AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0162720

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0162720 MtrunA17_Chr1g0177161 96.906 905 28 0 1 905 1 905 0.0 1808
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0162720 AT1G50730.3 49.277 899 441 10 1 886 3 899 0.0 859
Msa0162720 AT1G50730.2 49.388 899 439 11 1 886 3 898 0.0 857
Msa0162720 AT1G50730.1 46.696 923 443 14 1 886 3 913 0.0 777

Find 205 sgRNAs with CRISPR-Local

Find 1186 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAATCCCATTTAGCATTTC+TGG 0.117078 1_4:+40018357 Msa0162720:CDS
CACCTTTATAGATAACTTTA+AGG 0.152516 1_4:-40009921 None:intergenic
TCTTTCCCTTAATAAATAAA+AGG 0.176363 1_4:-40023651 None:intergenic
ATCAATGTATATAAGTTATT+AGG 0.206017 1_4:-40021739 None:intergenic
TGAAGGAGTGGACCTCTTTC+AGG 0.210115 1_4:+40007133 Msa0162720:CDS
TGAGCAGGAGTGGTCATATT+AGG 0.211051 1_4:+40018106 Msa0162720:intron
TCATTCAAGTTGACAGGTTC+TGG 0.230651 1_4:-40007090 None:intergenic
TATAACTGGTTCAGCAAAAT+TGG 0.232752 1_4:+40013355 Msa0162720:CDS
AATCAACCAGAAATGCTAAA+TGG 0.248125 1_4:-40018363 None:intergenic
TGCATTACATCTAAGATTTC+AGG 0.252312 1_4:-40017829 None:intergenic
CCAGTTATAGCAAGTTTCTT+TGG 0.257426 1_4:-40013341 None:intergenic
GTAGATGGATTGATTGATTC+AGG 0.272167 1_4:+40019152 Msa0162720:CDS
AGAACTTGTTTCTTTGTCTA+AGG 0.279416 1_4:+40022674 Msa0162720:CDS
CTAAATTCATGTTACAATAT+AGG 0.282539 1_4:-40023789 None:intergenic
GTTGATTGCCGAGCAAATTT+TGG 0.286667 1_4:+40018379 Msa0162720:CDS
GGCAATGACATGTTATACTA+TGG 0.294510 1_4:+40022633 Msa0162720:CDS
TAATATGGAATTTACGAATA+AGG 0.295478 1_4:+40018179 Msa0162720:CDS
TTTGCAGGTTGCTAAGCTTT+TGG 0.296869 1_4:+40011210 Msa0162720:intron
ATGATTTGTGTTGGTTTAGT+TGG 0.300449 1_4:+40023546 Msa0162720:exon
GCTAATTGCTAGGTAGATTA+TGG 0.302052 1_4:+40018325 Msa0162720:intron
AGTACCTCGTCGCCATATTA+AGG 0.311618 1_4:-40017885 None:intergenic
TGCATATTGCCGTCTATATA+TGG 0.317803 1_4:+40014496 Msa0162720:CDS
TGTTCGTGAACTTCTAGTTT+AGG 0.323360 1_4:+40023708 Msa0162720:three_prime_UTR
TTATTAATTCCTCCTCTTAG+TGG 0.326229 1_4:-40007048 None:intergenic
TCAGGCTCTACATGATAATA+TGG 0.329316 1_4:+40018164 Msa0162720:CDS
GGCTTGGTTTCTCATGTAGA+TGG 0.332714 1_4:+40019137 Msa0162720:CDS
AACTTCTAGTTTAGGTTTGA+TGG 0.333819 1_4:+40023716 Msa0162720:three_prime_UTR
ATCCTTAAAGTTATCTATAA+AGG 0.336969 1_4:+40009919 Msa0162720:CDS
ACCTGTGTATTTGCATGATA+TGG 0.338887 1_4:-40021948 None:intergenic
TTGTAACATGAATTTAGTTT+TGG 0.342116 1_4:+40023795 Msa0162720:three_prime_UTR
GGAGTGAAGGTGGAGGAGAG+AGG 0.342206 1_4:-40006104 None:intergenic
TTGAATTGCTAAAGAATTGC+TGG 0.343695 1_4:-40018897 None:intergenic
CAAAGAAAACTGACCATGAT+TGG 0.345934 1_4:-40021768 None:intergenic
TGGTAGATTCAACGAGCTTA+AGG 0.346944 1_4:+40018399 Msa0162720:CDS
ACATGATTGGGGACCTGGTT+TGG 0.347250 1_4:+40011293 Msa0162720:CDS
CCAAAGAAACTTGCTATAAC+TGG 0.347511 1_4:+40013341 Msa0162720:CDS
AAGAACCATCATTGGTATCT+AGG 0.353149 1_4:+40023670 Msa0162720:three_prime_UTR
TGAGACTGTTTCATGTGTTT+CGG 0.356103 1_4:+40015403 Msa0162720:CDS
TGAATACTAAATTTCATTGA+TGG 0.362502 1_4:+40006008 Msa0162720:exon
ATTACAGATTGCTTGGGTTC+AGG 0.363256 1_4:+40015646 Msa0162720:CDS
ACCCAAGCAATCTGTAATTC+AGG 0.365020 1_4:-40015641 None:intergenic
GAACTTACTTTGTGCCGTTC+AGG 0.366933 1_4:+40022707 Msa0162720:CDS
CGTGAGATTCCTTCTCAGTT+TGG 0.375524 1_4:-40006050 None:intergenic
CTTTCCCTTAATAAATAAAA+GGG 0.376553 1_4:-40023650 None:intergenic
GAAATGGCCCCTGCAAAATC+TGG 0.379974 1_4:-40023514 None:intergenic
TCAATGTATATAAGTTATTA+GGG 0.389929 1_4:-40021738 None:intergenic
CAAGGATACTTCCTTTCATC+AGG 0.391447 1_4:+40015511 Msa0162720:CDS
GAAGGCTGCTCGAGGAAGTA+TGG 0.391500 1_4:+40022823 Msa0162720:intron
GGATTGATTGATTCAGGAAT+TGG 0.393033 1_4:+40019158 Msa0162720:CDS
TCTACTTGCCTTACACTGAT+TGG 0.395945 1_4:+40023418 Msa0162720:CDS
GAGTGAAGGTGGAGGAGAGA+GGG 0.399513 1_4:-40006103 None:intergenic
GTTAACGTTGTTGTCGATGA+TGG 0.401068 1_4:+40007006 Msa0162720:CDS
CACCTGAATTACAGATTGCT+TGG 0.403215 1_4:+40015639 Msa0162720:CDS
AGATGGCATTATTGCCTTGC+TGG 0.403338 1_4:+40014393 Msa0162720:CDS
CTTGCTTTCTGAAATTTCTC+AGG 0.405245 1_4:+40018146 Msa0162720:CDS
