | TAGTATTCATTTTCAAACAT+TGG | + | tig0030427:17865-17884 | None:intergenic | 20.0% |
| !! | TTCAATGCTAAATTCTTATA+TGG | - | tig0030427:17921-17940 | Msa1443340:intron | 20.0% |
| !!! | TTTTTTTTTTCTTTCTACCT+AGG | - | tig0030427:18340-18359 | Msa1443340:intron | 20.0% |
| !! | ATTATTAGATAACAGACATA+GGG | + | tig0030427:18432-18451 | None:intergenic | 20.0% |
| !! | AATTATTAGATAACAGACAT+AGG | + | tig0030427:18433-18452 | None:intergenic | 20.0% |
| !! | CTGTTATCTAATAATTTGAA+AGG | - | tig0030427:18437-18456 | Msa1443340:intron | 20.0% |
| !! | AAATCATTAGATAATAGACT+AGG | + | tig0030427:18519-18538 | None:intergenic | 20.0% |
| !! | CTATTATCTAATGATTTGAA+AGG | - | tig0030427:18522-18541 | Msa1443340:CDS | 20.0% |
| !! | TAGAATCTAAGTCTTTAATA+GGG | + | tig0030427:18767-18786 | None:intergenic | 20.0% |
| !! | ATAGAATCTAAGTCTTTAAT+AGG | + | tig0030427:18768-18787 | None:intergenic | 20.0% |
| !! | ATAGGAGTTATACAAATATA+AGG | + | tig0030427:18945-18964 | None:intergenic | 20.0% |
| !! | AATGTATGCATAAAATCTTT+AGG | + | tig0030427:19345-19364 | None:intergenic | 20.0% |
| !! | AAACAACAATTAACTATTTC+TGG | + | tig0030427:20026-20045 | None:intergenic | 20.0% |
| !! | AGTTGAAATAATATTAACCT+GGG | + | tig0030427:20137-20156 | None:intergenic | 20.0% |
| !! | AAGTTGAAATAATATTAACC+TGG | + | tig0030427:20138-20157 | None:intergenic | 20.0% |
| !!! | ACTTAAAAACCTCTTTTTTA+AGG | - | tig0030427:20178-20197 | Msa1443340:intron | 20.0% |
| !!! | CTTAAAAACCTCTTTTTTAA+GGG | - | tig0030427:20179-20198 | Msa1443340:intron | 20.0% |
| !! | TCTATTACAGATTATAATAG+TGG | + | tig0030427:20211-20230 | None:intergenic | 20.0% |
| !!! | AATGTTTGTTTTGTTCATTT+TGG | + | tig0030427:20630-20649 | None:intergenic | 20.0% |
| !! | TATCGTATTTAGTAGAAATA+GGG | + | tig0030427:20911-20930 | None:intergenic | 20.0% |
| !! | ATATCGTATTTAGTAGAAAT+AGG | + | tig0030427:20912-20931 | None:intergenic | 20.0% |
| !! | TTTCTACTAAATACGATATA+TGG | - | tig0030427:20913-20932 | Msa1443340:intron | 20.0% |
| !! | GATTTATTATGCTAAATTGA+AGG | - | tig0030427:21417-21436 | Msa1443340:intron | 20.0% |
| !!! | AATCTTATTTATTAGTGATG+TGG | - | tig0030427:21549-21568 | Msa1443340:intron | 20.0% |
| !!! | ATCTTATTTATTAGTGATGT+GGG | - | tig0030427:21550-21569 | Msa1443340:intron | 20.0% |
| !! | TTTCCCTTAATAAATAAAAG+GGG | + | tig0030427:22264-22283 | None:intergenic | 20.0% |
| !! | CTTTCCCTTAATAAATAAAA+GGG | + | tig0030427:22265-22284 | None:intergenic | 20.0% |
| !! | TCTTTCCCTTAATAAATAAA+AGG | + | tig0030427:22266-22285 | None:intergenic | 20.0% |
| !! | ATAATTTCACTAAGATTACA+AGG | + | tig0030427:22360-22379 | None:intergenic | 20.0% |
| !! | CTAAATTCATGTTACAATAT+AGG | + | tig0030427:22404-22423 | None:intergenic | 20.0% |
| !!! | TTGTAACATGAATTTAGTTT+TGG | - | tig0030427:22407-22426 | Msa1443340:five_prime_UTR | 20.0% |
| ! | TTATGACTTATTGATATCTC+GGG | - | tig0030427:5417-5436 | Msa1443340:intron | 25.0% |
| ! | AAAATTTATGTAGAACAGCT+TGG | - | tig0030427:5481-5500 | Msa1443340:intron | 25.0% |
| !!! | TTGGTGTTGTGATTTTTTTT+AGG | - | tig0030427:5500-5519 | Msa1443340:intron | 25.0% |
| ! | AGGAATTAATAATGATGCAA+AGG | - | tig0030427:5673-5692 | Msa1443340:CDS | 25.0% |
| ! | ATTCTACACAAACTAGAAAA+AGG | + | tig0030427:5842-5861 | None:intergenic | 25.0% |
| ! | TTTGTGTAGAATATCAAAGA+AGG | - | tig0030427:5850-5869 | Msa1443340:intron | 25.0% |
| ! | TGAGAAAAATACTGTTTCAT+TGG | - | tig0030427:6160-6179 | Msa1443340:intron | 25.0% |
| ! | TTTACAAGTCTACTAATGAT+AGG | + | tig0030427:6234-6253 | None:intergenic | 25.0% |
| ! | AAATTCAAAAACACCTCTAA+GGG | + | tig0030427:6314-6333 | None:intergenic | 25.0% |
| ! | AGCTATTTATCTGAAAAACA+TGG | - | tig0030427:6356-6375 | Msa1443340:intron | 25.0% |
| ! | AACTTTGATACGAAAAAGTT+TGG | - | tig0030427:6454-6473 | Msa1443340:CDS | 25.0% |
| ! | ACTTTGATACGAAAAAGTTT+GGG | - | tig0030427:6455-6474 | Msa1443340:CDS | 25.0% |
| !!! | CTCTAAAAAAGTGTCATAAT+TGG | - | tig0030427:6579-6598 | Msa1443340:intron | 25.0% |
| ! | AAATCTAAGTCTCTAGTATA+GGG | + | tig0030427:6862-6881 | None:intergenic | 25.0% |
| ! | AAAATCTAAGTCTCTAGTAT+AGG | + | tig0030427:6863-6882 | None:intergenic | 25.0% |
| ! | AACTTTGATACGAAAAAGTT+TGG | - | tig0030427:6454-6473 | Msa1443340:CDS | 25.0% |
| ! | ACTTTGATACGAAAAAGTTT+GGG | - | tig0030427:6455-6474 | Msa1443340:CDS | 25.0% |
| ! | TGAGAAAAATACTGTTTCAT+TGG | - | tig0030427:6160-6179 | Msa1443340:intron | 25.0% |
| ! | AAATTCAAAAACACCTCTAA+GGG | + | tig0030427:6314-6333 | None:intergenic | 25.0% |
| !!! | TTTAAAGTTTTGTACATGCT+AGG | - | tig0030427:7951-7970 | Msa1443340:intron | 25.0% |
| ! | AACTGAAGGATTATAGATAA+AGG | + | tig0030427:8185-8204 | None:intergenic | 25.0% |
| ! | TGTAAAAGATATTGGCAATA+TGG | + | tig0030427:8284-8303 | None:intergenic | 25.0% |
| !! | ATAACTTTAAGGATGTTACA+CGG | + | tig0030427:8527-8546 | None:intergenic | 25.0% |
| ! | CACCTTTATAGATAACTTTA+AGG | + | tig0030427:8538-8557 | None:intergenic | 25.0% |
| !! | TACTATTTGGTCCTTTTATA+TGG | - | tig0030427:8749-8768 | Msa1443340:intron | 25.0% |
| !! | CTTTTACTGTTAATAAGTGT+TGG | - | tig0030427:8829-8848 | Msa1443340:intron | 25.0% |
| ! | ATTTATGTCATATCTCTAGA+CGG | + | tig0030427:8867-8886 | None:intergenic | 25.0% |
| ! | CTACAAACTTTGTAAACTTT+AGG | + | tig0030427:9320-9339 | None:intergenic | 25.0% |
| ! | CTATTATACAACTGAAAACA+GGG | + | tig0030427:9345-9364 | None:intergenic | 25.0% |
| ! | TGAAATACAGAAAAACAAGA+TGG | + | tig0030427:9404-9423 | None:intergenic | 25.0% |
| ! | TCTCATGTTTCAGATAATAT+AGG | - | tig0030427:9540-9559 | Msa1443340:intron | 25.0% |
| ! | CTCATGTTTCAGATAATATA+GGG | - | tig0030427:9541-9560 | Msa1443340:intron | 25.0% |
| ! | AATTACATTACTACAAGCTA+TGG | + | tig0030427:10023-10042 | None:intergenic | 25.0% |
| ! | AAAAACAAAAAGGACTAATC+CGG | + | tig0030427:10269-10288 | None:intergenic | 25.0% |
| ! | TTTACGTGAATGTTTATTAC+CGG | - | tig0030427:10512-10531 | Msa1443340:CDS | 25.0% |
| ! | CTGTAAAATTAGGATTGAAT+TGG | - | tig0030427:10633-10652 | Msa1443340:intron | 25.0% |
| !!! | TAAGCACTTTTTAACAAAGT+TGG | - | tig0030427:10742-10761 | Msa1443340:CDS | 25.0% |
| ! | TAACAAAGTTGGATGAAAAA+AGG | - | tig0030427:10753-10772 | Msa1443340:CDS | 25.0% |
| ! | AACAAAGTTGGATGAAAAAA+GGG | - | tig0030427:10754-10773 | Msa1443340:CDS | 25.0% |
| !! | TTTAAGTTTAATGTTTGCAC+CGG | + | tig0030427:10870-10889 | None:intergenic | 25.0% |
| ! | TAAATATTAGAAATGCACTC+TGG | + | tig0030427:10931-10950 | None:intergenic | 25.0% |
| ! | GCTTGTAAACTTATTCATAT+AGG | - | tig0030427:11240-11259 | Msa1443340:intron | 25.0% |
| ! | TTCTTGTGTCTTAATGATAA+TGG | + | tig0030427:11406-11425 | None:intergenic | 25.0% |
| ! | TATCAGATACAAATGCTATT+AGG | - | tig0030427:11619-11638 | Msa1443340:intron | 25.0% |
| !!! | GTTTGGCATATTTCTTATTT+TGG | - | tig0030427:11714-11733 | Msa1443340:intron | 25.0% |
| ! | GAAGAAAATATATGTGAACA+TGG | + | tig0030427:12105-12124 | None:intergenic | 25.0% |
| ! | AAGAAGAATGGCTATTTATT+GGG | + | tig0030427:12280-12299 | None:intergenic | 25.0% |
| ! | AAAGAAGAATGGCTATTTAT+TGG | + | tig0030427:12281-12300 | None:intergenic | 25.0% |
| !! | GTTTTTATATAACACAAAGC+TGG | + | tig0030427:12315-12334 | None:intergenic | 25.0% |
| !!! | CTCTAAAAAAGTGTCATAAT+TGG | - | tig0030427:6579-6598 | Msa1443340:intron | 25.0% |
| ! | GTTTATCATGTCATATTATG+TGG | + | tig0030427:12679-12698 | None:intergenic | 25.0% |
| ! | TATACTGTATGTCAATTCTT+AGG | - | tig0030427:13179-13198 | Msa1443340:intron | 25.0% |
| ! | TTCATAATATACTCAATGGT+TGG | + | tig0030427:13472-13491 | None:intergenic | 25.0% |
| ! | ACACTTCATAATATACTCAA+TGG | + | tig0030427:13476-13495 | None:intergenic | 25.0% |
| ! | TTATGAAGTGTATATTTAGC+GGG | - | tig0030427:13485-13504 | Msa1443340:intron | 25.0% |
| ! | GTTTATATTAATGTGTTCAC+TGG | - | tig0030427:13529-13548 | Msa1443340:CDS | 25.0% |
| ! | GGTCTTACAAAAATATGTAT+GGG | + | tig0030427:13582-13601 | None:intergenic | 25.0% |
| ! | TATATGAAGCAAAACATCAT+TGG | - | tig0030427:13658-13677 | Msa1443340:intron | 25.0% |
| ! | CTTGTCGTAATTATATAGAA+TGG | - | tig0030427:13783-13802 | Msa1443340:intron | 25.0% |
| ! | TGAAAAGATATTGAAGAGTA+AGG | + | tig0030427:13825-13844 | None:intergenic | 25.0% |
| ! | TGTTAAATTCAATGAGATGA+AGG | + | tig0030427:14105-14124 | None:intergenic | 25.0% |
| ! | TCATCTCATTGAATTTAACA+AGG | - | tig0030427:14105-14124 | Msa1443340:intron | 25.0% |
| !! | TGCACTTTTAATGTTCTTTT+TGG | - | tig0030427:14220-14239 | Msa1443340:intron | 25.0% |
| !! | TCTTTATTTATCTACACCTT+TGG | - | tig0030427:14459-14478 | Msa1443340:intron | 25.0% |
| !! | CTTTATTTATCTACACCTTT+GGG | - | tig0030427:14460-14479 | Msa1443340:intron | 25.0% |
| ! | TTTATTTATCTACACCTTTG+GGG | - | tig0030427:14461-14480 | Msa1443340:intron | 25.0% |
| ! | TATATAGACCCAGATTATTA+AGG | - | tig0030427:15150-15169 | Msa1443340:intron | 25.0% |
| ! | ATATAGACCCAGATTATTAA+GGG | - | tig0030427:15151-15170 | Msa1443340:intron | 25.0% |
| !! | CCAATTATGACACAATTTTA+TGG | + | tig0030427:15205-15224 | None:intergenic | 25.0% |
| ! | CCATAAAATTGTGTCATAAT+TGG | - | tig0030427:15202-15221 | Msa1443340:intron | 25.0% |
| ! | TAAAATTGTGTCATAATTGG+GGG | - | tig0030427:15205-15224 | Msa1443340:intron | 25.0% |
| ! | GGTCAAAATTTAATTAGTCA+AGG | + | tig0030427:15302-15321 | None:intergenic | 25.0% |
| ! | GTTGAGTAAATATTAGAAAC+AGG | + | tig0030427:15323-15342 | None:intergenic | 25.0% |
| ! | TTCATGATATCAAATAAGAG+GGG | + | tig0030427:15376-15395 | None:intergenic | 25.0% |
| ! | CTTCATGATATCAAATAAGA+GGG | + | tig0030427:15377-15396 | None:intergenic | 25.0% |
| !! | CTCTTATTTGATATCATGAA+GGG | - | tig0030427:15376-15395 | Msa1443340:intron | 25.0% |
| ! | TAGAGAATATATCAAATACC+TGG | + | tig0030427:15584-15603 | None:intergenic | 25.0% |
| ! | TCTTATACTTCAGAATCAAA+TGG | - | tig0030427:15681-15700 | Msa1443340:intron | 25.0% |
| ! | ACAGCCACATAAATAAAAAA+AGG | + | tig0030427:15863-15882 | None:intergenic | 25.0% |
| ! | GGATAATAATTAATCCATCA+AGG | + | tig0030427:16042-16061 | None:intergenic | 25.0% |
| ! | ATAAGTTATTTGAGAGTGAA+AGG | + | tig0030427:16087-16106 | None:intergenic | 25.0% |
| ! | TTTCACTCTCAAATAACTTA+TGG | - | tig0030427:16086-16105 | Msa1443340:intron | 25.0% |
| ! | TTCACTCTCAAATAACTTAT+GGG | - | tig0030427:16087-16106 | Msa1443340:intron | 25.0% |
| ! | AAGATTACAAAAGAATGTTG+TGG | + | tig0030427:16121-16140 | None:intergenic | 25.0% |
| !!! | TCATAGATGAAAGTATTTAG+AGG | + | tig0030427:16145-16164 | None:intergenic | 25.0% |
| ! | TCTATGACAGAATAATCATT+TGG | - | tig0030427:16158-16177 | Msa1443340:intron | 25.0% |
| !! | AGTGTGCAAAAGTATATTAT+AGG | + | tig0030427:16322-16341 | None:intergenic | 25.0% |
| ! | AGGAAAATGATTCTACAAAA+TGG | + | tig0030427:16424-16443 | None:intergenic | 25.0% |
| ! | AAATCTTAGATGTAATGCAT+GGG | - | tig0030427:16445-16464 | Msa1443340:intron | 25.0% |
| !! | CTTTTTGTACATCCTTAATA+TGG | - | tig0030427:16485-16504 | Msa1443340:intron | 25.0% |
| !! | ATGAATTCCAACTTTTCATT+CGG | - | tig0030427:16634-16653 | Msa1443340:intron | 25.0% |
| !! | TGTATTATTATTTGTTGAGC+AGG | - | tig0030427:16703-16722 | Msa1443340:intron | 25.0% |
| !!! | TTTAATTTGCTAACGTTCTT+TGG | - | tig0030427:16868-16887 | Msa1443340:intron | 25.0% |
| ! | TTTCATGAAAACGTTACAAA+TGG | - | tig0030427:17077-17096 | Msa1443340:CDS | 25.0% |
| ! | GGAATTTAATGAAATTGGAA+TGG | + | tig0030427:17314-17333 | None:intergenic | 25.0% |
| !!! | TTTTGGAAGAAACTAATGTT+CGG | - | tig0030427:17406-17425 | Msa1443340:intron | 25.0% |
| !! | ATATCACTAACTATTTTACC+GGG | + | tig0030427:17453-17472 | None:intergenic | 25.0% |
| ! | ATATAATCATTCTTTCTTGC+AGG | - | tig0030427:17471-17490 | Msa1443340:intron | 25.0% |
| !! | TACTATTCATTTGTTTCTTG+TGG | - | tig0030427:17880-17899 | Msa1443340:intron | 25.0% |
| !!! | TGGTTTTTTAAATGACTAGA+TGG | - | tig0030427:17941-17960 | Msa1443340:intron | 25.0% |
| !!! | GGTTTTTTAAATGACTAGAT+GGG | - | tig0030427:17942-17961 | Msa1443340:intron | 25.0% |
| ! | AATATTAGAGAGAGAGAATT+AGG | - | tig0030427:17982-18001 | Msa1443340:intron | 25.0% |
| ! | ATATTAGAGAGAGAGAATTA+GGG | - | tig0030427:17983-18002 | Msa1443340:intron | 25.0% |
| !! | GTTTCTCTTATAGTTTTTCT+AGG | + | tig0030427:18143-18162 | None:intergenic | 25.0% |
| !! | TAATGAGTTGGAACAAAATA+TGG | - | tig0030427:18184-18203 | Msa1443340:intron | 25.0% |
| ! | TGGATTATGATAGAACATTA+TGG | - | tig0030427:18204-18223 | Msa1443340:intron | 25.0% |
| !!! | ATGTTTTAGATAATAGACCT+AGG | + | tig0030427:18360-18379 | None:intergenic | 25.0% |