CAGATATCATGGACATGATT+GGG 0.406650 1_4:+40011281 Msa0162720:CDS
AAGATGAAATTACCCGGTCT+TGG 0.407882 1_4:+40009876 Msa0162720:CDS
GCTGTGTAGCTTCTTAATTA+TGG 0.411493 1_4:+40021498 Msa0162720:CDS
TAAATTGTACCCTAGTTACT+TGG 0.414897 1_4:+40014370 Msa0162720:intron
GAGCAGGAGTGGTCATATTA+GGG 0.415244 1_4:+40018107 Msa0162720:intron
ACAGCATTGACAATGTTAAC+CGG 0.415866 1_4:-40015687 None:intergenic
GTGATGATGACAAGAGGATT+AGG 0.418005 1_4:+40014458 Msa0162720:CDS
TGACTGGAGGCATCTGTCTT+GGG 0.419073 1_4:-40023464 None:intergenic
CCACTTCTCATTAAAACATC+GGG 0.421304 1_4:-40009634 None:intergenic
TCTATGACAGAATAATCATT+TGG 0.421480 1_4:+40017546 Msa0162720:intron
TTGACTGGAGGCATCTGTCT+TGG 0.422936 1_4:-40023465 None:intergenic
TTAAGGGAAAGAACCATCAT+TGG 0.424093 1_4:+40023662 Msa0162720:three_prime_UTR
AAAGCAGAATTTACTGAAGA+TGG 0.424473 1_4:+40011331 Msa0162720:CDS
ACAGATATCATGGACATGAT+TGG 0.425580 1_4:+40011280 Msa0162720:CDS
GCTGCCAATGAAAGTACTCT+TGG 0.430497 1_4:+40014790 Msa0162720:CDS
CGAACTCCAACTGATGTTGA+AGG 0.438158 1_4:+40021454 Msa0162720:CDS
AAAGAGGTCCACTCCTTCAT+TGG 0.441721 1_4:-40007129 None:intergenic
AGTGAAGGTGGAGGAGAGAG+GGG 0.446868 1_4:-40006102 None:intergenic
TTGTGTTGGTTTAGTTGGAT+TGG 0.451310 1_4:+40023551 Msa0162720:three_prime_UTR
AAATCATACAGAAGTTGAAA+TGG 0.453130 1_4:-40023530 None:intergenic
ATCAACCAGAAATGCTAAAT+GGG 0.453204 1_4:-40018362 None:intergenic
GTGGATCATCTAGTTCCTCC+AGG 0.454277 1_4:-40009784 None:intergenic
ACCTGAATTACAGATTGCTT+GGG 0.456091 1_4:+40015640 Msa0162720:CDS
CATGGACATGATTGGGGACC+TGG 0.456577 1_4:+40011288 Msa0162720:CDS
TTATTAGGGAAGTAGGTAAC+TGG 0.458592 1_4:-40021724 None:intergenic
ATTTCCAAGAGTACTTTCAT+TGG 0.458684 1_4:-40014794 None:intergenic
TATATTTAGCGGGTTATCTC+AGG 0.459289 1_4:+40014882 Msa0162720:CDS
CTCAAACTAATTAGTCCCAT+TGG 0.459688 1_4:-40023613 None:intergenic
TGTCCTTGTCACAGATATCA+TGG 0.463735 1_4:+40011270 Msa0162720:CDS
ACTCAATGGTTGGTTCCATC+AGG 0.465265 1_4:-40014846 None:intergenic
GTCAAGCTTGCAATCTCTCT+TGG 0.467641 1_4:+40017630 Msa0162720:CDS
AACTTCTGTATGATTTGTGT+TGG 0.469380 1_4:+40023537 Msa0162720:exon
AGTACTTTCATTGGCAGCTA+AGG 0.469412 1_4:-40014785 None:intergenic
TGTTAAATTCAATGAGATGA+AGG 0.471505 1_4:-40015490 None:intergenic
GTCACAATACCTTCTATCTC+TGG 0.475427 1_4:+40018980 Msa0162720:CDS
ACTTTACTCTGCAACTTGGC+AGG 0.475735 1_4:+40011355 Msa0162720:CDS
GAAAGCAAGTGTATGCTTGT+CGG 0.479025 1_4:-40018132 None:intergenic
TGTCAAGGTGATTACTTGGC+AGG 0.479086 1_4:+40009826 Msa0162720:CDS
TTTACGAATAAGGATGATGA+TGG 0.479887 1_4:+40018189 Msa0162720:CDS
TGTCTCTGACCAGAGATAGA+AGG 0.481574 1_4:-40018989 None:intergenic
GAAGTAGGTAACTGGTACAC+TGG 0.482207 1_4:-40021716 None:intergenic
GCAACTTCATTCAAGTTGAC+AGG 0.483928 1_4:-40007096 None:intergenic
GAGGTTTCCTGTCTCGAAGA+TGG 0.486763 1_4:+40007170 Msa0162720:CDS
GTCAACTTGAATGAAGTTGC+TGG 0.488279 1_4:+40007099 Msa0162720:CDS
TTATGAAGTGTATATTTAGC+GGG 0.492703 1_4:+40014872 Msa0162720:CDS
TTCATAATATACTCAATGGT+TGG 0.494321 1_4:-40014856 None:intergenic
TTGCTTGTTTACAAGTTGAA+TGG 0.494479 1_4:-40023488 None:intergenic
GCTTTATGCGTTTCCAAACC+AGG 0.495883 1_4:-40011306 None:intergenic
AGTGAAACCATCTTCGAGAC+AGG 0.496228 1_4:-40007177 None:intergenic
TGCTGGTGATCCACCAATGA+AGG 0.497736 1_4:+40007116 Msa0162720:CDS
CTTGGGTTCAGGCTGTATGA+AGG 0.497787 1_4:+40015657 Msa0162720:CDS
AGCTTCTTAATTATGGTCCC+AGG 0.498783 1_4:+40021505 Msa0162720:CDS
CGTTCAGGAAGAACCTTCTC+AGG 0.502086 1_4:+40022722 Msa0162720:CDS
ACTTCTAGTTTAGGTTTGAT+GGG 0.503671 1_4:+40023717 Msa0162720:three_prime_UTR
TCCACCTTCACTCCTCCCAC+AGG 0.504810 1_4:+40006113 Msa0162720:CDS
CATTAGTAGTCTCCTGAAAG+AGG 0.506403 1_4:-40007145 None:intergenic
TCCACTTCTCATTAAAACAT+CGG 0.506577 1_4:-40009635 None:intergenic
TCTTATACTTCAGAATCAAA+TGG 0.510433 1_4:+40017069 Msa0162720:CDS
GGTCATCAGCAAGCCAAGAC+CGG 0.510660 1_4:-40009889 None:intergenic
GCAATGACATGTTATACTAT+GGG 0.512454 1_4:+40022634 Msa0162720:CDS
AATGAAGTTCTATCAGAGCT+TGG 0.513992 1_4:+40015356 Msa0162720:CDS
GACTTCTTTGATCCACTAAG+AGG 0.514107 1_4:+40007036 Msa0162720:CDS