| !! | TAGGTCTATTATCTAAAACA+TGG | - | tig0030427:18359-18378 | Msa1443340:intron | 25.0% |
| !! | AGGTCTATTATCTAAAACAT+GGG | - | tig0030427:18360-18379 | Msa1443340:intron | 25.0% |
| ! | AGCTGAAAACTCAATAAATT+GGG | - | tig0030427:18386-18405 | Msa1443340:intron | 25.0% |
| ! | AAATATAAGGACAGTTACTT+GGG | + | tig0030427:18932-18951 | None:intergenic | 25.0% |
| ! | AGCATGTATTCAAATCTTTA+CGG | + | tig0030427:19046-19065 | None:intergenic | 25.0% |
| !! | TGATAAGTCTAAAACAGAAA+GGG | + | tig0030427:19189-19208 | None:intergenic | 25.0% |
| !! | TTGATAAGTCTAAAACAGAA+AGG | + | tig0030427:19190-19209 | None:intergenic | 25.0% |
| !! | TCTAAATTGATTTCAATGGT+TGG | + | tig0030427:19303-19322 | None:intergenic | 25.0% |
| !! | AATCTTTAGGAAGCAATATA+GGG | + | tig0030427:19332-19351 | None:intergenic | 25.0% |
| !! | AAATCTTTAGGAAGCAATAT+AGG | + | tig0030427:19333-19352 | None:intergenic | 25.0% |
| ! | GAGGAATTGTTCATTTATTA+AGG | + | tig0030427:19707-19726 | None:intergenic | 25.0% |
| !! | ATTCTCCTATCTTTTCTTTT+GGG | - | tig0030427:19881-19900 | Msa1443340:intron | 25.0% |
| ! | AATAGAAATATCTGTGTACT+AGG | - | tig0030427:20225-20244 | Msa1443340:intron | 25.0% |
| ! | ATATAAGTTATTAGGGAAGT+AGG | + | tig0030427:20346-20365 | None:intergenic | 25.0% |
| !! | ATCTTGTTTGATGAATGAAT+TGG | - | tig0030427:20448-20467 | Msa1443340:intron | 25.0% |
| ! | TATAAATACAACATAAGGCA+AGG | + | tig0030427:20595-20614 | None:intergenic | 25.0% |
| ! | CTGTGTATAAATACAACATA+AGG | + | tig0030427:20600-20619 | None:intergenic | 25.0% |
| ! | CTTATGTTGTATTTATACAC+AGG | - | tig0030427:20598-20617 | Msa1443340:intron | 25.0% |
| ! | TGTGTTTATATAACTAACAC+AGG | + | tig0030427:20876-20895 | None:intergenic | 25.0% |
| ! | ATCGTATTTAGTAGAAATAG+GGG | + | tig0030427:20910-20929 | None:intergenic | 25.0% |
| ! | AGTCTTAATCCTACTAAATA+AGG | - | tig0030427:20939-20958 | Msa1443340:intron | 25.0% |
| ! | GAAATATGGAAACAAATCAT+AGG | - | tig0030427:20983-21002 | Msa1443340:intron | 25.0% |
| ! | AATTATTCTAAGCTTGTGTT+AGG | - | tig0030427:21025-21044 | Msa1443340:intron | 25.0% |
| !! | CAAGGAATTTTGCAAATTAA+TGG | + | tig0030427:21114-21133 | None:intergenic | 25.0% |
| !!! | CAATTTTAACTAAACCATAC+TGG | + | tig0030427:21365-21384 | None:intergenic | 25.0% |
| !! | TTGCATTTTATCATCTTTTC+TGG | - | tig0030427:21474-21493 | Msa1443340:intron | 25.0% |
| ! | GGTAAAATTAAGAAGCAAAA+AGG | - | tig0030427:21571-21590 | Msa1443340:intron | 25.0% |
| ! | AAAATTAAGAAGCAAAAAGG+AGG | - | tig0030427:21574-21593 | Msa1443340:intron | 25.0% |
| ! | CACTAAAGTACAATATTGAA+GGG | + | tig0030427:21661-21680 | None:intergenic | 25.0% |
| ! | TCACTAAAGTACAATATTGA+AGG | + | tig0030427:21662-21681 | None:intergenic | 25.0% |
| ! | AGGTAAAATACTCAAAAGTT+TGG | + | tig0030427:21692-21711 | None:intergenic | 25.0% |
| ! | TAACATAATCTAGTGAGATA+TGG | - | tig0030427:21838-21857 | Msa1443340:intron | 25.0% |
| !! | CATTCTTTTATAGCATAATC+CGG | - | tig0030427:21883-21902 | Msa1443340:intron | 25.0% |
| ! | AAATCATACAGAAGTTGAAA+TGG | + | tig0030427:22145-22164 | None:intergenic | 25.0% |
| ! | TAGTAAGATAGAATACAACA+AGG | + | tig0030427:22196-22215 | None:intergenic | 25.0% |
| !! | TTACTATGTTCTTTTCCAAT+GGG | - | tig0030427:22210-22229 | Msa1443340:intron | 25.0% |
| !!! | TCTTCCCCTTTTATTTATTA+AGG | - | tig0030427:22257-22276 | Msa1443340:intron | 25.0% |
| !!! | CTTCCCCTTTTATTTATTAA+GGG | - | tig0030427:22258-22277 | Msa1443340:intron | 25.0% |
| !! | GTTTTTAGAGGATTTTGGAA+GGG | - | tig0030427:4994-5013 | Msa1443340:intron | 30.0% |
| !!! | TTCGATCAGACCTTTTTTTT+CGG | - | tig0030427:5091-5110 | Msa1443340:intron | 30.0% |
| TACCAAGTTTCCGAAAAAAA+AGG | + | tig0030427:5104-5123 | None:intergenic | 30.0% | |
| TCATAAACTGTGTTTGCATA+GGG | + | tig0030427:5403-5422 | None:intergenic | 30.0% | |
| ! | CGTGATTATGTAGAATTTTG+AGG | - | tig0030427:5532-5551 | Msa1443340:CDS | 30.0% |
| TCTGTTGATATTCTCTGTTT+AGG | - | tig0030427:5598-5617 | Msa1443340:intron | 30.0% | |
| TTATTAATTCCTCCTCTTAG+TGG | + | tig0030427:5665-5684 | None:intergenic | 30.0% | |
| TAAATGTTAGTATTTGGGGA+TGG | - | tig0030427:5886-5905 | Msa1443340:intron | 30.0% | |
| TGAGGATAAATGGTAGTATT+TGG | - | tig0030427:5910-5929 | Msa1443340:intron | 30.0% | |
| GAGGATAAATGGTAGTATTT+GGG | - | tig0030427:5911-5930 | Msa1443340:intron | 30.0% | |
| AGGATAAATGGTAGTATTTG+GGG | - | tig0030427:5912-5931 | Msa1443340:intron | 30.0% | |
| AATGTAGTATTTGTCATGCA+AGG | - | tig0030427:5948-5967 | Msa1443340:intron | 30.0% | |
| ATGTAGTATTTGTCATGCAA+GGG | - | tig0030427:5949-5968 | Msa1443340:intron | 30.0% | |
| ! | GAAACAGTATTTTTCTCAGA+TGG | + | tig0030427:6158-6177 | None:intergenic | 30.0% |
| ! | TGTTTCATTGGCTACATTAA+TGG | - | tig0030427:6172-6191 | Msa1443340:intron | 30.0% |
| CTTGTAAATGTTGTGATTAC+TGG | - | tig0030427:6246-6265 | Msa1443340:intron | 30.0% | |
| GAAATTCAAAAACACCTCTA+AGG | + | tig0030427:6315-6334 | None:intergenic | 30.0% | |
| ATGTGTTAAAAGTCACATAC+TGG | - | tig0030427:6546-6565 | Msa1443340:intron | 30.0% | |
| AAGCTTAAATACAACCATGA+GGG | + | tig0030427:6712-6731 | None:intergenic | 30.0% | |
| ! | ACTAGAGACTTAGATTTTGT+CGG | - | tig0030427:6865-6884 | Msa1443340:intron | 30.0% |
| ! | AATACCATCTTAGTTTGGAT+TGG | + | tig0030427:6926-6945 | None:intergenic | 30.0% |
| AAAGAATTTGAAAGGAGTCA+CGG | - | tig0030427:7094-7113 | Msa1443340:intron | 30.0% | |
| ! | TTTTCCTTGTTCAATCTGTA+AGG | - | tig0030427:7163-7182 | Msa1443340:intron | 30.0% |
| TAAGCCACTAAACAGATTTA+AGG | + | tig0030427:7263-7282 | None:intergenic | 30.0% | |
| AATGTAGTATTTGTCATGCA+AGG | - | tig0030427:5948-5967 | Msa1443340:intron | 30.0% | |
| ATGTAGTATTTGTCATGCAA+GGG | - | tig0030427:5949-5968 | Msa1443340:intron | 30.0% | |
| TCATTTCAATCTACCAATAC+AGG | + | tig0030427:7525-7544 | None:intergenic | 30.0% | |
| ! | GAAACAGTATTTTTCTCAGA+TGG | + | tig0030427:6158-6177 | None:intergenic | 30.0% |
| ! | TGTTTCATTGGCTACATTAA+TGG | - | tig0030427:6172-6191 | Msa1443340:intron | 30.0% |
| TTTGCAAGTCTACTAATGAT+AGG | + | tig0030427:7725-7744 | None:intergenic | 30.0% | |
| GAAATTCAAAAACACCTCTA+AGG | + | tig0030427:6315-6334 | None:intergenic | 30.0% | |
| ! | AGCTATTTATCTGAAACACA+TGG | - | tig0030427:7847-7866 | Msa1443340:intron | 30.0% |
| !! | ACCATGGAAACTTTTTGTTT+GGG | + | tig0030427:7889-7908 | None:intergenic | 30.0% |
| ! | TACCATGGAAACTTTTTGTT+TGG | + | tig0030427:7890-7909 | None:intergenic | 30.0% |
| TCCACTTCTCATTAAAACAT+CGG | + | tig0030427:8252-8271 | None:intergenic | 30.0% | |
| CTAGTAGGTTGTTTACTATT+TGG | - | tig0030427:8736-8755 | Msa1443340:intron | 30.0% | |
| ! | ACTAAATCTTTTCAGATGCT+CGG | - | tig0030427:8778-8797 | Msa1443340:intron | 30.0% |
| ! | TCAGATGTAGTCTTAGATTT+GGG | + | tig0030427:8962-8981 | None:intergenic | 30.0% |
| !!! | CAACGAACTTCTTTTAGAAT+AGG | + | tig0030427:8986-9005 | None:intergenic | 30.0% |
| ! | TTCTAAAAGAAGTTCGTTGA+TGG | - | tig0030427:8987-9006 | Msa1443340:intron | 30.0% |
| TCTAAAAGAAGTTCGTTGAT+GGG | - | tig0030427:8988-9007 | Msa1443340:intron | 30.0% | |
| ACTACTTAAGTCATATCACT+AGG | + | tig0030427:9075-9094 | None:intergenic | 30.0% | |
| !! | CTTTGTAAACTTTAGGATAC+AGG | + | tig0030427:9313-9332 | None:intergenic | 30.0% |
| CCTATTATACAACTGAAAAC+AGG | + | tig0030427:9346-9365 | None:intergenic | 30.0% | |
| ! | CCTGTTTTCAGTTGTATAAT+AGG | - | tig0030427:9343-9362 | Msa1443340:intron | 30.0% |
| ! | TAACCTAGGATTTCTAGATA+AGG | + | tig0030427:9451-9470 | None:intergenic | 30.0% |
| ! | TGTTTATATTTTTCTGCGCT+TGG | - | tig0030427:9515-9534 | Msa1443340:intron | 30.0% |
| TGTTTCAGATAATATAGGGA+TGG | - | tig0030427:9545-9564 | Msa1443340:intron | 30.0% | |
| ATGTCATATCAGTTTCGAAA+GGG | + | tig0030427:9576-9595 | None:intergenic | 30.0% | |
| AATGTCATATCAGTTTCGAA+AGG | + | tig0030427:9577-9596 | None:intergenic | 30.0% | |
| TGTAGAATGAGTTACTTAAC+TGG | + | tig0030427:9707-9726 | None:intergenic | 30.0% | |
| AAAGCAGAATTTACTGAAGA+TGG | - | tig0030427:9945-9964 | Msa1443340:intron | 30.0% | |
| ATTCAGTCAGAACAAACATA+TGG | - | tig0030427:10040-10059 | Msa1443340:CDS | 30.0% | |
| TGTATACAGAGTACAGTTTA+AGG | + | tig0030427:10168-10187 | None:intergenic | 30.0% | |
| TAAAGACTTCAAGATGCATT+TGG | + | tig0030427:10231-10250 | None:intergenic | 30.0% | |
| !! | CACTTTTTAACTGAGTTTGA+TGG | + | tig0030427:10376-10395 | None:intergenic | 30.0% |
| CATCAAACTCAGTTAAAAAG+TGG | - | tig0030427:10374-10393 | Msa1443340:intron | 30.0% | |
| TACATGACCATTTAACATTG+AGG | + | tig0030427:10724-10743 | None:intergenic | 30.0% | |
| GGTGCAAACATTAAACTTAA+AGG | - | tig0030427:10869-10888 | Msa1443340:intron | 30.0% | |
| TTAATACCTATAAATGCGGA+AGG | - | tig0030427:11218-11237 | Msa1443340:intron | 30.0% | |
| GAAATTCAAAGCAATAGACA+GGG | + | tig0030427:11301-11320 | None:intergenic | 30.0% | |
| AGAAATTCAAAGCAATAGAC+AGG | + | tig0030427:11302-11321 | None:intergenic | 30.0% | |
| !!! | TTAGGATAACCAACCTTTTT+TGG | - | tig0030427:11637-11656 | Msa1443340:intron | 30.0% |
| CAAATGTGATATATGACTTG+TGG | - | tig0030427:11684-11703 | Msa1443340:intron | 30.0% | |
| AGTTAGGACATATTGTCAAT+TGG | + | tig0030427:11749-11768 | None:intergenic | 30.0% | |
| ATATGTCCTAACTCAAATGA+AGG | - | tig0030427:11756-11775 | Msa1443340:intron | 30.0% | |
| !! | AGTTGGTCTTGGTTTAAAAA+TGG | - | tig0030427:11858-11877 | Msa1443340:intron | 30.0% |
| ! | TATAACTGGTTCAGCAAAAT+TGG | - | tig0030427:11968-11987 | Msa1443340:intron | 30.0% |
| CAATAAGTTAAATAGAGGGA+GGG | + | tig0030427:12034-12053 | None:intergenic | 30.0% | |
| ACAATAAGTTAAATAGAGGG+AGG | + | tig0030427:12035-12054 | None:intergenic | 30.0% | |
| TTGATGAGTTCTGTTTATGT+TGG | - | tig0030427:12065-12084 | Msa1443340:intron | 30.0% | |
| TAAGATTGCAGCAATTTAGA+TGG | + | tig0030427:12243-12262 | None:intergenic | 30.0% | |
| TAGTCAAATGTCAAAGAACT+AGG | + | tig0030427:12413-12432 | None:intergenic | 30.0% | |
| AAGCTTAAATACAACCATGA+GGG | + | tig0030427:6712-6731 | None:intergenic | 30.0% | |
| ! | AAGATTTTAAGCAATGTGAC+AGG | - | tig0030427:12807-12826 | Msa1443340:intron | 30.0% |
| TAAATTGTACCCTAGTTACT+TGG | - | tig0030427:12983-13002 | Msa1443340:CDS | 30.0% | |
| AAAATACCTATGTCATGTGA+TGG | + | tig0030427:13155-13174 | None:intergenic | 30.0% | |
| TATAAAATATGTGAACCAGC+TGG | - | tig0030427:13205-13224 | Msa1443340:intron | 30.0% | |
| ACAATTCATGAAAATGAACG+AGG | + | tig0030427:13317-13336 | None:intergenic | 30.0% | |
| ! | ATTTTCATGAATTGTGCAAC+TGG | - | tig0030427:13322-13341 | Msa1443340:intron | 30.0% |
| !! | ATTTCCAAGAGTACTTTCAT+TGG | + | tig0030427:13410-13429 | None:intergenic | 30.0% |
| !!! | ATTAATGTGTTCACTGGTTT+TGG | - | tig0030427:13535-13554 | Msa1443340:CDS | 30.0% |
| ACAAAAATATGTATGGGACT+AGG | + | tig0030427:13576-13595 | None:intergenic | 30.0% | |
| GGGTCTTACAAAAATATGTA+TGG | + | tig0030427:13583-13602 | None:intergenic | 30.0% | |
| TGTGTTAGATAAAGTTATGC+AGG | - | tig0030427:14319-14338 | Msa1443340:intron | 30.0% | |
| TGCAGGTACTTATATATTTC+TGG | - | tig0030427:14336-14355 | Msa1443340:intron | 30.0% | |
| TGCATTACTTTCTTCACAAA+TGG | - | tig0030427:14412-14431 | Msa1443340:intron | 30.0% | |
| TTCGTTAGAATGTAAGGAAA+AGG | - | tig0030427:14559-14578 | Msa1443340:intron | 30.0% | |
| GGAAAAGGTTTCATTAATAG+AGG | - | tig0030427:14574-14593 | Msa1443340:intron | 30.0% | |
| AAGGTTTCATTAATAGAGGA+AGG | - | tig0030427:14578-14597 | Msa1443340:intron | 30.0% | |
| TAAGAGGATATATAGCTGTT+TGG | - | tig0030427:14650-14669 | Msa1443340:intron | 30.0% | |
| ! | AGGAAGTATATATCAATGAC+AGG | - | tig0030427:14748-14767 | Msa1443340:intron | 30.0% |
| AAATCCCTTTATATTGGCAT+TGG | - | tig0030427:14771-14790 | Msa1443340:intron | 30.0% | |
| TTTGCCAATGCCAATATAAA+GGG | + | tig0030427:14778-14797 | None:intergenic | 30.0% | |
| ! | TTTTGCCAATGCCAATATAA+AGG | + | tig0030427:14779-14798 | None:intergenic | 30.0% |
| ATCTTCATTGGACATACAAA+AGG | + | tig0030427:14894-14913 | None:intergenic | 30.0% | |
| !!! | TATTTTTCAGGAAAAGTGAC+TGG | + | tig0030427:14932-14951 | None:intergenic | 30.0% |
| AAATAGCATGCATAGATTGT+TGG | - | tig0030427:14970-14989 | Msa1443340:intron | 30.0% | |
| GAATTAGAGACAACTTCATA+TGG | + | tig0030427:15043-15062 | None:intergenic | 30.0% | |
| AATTTACAACAGTTGGGAAA+GGG | + | tig0030427:15109-15128 | None:intergenic | 30.0% | |
| TTCACCAATTTACAACAGTT+GGG | + | tig0030427:15115-15134 | None:intergenic | 30.0% | |
| ATTCACCAATTTACAACAGT+TGG | + | tig0030427:15116-15135 | None:intergenic | 30.0% | |