CATTGATCAGCTCCCAATCA+TGG 0.516367 1_4:+40021755 Msa0162720:CDS
GAAATCTTAGATGTAATGCA+TGG 0.516455 1_4:+40017832 Msa0162720:CDS
AAAGAAAACTGACCATGATT+GGG 0.517615 1_4:-40021767 None:intergenic
AGTATCTCGCTTTGTGCACA+TGG 0.517662 1_4:+40018227 Msa0162720:CDS
TTAACGTTGTTGTCGATGAT+GGG 0.518430 1_4:+40007007 Msa0162720:CDS
TGTGTTAGATAAAGTTATGC+AGG 0.525356 1_4:+40015707 Msa0162720:CDS
ATATAAGTTATTAGGGAAGT+AGG 0.529644 1_4:-40021731 None:intergenic
ATAGCAAGTTTCTTTGGCAT+CGG 0.530542 1_4:-40013335 None:intergenic
TGGCTGTTCCAATCAGTGTA+AGG 0.531637 1_4:-40023426 None:intergenic
TGGAACTTTACTCTGCAACT+TGG 0.534295 1_4:+40011351 Msa0162720:CDS
TAGTATAACATGTCATTGCC+TGG 0.536656 1_4:-40022630 None:intergenic
GTTGGAGACTGTCTGTAGGC+TGG 0.537931 1_4:-40014430 None:intergenic
AAAATTGCAAATCAGCCTGA+TGG 0.537953 1_4:+40014831 Msa0162720:CDS
CGGCAATATGCAGATGCCAC+TGG 0.538008 1_4:-40014485 None:intergenic
GAGGTCCACTCCTTCATTGG+TGG 0.538396 1_4:-40007126 None:intergenic
AAAATACCTATGTCATGTGA+TGG 0.538842 1_4:-40014539 None:intergenic
GTACCCTAGTTACTTGGAGA+TGG 0.539367 1_4:+40014376 Msa0162720:intron
ATAATTTCACTAAGATTACA+AGG 0.539570 1_4:-40023745 None:intergenic
TACAGACAGTCTCCAACGCT+TGG 0.539598 1_4:+40014436 Msa0162720:CDS
GGTAGATTATGGAACGGAGA+TGG 0.542644 1_4:+40018336 Msa0162720:intron
ACACTTCATAATATACTCAA+TGG 0.543491 1_4:-40014860 None:intergenic
AGGAATTAATAATGATGCAA+AGG 0.544220 1_4:+40007059 Msa0162720:CDS
AGGGTGTCAAGGTGATTACT+TGG 0.545052 1_4:+40009822 Msa0162720:CDS
TTACAAGTTGAATGGTTGAC+TGG 0.549747 1_4:-40023480 None:intergenic
TGAATCTACCAAAATTTGCT+CGG 0.550291 1_4:-40018387 None:intergenic
TCAGAGCGTGCTTCGAACGG+AGG 0.551881 1_4:+40017589 Msa0162720:CDS
TTCAGCGATGAGAAGAAAGC+TGG 0.552882 1_4:-40005989 None:intergenic
ACTAGCCCTTCAACATCAGT+TGG 0.557730 1_4:-40021460 None:intergenic
GTCATCAGCAAGCCAAGACC+GGG 0.560886 1_4:-40009888 None:intergenic
TTGGGTTCAGGCTGTATGAA+GGG 0.561389 1_4:+40015658 Msa0162720:CDS
TACTCATCAAGACTCTCGTA+CGG 0.563752 1_4:-40017019 None:intergenic
TTTCAGGTTGCATTCTTAGG+GGG 0.564146 1_4:+40019116 Msa0162720:intron
AGGAGAGAGGGGATGAGCAT+CGG 0.564253 1_4:-40006091 None:intergenic
ATTATGAAGTGTATATTTAG+CGG 0.564480 1_4:+40014871 Msa0162720:CDS
ATTTCAGAGCGTGCTTCGAA+CGG 0.567971 1_4:+40017586 Msa0162720:CDS
TTGGGCACTCAAACATGACT+TGG 0.568509 1_4:-40023446 None:intergenic
GCAAATGCAAACCTGATGAA+AGG 0.570852 1_4:-40015522 None:intergenic
TTCAAGTTGACAGGTTCTGG+AGG 0.571677 1_4:-40007087 None:intergenic
TCAGGAATTGGCTGTTTGCA+TGG 0.574052 1_4:+40019170 Msa0162720:CDS
GTCTTCAACAAGTATGCACC+TGG 0.578523 1_4:+40009766 Msa0162720:CDS
AAATCTTAGATGTAATGCAT+GGG 0.583220 1_4:+40017833 Msa0162720:CDS
TTCTTTGATCCACTAAGAGG+AGG 0.591223 1_4:+40007039 Msa0162720:CDS
ATTTGCAGATGAGGGTGTCA+AGG 0.591813 1_4:+40009811 Msa0162720:CDS
GAACTCCAACTGATGTTGAA+GGG 0.594167 1_4:+40021455 Msa0162720:CDS
CACAATGAGCCATATATAGA+CGG 0.595405 1_4:-40014505 None:intergenic
TCATCTCATTGAATTTAACA+AGG 0.595878 1_4:+40015493 Msa0162720:CDS
CAGCATTGACAATGTTAACC+GGG 0.596358 1_4:-40015686 None:intergenic
TGAGCATCGGCGCGTAGACG+AGG 0.597225 1_4:-40006078 None:intergenic
TCAGGAGACTACTAATGCAG+AGG 0.597466 1_4:+40007151 Msa0162720:CDS
ACCTGTGGGAGGAGTGAAGG+TGG 0.599995 1_4:-40006114 None:intergenic
GCTGTATGAAGGGAAATGCC+CGG 0.600517 1_4:+40015668 Msa0162720:CDS
CGCTTGGTGATGATGACAAG+AGG 0.600991 1_4:+40014452 Msa0162720:CDS
AAGCTTCCATCACATGACAT+AGG 0.603180 1_4:+40014533 Msa0162720:CDS
CAAGTTGAATGGTTGACTGG+AGG 0.604538 1_4:-40023477 None:intergenic
TTGTCATCATCACCAAGCGT+TGG 0.606364 1_4:-40014448 None:intergenic
CTGAGAAGGTTCTTCCTGAA+CGG 0.607804 1_4:-40022721 None:intergenic
TGAACCTGTGGGAGGAGTGA+AGG 0.610246 1_4:-40006117 None:intergenic
ACTCATCAAGACTCTCGTAC+GGG 0.612958 1_4:-40017018 None:intergenic
TTACGAATAAGGATGATGAT+GGG 0.616266 1_4:+40018190 Msa0162720:CDS
TGTGACAAGGACAAATAGAG+TGG 0.616862 1_4:-40011260 None:intergenic
TCAAGTTGACAGGTTCTGGA+GGG 0.616999 1_4:-40007086 None:intergenic
TGTGGGAGGAGTGAAGGTGG+AGG 0.618202 1_4:-40006111 None:intergenic
GCTAAATTGAAGGCTGCTCG+AGG 0.618534 1_4:+40022815 Msa0162720:intron
AGATATCATGGACATGATTG+GGG 0.619973 1_4:+40011282 Msa0162720:CDS