| CTGTTGTAAATTGGTGAATT+TGG | - | tig0030427:15117-15136 | Msa1443340:intron | 30.0% | |
| CAAACTTCCCTTAATAATCT+GGG | + | tig0030427:15161-15180 | None:intergenic | 30.0% | |
| TCAAACTTCCCTTAATAATC+TGG | + | tig0030427:15162-15181 | None:intergenic | 30.0% | |
| CCTTCATGATATCAAATAAG+AGG | + | tig0030427:15378-15397 | None:intergenic | 30.0% | |
| ! | CCTCTTATTTGATATCATGA+AGG | - | tig0030427:15375-15394 | Msa1443340:intron | 30.0% |
| AGAATATATCAAATACCTGG+AGG | + | tig0030427:15581-15600 | None:intergenic | 30.0% | |
| TCAGAATCAAATGGTATGTT+TGG | - | tig0030427:15690-15709 | Msa1443340:intron | 30.0% | |
| ATAATCTTAACCCTGTGATA+TGG | + | tig0030427:15812-15831 | None:intergenic | 30.0% | |
| TGGCTGTTAAATAGTCAATA+TGG | - | tig0030427:15876-15895 | Msa1443340:intron | 30.0% | |
| TCGTTATCATTTCAACTCAT+AGG | + | tig0030427:15910-15929 | None:intergenic | 30.0% | |
| ! | TTGAAATGATAACGAAGCTA+AGG | - | tig0030427:15915-15934 | Msa1443340:intron | 30.0% |
| AAACATAGCTGAAATGCTAT+TGG | - | tig0030427:16379-16398 | Msa1443340:intron | 30.0% | |
| ! | TGCATTACATCTAAGATTTC+AGG | + | tig0030427:16444-16463 | None:intergenic | 30.0% |
| GAAATCTTAGATGTAATGCA+TGG | - | tig0030427:16444-16463 | Msa1443340:intron | 30.0% | |
| TTTACGAATAAGGATGATGA+TGG | - | tig0030427:16801-16820 | Msa1443340:intron | 30.0% | |
| TTACGAATAAGGATGATGAT+GGG | - | tig0030427:16802-16821 | Msa1443340:intron | 30.0% | |
| ! | ACGTTCTTTGGTTTATGATA+AGG | - | tig0030427:16880-16899 | Msa1443340:intron | 30.0% |
| ! | TAAGGTTTTTGCCATGATTA+TGG | - | tig0030427:16898-16917 | Msa1443340:intron | 30.0% |
| TTCTCAACAAACCATAATCA+TGG | + | tig0030427:16912-16931 | None:intergenic | 30.0% | |
| ATCAACCAGAAATGCTAAAT+GGG | + | tig0030427:16977-16996 | None:intergenic | 30.0% | |
| AATCAACCAGAAATGCTAAA+TGG | + | tig0030427:16978-16997 | None:intergenic | 30.0% | |
| ! | TGAATCTACCAAAATTTGCT+CGG | + | tig0030427:17002-17021 | None:intergenic | 30.0% |
| TGATATTGTTCTACAACTAG+CGG | - | tig0030427:17112-17131 | Msa1443340:CDS | 30.0% | |
| AATGATCATTCCTATTTCAG+TGG | + | tig0030427:17218-17237 | None:intergenic | 30.0% | |
| CAAAAATGGAATGGAATAGT+GGG | + | tig0030427:17250-17269 | None:intergenic | 30.0% | |
| TCAAAAATGGAATGGAATAG+TGG | + | tig0030427:17251-17270 | None:intergenic | 30.0% | |
| !! | TTCCATTCCATTTTTGACAA+CGG | - | tig0030427:17254-17273 | Msa1443340:intron | 30.0% |
| ! | TGAGAGAACCATTTGTATTT+TGG | + | tig0030427:17284-17303 | None:intergenic | 30.0% |
| TTAATGAAATTGGAATGGGT+AGG | + | tig0030427:17309-17328 | None:intergenic | 30.0% | |
| ! | TATCACTAACTATTTTACCG+GGG | + | tig0030427:17452-17471 | None:intergenic | 30.0% |
| TTGAATTGCTAAAGAATTGC+TGG | + | tig0030427:17512-17531 | None:intergenic | 30.0% | |
| !!! | AATTTTCAGGTTGCATTCTT+AGG | - | tig0030427:17725-17744 | Msa1443340:intron | 30.0% |
| !!! | ATTTTCAGGTTGCATTCTTA+GGG | - | tig0030427:17726-17745 | Msa1443340:intron | 30.0% |
| TTTAAATGACTAGATGGGAT+TGG | - | tig0030427:17947-17966 | Msa1443340:intron | 30.0% | |
| AGCACCTATATTAGAAAAGA+TGG | - | tig0030427:18007-18026 | Msa1443340:intron | 30.0% | |
| ! | TTCGCCATCTTTTCTAATAT+AGG | + | tig0030427:18014-18033 | None:intergenic | 30.0% |
| TAGAAAAGATGGCGAAAAAT+AGG | - | tig0030427:18018-18037 | Msa1443340:intron | 30.0% | |
| AAAAATAGGTTTAGGTGGTT+TGG | - | tig0030427:18032-18051 | Msa1443340:intron | 30.0% | |
| AAAATAGGTTTAGGTGGTTT+GGG | - | tig0030427:18033-18052 | Msa1443340:intron | 30.0% | |
| AGATCTAGAGATTAATGAGT+TGG | - | tig0030427:18172-18191 | Msa1443340:intron | 30.0% | |
| ! | TCTATTATCTAAAACATGGG+TGG | - | tig0030427:18363-18382 | Msa1443340:intron | 30.0% |
| GAGCTGAAAACTCAATAAAT+TGG | - | tig0030427:18385-18404 | Msa1443340:intron | 30.0% | |
| ATTCCATTGTTAACACGAAT+CGG | + | tig0030427:18589-18608 | None:intergenic | 30.0% | |
| CAAATATAAGGACAGTTACT+TGG | + | tig0030427:18933-18952 | None:intergenic | 30.0% | |
| TAGACTTATCAACAGTTCAT+AGG | - | tig0030427:19198-19217 | Msa1443340:intron | 30.0% | |
| AGACTTATCAACAGTTCATA+GGG | - | tig0030427:19199-19218 | Msa1443340:intron | 30.0% | |
| !!! | TTCATAGGGATTTTGAGTTA+GGG | - | tig0030427:19213-19232 | Msa1443340:intron | 30.0% |
| TAGAAATTCTTCCATTCTCA+GGG | + | tig0030427:19424-19443 | None:intergenic | 30.0% | |
| AATGTAGGTTTGAAAATCAG+AGG | + | tig0030427:19586-19605 | None:intergenic | 30.0% | |
| ATAGCACAAGATATTGGAAT+AGG | + | tig0030427:19655-19674 | None:intergenic | 30.0% | |
| ! | TCAATAGTCTTACAACAGAA+TGG | - | tig0030427:19749-19768 | Msa1443340:intron | 30.0% |
| ATGCTAAATAAAACACCTCT+CGG | + | tig0030427:19860-19879 | None:intergenic | 30.0% | |
| ! | CATTCTCCTATCTTTTCTTT+TGG | - | tig0030427:19880-19899 | Msa1443340:intron | 30.0% |
| !!! | AAAAACCTCTTTTTTAAGGG+AGG | - | tig0030427:20182-20201 | Msa1443340:intron | 30.0% |
| TAAGTAGACAGATATGAGAA+GGG | + | tig0030427:20276-20295 | None:intergenic | 30.0% | |
| ! | GATTTGTTCAACTTCTTTGA+AGG | - | tig0030427:20300-20319 | Msa1443340:intron | 30.0% |
| AAAGAAAACTGACCATGATT+GGG | + | tig0030427:20382-20401 | None:intergenic | 30.0% | |
| TTCATTCATCAAACAAGATC+TGG | + | tig0030427:20447-20466 | None:intergenic | 30.0% | |
| AGTATCAATGAAAGTCATGT+TGG | - | tig0030427:20663-20682 | Msa1443340:intron | 30.0% | |
| ! | TTGTTGAAGTTATAGGGTTT+TGG | - | tig0030427:20729-20748 | Msa1443340:intron | 30.0% |
| !!! | TATAGGGTTTTGGATAATGA+AGG | - | tig0030427:20739-20758 | Msa1443340:intron | 30.0% |
| !! | AACCCTGTTTTAGATAATGA+AGG | - | tig0030427:20822-20841 | Msa1443340:intron | 30.0% |
| ! | CTCCTTCATTATCTAAAACA+GGG | + | tig0030427:20827-20846 | None:intergenic | 30.0% |
| !! | CTGTTTTAGATAATGAAGGA+GGG | - | tig0030427:20826-20845 | Msa1443340:intron | 30.0% |
| !! | TGTTTTAGATAATGAAGGAG+GGG | - | tig0030427:20827-20846 | Msa1443340:intron | 30.0% |
| TAGTAGAAATAGGGGTTAAT+GGG | + | tig0030427:20902-20921 | None:intergenic | 30.0% | |
| TTAGTAGAAATAGGGGTTAA+TGG | + | tig0030427:20903-20922 | None:intergenic | 30.0% | |
| CTTAATCCTACTAAATAAGG+TGG | - | tig0030427:20942-20961 | Msa1443340:intron | 30.0% | |
| ! | TATTTGCCACCTTATTTAGT+AGG | + | tig0030427:20951-20970 | None:intergenic | 30.0% |
| TTATGTATCATAACTTCCAG+AGG | - | tig0030427:21194-21213 | Msa1443340:intron | 30.0% | |
| GCAATGACATGTTATACTAT+GGG | - | tig0030427:21246-21265 | Msa1443340:CDS | 30.0% | |
| CAATGACATGTTATACTATG+GGG | - | tig0030427:21247-21266 | Msa1443340:CDS | 30.0% | |
| ! | AGAACTTGTTTCTTTGTCTA+AGG | - | tig0030427:21286-21305 | Msa1443340:CDS | 30.0% |
| GATTGACTACAAGTGTTAAA+CGG | + | tig0030427:21533-21552 | None:intergenic | 30.0% | |
| ATAGTATGACGAGTTTAACT+TGG | + | tig0030427:21929-21948 | None:intergenic | 30.0% | |
| ! | TTGCTTGTTTACAAGTTGAA+TGG | + | tig0030427:22103-22122 | None:intergenic | 30.0% |
| ! | AACTTCTGTATGATTTGTGT+TGG | - | tig0030427:22149-22168 | Msa1443340:intron | 30.0% |
| !! | ATGATTTGTGTTGGTTTAGT+TGG | - | tig0030427:22158-22177 | Msa1443340:intron | 30.0% |
| ! | CTTACTATGTTCTTTTCCAA+TGG | - | tig0030427:22209-22228 | Msa1443340:intron | 30.0% |
| AAAAACCTAGATACCAATGA+TGG | + | tig0030427:22290-22309 | None:intergenic | 30.0% | |
| !! | AACTTCTAGTTTAGGTTTGA+TGG | - | tig0030427:22328-22347 | Msa1443340:CDS | 30.0% |
| !! | ACTTCTAGTTTAGGTTTGAT+GGG | - | tig0030427:22329-22348 | Msa1443340:CDS | 30.0% |
| AAATTGCGATATGAACCTGT+GGG | + | tig0030427:4745-4764 | None:intergenic | 35.0% | |
| CCTAACAATATTGACATTGC+CGG | - | tig0030427:4950-4969 | Msa1443340:CDS | 35.0% | |
| !! | GGATGGTTTTTAGAGGATTT+TGG | - | tig0030427:4989-5008 | Msa1443340:intron | 35.0% |
| !! | GGTTTTTAGAGGATTTTGGA+AGG | - | tig0030427:4993-5012 | Msa1443340:intron | 35.0% |
| !!! | GACCTTTTTTTTCGGAAACT+TGG | - | tig0030427:5099-5118 | Msa1443340:intron | 35.0% |
| AAATTAGTCAATCCTTGTGC+TGG | + | tig0030427:5128-5147 | None:intergenic | 35.0% | |
| AGCACAAGGATTGACTAATT+TGG | - | tig0030427:5127-5146 | Msa1443340:intron | 35.0% | |
| GCACAAGGATTGACTAATTT+GGG | - | tig0030427:5128-5147 | Msa1443340:intron | 35.0% | |
| CACAAGGATTGACTAATTTG+GGG | - | tig0030427:5129-5148 | Msa1443340:intron | 35.0% | |
| ACAAGGATTGACTAATTTGG+GGG | - | tig0030427:5130-5149 | Msa1443340:intron | 35.0% | |
| ! | TCATAGGAATTTTTGCTACC+TGG | - | tig0030427:5216-5235 | Msa1443340:intron | 35.0% |
| TTTGAACATGAGACTTAGAG+AGG | - | tig0030427:5243-5262 | Msa1443340:intron | 35.0% | |
| GTCATAAACTGTGTTTGCAT+AGG | + | tig0030427:5404-5423 | None:intergenic | 35.0% | |
| TTAACGTTGTTGTCGATGAT+GGG | - | tig0030427:5621-5640 | Msa1443340:intron | 35.0% | |
| ! | TCTTAGTGGATCAAAGAAGT+CGG | + | tig0030427:5651-5670 | None:intergenic | 35.0% |
| TAAATGGTAGTATTTGGGGA+TGG | - | tig0030427:5916-5935 | Msa1443340:intron | 35.0% | |
| !! | AAGGGAAGCATGTTTTGTAA+TGG | - | tig0030427:5967-5986 | Msa1443340:intron | 35.0% |
| TCATTTCAATCTACCAATGC+AGG | + | tig0030427:6034-6053 | None:intergenic | 35.0% | |
| TTTGATACTACCAGTGAGTT+AGG | - | tig0030427:6056-6075 | Msa1443340:intron | 35.0% | |
| TTGATACTACCAGTGAGTTA+GGG | - | tig0030427:6057-6076 | Msa1443340:intron | 35.0% | |
| ! | ATTAGGGCTGGAAATTTTTC+CGG | - | tig0030427:6093-6112 | Msa1443340:intron | 35.0% |
| ACAGCTCTATATTTGTGTAC+CGG | + | tig0030427:6115-6134 | None:intergenic | 35.0% | |
| AATCATCACAAAAGCTGAAG+AGG | + | tig0030427:6383-6402 | None:intergenic | 35.0% | |
| AGTTAGAAATTGGACCTATG+TGG | - | tig0030427:6410-6429 | Msa1443340:intron | 35.0% | |
| TTTACCACTATTCACCACAT+AGG | + | tig0030427:6427-6446 | None:intergenic | 35.0% | |
| CACTATAACTCATCCTTGTA+AGG | + | tig0030427:6618-6637 | None:intergenic | 35.0% | |
| GTTTACTATCTTATCCCTCA+TGG | - | tig0030427:6695-6714 | Msa1443340:intron | 35.0% | |
| CAAGCTTAAATACAACCATG+AGG | + | tig0030427:6713-6732 | None:intergenic | 35.0% | |
| TGTATTTAAGCTTGCCTTTG+TGG | - | tig0030427:6719-6738 | Msa1443340:intron | 35.0% | |
| GAACAATTTCTCCTCTGTAT+CGG | - | tig0030427:6813-6832 | Msa1443340:intron | 35.0% | |
| TAGAATAGAATCCGATACAG+AGG | + | tig0030427:6827-6846 | None:intergenic | 35.0% | |
| AGACGGGAAAATAGATTCTA+GGG | + | tig0030427:6896-6915 | None:intergenic | 35.0% | |
| !! | TTTGGATTGGCTATATGAGA+CGG | + | tig0030427:6913-6932 | None:intergenic | 35.0% |
| ATAGCCAATCCAAACTAAGA+TGG | - | tig0030427:6919-6938 | Msa1443340:CDS | 35.0% | |
| GCTCTAATACCATCTTAGTT+TGG | + | tig0030427:6931-6950 | None:intergenic | 35.0% | |
| AGTGTAACTGAATCCAATCA+AGG | - | tig0030427:6982-7001 | Msa1443340:intron | 35.0% | |
| AACTGAATCCAATCAAGGTT+TGG | - | tig0030427:6987-7006 | Msa1443340:intron | 35.0% | |
| TCTTACATCCAAACCTTGAT+TGG | + | tig0030427:6998-7017 | None:intergenic | 35.0% | |
| AATCAAGGTTTGGATGTAAG+AGG | - | tig0030427:6997-7016 | Msa1443340:intron | 35.0% | |
| ! | TAAGAGGTGCATATCATGAT+TGG | - | tig0030427:7013-7032 | Msa1443340:intron | 35.0% |
| GAGAGAAGAGAAGGAATATA+TGG | - | tig0030427:7045-7064 | Msa1443340:intron | 35.0% | |
| GACCTAGGAAAGAATTTGAA+AGG | - | tig0030427:7086-7105 | Msa1443340:intron | 35.0% | |
| CTCCTTTCAAATTCTTTCCT+AGG | + | tig0030427:7091-7110 | None:intergenic | 35.0% | |
| ATATGGTAGAGCTGAGAAAT+GGG | - | tig0030427:7117-7136 | Msa1443340:intron | 35.0% | |
| GCTTCCTTAAATCTGTTTAG+TGG | - | tig0030427:7256-7275 | Msa1443340:intron | 35.0% | |
| !! | GATGCACTGATTGATTTGTT+AGG | + | tig0030427:7299-7318 | None:intergenic | 35.0% |
| AGTTAGAAATTGGACCTATG+TGG | - | tig0030427:6410-6429 | Msa1443340:intron | 35.0% | |
| TTTACCACTATTCACCACAT+AGG | + | tig0030427:6427-6446 | None:intergenic | 35.0% | |
| TGATACGAAAAAGTTTGGGA+TGG | - | tig0030427:7407-7426 | Msa1443340:intron | 35.0% | |
| !! | AAGGGAAGCATGTTTTGTAA+TGG | - | tig0030427:5967-5986 | Msa1443340:intron | 35.0% |
| ACATTCTTACTTGCCTGTAT+TGG | - | tig0030427:7509-7528 | Msa1443340:intron | 35.0% | |
| TTTGATACTACCAGTGAGTT+AGG | - | tig0030427:6056-6075 | Msa1443340:intron | 35.0% | |
| TTGATACTACCAGTGAGTTA+GGG | - | tig0030427:6057-6076 | Msa1443340:intron | 35.0% | |
| ! | ATTAGGGCTGGAAATTTTTC+CGG | - | tig0030427:6093-6112 | Msa1443340:intron | 35.0% |
| ACAGCTCTATATTTGTGTAC+CGG | + | tig0030427:6115-6134 | None:intergenic | 35.0% | |
| AGCTGTCTCATATTGTTCAT+TGG | - | tig0030427:6129-6148 | Msa1443340:intron | 35.0% | |
| CTTGCAAATGTTGTGATTAC+TGG | - | tig0030427:7737-7756 | Msa1443340:intron | 35.0% | |
| !! | ATGGAAACTTTTTGTTTGGG+GGG | + | tig0030427:7886-7905 | None:intergenic | 35.0% |
| !! | CATGGAAACTTTTTGTTTGG+GGG | + | tig0030427:7887-7906 | None:intergenic | 35.0% |