TTTCCCTTAATAAATAAAAG+GGG 0.620483 1_4:-40023649 None:intergenic
TAAGGATGATGATGGGCAAG+TGG 0.624712 1_4:+40018197 Msa0162720:CDS
TCGTGATTACCAAACTGAGA+AGG 0.626227 1_4:+40006041 Msa0162720:CDS
AATCAGTGTAAGGCAAGTAG+AGG 0.627995 1_4:-40023416 None:intergenic
CATAAGCATCTACGACACTC+AGG 0.631788 1_4:-40017042 None:intergenic
GTGATCCACCAATGAAGGAG+TGG 0.633179 1_4:+40007121 Msa0162720:CDS
TCGAGCAGAAAACGCCAGCA+AGG 0.636954 1_4:-40014407 None:intergenic
CAATGACATGTTATACTATG+GGG 0.639140 1_4:+40022635 Msa0162720:CDS
GGAGAAGGAACTCACATGCG+TGG 0.643037 1_4:-40013397 None:intergenic
AGCTCAAAGATGAAATTACC+CGG 0.646652 1_4:+40009870 Msa0162720:CDS
CATACTGGAGATACCTGAGA+AGG 0.648838 1_4:-40022735 None:intergenic
TCTTAGTGGATCAAAGAAGT+CGG 0.649749 1_4:-40007034 None:intergenic
GCCATATCATGCAAATACAC+AGG 0.650728 1_4:+40021947 Msa0162720:CDS
GTGACAAGGACAAATAGAGT+GGG 0.650949 1_4:-40011259 None:intergenic
AAGCGTTGGAGACTGTCTGT+AGG 0.656409 1_4:-40014434 None:intergenic
GACTTCGCTAAATGTGACAC+AGG 0.664810 1_4:-40018960 None:intergenic
TTGCTAGGTAGATTATGGAA+CGG 0.665043 1_4:+40018330 Msa0162720:intron
AAGAGGATTAGGAGATCCAG+TGG 0.669624 1_4:+40014469 Msa0162720:CDS
TTGCGATATGAACCTGTGGG+AGG 0.675063 1_4:-40006125 None:intergenic
TGTCCATGATATCTGTGACA+AGG 0.676504 1_4:-40011273 None:intergenic
TTCAACAAGTATGCACCTGG+AGG 0.708301 1_4:+40009769 Msa0162720:CDS
ATAACTTTAAGGATGTTACA+CGG 0.747631 1_4:-40009910 None:intergenic
TAGTAAGATAGAATACAACA+AGG 0.751207 1_4:-40023581 None:intergenic
ACATCCTTAATATGGCGACG+AGG 0.792285 1_4:+40017881 Msa0162720:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATAAATTCTGTAAAATT+TGG + chr1_4:40006223-40006242 Msa0162720:intron 10.0%
!! TATAAATAAATGTTAGTATT+TGG + chr1_4:40007266-40007285 Msa0162720:intron 10.0%
!! ATAAATAAATGTTAGTATTT+GGG + chr1_4:40007267-40007286 Msa0162720:intron 10.0%
!! ATTATTGAATATTATTATGA+AGG + chr1_4:40009415-40009434 Msa0162720:intron 10.0%
!! TTATTGAATATTATTATGAA+GGG + chr1_4:40009416-40009435 Msa0162720:intron 10.0%
!! TAAATTATTAAATACATCAA+AGG - chr1_4:40009948-40009967 None:intergenic 10.0%
!! CTTATTATTAATTAAAAGTT+AGG - chr1_4:40011594-40011613 None:intergenic 10.0%
!!! CTAACTTTTAATTAATAATA+AGG + chr1_4:40011592-40011611 Msa0162720:intron 10.0%
!! AAATATTTATCTGTAAAATT+AGG + chr1_4:40012010-40012029 Msa0162720:intron 10.0%
!! TTGTCAAAAAAATAAAATAA+TGG - chr1_4:40012759-40012778 None:intergenic 10.0%
!!! GAATTTTTAATTTTTTTTTG+TGG + chr1_4:40013530-40013549 Msa0162720:intron 10.0%
!! GTATATTAAAAATTAAAATC+AGG - chr1_4:40016735-40016754 None:intergenic 10.0%
!! TTTATTGAGTTTATATAAAT+AGG - chr1_4:40020186-40020205 None:intergenic 10.0%
!! ATTAAAAAAAAAAACTATCA+AGG + chr1_4:40020215-40020234 Msa0162720:intron 10.0%
!! TAAATAAATGTTAGTATTTG+GGG + chr1_4:40007268-40007287 Msa0162720:intron 15.0%
!!! TATATTTTGTAGGATTATTT+TGG + chr1_4:40007869-40007888 Msa0162720:intron 15.0%
!!! ATATTTTGTAGGATTATTTT+GGG + chr1_4:40007870-40007889 Msa0162720:intron 15.0%
!!! ATGTACAAAACTTTAAAAAA+GGG - chr1_4:40009334-40009353 None:intergenic 15.0%
!!! AAATTTGTTTTAGAATACAA+CGG - chr1_4:40009544-40009563 None:intergenic 15.0%
!! AAAATCAATGTAAAAGATAT+TGG - chr1_4:40009678-40009697 None:intergenic 15.0%
!! AACTAAATGACATTAAATAA+AGG - chr1_4:40009712-40009731 None:intergenic 15.0%
!!! AAAAATATATTCTAGCTAAA+TGG - chr1_4:40010061-40010080 None:intergenic 15.0%
!!! TATTTTTGATTAAATAGAAG+TGG + chr1_4:40011063-40011082 Msa0162720:intron 15.0%
!!! TTTAAGTTTAAATTTTGTAC+CGG + chr1_4:40011634-40011653 Msa0162720:intron 15.0%
!! TTGAAACTAAAAAAACAAAA+AGG - chr1_4:40011666-40011685 None:intergenic 15.0%
!!! TTGTTTTTTTAGTTTCAAAT+TGG + chr1_4:40011668-40011687 Msa0162720:intron 15.0%
!!! ATTTCTTTATTTAAGTGAAA+TGG + chr1_4:40012703-40012722 Msa0162720:intron 15.0%
!!! TTTCTTTATTTAAGTGAAAT+GGG + chr1_4:40012704-40012723 Msa0162720:intron 15.0%
!! TGTTATATAAAAACAATTTG+TGG + chr1_4:40013708-40013727 Msa0162720:intron 15.0%
!! GTTATATAAAAACAATTTGT+GGG + chr1_4:40013709-40013728 Msa0162720:intron 15.0%
!!! TATTTCCACATATTTTAAAA+GGG - chr1_4:40014619-40014638 None:intergenic 15.0%
!!! TTATTTCCACATATTTTAAA+AGG - chr1_4:40014620-40014639 None:intergenic 15.0%
!! AAAAAAAAACAAAGATGTAT+GGG - chr1_4:40014991-40015010 None:intergenic 15.0%
!! AAAAAAAAAACAAAGATGTA+TGG - chr1_4:40014992-40015011 None:intergenic 15.0%
!! TTCATATAACAAAGATATAT+GGG - chr1_4:40015034-40015053 None:intergenic 15.0%
!!! TCAATCAATTTTATTGTTTT+AGG + chr1_4:40016091-40016110 Msa0162720:intron 15.0%
!! AAGAAAAAAAAAATAGAAAG+AGG + chr1_4:40016116-40016135 Msa0162720:intron 15.0%
!! TTTACTACATATTAAGTTAA+AGG + chr1_4:40016451-40016470 Msa0162720:intron 15.0%
!!! TATTTTTAGTGATTTTATTC+TGG + chr1_4:40016903-40016922 Msa0162720:intron 15.0%
!!! ATTTTTAGTGATTTTATTCT+GGG + chr1_4:40016904-40016923 Msa0162720:intron 15.0%
!! ATTTGATATATTCTCTAATT+TGG + chr1_4:40016975-40016994 Msa0162720:intron 15.0%
!!! TTTTATATTGTGTGAATAAA+AGG + chr1_4:40017128-40017147 Msa0162720:intron 15.0%
!! TTTATATTGTGTGAATAAAA+GGG + chr1_4:40017129-40017148 Msa0162720:intron 15.0%
!!! ATTACCTTTTTTTATTTATG+TGG + chr1_4:40017244-40017263 Msa0162720:intron 15.0%
!!! AGATAAATCTCAATATTTTA+TGG - chr1_4:40017404-40017423 None:intergenic 15.0%
!! TAAATTCCTTGAAAAAAATT+CGG + chr1_4:40018714-40018733 Msa0162720:intron 15.0%
!! ATTTATTAAGTCGTATATAT+AGG - chr1_4:40019864-40019883 None:intergenic 15.0%
!! AAACATTATTTCAAATTGAA+AGG - chr1_4:40020759-40020778 None:intergenic 15.0%
!! CATATATTAAATATAACAAG+AGG - chr1_4:40021114-40021133 None:intergenic 15.0%
!! TCAATGTATATAAGTTATTA+GGG - chr1_4:40021741-40021760 None:intergenic 15.0%
!! ATCAATGTATATAAGTTATT+AGG - chr1_4:40021742-40021761 None:intergenic 15.0%
!! TATTGAAATGTAAAGAAATA+TGG + chr1_4:40022357-40022376 Msa0162720:intron 15.0%
!! TAAATTACTTTATTCAAACA+AGG - chr1_4:40022520-40022539 None:intergenic 15.0%
!!! ACAATAAATTTTGTAAATGA+AGG - chr1_4:40022547-40022566 None:intergenic 15.0%
!! TGAATACTAAATTTCATTGA+TGG + chr1_4:40006008-40006027 Msa0162720:exon 20.0%
!! TTTATGACTTATTGATATCT+CGG + chr1_4:40006802-40006821 Msa0162720:intron 20.0%
!!! ATCAAATATTTTTAAGGAAG+AGG + chr1_4:40007590-40007609 Msa0162720:intron 20.0%
!! ATTTGAACTTAGTTAGAAAT+TGG + chr1_4:40007786-40007805 Msa0162720:intron 20.0%
!!! TCTAAAAAAGTGTCATAATT+GGG + chr1_4:40007966-40007985 Msa0162720:intron 20.0%
!! ATTTGAACTTAGTTAGAAAT+TGG + chr1_4:40007786-40007805 Msa0162720:intron 20.0%
!!! ATCAAATATTTTTAAGGAAG+AGG + chr1_4:40007590-40007609 Msa0162720:intron 20.0%
!!! TGTACAAAACTTTAAAAAAG+GGG - chr1_4:40009333-40009352 None:intergenic 20.0%
!!! CATGTACAAAACTTTAAAAA+AGG - chr1_4:40009335-40009354 None:intergenic 20.0%
!! CTAATCTATAAGAATATCAA+AGG - chr1_4:40009487-40009506 None:intergenic 20.0%
!! TTAATTAAAGTAGAAACTGA+AGG - chr1_4:40009585-40009604 None:intergenic 20.0%
!! ATCCTTAAAGTTATCTATAA+AGG + chr1_4:40009919-40009938 Msa0162720:CDS 20.0%
!! GTGATTTCAAAAAACAAAAA+AGG - chr1_4:40010004-40010023 None:intergenic 20.0%
!!! CATTTAATTTATTAACTCGA+AGG + chr1_4:40010093-40010112 Msa0162720:intron 20.0%
!! TTAGTAAAATGCCATATAAA+AGG - chr1_4:40010149-40010168 None:intergenic 20.0%
!! ATAAATAGTGCTTATGAATA+AGG + chr1_4:40010267-40010286 Msa0162720:intron 20.0%
!! CATGAGTTTATTCATAATAT+GGG - chr1_4:40010551-40010570 None:intergenic 20.0%
!! TCATGAGTTTATTCATAATA+TGG - chr1_4:40010552-40010571 None:intergenic 20.0%
!! GAAAATGATTATTTATTTGC+AGG + chr1_4:40011195-40011214 Msa0162720:intron 20.0%
!!! ATTTTATGACTAAAAGGAAT+AGG - chr1_4:40011719-40011738 None:intergenic 20.0%
!!! GCATATATTTTATGACTAAA+AGG - chr1_4:40011725-40011744 None:intergenic 20.0%
!! TATTTCATCAACAAAGTAAT+CGG - chr1_4:40011879-40011898 None:intergenic 20.0%
!! TATTTCATCAACAAAGTAAT+CGG - chr1_4:40011879-40011898 None:intergenic 20.0%
!! TGTAAAATTAGGATTGAATT+GGG + chr1_4:40012021-40012040 Msa0162720:intron 20.0%
!! AAATGTATGTAAGTTATGTT+TGG + chr1_4:40012058-40012077 Msa0162720:intron 20.0%
!! ACAATTTGATACAACAAAAA+AGG + chr1_4:40012165-40012184 Msa0162720:intron 20.0%
!!! GAGTTTTTTTAGTTTCAAAT+TGG - chr1_4:40012223-40012242 None:intergenic 20.0%
!! TTGAAACTAAAAAAACTCAA+AGG + chr1_4:40012225-40012244 Msa0162720:intron 20.0%