| !! | CCATGGAAACTTTTTGTTTG+GGG | + | tig0030427:7888-7907 | None:intergenic | 35.0% |
| AGTTTCCATGGTAAAGAACA+TGG | - | tig0030427:7897-7916 | Msa1443340:intron | 35.0% | |
| ! | AAAAAGGGGAAGCATGATAA+TGG | + | tig0030427:7933-7952 | None:intergenic | 35.0% |
| CCACTTCTCATTAAAACATC+GGG | + | tig0030427:8251-8270 | None:intergenic | 35.0% | |
| CTTGTCATGTGCTGAAAATT+GGG | + | tig0030427:8361-8380 | None:intergenic | 35.0% | |
| ACTTGTCATGTGCTGAAAAT+TGG | + | tig0030427:8362-8381 | None:intergenic | 35.0% | |
| TCCACAAAAATTTGCAGATG+AGG | - | tig0030427:8416-8435 | Msa1443340:intron | 35.0% | |
| CCACAAAAATTTGCAGATGA+GGG | - | tig0030427:8417-8436 | Msa1443340:intron | 35.0% | |
| AGCTCAAAGATGAAATTACC+CGG | - | tig0030427:8484-8503 | Msa1443340:intron | 35.0% | |
| !! | ACTCGAAGGTTTTATCTAGT+AGG | - | tig0030427:8721-8740 | Msa1443340:intron | 35.0% |
| ! | CTCAGATGTAGTCTTAGATT+TGG | + | tig0030427:8963-8982 | None:intergenic | 35.0% |
| AATTGAAATCAAGTCCCCAA+GGG | - | tig0030427:9125-9144 | Msa1443340:intron | 35.0% | |
| TTTATATGAGTCAACCCTTG+GGG | + | tig0030427:9142-9161 | None:intergenic | 35.0% | |
| GTTTATATGAGTCAACCCTT+GGG | + | tig0030427:9143-9162 | None:intergenic | 35.0% | |
| TGACCTTATCTAGAAATCCT+AGG | - | tig0030427:9445-9464 | Msa1443340:CDS | 35.0% | |
| TAAAGAAGGATCTCTAACCT+AGG | + | tig0030427:9465-9484 | None:intergenic | 35.0% | |
| TTTATGTAACCTCTCAGGTT+AGG | - | tig0030427:9481-9500 | Msa1443340:CDS | 35.0% | |
| TGAGTGTGAATAAAGCACAA+AGG | + | tig0030427:9615-9634 | None:intergenic | 35.0% | |
| ATTCTACAAACTTGAGAGTG+AGG | - | tig0030427:9719-9738 | Msa1443340:intron | 35.0% | |
| TTCTACAAACTTGAGAGTGA+GGG | - | tig0030427:9720-9739 | Msa1443340:intron | 35.0% | |
| GATCTCAATTGTAATGCTAG+TGG | - | tig0030427:9770-9789 | Msa1443340:intron | 35.0% | |
| ACAGATATCATGGACATGAT+TGG | - | tig0030427:9894-9913 | Msa1443340:intron | 35.0% | |
| CAGATATCATGGACATGATT+GGG | - | tig0030427:9895-9914 | Msa1443340:intron | 35.0% | |
| AGATATCATGGACATGATTG+GGG | - | tig0030427:9896-9915 | Msa1443340:intron | 35.0% | |
| AACTGTACTCTGTATACAAC+TGG | - | tig0030427:10170-10189 | Msa1443340:CDS | 35.0% | |
| ACTGTACTCTGTATACAACT+GGG | - | tig0030427:10171-10190 | Msa1443340:CDS | 35.0% | |
| !! | GCTCACTTTTACTGACATAA+AGG | + | tig0030427:10308-10327 | None:intergenic | 35.0% |
| AACTGAGTTTGATGGAAAGA+GGG | + | tig0030427:10368-10387 | None:intergenic | 35.0% | |
| TAACTGAGTTTGATGGAAAG+AGG | + | tig0030427:10369-10388 | None:intergenic | 35.0% | |
| GTTATGTGAACGTTTATTGC+TGG | - | tig0030427:10396-10415 | Msa1443340:intron | 35.0% | |
| !! | ATAGGTGTTTTGTTCTGTCT+TGG | - | tig0030427:10450-10469 | Msa1443340:intron | 35.0% |
| !! | ATAGGTGTTTTGTTCTGTCT+TGG | - | tig0030427:10450-10469 | Msa1443340:intron | 35.0% |
| ATGACCATTTAACATTGAGG+TGG | + | tig0030427:10721-10740 | None:intergenic | 35.0% | |
| AAAAACTCAAAGGACTGATC+CGG | - | tig0030427:10848-10867 | Msa1443340:intron | 35.0% | |
| ! | TTTTTCTGTAAGTTCACAGC+TGG | - | tig0030427:10964-10983 | Msa1443340:intron | 35.0% |
| ACTGAAGTGAGATATTCAAC+AGG | + | tig0030427:10993-11012 | None:intergenic | 35.0% | |
| AGTTGTATTCATGGATGTTC+AGG | - | tig0030427:11273-11292 | Msa1443340:intron | 35.0% | |
| CAATAATTACAGAGGGATGT+GGG | + | tig0030427:11529-11548 | None:intergenic | 35.0% | |
| ACAATAATTACAGAGGGATG+TGG | + | tig0030427:11530-11549 | None:intergenic | 35.0% | |
| CCAACGACAATAATTACAGA+GGG | + | tig0030427:11536-11555 | None:intergenic | 35.0% | |
| CATGGATATCCAAAAAAGGT+TGG | + | tig0030427:11649-11668 | None:intergenic | 35.0% | |
| GATGCATGGATATCCAAAAA+AGG | + | tig0030427:11653-11672 | None:intergenic | 35.0% | |
| ! | TGACTTGTGGAAATAGAGTT+TGG | - | tig0030427:11697-11716 | Msa1443340:intron | 35.0% |
| ! | GTGACTTGTAATGTTTGAGA+TGG | + | tig0030427:11788-11807 | None:intergenic | 35.0% |
| ATAGCAAGTTTCTTTGGCAT+CGG | + | tig0030427:11951-11970 | None:intergenic | 35.0% | |
| CCAGTTATAGCAAGTTTCTT+TGG | + | tig0030427:11957-11976 | None:intergenic | 35.0% | |
| !! | CCAAAGAAACTTGCTATAAC+TGG | - | tig0030427:11954-11973 | Msa1443340:intron | 35.0% |
| AAATAGCCATTCTTCTTTGC+TGG | - | tig0030427:12283-12302 | Msa1443340:intron | 35.0% | |
| ! | AAAAGCATAAGCAGTTAGCA+CGG | + | tig0030427:12349-12368 | None:intergenic | 35.0% |
| ! | TGCTAACTGCTTATGCTTTT+GGG | - | tig0030427:12349-12368 | Msa1443340:intron | 35.0% |
| !!! | CTTATGCTTTTGGGATAATC+TGG | - | tig0030427:12358-12377 | Msa1443340:intron | 35.0% |
| ATGTGTTAAGAGTCACATAC+TGG | - | tig0030427:12447-12466 | Msa1443340:intron | 35.0% | |
| CACTATAACTCATCCTTGTA+AGG | + | tig0030427:6618-6637 | None:intergenic | 35.0% | |
| GTTTACTATCTTATCCCTCA+TGG | - | tig0030427:6695-6714 | Msa1443340:intron | 35.0% | |
| CAAGCTTAAATACAACCATG+AGG | + | tig0030427:6713-6732 | None:intergenic | 35.0% | |
| TGTATTTAAGCTTGCCTTTG+TGG | - | tig0030427:6719-6738 | Msa1443340:intron | 35.0% | |
| TGCAGATATGTACTTTGTTG+TGG | - | tig0030427:12723-12742 | Msa1443340:CDS | 35.0% | |
| !!! | CTGTTTTAACACTCTATGAG+AGG | + | tig0030427:12787-12806 | None:intergenic | 35.0% |
| TGCATATTGCCGTCTATATA+TGG | - | tig0030427:13109-13128 | Msa1443340:intron | 35.0% | |
| CACAATGAGCCATATATAGA+CGG | + | tig0030427:13121-13140 | None:intergenic | 35.0% | |
| !! | ATATTTTAAAAGGGTCCAGC+TGG | + | tig0030427:13223-13242 | None:intergenic | 35.0% |
| !!! | CTGGACCCTTTTAAAATATG+TGG | - | tig0030427:13224-13243 | Msa1443340:intron | 35.0% |
| !!! | GAATCCAGAGATTTTTTGTC+TGG | - | tig0030427:13260-13279 | Msa1443340:intron | 35.0% |
| AAGACCAGACAAAAAATCTC+TGG | + | tig0030427:13267-13286 | None:intergenic | 35.0% | |
| AAAATTGCAAATCAGCCTGA+TGG | - | tig0030427:13444-13463 | Msa1443340:intron | 35.0% | |
| !! | TATATTTAGCGGGTTATCTC+AGG | - | tig0030427:13495-13514 | Msa1443340:intron | 35.0% |
| TGAAGCAAAACATCATTGGT+CGG | - | tig0030427:13662-13681 | Msa1443340:intron | 35.0% | |
| ATGCACATAGCTACATGTTT+AGG | - | tig0030427:13757-13776 | Msa1443340:intron | 35.0% | |
| TGCACATAGCTACATGTTTA+GGG | - | tig0030427:13758-13777 | Msa1443340:intron | 35.0% | |
| GATATTGAAGAGTAAGGCAT+AGG | + | tig0030427:13819-13838 | None:intergenic | 35.0% | |
| AGCATAACACAGGATAAAGA+CGG | + | tig0030427:13912-13931 | None:intergenic | 35.0% | |
| TACTTAGATCAGCATAACAC+AGG | + | tig0030427:13922-13941 | None:intergenic | 35.0% | |
| AATGAAGTTCTATCAGAGCT+TGG | - | tig0030427:13968-13987 | Msa1443340:CDS | 35.0% | |
| TGAGACTGTTTCATGTGTTT+CGG | - | tig0030427:14015-14034 | Msa1443340:intron | 35.0% | |
| ACCTGAATTACAGATTGCTT+GGG | - | tig0030427:14252-14271 | Msa1443340:intron | 35.0% | |
| !! | ACAGCATTGACAATGTTAAC+CGG | + | tig0030427:14302-14321 | None:intergenic | 35.0% |
| ATAATACACCATTTCCCCAA+AGG | + | tig0030427:14478-14497 | None:intergenic | 35.0% | |
| !! | ATCTTTGTTGTTTCCTCTAG+TGG | - | tig0030427:14496-14515 | Msa1443340:intron | 35.0% |
| GACAGGAAATCCCTTTATAT+TGG | - | tig0030427:14765-14784 | Msa1443340:intron | 35.0% | |
| ATTCGAACAGCTATCTTCAT+TGG | + | tig0030427:14906-14925 | None:intergenic | 35.0% | |
| AAGTTGTGTGTATGCATGTA+TGG | - | tig0030427:15004-15023 | Msa1443340:CDS | 35.0% | |
| AGTTGTGTGTATGCATGTAT+GGG | - | tig0030427:15005-15024 | Msa1443340:CDS | 35.0% | |
| CAATTTACAACAGTTGGGAA+AGG | + | tig0030427:15110-15129 | None:intergenic | 35.0% | |
| CTTTCCCAACTGTTGTAAAT+TGG | - | tig0030427:15108-15127 | Msa1443340:intron | 35.0% | |
| AAGGGAAGTTTGATCAGTTA+AGG | - | tig0030427:15169-15188 | Msa1443340:intron | 35.0% | |
| ! | TTGATCAGTTAAGGAAGTGT+TGG | - | tig0030427:15178-15197 | Msa1443340:intron | 35.0% |
| TATCAAATAAGAGGGGTTTC+TGG | + | tig0030427:15369-15388 | None:intergenic | 35.0% | |
| TCACAGGGTTAAGATTATTG+AGG | - | tig0030427:15814-15833 | Msa1443340:intron | 35.0% | |
| ! | CATTTGGACATCATTTTGAG+AGG | - | tig0030427:16174-16193 | Msa1443340:intron | 35.0% |
| ! | TCTGGAAGATGTGTTTTATC+TGG | - | tig0030427:16290-16309 | Msa1443340:intron | 35.0% |
| ACTGTTCTTCCACTCATTAT+TGG | - | tig0030427:16543-16562 | Msa1443340:intron | 35.0% | |
| ATATGAGTGCCAATAATGAG+TGG | + | tig0030427:16555-16574 | None:intergenic | 35.0% | |
| TACACGTATTTGTGCATTTG+TGG | - | tig0030427:16607-16626 | Msa1443340:intron | 35.0% | |
| ! | AATTCCAACTTTTCATTCGG+TGG | - | tig0030427:16637-16656 | Msa1443340:intron | 35.0% |
| ! | TATTATTTGTTGAGCAGGAG+TGG | - | tig0030427:16708-16727 | Msa1443340:intron | 35.0% |
| !! | CTTGCTTTCTGAAATTTCTC+AGG | - | tig0030427:16758-16777 | Msa1443340:intron | 35.0% |
| TCAGGCTCTACATGATAATA+TGG | - | tig0030427:16776-16795 | Msa1443340:intron | 35.0% | |
| GCTAATTGCTAGGTAGATTA+TGG | - | tig0030427:16937-16956 | Msa1443340:intron | 35.0% | |
| TTGCTAGGTAGATTATGGAA+CGG | - | tig0030427:16942-16961 | Msa1443340:intron | 35.0% | |
| GAACAATATCAGATGTTCTG+AGG | + | tig0030427:17103-17122 | None:intergenic | 35.0% | |
| TAACTTACCCTTGTAATGCA+CGG | + | tig0030427:17144-17163 | None:intergenic | 35.0% | |
| TGCATTACAAGGGTAAGTTA+TGG | - | tig0030427:17144-17163 | Msa1443340:CDS | 35.0% | |
| GCATTACAAGGGTAAGTTAT+GGG | - | tig0030427:17145-17164 | Msa1443340:CDS | 35.0% | |
| TGGCAACATAAGGAATAGAA+TGG | + | tig0030427:17194-17213 | None:intergenic | 35.0% | |
| ATCATTCCTATTTCAGTGGT+TGG | + | tig0030427:17214-17233 | None:intergenic | 35.0% | |
| TTCCGTTGTCAAAAATGGAA+TGG | + | tig0030427:17259-17278 | None:intergenic | 35.0% | |
| ACGGAACACCAAAATACAAA+TGG | - | tig0030427:17273-17292 | Msa1443340:intron | 35.0% | |
| !!! | GGTACACCGAATTTTTTTCA+AGG | + | tig0030427:17335-17354 | None:intergenic | 35.0% |
| CTTACGAGTATAAAGTCTAG+AGG | - | tig0030427:17364-17383 | Msa1443340:intron | 35.0% | |
| !!! | TTTTCAGGTTGCATTCTTAG+GGG | - | tig0030427:17727-17746 | Msa1443340:intron | 35.0% |
| !! | GTAGATGGATTGATTGATTC+AGG | - | tig0030427:17764-17783 | Msa1443340:intron | 35.0% |
| ! | GGATTGATTGATTCAGGAAT+TGG | - | tig0030427:17770-17789 | Msa1443340:intron | 35.0% |
| ! | TTGGTTGGGTGAACATTTTA+AGG | + | tig0030427:17825-17844 | None:intergenic | 35.0% |
| ! | TTAGTACTTCCACATTGGTT+GGG | + | tig0030427:17839-17858 | None:intergenic | 35.0% |
| AGATGGCGAAAAATAGGTTT+AGG | - | tig0030427:18024-18043 | Msa1443340:intron | 35.0% | |
| GATGATAGTCAAATCACTAG+AGG | - | tig0030427:18107-18126 | Msa1443340:intron | 35.0% | |
| AGTCTTTAATAGGGCTACAA+GGG | + | tig0030427:18758-18777 | None:intergenic | 35.0% | |
| AAGTCTTTAATAGGGCTACA+AGG | + | tig0030427:18759-18778 | None:intergenic | 35.0% | |
| TCTTGGAGTAACAAAGAAGT+GGG | + | tig0030427:18973-18992 | None:intergenic | 35.0% | |
| ATCTTGGAGTAACAAAGAAG+TGG | + | tig0030427:18974-18993 | None:intergenic | 35.0% | |
| GGATTTGAATGACTAGATCA+AGG | + | tig0030427:19081-19100 | None:intergenic | 35.0% | |
| ! | CGCAAAGGAATTTTCTTGAA+TGG | + | tig0030427:19102-19121 | None:intergenic | 35.0% |
| GAAAATTCCTTTGCGATACT+CGG | - | tig0030427:19107-19126 | Msa1443340:intron | 35.0% | |
| AAAATTCCTTTGCGATACTC+GGG | - | tig0030427:19108-19127 | Msa1443340:intron | 35.0% | |
| AAAGAGAACAACTTGAACTC+AGG | + | tig0030427:19153-19172 | None:intergenic | 35.0% | |
| ! | AAGTCTAAAACAGAAAGGGA+AGG | + | tig0030427:19185-19204 | None:intergenic | 35.0% |
| !!! | GTTCATAGGGATTTTGAGTT+AGG | - | tig0030427:19212-19231 | Msa1443340:intron | 35.0% |
| !! | GGGCTCTAAATTGATTTCAA+TGG | + | tig0030427:19307-19326 | None:intergenic | 35.0% |
| TTAGGAAGCAATATAGGGTA+GGG | + | tig0030427:19327-19346 | None:intergenic | 35.0% | |
| TTTAGGAAGCAATATAGGGT+AGG | + | tig0030427:19328-19347 | None:intergenic | 35.0% | |
| AGAAATTCTTCCATTCTCAG+GGG | + | tig0030427:19423-19442 | None:intergenic | 35.0% | |
| CTAGAAATTCTTCCATTCTC+AGG | + | tig0030427:19425-19444 | None:intergenic | 35.0% | |
| GGCAACAAATTTGAAAGCAA+AGG | + | tig0030427:19488-19507 | None:intergenic | 35.0% | |
| CTAAACCAAAACACACAACA+CGG | + | tig0030427:19523-19542 | None:intergenic | 35.0% | |
| AGATTGAAGCTCTTGAATGT+AGG | + | tig0030427:19601-19620 | None:intergenic | 35.0% | |
| ACTGTCATAGCACAAGATAT+TGG | + | tig0030427:19661-19680 | None:intergenic | 35.0% | |
| TTACAACAGAATGGATACAG+AGG | - | tig0030427:19758-19777 | Msa1443340:intron | 35.0% | |
| AATGGATACAGAGGAAATGA+GGG | - | tig0030427:19767-19786 | Msa1443340:intron | 35.0% | |
| AAGCACCCAAAAGAAAAGAT+AGG | + | tig0030427:19889-19908 | None:intergenic | 35.0% | |
| ! | CATTCTTTAGAAAGAAGCCA+TGG | + | tig0030427:19969-19988 | None:intergenic | 35.0% |
| GGATACAAAGAATGCAATTG+AGG | + | tig0030427:20005-20024 | None:intergenic | 35.0% | |
| GCTGTGTAGCTTCTTAATTA+TGG | - | tig0030427:20110-20129 | Msa1443340:intron | 35.0% | |
| AAGTAGACAGATATGAGAAG+GGG | + | tig0030427:20275-20294 | None:intergenic | 35.0% | |
| GTAAGTAGACAGATATGAGA+AGG | + | tig0030427:20277-20296 | None:intergenic | 35.0% | |
| TTATTAGGGAAGTAGGTAAC+TGG | + | tig0030427:20339-20358 | None:intergenic | 35.0% | |
| CAAAGAAAACTGACCATGAT+TGG | + | tig0030427:20383-20402 | None:intergenic | 35.0% | |
| !! | AAATCCGTGTCCTCATTTTT+GGG | + | tig0030427:20493-20512 | None:intergenic | 35.0% |
| ! | AAAATCCGTGTCCTCATTTT+TGG | + | tig0030427:20494-20513 | None:intergenic | 35.0% |
| ACCTGTGTATTTGCATGATA+TGG | + | tig0030427:20563-20582 | None:intergenic | 35.0% | |
| TCCAGAGTAATGCGTTTATT+TGG | - | tig0030427:20704-20723 | Msa1443340:intron | 35.0% | |
| CCAGAGTAATGCGTTTATTT+GGG | - | tig0030427:20705-20724 | Msa1443340:intron | 35.0% | |
| CAGAGTAATGCGTTTATTTG+GGG | - | tig0030427:20706-20725 | Msa1443340:intron | 35.0% | |
| ! | TTTGGGGTTGTTGAAGTTAT+AGG | - | tig0030427:20722-20741 | Msa1443340:intron | 35.0% |
| TTGGGGTTGTTGAAGTTATA+GGG | - | tig0030427:20723-20742 | Msa1443340:intron | 35.0% | |
| ! | CCTCCTTCATTATCTAAAAC+AGG | + | tig0030427:20828-20847 | None:intergenic | 35.0% |
| !! | CCTGTTTTAGATAATGAAGG+AGG | - | tig0030427:20825-20844 | Msa1443340:intron | 35.0% |
| AGGAAAAAAACAGAATCCTC+TGG | + | tig0030427:21213-21232 | None:intergenic | 35.0% | |
| !!! | TTTTTTCCTTTCCAGATACC+AGG | - | tig0030427:21224-21243 | Msa1443340:CDS | 35.0% |
| TAGTATAACATGTCATTGCC+TGG | + | tig0030427:21245-21264 | None:intergenic | 35.0% | |
| GGCAATGACATGTTATACTA+TGG | - | tig0030427:21245-21264 | Msa1443340:CDS | 35.0% | |
| ACCATAACTAATGCGTGATT+TGG | - | tig0030427:21633-21652 | Msa1443340:intron | 35.0% | |
| CCATAACTAATGCGTGATTT+GGG | - | tig0030427:21634-21653 | Msa1443340:intron | 35.0% | |
| !! | AAAAAGTGCTGAATACAACG+AGG | + | tig0030427:21712-21731 | None:intergenic | 35.0% |
| TTGATCAACATCATACTAGC+CGG | + | tig0030427:21905-21924 | None:intergenic | 35.0% | |
| ! | TTACAAGTTGAATGGTTGAC+TGG | + | tig0030427:22095-22114 | None:intergenic | 35.0% |
| !! | TTGTGTTGGTTTAGTTGGAT+TGG | - | tig0030427:22163-22182 | Msa1443340:intron | 35.0% |
| CTCAAACTAATTAGTCCCAT+TGG | + | tig0030427:22228-22247 | None:intergenic | 35.0% | |
| TTAAGGGAAAGAACCATCAT+TGG | - | tig0030427:22274-22293 | Msa1443340:CDS | 35.0% | |
| AAGAACCATCATTGGTATCT+AGG | - | tig0030427:22282-22301 | Msa1443340:CDS | 35.0% | |
| !! | TGTTCGTGAACTTCTAGTTT+AGG | - | tig0030427:22320-22339 | Msa1443340:CDS | 35.0% |
| TCGTGATTACCAAACTGAGA+AGG | - | tig0030427:4655-4674 | Msa1443340:three_prime_UTR | 40.0% | |
| GAAATTGCGATATGAACCTG+TGG | + | tig0030427:4746-4765 | None:intergenic | 40.0% | |
| CCGGCAATGTCAATATTGTT+AGG | + | tig0030427:4953-4972 | None:intergenic | 40.0% | |
| !! | ACCTTAGGGATGGTTTTTAG+AGG | - | tig0030427:4982-5001 | Msa1443340:CDS | 40.0% |
| ! | TCCTCTAAAAACCATCCCTA+AGG | + | tig0030427:4986-5005 | None:intergenic | 40.0% |
| ATGATGTGCGAGTCAATACA+GGG | + | tig0030427:5200-5219 | None:intergenic | 40.0% | |
| TATGATGTGCGAGTCAATAC+AGG | + | tig0030427:5201-5220 | None:intergenic | 40.0% | |
| !! | TGTATTGACTCGCACATCAT+AGG | - | tig0030427:5200-5219 | Msa1443340:intron | 40.0% |
| ! | TAGGAATTTTTGCTACCTGG+AGG | - | tig0030427:5219-5238 | Msa1443340:intron | 40.0% |
| TAAACTGTGTTTGCATAGGG+TGG | + | tig0030427:5400-5419 | None:intergenic | 40.0% | |
| GTTAACGTTGTTGTCGATGA+TGG | - | tig0030427:5620-5639 | Msa1443340:intron | 40.0% | |
| GACTTCTTTGATCCACTAAG+AGG | - | tig0030427:5650-5669 | Msa1443340:intron | 40.0% | |
| TTCTTTGATCCACTAAGAGG+AGG | - | tig0030427:5653-5672 | Msa1443340:intron | 40.0% | |
| !! | TCATTCAAGTTGACAGGTTC+TGG | + | tig0030427:5707-5726 | None:intergenic | 40.0% |
| !! | GCAACTTCATTCAAGTTGAC+AGG | + | tig0030427:5713-5732 | None:intergenic | 40.0% |
| GTCAACTTGAATGAAGTTGC+TGG | - | tig0030427:5713-5732 | Msa1443340:CDS | 40.0% | |
| CATTAGTAGTCTCCTGAAAG+AGG | + | tig0030427:5762-5781 | None:intergenic | 40.0% | |
| TTAGTATTTGGGGATGGTTG+AGG | - | tig0030427:5892-5911 | Msa1443340:intron | 40.0% | |
| ACATTCTTACTTGCCTGCAT+TGG | - | tig0030427:6018-6037 | Msa1443340:intron | 40.0% | |
| TACTTTATGCAGTCCCTTAG+AGG | - | tig0030427:6298-6317 | Msa1443340:intron | 40.0% | |
| TGATACGAAAAAGTTTGGGC+TGG | - | tig0030427:6459-6478 | Msa1443340:CDS | 40.0% | |
| !!! | TTGGGCTGGCTATATTTTGT+AGG | - | tig0030427:6473-6492 | Msa1443340:CDS | 40.0% |
| !!! | TGTAGGATTATTTTGGGCAG+TGG | - | tig0030427:6490-6509 | Msa1443340:CDS | 40.0% |
| TAACTCATCCTTGTAAGGTG+AGG | + | tig0030427:6613-6632 | None:intergenic | 40.0% | |
| GAGACGGGAAAATAGATTCT+AGG | + | tig0030427:6897-6916 | None:intergenic | 40.0% | |
| !! | TTGGATTGGCTATATGAGAC+GGG | + | tig0030427:6912-6931 | None:intergenic | 40.0% |
| GAGTAATGACAGAATGACCT+AGG | - | tig0030427:7071-7090 | Msa1443340:intron | 40.0% | |
| TTTGAAAGGAGTCACGGATA+TGG | - | tig0030427:7100-7119 | Msa1443340:intron | 40.0% | |
| GATATGGTAGAGCTGAGAAA+TGG | - | tig0030427:7116-7135 | Msa1443340:intron | 40.0% | |
| TATGGTAGAGCTGAGAAATG+GGG | - | tig0030427:7118-7137 | Msa1443340:intron | 40.0% | |
| AGCTCCTTACAGATTGAACA+AGG | + | tig0030427:7170-7189 | None:intergenic | 40.0% | |
| TGGGACAGTGTAAAACAGAT+TGG | + | tig0030427:7199-7218 | None:intergenic | 40.0% | |
| TCTGTTTAGTGGCTTACAGT+AGG | - | tig0030427:7267-7286 | Msa1443340:intron | 40.0% | |
| TACTTTATGCAGTCCCTTAG+AGG | - | tig0030427:6298-6317 | Msa1443340:intron | 40.0% | |
| !! | AAACTTTTTGTTTGGGGGGT+GGG | + | tig0030427:7882-7901 | None:intergenic | 40.0% |
| CCCCAAACAAAAAGTTTCCA+TGG | - | tig0030427:7885-7904 | Msa1443340:intron | 40.0% | |
| !! | AAGCATGATAATGGCCATTC+CGG | + | tig0030427:7924-7943 | None:intergenic | 40.0% |
| AAGTAAACAGCTCGTCACAA+GGG | + | tig0030427:7985-8004 | None:intergenic | 40.0% | |
| !!! | CCCGATGTTTTAATGAGAAG+TGG | - | tig0030427:8248-8267 | Msa1443340:intron | 40.0% |
| ! | CCCTCATCTGCAAATTTTTG+TGG | + | tig0030427:8420-8439 | None:intergenic | 40.0% |
| AAGATGAAATTACCCGGTCT+TGG | - | tig0030427:8490-8509 | Msa1443340:intron | 40.0% | |
| CAAAACTGGATTGTAAGGTG+AGG | + | tig0030427:8917-8936 | None:intergenic | 40.0% | |
| CCTCACAAAACTGGATTGTA+AGG | + | tig0030427:8922-8941 | None:intergenic | 40.0% | |
| !! | CCTTACAATCCAGTTTTGTG+AGG | - | tig0030427:8919-8938 | Msa1443340:intron | 40.0% |
| CTAACTCAACCTCACAAAAC+TGG | + | tig0030427:8931-8950 | None:intergenic | 40.0% | |
| !! | CAGTTTTGTGAGGTTGAGTT+AGG | - | tig0030427:8929-8948 | Msa1443340:intron | 40.0% |
| AAGTAGTGTTTGTCACCCTT+AGG | - | tig0030427:9088-9107 | Msa1443340:intron | 40.0% | |
| GGACTTGATTTCAATTGACC+AGG | + | tig0030427:9121-9140 | None:intergenic | 40.0% | |
| CAATTGAAATCAAGTCCCCA+AGG | - | tig0030427:9124-9143 | Msa1443340:intron | 40.0% | |
| GGTTTATATGAGTCAACCCT+TGG | + | tig0030427:9144-9163 | None:intergenic | 40.0% | |
| CCTGAGAGGTTACATAAAGA+AGG | + | tig0030427:9479-9498 | None:intergenic | 40.0% | |
| CCTTCTTTATGTAACCTCTC+AGG | - | tig0030427:9476-9495 | Msa1443340:CDS | 40.0% | |
| AAGAACTATCCTAACCTGAG+AGG | + | tig0030427:9493-9512 | None:intergenic | 40.0% | |
| ! | TTTGCAGGTTGCTAAGCTTT+TGG | - | tig0030427:9824-9843 | Msa1443340:intron | 40.0% |
| GTGACAAGGACAAATAGAGT+GGG | + | tig0030427:9876-9895 | None:intergenic | 40.0% | |
| TGTGACAAGGACAAATAGAG+TGG | + | tig0030427:9877-9896 | None:intergenic | 40.0% | |
| TGTCCTTGTCACAGATATCA+TGG | - | tig0030427:9884-9903 | Msa1443340:intron | 40.0% | |
| TGTCCATGATATCTGTGACA+AGG | + | tig0030427:9890-9909 | None:intergenic | 40.0% | |
| TGGAACTTTACTCTGCAACT+TGG | - | tig0030427:9965-9984 | Msa1443340:intron | 40.0% | |
| GAAAAATCATTAGCACGCTG+CGG | + | tig0030427:10071-10090 | None:intergenic | 40.0% | |
| GTTTGATGGAAAGAGGGTAA+CGG | + | tig0030427:10362-10381 | None:intergenic | 40.0% | |
| ATTCACCGCTCTCAAAACTA+GGG | - | tig0030427:10424-10443 | Msa1443340:intron | 40.0% | |
| !!! | ATCAACCCTAGTTTTGAGAG+CGG | + | tig0030427:10432-10451 | None:intergenic | 40.0% |
| ! | CTCTCAAAACTAGGGTTGAT+AGG | - | tig0030427:10432-10451 | Msa1443340:intron | 40.0% |
| AATTCACCGCTCTCAAAACT+AGG | - | tig0030427:10539-10558 | Msa1443340:CDS | 40.0% | |
| ATTCACCGCTCTCAAAACTA+GGG | - | tig0030427:10424-10443 | Msa1443340:intron | 40.0% | |
| !!! | ATGAACCCTAGTTTTGAGAG+CGG | + | tig0030427:10548-10567 | None:intergenic | 40.0% |
| CTCTCAAAACTAGGGTTCAT+AGG | - | tig0030427:10548-10567 | Msa1443340:CDS | 40.0% | |
| CCATTTAACATTGAGGTGGA+AGG | + | tig0030427:10717-10736 | None:intergenic | 40.0% | |
| CCTTCCACCTCAATGTTAAA+TGG | - | tig0030427:10714-10733 | Msa1443340:CDS | 40.0% | |
| GTTCACCATTGCTGACATAA+AGG | - | tig0030427:10809-10828 | Msa1443340:CDS | 40.0% | |
| TTGGTCCTTTATGTCAGCAA+TGG | + | tig0030427:10817-10836 | None:intergenic | 40.0% | |
| CATTAAACTTAAAGGACCCC+AGG | - | tig0030427:10877-10896 | Msa1443340:intron | 40.0% | |
| TATTAGGCAGAATGCATCCT+GGG | + | tig0030427:10897-10916 | None:intergenic | 40.0% | |
| TTATTAGGCAGAATGCATCC+TGG | + | tig0030427:10898-10917 | None:intergenic | 40.0% | |
| TCACAACTTGTCCTGGTATT+TGG | + | tig0030427:11022-11041 | None:intergenic | 40.0% | |
| ATCATGTTCACAACTTGTCC+TGG | + | tig0030427:11029-11048 | None:intergenic | 40.0% | |
| TACAAGCCTTCCGCATTTAT+AGG | + | tig0030427:11227-11246 | None:intergenic | 40.0% | |
| CCCTCTGTAATTATTGTCGT+TGG | - | tig0030427:11533-11552 | Msa1443340:intron | 40.0% | |
| GCCAACGACAATAATTACAG+AGG | + | tig0030427:11537-11556 | None:intergenic | 40.0% | |
| GTAGGGACTATGCAAAAACA+AGG | - | tig0030427:11570-11589 | Msa1443340:intron | 40.0% | |
| TGGATATCCATGCATCATAG+AGG | - | tig0030427:11657-11676 | Msa1443340:intron | 40.0% | |
| ! | TGTAATGTTTGAGATGGCGA+GGG | + | tig0030427:11782-11801 | None:intergenic | 40.0% |
| ! | TTGTAATGTTTGAGATGGCG+AGG | + | tig0030427:11783-11802 | None:intergenic | 40.0% |
| GATGCAGATGGAAACATGTT+TGG | + | tig0030427:11810-11829 | None:intergenic | 40.0% | |
| GATTGTCTGCAAGAGATAGT+TGG | - | tig0030427:11841-11860 | Msa1443340:intron | 40.0% | |
| ! | GTGCTAACTGCTTATGCTTT+TGG | - | tig0030427:12348-12367 | Msa1443340:intron | 40.0% |
| GTCAAAGAACTAGGTCAAAG+AGG | + | tig0030427:12404-12423 | None:intergenic | 40.0% | |
| TAACTCATCCTTGTAAGGTG+AGG | + | tig0030427:6613-6632 | None:intergenic | 40.0% | |
| ATGCCATCTCCAAGTAACTA+GGG | + | tig0030427:12995-13014 | None:intergenic | 40.0% | |
| AATGCCATCTCCAAGTAACT+AGG | + | tig0030427:12996-13015 | None:intergenic | 40.0% | |
| ! | GTGATGATGACAAGAGGATT+AGG | - | tig0030427:13071-13090 | Msa1443340:intron | 40.0% |
| AAGCTTCCATCACATGACAT+AGG | - | tig0030427:13146-13165 | Msa1443340:intron | 40.0% | |
| ATGAATTGTGCAACTGGAAC+AGG | - | tig0030427:13328-13347 | Msa1443340:intron | 40.0% | |
| AGTACTTTCATTGGCAGCTA+AGG | + | tig0030427:13401-13420 | None:intergenic | 40.0% | |
| GCTGGAGCGAAATTCAAAAT+GGG | + | tig0030427:13700-13719 | None:intergenic | 40.0% | |
| ! | CATTTTGAATTTCGCTCCAG+CGG | - | tig0030427:13699-13718 | Msa1443340:intron | 40.0% |
| GCATAACACAGGATAAAGAC+GGG | + | tig0030427:13911-13930 | None:intergenic | 40.0% | |
| CAAGGATACTTCCTTTCATC+AGG | - | tig0030427:14123-14142 | Msa1443340:intron | 40.0% | |
| GCAAATGCAAACCTGATGAA+AGG | + | tig0030427:14137-14156 | None:intergenic | 40.0% | |
| CACCTGAATTACAGATTGCT+TGG | - | tig0030427:14251-14270 | Msa1443340:intron | 40.0% | |
| ACCCAAGCAATCTGTAATTC+AGG | + | tig0030427:14256-14275 | None:intergenic | 40.0% | |
| ATTACAGATTGCTTGGGTTC+AGG | - | tig0030427:14258-14277 | Msa1443340:intron | 40.0% | |
| !! | CAGCATTGACAATGTTAACC+GGG | + | tig0030427:14301-14320 | None:intergenic | 40.0% |
| ! | TATCTACACCTTTGGGGAAA+TGG | - | tig0030427:14467-14486 | Msa1443340:intron | 40.0% |
| !! | TTTGTTGTTTCCTCTAGTGG+TGG | - | tig0030427:14499-14518 | Msa1443340:intron | 40.0% |
| !! | TTGTTGTTTCCTCTAGTGGT+GGG | - | tig0030427:14500-14519 | Msa1443340:intron | 40.0% |
| AATAGAGGAAGGCAAAAGAC+CGG | - | tig0030427:14589-14608 | Msa1443340:intron | 40.0% | |
| AGCATGCATAGATTGTTGGT+TGG | - | tig0030427:14974-14993 | Msa1443340:intron | 40.0% | |
| ! | GCATGCATAGATTGTTGGTT+GGG | - | tig0030427:14975-14994 | Msa1443340:intron | 40.0% |
| ! | TGGGGGTTGATTCTATTTCT+AGG | - | tig0030427:15222-15241 | Msa1443340:intron | 40.0% |
| TGTAAGATCACCCAAACTCA+GGG | - | tig0030427:15406-15425 | Msa1443340:intron | 40.0% | |