!! TCTGGATATACATTATTATT+AGG - chr1_4:40012300-40012319 None:intergenic 20.0%
!! ATTGTTAATACCTATAAATG+CGG + chr1_4:40012601-40012620 Msa0162720:intron 20.0%
!!! AAAAGTTTAAGTTGTATTCA+TGG + chr1_4:40012651-40012670 Msa0162720:intron 20.0%
!! TACCAAAAATACAAATACAT+TGG + chr1_4:40012983-40013002 Msa0162720:intron 20.0%
!!! TACCAATGTATTTGTATTTT+TGG - chr1_4:40012988-40013007 None:intergenic 20.0%
!! ACAACAATAAGTTAAATAGA+GGG - chr1_4:40013425-40013444 None:intergenic 20.0%
!! TACAACAATAAGTTAAATAG+AGG - chr1_4:40013426-40013445 None:intergenic 20.0%
!!! TTTTTATATAACACAAAGCT+GGG - chr1_4:40013701-40013720 None:intergenic 20.0%
!!! TCTAAAAAAGTGTCATAATT+GGG + chr1_4:40007966-40007985 Msa0162720:intron 20.0%
!!! AATTAACTTCAAACATGTTT+TGG + chr1_4:40014146-40014165 Msa0162720:intron 20.0%
!! TGTCAATATTGCTTAAAATT+TGG + chr1_4:40014227-40014246 Msa0162720:intron 20.0%
!!! AGAGTTTGTTAAAAATCATT+TGG + chr1_4:40014285-40014304 Msa0162720:intron 20.0%
!!! GAGTTTGTTAAAAATCATTT+GGG + chr1_4:40014286-40014305 Msa0162720:intron 20.0%
!! ATTATGAAGTGTATATTTAG+CGG + chr1_4:40014871-40014890 Msa0162720:CDS 20.0%
!! AAAAAAAACAAAGATGTATG+GGG - chr1_4:40014990-40015009 None:intergenic 20.0%
!! CTTCATATAACAAAGATATA+TGG - chr1_4:40015035-40015054 None:intergenic 20.0%
!!! TAAAAGTGCATATTAGAATA+TGG - chr1_4:40015598-40015617 None:intergenic 20.0%
!! ACTTTCTAACAATATATTTC+TGG + chr1_4:40015765-40015784 Msa0162720:intron 20.0%
!!! TTATTTTTCGTTAGAATGTA+AGG + chr1_4:40015941-40015960 Msa0162720:intron 20.0%
!!! TTTTTTTTTGTTCTTCTAAG+AGG + chr1_4:40016022-40016041 Msa0162720:intron 20.0%
!!! TATTTCACTAGTTATTTTTC+AGG - chr1_4:40016332-40016351 None:intergenic 20.0%
!!! CAATTATGACACAATTTTAT+GGG - chr1_4:40016592-40016611 None:intergenic 20.0%
!! CATAAAATTGTGTCATAATT+GGG + chr1_4:40016591-40016610 Msa0162720:intron 20.0%
!! ATAAAATTGTGTCATAATTG+GGG + chr1_4:40016592-40016611 Msa0162720:intron 20.0%
!! TCTGAACAAATTCTTTATTA+TGG - chr1_4:40016841-40016860 None:intergenic 20.0%
!! CTCAACAAAAAAGATAAAAA+TGG - chr1_4:40017163-40017182 None:intergenic 20.0%
!!! CTATATCTTGTTACTTTTTT+GGG - chr1_4:40017335-40017354 None:intergenic 20.0%
!!! TCTATATCTTGTTACTTTTT+TGG - chr1_4:40017336-40017355 None:intergenic 20.0%
!! GATTAATTATTATCCAGTTT+AGG + chr1_4:40017435-40017454 Msa0162720:intron 20.0%
!! ATATATGTACTAGAAAATCA+AGG - chr1_4:40017973-40017992 None:intergenic 20.0%
!!! TATATGATACACGTATTTTA+AGG + chr1_4:40018063-40018082 Msa0162720:intron 20.0%
!! TAATATGGAATTTACGAATA+AGG + chr1_4:40018179-40018198 Msa0162720:CDS 20.0%
!! GAATTTAATGAAATTGGAAT+GGG - chr1_4:40018701-40018720 None:intergenic 20.0%
!! TTCAAGGAATTTAATGAAAT+TGG - chr1_4:40018707-40018726 None:intergenic 20.0%
!!! AAAAATTGTTTGTAGAGTTT+TGG + chr1_4:40018777-40018796 Msa0162720:intron 20.0%
!!! TATATCACTAACTATTTTAC+CGG - chr1_4:40018842-40018861 None:intergenic 20.0%
!!! GATTTATAGTTTGAATTTTC+AGG + chr1_4:40019100-40019119 Msa0162720:intron 20.0%
!!! TAGTATTCATTTTCAAACAT+TGG - chr1_4:40019253-40019272 None:intergenic 20.0%
!! TTCAATGCTAAATTCTTATA+TGG + chr1_4:40019309-40019328 Msa0162720:intron 20.0%
!!! TTTTTTTTTTCTTTCTACCT+AGG + chr1_4:40019728-40019747 Msa0162720:intron 20.0%
!! ATTATTAGATAACAGACATA+GGG - chr1_4:40019820-40019839 None:intergenic 20.0%
!! AATTATTAGATAACAGACAT+AGG - chr1_4:40019821-40019840 None:intergenic 20.0%
!! CTGTTATCTAATAATTTGAA+AGG + chr1_4:40019825-40019844 Msa0162720:intron 20.0%
!! AAATCATTAGATAATAGACT+AGG - chr1_4:40019907-40019926 None:intergenic 20.0%
!! CTATTATCTAATGATTTGAA+AGG + chr1_4:40019910-40019929 Msa0162720:intron 20.0%
!! TAGAATCTAAGTCTTTAATA+GGG - chr1_4:40020155-40020174 None:intergenic 20.0%
!! ATAGAATCTAAGTCTTTAAT+AGG - chr1_4:40020156-40020175 None:intergenic 20.0%
!! ATAGGAGTTATACAAATATA+AGG - chr1_4:40020333-40020352 None:intergenic 20.0%
!! AATGTATGCATAAAATCTTT+AGG - chr1_4:40020733-40020752 None:intergenic 20.0%
!! AAACAACAATTAACTATTTC+TGG - chr1_4:40021414-40021433 None:intergenic 20.0%
!! AGTTGAAATAATATTAACCT+GGG - chr1_4:40021525-40021544 None:intergenic 20.0%
!! AAGTTGAAATAATATTAACC+TGG - chr1_4:40021526-40021545 None:intergenic 20.0%