| ! | CAGACTATCATTTTACCTCC+AGG | - | tig0030427:15563-15582 | Msa1443340:intron | 40.0% |
| TACTCATCAAGACTCTCGTA+CGG | + | tig0030427:15634-15653 | None:intergenic | 40.0% | |
| GAGATTTATCTGCTCCTTGA+TGG | - | tig0030427:16025-16044 | Msa1443340:intron | 40.0% | |
| GAGTGAAAGGTAGCTTGATT+GGG | + | tig0030427:16074-16093 | None:intergenic | 40.0% | |
| AGAGTGAAAGGTAGCTTGAT+TGG | + | tig0030427:16075-16094 | None:intergenic | 40.0% | |
| !! | TCTGTCTCATTTTGAGTGTC+TGG | - | tig0030427:16272-16291 | Msa1443340:intron | 40.0% |
| GAAAGCAAGTGTATGCTTGT+CGG | + | tig0030427:16747-16766 | None:intergenic | 40.0% | |
| GAGAATTGTCGCTAATTGCT+AGG | - | tig0030427:16927-16946 | Msa1443340:intron | 40.0% | |
| GGAATCCCATTTAGCATTTC+TGG | - | tig0030427:16969-16988 | Msa1443340:intron | 40.0% | |
| ! | GTTGATTGCCGAGCAAATTT+TGG | - | tig0030427:16991-17010 | Msa1443340:intron | 40.0% |
| TGGTAGATTCAACGAGCTTA+AGG | - | tig0030427:17011-17030 | Msa1443340:intron | 40.0% | |
| AACTTACCCTTGTAATGCAC+GGG | + | tig0030427:17143-17162 | None:intergenic | 40.0% | |
| TTTCAGTGGTTGGCAACATA+AGG | + | tig0030427:17204-17223 | None:intergenic | 40.0% | |
| ATGTTGCCAACCACTGAAAT+AGG | - | tig0030427:17205-17224 | Msa1443340:intron | 40.0% | |
| !! | AATGGAATAGTGGGTTGGAA+TGG | + | tig0030427:17241-17260 | None:intergenic | 40.0% |
| !! | AATGGAATGGAATAGTGGGT+TGG | + | tig0030427:17246-17265 | None:intergenic | 40.0% |
| TGGTGTTCCGTTGTCAAAAA+TGG | + | tig0030427:17264-17283 | None:intergenic | 40.0% | |
| ! | TATACTCGTAAGAGCATGTC+TGG | + | tig0030427:17356-17375 | None:intergenic | 40.0% |
| CACATGTTTGTAAATAGCCC+CGG | - | tig0030427:17432-17451 | Msa1443340:intron | 40.0% | |
| GTCACAATACCTTCTATCTC+TGG | - | tig0030427:17592-17611 | Msa1443340:intron | 40.0% | |
| !! | TCTTTTTCTAGAGACTGCAG+AGG | - | tig0030427:17630-17649 | Msa1443340:intron | 40.0% |
| !!! | GAGGTTGGTATGAGTGTTTT+TGG | - | tig0030427:17649-17668 | Msa1443340:intron | 40.0% |
| !! | TTTCAGGTTGCATTCTTAGG+GGG | - | tig0030427:17728-17747 | Msa1443340:intron | 40.0% |
| AAATGTTCACCCAACCAATG+TGG | - | tig0030427:17827-17846 | Msa1443340:intron | 40.0% | |
| CTTAGTACTTCCACATTGGT+TGG | + | tig0030427:17840-17859 | None:intergenic | 40.0% | |
| GGTTCTTAGTACTTCCACAT+TGG | + | tig0030427:17844-17863 | None:intergenic | 40.0% | |
| TGTTTCTTGTGGCATGTTTG+TGG | - | tig0030427:17891-17910 | Msa1443340:intron | 40.0% | |
| GTTTCTTGTGGCATGTTTGT+GGG | - | tig0030427:17892-17911 | Msa1443340:intron | 40.0% | |
| TGGCGAAAAATAGGTTTAGG+TGG | - | tig0030427:18027-18046 | Msa1443340:intron | 40.0% | |
| AACAGATTGTGCCCATGATT+GGG | + | tig0030427:18691-18710 | None:intergenic | 40.0% | |
| TATAAGGACAGTTACTTGGG+AGG | + | tig0030427:18929-18948 | None:intergenic | 40.0% | |
| ! | ACAAAGAAGTGGGCTCTAAT+AGG | + | tig0030427:18963-18982 | None:intergenic | 40.0% |
| AGGAACTTGCAACTCAACAA+GGG | + | tig0030427:19001-19020 | None:intergenic | 40.0% | |
| AAGGAACTTGCAACTCAACA+AGG | + | tig0030427:19002-19021 | None:intergenic | 40.0% | |
| ! | TCTAAAACAGAAAGGGAAGG+TGG | + | tig0030427:19182-19201 | None:intergenic | 40.0% |
| !!! | TAGGGATTTTGAGTTAGGGT+TGG | - | tig0030427:19217-19236 | Msa1443340:intron | 40.0% |
| TTGTGAAGTAGAACCAACCT+GGG | + | tig0030427:19278-19297 | None:intergenic | 40.0% | |
| ATTGTGAAGTAGAACCAACC+TGG | + | tig0030427:19279-19298 | None:intergenic | 40.0% | |
| TGGATGAGGGGGAAAATTTA+GGG | + | tig0030427:19450-19469 | None:intergenic | 40.0% | |
| ATGGATGAGGGGGAAAATTT+AGG | + | tig0030427:19451-19470 | None:intergenic | 40.0% | |
| ATGCTGAATTGCATGGATGA+GGG | + | tig0030427:19463-19482 | None:intergenic | 40.0% | |
| AAAGGAGATGCTGAATTGCA+TGG | + | tig0030427:19470-19489 | None:intergenic | 40.0% | |
| ! | TGATACCGTGTTGTGTGTTT+TGG | - | tig0030427:19515-19534 | Msa1443340:intron | 40.0% |
| TTGAAAATCAGAGGTCTTGG+AGG | + | tig0030427:19577-19596 | None:intergenic | 40.0% | |
| GGTTTGAAAATCAGAGGTCT+TGG | + | tig0030427:19580-19599 | None:intergenic | 40.0% | |
| !! | GCTATGACAGTTGATAGAAC+TGG | - | tig0030427:19670-19689 | Msa1443340:intron | 40.0% |
| GAATGGATACAGAGGAAATG+AGG | - | tig0030427:19766-19785 | Msa1443340:intron | 40.0% | |
| ! | TCTTTAGAAAGAAGCCATGG+TGG | + | tig0030427:19966-19985 | None:intergenic | 40.0% |
| GAACTCCAACTGATGTTGAA+GGG | - | tig0030427:20067-20086 | Msa1443340:intron | 40.0% | |
| AGCTTCTTAATTATGGTCCC+AGG | - | tig0030427:20117-20136 | Msa1443340:intron | 40.0% | |
| AGATATGAGAAGGGGCTAAA+AGG | + | tig0030427:20267-20286 | None:intergenic | 40.0% | |
| !!! | ATTTTTGGGTCAAACCTGCA+CGG | + | tig0030427:20479-20498 | None:intergenic | 40.0% |
| TTGACCCAAAAATGAGGACA+CGG | - | tig0030427:20486-20505 | Msa1443340:intron | 40.0% | |
| GCCATATCATGCAAATACAC+AGG | - | tig0030427:20559-20578 | Msa1443340:intron | 40.0% | |
| !! | AAACGCATTACTCTGGAGTT+TGG | + | tig0030427:20701-20720 | None:intergenic | 40.0% |
| CCCAAATAAACGCATTACTC+TGG | + | tig0030427:20708-20727 | None:intergenic | 40.0% | |
| !!! | AGGGTTTTGGATAATGAAGG+AGG | - | tig0030427:20742-20761 | Msa1443340:intron | 40.0% |
| !!! | GGGTTTTGGATAATGAAGGA+GGG | - | tig0030427:20743-20762 | Msa1443340:intron | 40.0% |
| CCCAAATCACGCATTAGTTA+TGG | + | tig0030427:21637-21656 | None:intergenic | 40.0% | |
| !! | GAGTCTGATAGAAGTACTCT+CGG | - | tig0030427:21744-21763 | Msa1443340:intron | 40.0% |
| !! | AGTCTGATAGAAGTACTCTC+GGG | - | tig0030427:21745-21764 | Msa1443340:intron | 40.0% |
| ! | CATCACGGGTCAAACTTTTA+TGG | + | tig0030427:21977-21996 | None:intergenic | 40.0% |
| TGCCAAACAAGAAACATCAC+GGG | + | tig0030427:21991-22010 | None:intergenic | 40.0% | |
| CTGCCAAACAAGAAACATCA+CGG | + | tig0030427:21992-22011 | None:intergenic | 40.0% | |
| AATCAGTGTAAGGCAAGTAG+AGG | + | tig0030427:22031-22050 | None:intergenic | 40.0% | |
| TCTACTTGCCTTACACTGAT+TGG | - | tig0030427:22030-22049 | Msa1443340:intron | 40.0% | |
| ! | AAGCAATTGCCAGATTTTGC+AGG | - | tig0030427:22117-22136 | Msa1443340:intron | 40.0% |
| ! | AGCAATTGCCAGATTTTGCA+GGG | - | tig0030427:22118-22137 | Msa1443340:intron | 40.0% |
| TTCAGCGATGAGAAGAAAGC+TGG | + | tig0030427:4606-4625 | None:intergenic | 45.0% | |
| CGTGAGATTCCTTCTCAGTT+TGG | + | tig0030427:4667-4686 | None:intergenic | 45.0% | |
| TCCCTAAGGTCTATCTCAAC+CGG | + | tig0030427:4972-4991 | None:intergenic | 45.0% | |
| GTTGAGATAGACCTTAGGGA+TGG | - | tig0030427:4972-4991 | Msa1443340:CDS | 45.0% | |
| GAAACTTGGTATCCAGCACA+AGG | - | tig0030427:5113-5132 | Msa1443340:intron | 45.0% | |
| TTCAATTGAACCCTCGCATG+TGG | + | tig0030427:5165-5184 | None:intergenic | 45.0% | |
| GTCTCATGTTCAAATCCTCC+AGG | + | tig0030427:5237-5256 | None:intergenic | 45.0% | |
| CAATTGAAATGAACCCCCAG+GGG | + | tig0030427:5317-5336 | None:intergenic | 45.0% | |
| CCAATTGAAATGAACCCCCA+GGG | + | tig0030427:5318-5337 | None:intergenic | 45.0% | |
| TCCAATTGAAATGAACCCCC+AGG | + | tig0030427:5319-5338 | None:intergenic | 45.0% | |
| !! | TCAAGTTGACAGGTTCTGGA+GGG | + | tig0030427:5703-5722 | None:intergenic | 45.0% |
| !! | TTCAAGTTGACAGGTTCTGG+AGG | + | tig0030427:5704-5723 | None:intergenic | 45.0% |
| AAAGAGGTCCACTCCTTCAT+TGG | + | tig0030427:5746-5765 | None:intergenic | 45.0% | |
| TCAGGAGACTACTAATGCAG+AGG | - | tig0030427:5765-5784 | Msa1443340:intron | 45.0% | |
| AGTGAAACCATCTTCGAGAC+AGG | + | tig0030427:5794-5813 | None:intergenic | 45.0% | |
| TGGGGATGGTTGAGGATAAA+TGG | - | tig0030427:5900-5919 | Msa1443340:intron | 45.0% | |
| TTTCCAGCCCTAATACACAG+CGG | + | tig0030427:6087-6106 | None:intergenic | 45.0% | |
| TGGACCTATGTGGTGAATAG+TGG | - | tig0030427:6420-6439 | Msa1443340:intron | 45.0% | |
| ACAGTATGTGACTCTCATCC+AGG | + | tig0030427:6524-6543 | None:intergenic | 45.0% | |
| GAGACTTACCTCACCTTACA+AGG | - | tig0030427:6602-6621 | Msa1443340:intron | 45.0% | |
| TCCTTCCATATGAGCCACAA+AGG | + | tig0030427:6736-6755 | None:intergenic | 45.0% | |
| GATGGTATTAGAGCCTGAAG+TGG | - | tig0030427:6937-6956 | Msa1443340:intron | 45.0% | |
| GAGGTGCATATCATGATTGG+AGG | - | tig0030427:7016-7035 | Msa1443340:intron | 45.0% | |
| CGATGGACGATTGCATCAAT+GGG | + | tig0030427:7218-7237 | None:intergenic | 45.0% | |
| TGGACCTATGTGGTGAATAG+TGG | - | tig0030427:6420-6439 | Msa1443340:intron | 45.0% | |
| ! | GAAAAAGTTTGGGATGGCTG+AGG | - | tig0030427:7413-7432 | Msa1443340:intron | 45.0% |
| TTTCCAGCCCTAATACACAG+CGG | + | tig0030427:6087-6106 | None:intergenic | 45.0% | |
| !! | AACTTTTTGTTTGGGGGGTG+GGG | + | tig0030427:7881-7900 | None:intergenic | 45.0% |
| !! | GAAACTTTTTGTTTGGGGGG+TGG | + | tig0030427:7883-7902 | None:intergenic | 45.0% |
| CCATGGTAAAGAACATGGTC+CGG | - | tig0030427:7902-7921 | Msa1443340:intron | 45.0% | |
| GTAAAGAACATGGTCCGGAA+TGG | - | tig0030427:7907-7926 | Msa1443340:intron | 45.0% | |
| CAAGTAAACAGCTCGTCACA+AGG | + | tig0030427:7986-8005 | None:intergenic | 45.0% | |
| GTCTTCAACAAGTATGCACC+TGG | - | tig0030427:8380-8399 | Msa1443340:intron | 45.0% | |
| TTCAACAAGTATGCACCTGG+AGG | - | tig0030427:8383-8402 | Msa1443340:intron | 45.0% | |
| !! | ATTTGCAGATGAGGGTGTCA+AGG | - | tig0030427:8425-8444 | Msa1443340:intron | 45.0% |
| ! | AGGGTGTCAAGGTGATTACT+TGG | - | tig0030427:8436-8455 | Msa1443340:intron | 45.0% |
| TGTCAAGGTGATTACTTGGC+AGG | - | tig0030427:8440-8459 | Msa1443340:intron | 45.0% | |
| CAGATGCTCGGATAGAAGTT+AGG | - | tig0030427:8790-8809 | Msa1443340:intron | 45.0% | |
| AGAGAGCAAGGGAAAAACAC+AGG | + | tig0030427:9016-9035 | None:intergenic | 45.0% | |
| ! | GTGTTTTTCCCTTGCTCTCT+AGG | - | tig0030427:9016-9035 | Msa1443340:intron | 45.0% |
| ! | ACTTTTCCAACACACCTCCT+TGG | + | tig0030427:9043-9062 | None:intergenic | 45.0% |
| GCTTTATGCGTTTCCAAACC+AGG | + | tig0030427:9923-9942 | None:intergenic | 45.0% | |
| ACTTTACTCTGCAACTTGGC+AGG | - | tig0030427:9969-9988 | Msa1443340:intron | 45.0% | |
| CTGTATACAACTGGGTCACT+TGG | - | tig0030427:10179-10198 | Msa1443340:CDS | 45.0% | |
| GATTCACCGCTCTCAAAACT+AGG | - | tig0030427:10423-10442 | Msa1443340:intron | 45.0% | |
| TGAGAGCGGTGAATTTGAAC+CGG | + | tig0030427:10534-10553 | None:intergenic | 45.0% | |
| ATTAGGCAGAATGCATCCTG+GGG | + | tig0030427:10896-10915 | None:intergenic | 45.0% | |
| TCAGTTTCCAGCCAAATACC+AGG | - | tig0030427:11008-11027 | Msa1443340:intron | 45.0% | |
| AACTTGTCCTGGTATTTGGC+TGG | + | tig0030427:11018-11037 | None:intergenic | 45.0% | |
| TTACAGAGGGATGTGGGAAA+GGG | + | tig0030427:11523-11542 | None:intergenic | 45.0% | |
| ATTACAGAGGGATGTGGGAA+AGG | + | tig0030427:11524-11543 | None:intergenic | 45.0% | |
| TTGCACTCCTCTATGATGCA+TGG | + | tig0030427:11667-11686 | None:intergenic | 45.0% | |
| ! | CTGCAAGAGATAGTTGGTCT+TGG | - | tig0030427:11847-11866 | Msa1443340:intron | 45.0% |
| GTTAAATAGAGGGAGGGAGA+AGG | + | tig0030427:12028-12047 | None:intergenic | 45.0% | |
| GCATCACCAGCAAAGAAGAA+TGG | + | tig0030427:12292-12311 | None:intergenic | 45.0% | |
| GAGACTTACCTCACCTTACA+AGG | - | tig0030427:6602-6621 | Msa1443340:intron | 45.0% | |
| TCCTTCCATATGAGCCACAA+AGG | + | tig0030427:6736-6755 | None:intergenic | 45.0% | |
| GTACCCTAGTTACTTGGAGA+TGG | - | tig0030427:12989-13008 | Msa1443340:CDS | 45.0% | |
| AGATGGCATTATTGCCTTGC+TGG | - | tig0030427:13006-13025 | Msa1443340:CDS | 45.0% | |
| TTGTCATCATCACCAAGCGT+TGG | + | tig0030427:13064-13083 | None:intergenic | 45.0% | |
| AAGAGGATTAGGAGATCCAG+TGG | - | tig0030427:13082-13101 | Msa1443340:intron | 45.0% | |
| !! | GCTGCCAATGAAAGTACTCT+TGG | - | tig0030427:13403-13422 | Msa1443340:intron | 45.0% |
| ! | ACTCAATGGTTGGTTCCATC+AGG | + | tig0030427:13462-13481 | None:intergenic | 45.0% |
| CGCTGGAGCGAAATTCAAAA+TGG | + | tig0030427:13701-13720 | None:intergenic | 45.0% | |
| GATAAAGACGGGAGAAAGCA+GGG | + | tig0030427:13900-13919 | None:intergenic | 45.0% | |
| TTGGGTTCAGGCTGTATGAA+GGG | - | tig0030427:14270-14289 | Msa1443340:intron | 45.0% | |
| ATAGAGGAAGGCAAAAGACC+GGG | - | tig0030427:14590-14609 | Msa1443340:intron | 45.0% | |
| TGACATCAACTAAGATCGCC+CGG | + | tig0030427:14611-14630 | None:intergenic | 45.0% | |
| ! | TGTATGCATGTATGGGCTGT+AGG | - | tig0030427:15012-15031 | Msa1443340:CDS | 45.0% |
| GTGTAAGATCACCCAAACTC+AGG | - | tig0030427:15405-15424 | Msa1443340:intron | 45.0% | |
| !! | CTTAGTTCTGCCCTGAGTTT+GGG | + | tig0030427:15419-15438 | None:intergenic | 45.0% |
| !! | ACTTAGTTCTGCCCTGAGTT+TGG | + | tig0030427:15420-15439 | None:intergenic | 45.0% |
| ACTCATCAAGACTCTCGTAC+GGG | + | tig0030427:15633-15652 | None:intergenic | 45.0% | |