!!! ACTTAAAAACCTCTTTTTTA+AGG + chr1_4:40021566-40021585 Msa0162720:intron 20.0%
!!! CTTAAAAACCTCTTTTTTAA+GGG + chr1_4:40021567-40021586 Msa0162720:intron 20.0%
!! TCTATTACAGATTATAATAG+TGG - chr1_4:40021599-40021618 None:intergenic 20.0%
!!! AATGTTTGTTTTGTTCATTT+TGG - chr1_4:40022018-40022037 None:intergenic 20.0%
!! TATCGTATTTAGTAGAAATA+GGG - chr1_4:40022299-40022318 None:intergenic 20.0%
!! ATATCGTATTTAGTAGAAAT+AGG - chr1_4:40022300-40022319 None:intergenic 20.0%
!! TTTCTACTAAATACGATATA+TGG + chr1_4:40022301-40022320 Msa0162720:intron 20.0%
!! GATTTATTATGCTAAATTGA+AGG + chr1_4:40022805-40022824 Msa0162720:intron 20.0%
!!! AATCTTATTTATTAGTGATG+TGG + chr1_4:40022937-40022956 Msa0162720:intron 20.0%
!!! ATCTTATTTATTAGTGATGT+GGG + chr1_4:40022938-40022957 Msa0162720:intron 20.0%
!! TTTCCCTTAATAAATAAAAG+GGG - chr1_4:40023652-40023671 None:intergenic 20.0%
!! CTTTCCCTTAATAAATAAAA+GGG - chr1_4:40023653-40023672 None:intergenic 20.0%
!! TCTTTCCCTTAATAAATAAA+AGG - chr1_4:40023654-40023673 None:intergenic 20.0%
!! ATAATTTCACTAAGATTACA+AGG - chr1_4:40023748-40023767 None:intergenic 20.0%
!! CTAAATTCATGTTACAATAT+AGG - chr1_4:40023792-40023811 None:intergenic 20.0%
!!! TTGTAACATGAATTTAGTTT+TGG + chr1_4:40023795-40023814 Msa0162720:three_prime_UTR 20.0%
! TTATGACTTATTGATATCTC+GGG + chr1_4:40006803-40006822 Msa0162720:intron 25.0%
! AAAATTTATGTAGAACAGCT+TGG + chr1_4:40006867-40006886 Msa0162720:intron 25.0%
!!! TTGGTGTTGTGATTTTTTTT+AGG + chr1_4:40006886-40006905 Msa0162720:intron 25.0%
! AGGAATTAATAATGATGCAA+AGG + chr1_4:40007059-40007078 Msa0162720:CDS 25.0%
! ATTCTACACAAACTAGAAAA+AGG - chr1_4:40007228-40007247 None:intergenic 25.0%
! TTTGTGTAGAATATCAAAGA+AGG + chr1_4:40007236-40007255 Msa0162720:intron 25.0%
! TGAGAAAAATACTGTTTCAT+TGG + chr1_4:40007546-40007565 Msa0162720:intron 25.0%
! TTTACAAGTCTACTAATGAT+AGG - chr1_4:40007620-40007639 None:intergenic 25.0%
! AAATTCAAAAACACCTCTAA+GGG - chr1_4:40007700-40007719 None:intergenic 25.0%
! AGCTATTTATCTGAAAAACA+TGG + chr1_4:40007742-40007761 Msa0162720:intron 25.0%
! AACTTTGATACGAAAAAGTT+TGG + chr1_4:40007840-40007859 Msa0162720:intron 25.0%
! ACTTTGATACGAAAAAGTTT+GGG + chr1_4:40007841-40007860 Msa0162720:intron 25.0%
!!! CTCTAAAAAAGTGTCATAAT+TGG + chr1_4:40007965-40007984 Msa0162720:intron 25.0%
! AAATCTAAGTCTCTAGTATA+GGG - chr1_4:40008248-40008267 None:intergenic 25.0%
! AAAATCTAAGTCTCTAGTAT+AGG - chr1_4:40008249-40008268 None:intergenic 25.0%
! AACTTTGATACGAAAAAGTT+TGG + chr1_4:40007840-40007859 Msa0162720:intron 25.0%
! ACTTTGATACGAAAAAGTTT+GGG + chr1_4:40007841-40007860 Msa0162720:intron 25.0%
! TGAGAAAAATACTGTTTCAT+TGG + chr1_4:40007546-40007565 Msa0162720:intron 25.0%
! AAATTCAAAAACACCTCTAA+GGG - chr1_4:40007700-40007719 None:intergenic 25.0%
!!! TTTAAAGTTTTGTACATGCT+AGG + chr1_4:40009337-40009356 Msa0162720:intron 25.0%
! AACTGAAGGATTATAGATAA+AGG - chr1_4:40009571-40009590 None:intergenic 25.0%
! TGTAAAAGATATTGGCAATA+TGG - chr1_4:40009670-40009689 None:intergenic 25.0%
!! ATAACTTTAAGGATGTTACA+CGG - chr1_4:40009913-40009932 None:intergenic 25.0%
! CACCTTTATAGATAACTTTA+AGG - chr1_4:40009924-40009943 None:intergenic 25.0%
!! TACTATTTGGTCCTTTTATA+TGG + chr1_4:40010135-40010154 Msa0162720:intron 25.0%
!! CTTTTACTGTTAATAAGTGT+TGG + chr1_4:40010215-40010234 Msa0162720:intron 25.0%
! ATTTATGTCATATCTCTAGA+CGG - chr1_4:40010253-40010272 None:intergenic 25.0%
! CTACAAACTTTGTAAACTTT+AGG - chr1_4:40010706-40010725 None:intergenic 25.0%
! CTATTATACAACTGAAAACA+GGG - chr1_4:40010731-40010750 None:intergenic 25.0%
! TGAAATACAGAAAAACAAGA+TGG - chr1_4:40010790-40010809 None:intergenic 25.0%
! TCTCATGTTTCAGATAATAT+AGG + chr1_4:40010926-40010945 Msa0162720:intron 25.0%
! CTCATGTTTCAGATAATATA+GGG + chr1_4:40010927-40010946 Msa0162720:intron 25.0%
! AATTACATTACTACAAGCTA+TGG - chr1_4:40011409-40011428 None:intergenic 25.0%
! AAAAACAAAAAGGACTAATC+CGG - chr1_4:40011656-40011675 None:intergenic 25.0%
! TTTACGTGAATGTTTATTAC+CGG + chr1_4:40011899-40011918 Msa0162720:intron 25.0%
! CTGTAAAATTAGGATTGAAT+TGG + chr1_4:40012020-40012039 Msa0162720:intron 25.0%