| CATAAGCATCTACGACACTC+AGG | + | tig0030427:15657-15676 | None:intergenic | 45.0% | |
| ACTACTCTCGTCCATATCAC+AGG | - | tig0030427:15798-15817 | Msa1443340:intron | 45.0% | |
| CTACTCTCGTCCATATCACA+GGG | - | tig0030427:15799-15818 | Msa1443340:intron | 45.0% | |
| AGCTTGATTGGGACCTAAAC+TGG | + | tig0030427:16063-16082 | None:intergenic | 45.0% | |
| ATTTCAGAGCGTGCTTCGAA+CGG | - | tig0030427:16198-16217 | Msa1443340:intron | 45.0% | |
| GTCAAGCTTGCAATCTCTCT+TGG | - | tig0030427:16242-16261 | Msa1443340:intron | 45.0% | |
| ACATCCTTAATATGGCGACG+AGG | - | tig0030427:16493-16512 | Msa1443340:intron | 45.0% | |
| AGTACCTCGTCGCCATATTA+AGG | + | tig0030427:16500-16519 | None:intergenic | 45.0% | |
| GCATCCACCGAATGAAAAGT+TGG | + | tig0030427:16644-16663 | None:intergenic | 45.0% | |
| TGAGCAGGAGTGGTCATATT+AGG | - | tig0030427:16718-16737 | Msa1443340:intron | 45.0% | |
| GAGCAGGAGTGGTCATATTA+GGG | - | tig0030427:16719-16738 | Msa1443340:intron | 45.0% | |
| !! | TAAGGATGATGATGGGCAAG+TGG | - | tig0030427:16809-16828 | Msa1443340:intron | 45.0% |
| AGTATCTCGCTTTGTGCACA+TGG | - | tig0030427:16839-16858 | Msa1443340:intron | 45.0% | |
| GGTAGATTATGGAACGGAGA+TGG | - | tig0030427:16948-16967 | Msa1443340:intron | 45.0% | |
| GACTTCGCTAAATGTGACAC+AGG | + | tig0030427:17575-17594 | None:intergenic | 45.0% | |
| TGTCTCTGACCAGAGATAGA+AGG | + | tig0030427:17604-17623 | None:intergenic | 45.0% | |
| ! | TTTCTAGAGACTGCAGAGGT+TGG | - | tig0030427:17634-17653 | Msa1443340:intron | 45.0% |
| ! | GGCTTGGTTTCTCATGTAGA+TGG | - | tig0030427:17749-17768 | Msa1443340:intron | 45.0% |
| TCAGGAATTGGCTGTTTGCA+TGG | - | tig0030427:17782-17801 | Msa1443340:intron | 45.0% | |
| AGTAAGGAGAGTCGATCAGA+TGG | - | tig0030427:18085-18104 | Msa1443340:intron | 45.0% | |
| AGTCAAATCACTAGAGGCAG+AGG | - | tig0030427:18113-18132 | Msa1443340:intron | 45.0% | |
| ! | AAGCCTTTTCCCACTAAGTG+GGG | + | tig0030427:18253-18272 | None:intergenic | 45.0% |
| ! | CAAGCCTTTTCCCACTAAGT+GGG | + | tig0030427:18254-18273 | None:intergenic | 45.0% |
| ! | GAATCGGCCATTGTCTTTTC+GGG | + | tig0030427:18573-18592 | None:intergenic | 45.0% |
| ! | CGAATCGGCCATTGTCTTTT+CGG | + | tig0030427:18574-18593 | None:intergenic | 45.0% |
| !! | TGGCCGATTCGTGTTAACAA+TGG | - | tig0030427:18583-18602 | Msa1443340:CDS | 45.0% |
| AAAAGTCTCATGAGTCGCTG+CGG | + | tig0030427:18623-18642 | None:intergenic | 45.0% | |
| TCAGCAGCTTTCCCAATCAT+GGG | - | tig0030427:18677-18696 | Msa1443340:intron | 45.0% | |
| GAACAGATTGTGCCCATGAT+TGG | + | tig0030427:18692-18711 | None:intergenic | 45.0% | |
| ACTCAACAAGGGGGATATCT+TGG | + | tig0030427:18990-19009 | None:intergenic | 45.0% | |
| GAACTTGCAACTCAACAAGG+GGG | + | tig0030427:18999-19018 | None:intergenic | 45.0% | |
| GGAACTTGCAACTCAACAAG+GGG | + | tig0030427:19000-19019 | None:intergenic | 45.0% | |
| ATGCTCAAAGAGTCGCTGAA+AGG | + | tig0030427:19021-19040 | None:intergenic | 45.0% | |
| TTGAACTCAGGACCACTCAA+AGG | + | tig0030427:19141-19160 | None:intergenic | 45.0% | |
| AAAACAGAAAGGGAAGGTGG+CGG | + | tig0030427:19179-19198 | None:intergenic | 45.0% | |
| !! | GGGTTGGTTGAAACTTCTCA+AGG | - | tig0030427:19233-19252 | Msa1443340:intron | 45.0% |
| TTCTCAGGGGACAATGCATT+TGG | + | tig0030427:19410-19429 | None:intergenic | 45.0% | |
| AATGCATTGTCCCCTGAGAA+TGG | - | tig0030427:19410-19429 | Msa1443340:intron | 45.0% | |
| TGCTGAATTGCATGGATGAG+GGG | + | tig0030427:19462-19481 | None:intergenic | 45.0% | |
| GATGCTGAATTGCATGGATG+AGG | + | tig0030427:19464-19483 | None:intergenic | 45.0% | |
| ACAACACGGTATCACAGTAC+AGG | + | tig0030427:19509-19528 | None:intergenic | 45.0% | |
| AAATCAGAGGTCTTGGAGGA+AGG | + | tig0030427:19573-19592 | None:intergenic | 45.0% | |
| TTACGACAGTGAGATGGAGA+AGG | - | tig0030427:19791-19810 | Msa1443340:intron | 45.0% | |
| ! | TCGCACTTTTCTTTTCCGAG+AGG | - | tig0030427:19842-19861 | Msa1443340:intron | 45.0% |
| !! | GTTGTTTTGCTCGATCATGC+AGG | - | tig0030427:20039-20058 | Msa1443340:intron | 45.0% |
| CGAACTCCAACTGATGTTGA+AGG | - | tig0030427:20066-20085 | Msa1443340:intron | 45.0% | |
| ACTAGCCCTTCAACATCAGT+TGG | + | tig0030427:20075-20094 | None:intergenic | 45.0% | |
| GGAGACCTCCCTTAAAAAAG+AGG | + | tig0030427:20190-20209 | None:intergenic | 45.0% | |
| GAAGTAGGTAACTGGTACAC+TGG | + | tig0030427:20331-20350 | None:intergenic | 45.0% | |
| CATTGATCAGCTCCCAATCA+TGG | - | tig0030427:20367-20386 | Msa1443340:intron | 45.0% | |
| ATGAATTGGAAATCCCGTGC+AGG | - | tig0030427:20462-20481 | Msa1443340:intron | 45.0% | |
| !!! | TTTTTGGGTCAAACCTGCAC+GGG | + | tig0030427:20478-20497 | None:intergenic | 45.0% |
| GCAGGTTTGACCCAAAAATG+AGG | - | tig0030427:20480-20499 | Msa1443340:intron | 45.0% | |
| ATACAACATAAGGCAAGGCG+AGG | + | tig0030427:20590-20609 | None:intergenic | 45.0% | |
| TCATTGCCTGGTATCTGGAA+AGG | + | tig0030427:21233-21252 | None:intergenic | 45.0% | |
| ACATGTCATTGCCTGGTATC+TGG | + | tig0030427:21238-21257 | None:intergenic | 45.0% | |
| ! | GAACTTACTTTGTGCCGTTC+AGG | - | tig0030427:21319-21338 | Msa1443340:CDS | 45.0% |
| CTGAGAAGGTTCTTCCTGAA+CGG | + | tig0030427:21336-21355 | None:intergenic | 45.0% | |
| CATACTGGAGATACCTGAGA+AGG | + | tig0030427:21350-21369 | None:intergenic | 45.0% | |
| CTTCTCAGGTATCTCCAGTA+TGG | - | tig0030427:21348-21367 | Msa1443340:CDS | 45.0% | |
| GACCCGTGATGTTTCTTGTT+TGG | - | tig0030427:21986-22005 | Msa1443340:intron | 45.0% | |
| TGGCTGTTCCAATCAGTGTA+AGG | + | tig0030427:22041-22060 | None:intergenic | 45.0% | |
| TTGGGCACTCAAACATGACT+TGG | + | tig0030427:22061-22080 | None:intergenic | 45.0% | |
| ! | CAAGTTGAATGGTTGACTGG+AGG | + | tig0030427:22092-22111 | None:intergenic | 45.0% |
| ! | GCAATTGCCAGATTTTGCAG+GGG | - | tig0030427:22119-22138 | Msa1443340:intron | 45.0% |
| !!! | TTAATTATCAAATATTTTTA+AGG | - | tig0030427:6198-6217 | Msa1443340:intron | 5.0% |
| !!! | TTAATTATCAAATATTTTTA+AGG | - | tig0030427:6198-6217 | Msa1443340:intron | 5.0% |
| TTGCGATATGAACCTGTGGG+AGG | + | tig0030427:4742-4761 | None:intergenic | 50.0% | |
| ! | TGCCGGTTGAGATAGACCTT+AGG | - | tig0030427:4967-4986 | Msa1443340:CDS | 50.0% |
| GCCGGTTGAGATAGACCTTA+GGG | - | tig0030427:4968-4987 | Msa1443340:CDS | 50.0% | |
| ATTGAACCCTCGCATGTGGA+TGG | + | tig0030427:5161-5180 | None:intergenic | 50.0% | |
| CCCTGGGGGTTCATTTCAAT+TGG | - | tig0030427:5315-5334 | Msa1443340:intron | 50.0% | |
| TGCTGGTGATCCACCAATGA+AGG | - | tig0030427:5730-5749 | Msa1443340:CDS | 50.0% | |
| GTGATCCACCAATGAAGGAG+TGG | - | tig0030427:5735-5754 | Msa1443340:CDS | 50.0% | |
| TGAAGGAGTGGACCTCTTTC+AGG | - | tig0030427:5747-5766 | Msa1443340:CDS | 50.0% | |
| GAGGTTTCCTGTCTCGAAGA+TGG | - | tig0030427:5784-5803 | Msa1443340:intron | 50.0% | |
| GTAGTATTTGGGGATGGCTG+AGG | - | tig0030427:5922-5941 | Msa1443340:intron | 50.0% | |
| AGGGTCAACCGCTGTGTATT+AGG | - | tig0030427:6076-6095 | Msa1443340:intron | 50.0% | |
| GGGTCAACCGCTGTGTATTA+GGG | - | tig0030427:6077-6096 | Msa1443340:intron | 50.0% | |
| GCTTGCCTTTGTGGCTCATA+TGG | - | tig0030427:6728-6747 | Msa1443340:intron | 50.0% | |
| GCCTTTGTGGCTCATATGGA+AGG | - | tig0030427:6732-6751 | Msa1443340:intron | 50.0% | |
| GGTATTAGAGCCTGAAGTGG+AGG | - | tig0030427:6940-6959 | Msa1443340:intron | 50.0% | |
| ! | CTGAAGTGGAGGAAGAGTGT+GGG | - | tig0030427:6951-6970 | Msa1443340:intron | 50.0% |
| GCATATCATGATTGGAGGCG+AGG | - | tig0030427:7021-7040 | Msa1443340:intron | 50.0% | |
| GAAATGGGGTCTCAGTCTCT+AGG | - | tig0030427:7132-7151 | Msa1443340:intron | 50.0% | |
| GCGATGGACGATTGCATCAA+TGG | + | tig0030427:7219-7238 | None:intergenic | 50.0% | |
| TCCATCGCTCTGCTTCATCA+GGG | - | tig0030427:7231-7250 | Msa1443340:intron | 50.0% | |
| AGGGTCAACCGCTGTGTATT+AGG | - | tig0030427:6076-6095 | Msa1443340:intron | 50.0% | |
| GGGTCAACCGCTGTGTATTA+GGG | - | tig0030427:6077-6096 | Msa1443340:intron | 50.0% | |
| !! | ACTTTTTGTTTGGGGGGTGG+GGG | + | tig0030427:7880-7899 | None:intergenic | 50.0% |
| CCGGACCATGTTCTTTACCA+TGG | + | tig0030427:7905-7924 | None:intergenic | 50.0% | |
| ! | GTGGATCATCTAGTTCCTCC+AGG | + | tig0030427:8401-8420 | None:intergenic | 50.0% |
| TCCTTGGACCTAGAGAGCAA+GGG | + | tig0030427:9027-9046 | None:intergenic | 50.0% | |
| TGACCAGGAAGCTGACCTAA+GGG | + | tig0030427:9106-9125 | None:intergenic | 50.0% | |
| TTGACCAGGAAGCTGACCTA+AGG | + | tig0030427:9107-9126 | None:intergenic | 50.0% | |
| ! | GCAGGTTGCTAAGCTTTTGG+TGG | - | tig0030427:9827-9846 | Msa1443340:intron | 50.0% |
| ACATGATTGGGGACCTGGTT+TGG | - | tig0030427:9907-9926 | Msa1443340:intron | 50.0% | |
| TACAGAGGGATGTGGGAAAG+GGG | + | tig0030427:11522-11541 | None:intergenic | 50.0% | |
| TGTCGTTGGCAAGTACTCTG+AGG | - | tig0030427:11547-11566 | Msa1443340:intron | 50.0% | |
| GTCGTTGGCAAGTACTCTGA+GGG | - | tig0030427:11548-11567 | Msa1443340:intron | 50.0% | |
| ! | TTGGCAAGTACTCTGAGGGT+AGG | - | tig0030427:11552-11571 | Msa1443340:intron | 50.0% |
| ! | TGGCAAGTACTCTGAGGGTA+GGG | - | tig0030427:11553-11572 | Msa1443340:intron | 50.0% |
| ! | CGAGGGCCTTCATTTGAGTT+AGG | + | tig0030427:11765-11784 | None:intergenic | 50.0% |
| CAGCTAGTATGCGATGCAGA+TGG | + | tig0030427:11822-11841 | None:intergenic | 50.0% | |
| GCTTGCCTTTGTGGCTCATA+TGG | - | tig0030427:6728-6747 | Msa1443340:intron | 50.0% | |
| GCCTTTGTGGCTCATATGGA+AGG | - | tig0030427:6732-6751 | Msa1443340:intron | 50.0% | |
| !! | AAGCGTTGGAGACTGTCTGT+AGG | + | tig0030427:13050-13069 | None:intergenic | 50.0% |
| TACAGACAGTCTCCAACGCT+TGG | - | tig0030427:13049-13068 | Msa1443340:intron | 50.0% | |
| !! | CGCTTGGTGATGATGACAAG+AGG | - | tig0030427:13065-13084 | Msa1443340:intron | 50.0% |
| AGCATTCTCTCTTGAACCGC+TGG | + | tig0030427:13718-13737 | None:intergenic | 50.0% | |
| AGCGGTTCAAGAGAGAATGC+TGG | - | tig0030427:13717-13736 | Msa1443340:intron | 50.0% | |
| GGATAAAGACGGGAGAAAGC+AGG | + | tig0030427:13901-13920 | None:intergenic | 50.0% | |
| CTTGGGTTCAGGCTGTATGA+AGG | - | tig0030427:14269-14288 | Msa1443340:intron | 50.0% | |
| GCTGTATGAAGGGAAATGCC+CGG | - | tig0030427:14280-14299 | Msa1443340:intron | 50.0% | |
| GATGCACCCGTGCATTACAA+GGG | - | tig0030427:17134-17153 | Msa1443340:CDS | 50.0% | |
| ! | CTTTTCCCACTAAGTGGGGT+CGG | + | tig0030427:18249-18268 | None:intergenic | 50.0% |
| ! | CCAAGCCTTTTCCCACTAAG+TGG | + | tig0030427:18255-18274 | None:intergenic | 50.0% |
| CCACTTAGTGGGAAAAGGCT+TGG | - | tig0030427:18252-18271 | Msa1443340:intron | 50.0% | |
| !! | GAAAGGCATTGCATCCACCT+AGG | - | tig0030427:18539-18558 | Msa1443340:CDS | 50.0% |
| GGAGGAACCCGAAAAGACAA+TGG | - | tig0030427:18563-18582 | Msa1443340:CDS | 50.0% | |
| AAAGTCTCATGAGTCGCTGC+GGG | + | tig0030427:18622-18641 | None:intergenic | 50.0% | |
| CTCAGCAGCTTTCCCAATCA+TGG | - | tig0030427:18676-18695 | Msa1443340:intron | 50.0% | |
| ! | CAAGGGAGAGTGTGGTCAAA+GGG | + | tig0030427:18741-18760 | None:intergenic | 50.0% |
| ! | ACAAGGGAGAGTGTGGTCAA+AGG | + | tig0030427:18742-18761 | None:intergenic | 50.0% |
| AAGTCATGTCCATGCTGCTG+TGG | - | tig0030427:18889-18908 | Msa1443340:intron | 50.0% | |
| AGTCATGTCCATGCTGCTGT+GGG | - | tig0030427:18890-18909 | Msa1443340:intron | 50.0% | |
| AACTCAGGACCACTCAAAGG+AGG | + | tig0030427:19138-19157 | None:intergenic | 50.0% | |
| ! | ACTTCTCAAGGAGTGCACCA+AGG | - | tig0030427:19245-19264 | Msa1443340:intron | 50.0% |
| TGCACCAAGGAATTCATCCC+AGG | - | tig0030427:19258-19277 | Msa1443340:intron | 50.0% | |
| CCAACCTGGGATGAATTCCT+TGG | + | tig0030427:19265-19284 | None:intergenic | 50.0% | |
| CCAAGGAATTCATCCCAGGT+TGG | - | tig0030427:19262-19281 | Msa1443340:intron | 50.0% | |
| CAGGGGACAATGCATTTGGA+TGG | + | tig0030427:19406-19425 | None:intergenic | 50.0% | |
| GCTGAATTGCATGGATGAGG+GGG | + | tig0030427:19461-19480 | None:intergenic | 50.0% | |
| GAGGGATTACGACAGTGAGA+TGG | - | tig0030427:19785-19804 | Msa1443340:intron | 50.0% | |
| !! | GTGCACTGATTATGCCACCA+TGG | - | tig0030427:19949-19968 | Msa1443340:intron | 50.0% |
| CGTTCAGGAAGAACCTTCTC+AGG | - | tig0030427:21334-21353 | Msa1443340:CDS | 50.0% | |
| GCTAAATTGAAGGCTGCTCG+AGG | - | tig0030427:21427-21446 | Msa1443340:intron | 50.0% | |
| !! | TGACTGGAGGCATCTGTCTT+GGG | + | tig0030427:22079-22098 | None:intergenic | 50.0% |
| !! | TTGACTGGAGGCATCTGTCT+TGG | + | tig0030427:22080-22099 | None:intergenic | 50.0% |
| GAAATGGCCCCTGCAAAATC+TGG | + | tig0030427:22129-22148 | None:intergenic | 50.0% | |
| AGGAGAGAGGGGATGAGCAT+CGG | + | tig0030427:4708-4727 | None:intergenic | 55.0% | |
| AGTGAAGGTGGAGGAGAGAG+GGG | + | tig0030427:4719-4738 | None:intergenic | 55.0% | |
| GAGTGAAGGTGGAGGAGAGA+GGG | + | tig0030427:4720-4739 | None:intergenic | 55.0% | |
| TGAACCTGTGGGAGGAGTGA+AGG | + | tig0030427:4734-4753 | None:intergenic | 55.0% | |
| GACCAACCATCCACATGCGA+GGG | - | tig0030427:5152-5171 | Msa1443340:intron | 55.0% | |
| AACCCTCGCATGTGGATGGT+TGG | + | tig0030427:5157-5176 | None:intergenic | 55.0% | |
| TGAAATGAACCCCCAGGGGT+TGG | + | tig0030427:5313-5332 | None:intergenic | 55.0% | |
| GAGGTCCACTCCTTCATTGG+TGG | + | tig0030427:5743-5762 | None:intergenic | 55.0% | |
| AGCGGTTGACCCTAACTCAC+TGG | + | tig0030427:6069-6088 | None:intergenic | 55.0% | |
| CAACCGCTGTGTATTAGGGC+TGG | - | tig0030427:6081-6100 | Msa1443340:intron | 55.0% | |
| TGGGCAGTGGTATCTCTTCC+TGG | - | tig0030427:6503-6522 | Msa1443340:CDS | 55.0% | |
| CCACACTCTTCCTCCACTTC+AGG | + | tig0030427:6953-6972 | None:intergenic | 55.0% | |
| CCTGAAGTGGAGGAAGAGTG+TGG | - | tig0030427:6950-6969 | Msa1443340:intron | 55.0% | |
| AGGCGAGGAGAGAGAAGAGA+AGG | - | tig0030427:7036-7055 | Msa1443340:intron | 55.0% | |
| GTCCATCGCTCTGCTTCATC+AGG | - | tig0030427:7230-7249 | Msa1443340:intron | 55.0% | |
| ACCCTGATGAAGCAGAGCGA+TGG | + | tig0030427:7235-7254 | None:intergenic | 55.0% | |
| AGCGGTTGACCCTAACTCAC+TGG | + | tig0030427:6069-6088 | None:intergenic | 55.0% | |
| CAACCGCTGTGTATTAGGGC+TGG | - | tig0030427:6081-6100 | Msa1443340:intron | 55.0% | |
| GTCATCAGCAAGCCAAGACC+GGG | + | tig0030427:8505-8524 | None:intergenic | 55.0% | |
| GGTCATCAGCAAGCCAAGAC+CGG | + | tig0030427:8506-8525 | None:intergenic | 55.0% | |
| TCCCTTGCTCTCTAGGTCCA+AGG | - | tig0030427:9023-9042 | Msa1443340:intron | 55.0% | |
| CTCCTTGGACCTAGAGAGCA+AGG | + | tig0030427:9028-9047 | None:intergenic | 55.0% | |
| CTTGCTCTCTAGGTCCAAGG+AGG | - | tig0030427:9026-9045 | Msa1443340:intron | 55.0% | |
| ! | CTAGGTCCAAGGAGGTGTGT+TGG | - | tig0030427:9034-9053 | Msa1443340:intron | 55.0% |
| TCACCCTTAGGTCAGCTTCC+TGG | - | tig0030427:9100-9119 | Msa1443340:intron | 55.0% | |
| CATGGACATGATTGGGGACC+TGG | - | tig0030427:9902-9921 | Msa1443340:intron | 55.0% | |
| ACAGAGGGATGTGGGAAAGG+GGG | + | tig0030427:11521-11540 | None:intergenic | 55.0% | |
| GGAGAAGGAACTCACATGCG+TGG | + | tig0030427:12013-12032 | None:intergenic | 55.0% | |
| TCGAGCAGAAAACGCCAGCA+AGG | + | tig0030427:13023-13042 | None:intergenic | 55.0% | |
| GTTGGAGACTGTCTGTAGGC+TGG | + | tig0030427:13046-13065 | None:intergenic | 55.0% | |
| CGGCAATATGCAGATGCCAC+TGG | + | tig0030427:13101-13120 | None:intergenic | 55.0% | |
| ! | CCTCTAGTGGTGGGAAAGCA+CGG | - | tig0030427:14509-14528 | Msa1443340:intron | 55.0% |
| GGATGCACCCGTGCATTACA+AGG | - | tig0030427:17133-17152 | Msa1443340:CDS | 55.0% | |
| GGTTGCATTCTTAGGGGGCT+TGG | - | tig0030427:17733-17752 | Msa1443340:intron | 55.0% | |
| TTGTAGCCGACCCCACTTAG+TGG | - | tig0030427:18240-18259 | Msa1443340:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | tig0030427:18241-18260 | Msa1443340:intron | 55.0% | |
| CGACCCCACTTAGTGGGAAA+AGG | - | tig0030427:18247-18266 | Msa1443340:intron | 55.0% | |
| ! | AGGCATTGCATCCACCTAGG+TGG | - | tig0030427:18542-18561 | Msa1443340:CDS | 55.0% |
| CATTGCATCCACCTAGGTGG+AGG | - | tig0030427:18545-18564 | Msa1443340:CDS | 55.0% | |
| !!! | CTTTTCGGGTTCCTCCACCT+AGG | + | tig0030427:18559-18578 | None:intergenic | 55.0% |
| GCACAATCTGTTCCCGACGA+AGG | - | tig0030427:18699-18718 | Msa1443340:intron | 55.0% | |
| GAGTGTGGTCAAAGGGCTGT+GGG | + | tig0030427:18734-18753 | None:intergenic | 55.0% | |
| AGAGTGTGGTCAAAGGGCTG+TGG | + | tig0030427:18735-18754 | None:intergenic | 55.0% | |
| TAGGGCTACAAGGGAGAGTG+TGG | + | tig0030427:18749-18768 | None:intergenic | 55.0% | |
| TCCATGCTGCTGTGGGTTCT+TGG | - | tig0030427:18897-18916 | Msa1443340:intron | 55.0% | |
| ACCAAGAACCCACAGCAGCA+TGG | + | tig0030427:18901-18920 | None:intergenic | 55.0% | |
| CTGCTGTGGGTTCTTGGTTC+AGG | - | tig0030427:18903-18922 | Msa1443340:intron | 55.0% | |
| ! | GTGGGGCTAGGCAGGAATTT+TGG | + | tig0030427:19551-19570 | None:intergenic | 55.0% |
| AGAGGTCTTGGAGGAAGGTG+GGG | + | tig0030427:19568-19587 | None:intergenic | 55.0% | |
| CAGAGGTCTTGGAGGAAGGT+GGG | + | tig0030427:19569-19588 | None:intergenic | 55.0% | |
| TCAGAGGTCTTGGAGGAAGG+TGG | + | tig0030427:19570-19589 | None:intergenic | 55.0% | |
| GAAGGCTGCTCGAGGAAGTA+TGG | - | tig0030427:21435-21454 | Msa1443340:intron | 55.0% | |
| GGAGTGAAGGTGGAGGAGAG+AGG | + | tig0030427:4721-4740 | None:intergenic | 60.0% | |
| TGTGGGAGGAGTGAAGGTGG+AGG | + | tig0030427:4728-4747 | None:intergenic | 60.0% | |
| TCCACCTTCACTCCTCCCAC+AGG | - | tig0030427:4727-4746 | Msa1443340:three_prime_UTR | 60.0% | |
| ACCTGTGGGAGGAGTGAAGG+TGG | + | tig0030427:4731-4750 | None:intergenic | 60.0% | |
| GGACCAACCATCCACATGCG+AGG | - | tig0030427:5151-5170 | Msa1443340:intron | 60.0% | |
| TGTAGGCTGCGGACAAAGGC+TGG | + | tig0030427:5282-5301 | None:intergenic | 60.0% | |
| GTGGTGTAGGCTGCGGACAA+AGG | + | tig0030427:5286-5305 | None:intergenic | 60.0% | |
| TGTCCGCAGCCTACACCACT+CGG | - | tig0030427:5287-5306 | Msa1443340:intron | 60.0% | |
| CCGTGCTTTCCCACCACTAG+AGG | + | tig0030427:14512-14531 | None:intergenic | 60.0% | |
| ! | TGGTGGGAAAGCACGGTGTC+AGG | - | tig0030427:14516-14535 | Msa1443340:intron | 60.0% |
| ! | GGTGGGAAAGCACGGTGTCA+GGG | - | tig0030427:14517-14536 | Msa1443340:intron | 60.0% |
| ! | GTGGGAAAGCACGGTGTCAG+GGG | - | tig0030427:14518-14537 | Msa1443340:intron | 60.0% |
| TCAGAGCGTGCTTCGAACGG+AGG | - | tig0030427:16201-16220 | Msa1443340:intron | 60.0% | |
| ! | TTCGGGTTCCTCCACCTAGG+TGG | + | tig0030427:18556-18575 | None:intergenic | 60.0% |
| GGGAAAGCTGCTGAGTTCGC+TGG | + | tig0030427:18671-18690 | None:intergenic | 60.0% | |
| ! | TGGGCGATCTTGGCCTTCGT+CGG | + | tig0030427:18715-18734 | None:intergenic | 60.0% |
| CAAAGGGCTGTGGGCGATCT+TGG | + | tig0030427:18725-18744 | None:intergenic | 60.0% | |
| ! | GGCGATCCCGAGTATCGCAA+AGG | + | tig0030427:19117-19136 | None:intergenic | 60.0% |
| TCGGGATCGCCTCCTTTGAG+TGG | - | tig0030427:19126-19145 | Msa1443340:intron | 60.0% | |
| TCTTGGAGGAAGGTGGGGCT+AGG | + | tig0030427:19563-19582 | None:intergenic | 60.0% | |
| !! | TGAGCATCGGCGCGTAGACG+AGG | + | tig0030427:4695-4714 | None:intergenic | 65.0% |
| GCTGCGGACAAAGGCTGGAG+AGG | + | tig0030427:5277-5296 | None:intergenic | 65.0% | |
| TGGCCGAGTGGTGTAGGCTG+CGG | + | tig0030427:5293-5312 | None:intergenic | 65.0% | |
| !! | AGGGGTTGGCCGAGTGGTGT+AGG | + | tig0030427:5299-5318 | None:intergenic | 65.0% |
| TACACCACTCGGCCAACCCC+TGG | - | tig0030427:5298-5317 | Msa1443340:intron | 65.0% | |
| ACACCACTCGGCCAACCCCT+GGG | - | tig0030427:5299-5318 | Msa1443340:intron | 65.0% | |
| TGTTTGGGGGGTGGGGGTTG+AGG | + | tig0030427:7874-7893 | None:intergenic | 65.0% | |
| ! | GGGCGATCTTGGCCTTCGTC+GGG | + | tig0030427:18714-18733 | None:intergenic | 65.0% |
| CACCACTCGGCCAACCCCTG+GGG | - | tig0030427:5300-5319 | Msa1443340:intron | 70.0% | |
| ACCACTCGGCCAACCCCTGG+GGG | - | tig0030427:5301-5320 | Msa1443340:intron | 70.0% | |
| GGAGGAAGGTGGGGCTAGGC+AGG | + | tig0030427:19559-19578 | None:intergenic | 70.0% | |
| !! | ACCCCCAGGGGTTGGCCGAG+TGG | + | tig0030427:5305-5324 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0030427 | gene | 4570 | 22446 | 4570 | ID=Msa1443340;Name=Msa1443340 |
| tig0030427 | mRNA | 4570 | 22446 | 4570 | ID=Msa1443340-mRNA-1;Parent=Msa1443340;Name=Msa1443340-mRNA-1;_AED=0.09;_eAED=0.09;_QI=71|1|1|1|1|1|23|285|905 |
| tig0030427 | exon | 4570 | 5004 | 4570 | ID=Msa1443340-mRNA-1:exon:13884;Parent=Msa1443340-mRNA-1 |
| tig0030427 | exon | 5521 | 5577 | 5521 | ID=Msa1443340-mRNA-1:exon:13883;Parent=Msa1443340-mRNA-1 |
| tig0030427 | exon | 5661 | 5777 | 5661 | ID=Msa1443340-mRNA-1:exon:13882;Parent=Msa1443340-mRNA-1 |
| tig0030427 | exon | 6436 | 6532 | 6436 | ID=Msa1443340-mRNA-1:exon:13881;Parent=Msa1443340-mRNA-1 |
| tig0030427 | exon | 6628 | 6694 | 6628 | ID=Msa1443340-mRNA-1:exon:13880;Parent=Msa1443340-mRNA-1 |
| tig0030427 | exon | 6878 | 6955 | 6878 | ID=Msa1443340-mRNA-1:exon:13879;Parent=Msa1443340-mRNA-1 |
| tig0030427 | exon | 9213 | 9282 | 9213 | ID=Msa1443340-mRNA-1:exon:13878;Parent=Msa1443340-mRNA-1 |
| tig0030427 | exon | 9365 | 9523 | 9365 | ID=Msa1443340-mRNA-1:exon:13877;Parent=Msa1443340-mRNA-1 |
| tig0030427 | exon | 9984 | 10067 | 9984 | ID=Msa1443340-mRNA-1:exon:13876;Parent=Msa1443340-mRNA-1 |
| tig0030427 | exon | 10156 | 10291 | 10156 | ID=Msa1443340-mRNA-1:exon:13875;Parent=Msa1443340-mRNA-1 |
| tig0030427 | exon | 10502 | 10584 | 10502 | ID=Msa1443340-mRNA-1:exon:13874;Parent=Msa1443340-mRNA-1 |
| tig0030427 | exon | 10705 | 10848 | 10705 | ID=Msa1443340-mRNA-1:exon:13873;Parent=Msa1443340-mRNA-1 |
| tig0030427 | exon | 11314 | 11394 | 11314 | ID=Msa1443340-mRNA-1:exon:13872;Parent=Msa1443340-mRNA-1 |
| tig0030427 | exon | 12676 | 12765 | 12676 | ID=Msa1443340-mRNA-1:exon:13871;Parent=Msa1443340-mRNA-1 |
| tig0030427 | exon | 12872 | 13057 | 12872 | ID=Msa1443340-mRNA-1:exon:13870;Parent=Msa1443340-mRNA-1 |
| tig0030427 | exon | 13500 | 13666 | 13500 | ID=Msa1443340-mRNA-1:exon:13869;Parent=Msa1443340-mRNA-1 |
| tig0030427 | exon | 13849 | 14018 | 13849 | ID=Msa1443340-mRNA-1:exon:13868;Parent=Msa1443340-mRNA-1 |
| tig0030427 | exon | 14999 | 15095 | 14999 | ID=Msa1443340-mRNA-1:exon:13867;Parent=Msa1443340-mRNA-1 |
| tig0030427 | exon | 17026 | 17185 | 17026 | ID=Msa1443340-mRNA-1:exon:13866;Parent=Msa1443340-mRNA-1 |
| tig0030427 | exon | 18462 | 18646 | 18462 | ID=Msa1443340-mRNA-1:exon:13865;Parent=Msa1443340-mRNA-1 |
| tig0030427 | exon | 18741 | 18771 | 18741 | ID=Msa1443340-mRNA-1:exon:13864;Parent=Msa1443340-mRNA-1 |
| tig0030427 | exon | 21196 | 21396 | 21196 | ID=Msa1443340-mRNA-1:exon:13863;Parent=Msa1443340-mRNA-1 |
| tig0030427 | exon | 22268 | 22446 | 22268 | ID=Msa1443340-mRNA-1:exon:13862;Parent=Msa1443340-mRNA-1 |
| tig0030427 | five_prime_UTR | 22376 | 22446 | 22376 | ID=Msa1443340-mRNA-1:five_prime_utr;Parent=Msa1443340-mRNA-1 |
| tig0030427 | CDS | 22268 | 22375 | 22268 | ID=Msa1443340-mRNA-1:cds;Parent=Msa1443340-mRNA-1 |
| tig0030427 | CDS | 21196 | 21396 | 21196 | ID=Msa1443340-mRNA-1:cds;Parent=Msa1443340-mRNA-1 |
| tig0030427 | CDS | 18741 | 18771 | 18741 | ID=Msa1443340-mRNA-1:cds;Parent=Msa1443340-mRNA-1 |
| tig0030427 | CDS | 18462 | 18646 | 18462 | ID=Msa1443340-mRNA-1:cds;Parent=Msa1443340-mRNA-1 |
| tig0030427 | CDS | 17026 | 17185 | 17026 | ID=Msa1443340-mRNA-1:cds;Parent=Msa1443340-mRNA-1 |
| tig0030427 | CDS | 14999 | 15095 | 14999 | ID=Msa1443340-mRNA-1:cds;Parent=Msa1443340-mRNA-1 |
| tig0030427 | CDS | 13849 | 14018 | 13849 | ID=Msa1443340-mRNA-1:cds;Parent=Msa1443340-mRNA-1 |
| tig0030427 | CDS | 13500 | 13666 | 13500 | ID=Msa1443340-mRNA-1:cds;Parent=Msa1443340-mRNA-1 |
| tig0030427 | CDS | 12872 | 13057 | 12872 | ID=Msa1443340-mRNA-1:cds;Parent=Msa1443340-mRNA-1 |
| tig0030427 | CDS | 12676 | 12765 | 12676 | ID=Msa1443340-mRNA-1:cds;Parent=Msa1443340-mRNA-1 |
| tig0030427 | CDS | 11314 | 11394 | 11314 | ID=Msa1443340-mRNA-1:cds;Parent=Msa1443340-mRNA-1 |
| tig0030427 | CDS | 10705 | 10848 | 10705 | ID=Msa1443340-mRNA-1:cds;Parent=Msa1443340-mRNA-1 |
| tig0030427 | CDS | 10502 | 10584 | 10502 | ID=Msa1443340-mRNA-1:cds;Parent=Msa1443340-mRNA-1 |
| tig0030427 | CDS | 10156 | 10291 | 10156 | ID=Msa1443340-mRNA-1:cds;Parent=Msa1443340-mRNA-1 |
| tig0030427 | CDS | 9984 | 10067 | 9984 | ID=Msa1443340-mRNA-1:cds;Parent=Msa1443340-mRNA-1 |
| tig0030427 | CDS | 9365 | 9523 | 9365 | ID=Msa1443340-mRNA-1:cds;Parent=Msa1443340-mRNA-1 |
| tig0030427 | CDS | 9213 | 9282 | 9213 | ID=Msa1443340-mRNA-1:cds;Parent=Msa1443340-mRNA-1 |
| tig0030427 | CDS | 6878 | 6955 | 6878 | ID=Msa1443340-mRNA-1:cds;Parent=Msa1443340-mRNA-1 |
| tig0030427 | CDS | 6628 | 6694 | 6628 | ID=Msa1443340-mRNA-1:cds;Parent=Msa1443340-mRNA-1 |
| tig0030427 | CDS | 6436 | 6532 | 6436 | ID=Msa1443340-mRNA-1:cds;Parent=Msa1443340-mRNA-1 |
| tig0030427 | CDS | 5661 | 5777 | 5661 | ID=Msa1443340-mRNA-1:cds;Parent=Msa1443340-mRNA-1 |
| tig0030427 | CDS | 5521 | 5577 | 5521 | ID=Msa1443340-mRNA-1:cds;Parent=Msa1443340-mRNA-1 |
| tig0030427 | CDS | 4855 | 5004 | 4855 | ID=Msa1443340-mRNA-1:cds;Parent=Msa1443340-mRNA-1 |
| tig0030427 | three_prime_UTR | 4570 | 4854 | 4570 | ID=Msa1443340-mRNA-1:three_prime_utr;Parent=Msa1443340-mRNA-1 |
| Gene Sequence |
| Protein sequence |