!!! TAAGCACTTTTTAACAAAGT+TGG + chr1_4:40012129-40012148 Msa0162720:intron 25.0%
! TAACAAAGTTGGATGAAAAA+AGG + chr1_4:40012140-40012159 Msa0162720:intron 25.0%
! AACAAAGTTGGATGAAAAAA+GGG + chr1_4:40012141-40012160 Msa0162720:intron 25.0%
!! TTTAAGTTTAATGTTTGCAC+CGG - chr1_4:40012257-40012276 None:intergenic 25.0%
! TAAATATTAGAAATGCACTC+TGG - chr1_4:40012318-40012337 None:intergenic 25.0%
! GCTTGTAAACTTATTCATAT+AGG + chr1_4:40012627-40012646 Msa0162720:intron 25.0%
! TTCTTGTGTCTTAATGATAA+TGG - chr1_4:40012793-40012812 None:intergenic 25.0%
! TATCAGATACAAATGCTATT+AGG + chr1_4:40013006-40013025 Msa0162720:intron 25.0%
!!! GTTTGGCATATTTCTTATTT+TGG + chr1_4:40013101-40013120 Msa0162720:intron 25.0%
! GAAGAAAATATATGTGAACA+TGG - chr1_4:40013492-40013511 None:intergenic 25.0%
! AAGAAGAATGGCTATTTATT+GGG - chr1_4:40013667-40013686 None:intergenic 25.0%
! AAAGAAGAATGGCTATTTAT+TGG - chr1_4:40013668-40013687 None:intergenic 25.0%
!! GTTTTTATATAACACAAAGC+TGG - chr1_4:40013702-40013721 None:intergenic 25.0%
!!! CTCTAAAAAAGTGTCATAAT+TGG + chr1_4:40007965-40007984 Msa0162720:intron 25.0%
! GTTTATCATGTCATATTATG+TGG - chr1_4:40014066-40014085 None:intergenic 25.0%
! TATACTGTATGTCAATTCTT+AGG + chr1_4:40014566-40014585 Msa0162720:intron 25.0%
! TTCATAATATACTCAATGGT+TGG - chr1_4:40014859-40014878 None:intergenic 25.0%
! ACACTTCATAATATACTCAA+TGG - chr1_4:40014863-40014882 None:intergenic 25.0%
! TTATGAAGTGTATATTTAGC+GGG + chr1_4:40014872-40014891 Msa0162720:CDS 25.0%
! GTTTATATTAATGTGTTCAC+TGG + chr1_4:40014916-40014935 Msa0162720:intron 25.0%
! GGTCTTACAAAAATATGTAT+GGG - chr1_4:40014969-40014988 None:intergenic 25.0%
! TATATGAAGCAAAACATCAT+TGG + chr1_4:40015046-40015065 Msa0162720:intron 25.0%
! CTTGTCGTAATTATATAGAA+TGG + chr1_4:40015171-40015190 Msa0162720:intron 25.0%
! TGAAAAGATATTGAAGAGTA+AGG - chr1_4:40015213-40015232 None:intergenic 25.0%
! TGTTAAATTCAATGAGATGA+AGG - chr1_4:40015493-40015512 None:intergenic 25.0%
! TCATCTCATTGAATTTAACA+AGG + chr1_4:40015493-40015512 Msa0162720:CDS 25.0%
!! TGCACTTTTAATGTTCTTTT+TGG + chr1_4:40015608-40015627 Msa0162720:intron 25.0%
!! TCTTTATTTATCTACACCTT+TGG + chr1_4:40015847-40015866 Msa0162720:intron 25.0%
!! CTTTATTTATCTACACCTTT+GGG + chr1_4:40015848-40015867 Msa0162720:intron 25.0%
! TTTATTTATCTACACCTTTG+GGG + chr1_4:40015849-40015868 Msa0162720:intron 25.0%
! TATATAGACCCAGATTATTA+AGG + chr1_4:40016538-40016557 Msa0162720:intron 25.0%
! ATATAGACCCAGATTATTAA+GGG + chr1_4:40016539-40016558 Msa0162720:intron 25.0%
!! CCAATTATGACACAATTTTA+TGG - chr1_4:40016593-40016612 None:intergenic 25.0%
! CCATAAAATTGTGTCATAAT+TGG + chr1_4:40016590-40016609 Msa0162720:intron 25.0%
! TAAAATTGTGTCATAATTGG+GGG + chr1_4:40016593-40016612 Msa0162720:intron 25.0%
! GGTCAAAATTTAATTAGTCA+AGG - chr1_4:40016690-40016709 None:intergenic 25.0%
! GTTGAGTAAATATTAGAAAC+AGG - chr1_4:40016711-40016730 None:intergenic 25.0%
! TTCATGATATCAAATAAGAG+GGG - chr1_4:40016764-40016783 None:intergenic 25.0%
! CTTCATGATATCAAATAAGA+GGG - chr1_4:40016765-40016784 None:intergenic 25.0%
!! CTCTTATTTGATATCATGAA+GGG + chr1_4:40016764-40016783 Msa0162720:intron 25.0%
! TAGAGAATATATCAAATACC+TGG - chr1_4:40016972-40016991 None:intergenic 25.0%
! TCTTATACTTCAGAATCAAA+TGG + chr1_4:40017069-40017088 Msa0162720:CDS 25.0%
! ACAGCCACATAAATAAAAAA+AGG - chr1_4:40017251-40017270 None:intergenic 25.0%
! GGATAATAATTAATCCATCA+AGG - chr1_4:40017430-40017449 None:intergenic 25.0%
! ATAAGTTATTTGAGAGTGAA+AGG - chr1_4:40017475-40017494 None:intergenic 25.0%
! TTTCACTCTCAAATAACTTA+TGG + chr1_4:40017474-40017493 Msa0162720:intron 25.0%
! TTCACTCTCAAATAACTTAT+GGG + chr1_4:40017475-40017494 Msa0162720:intron 25.0%
! AAGATTACAAAAGAATGTTG+TGG - chr1_4:40017509-40017528 None:intergenic 25.0%
!!! TCATAGATGAAAGTATTTAG+AGG - chr1_4:40017533-40017552 None:intergenic 25.0%
! TCTATGACAGAATAATCATT+TGG + chr1_4:40017546-40017565 Msa0162720:intron 25.0%
!! AGTGTGCAAAAGTATATTAT+AGG - chr1_4:40017710-40017729 None:intergenic 25.0%
! AGGAAAATGATTCTACAAAA+TGG - chr1_4:40017812-40017831 None:intergenic 25.0%
! AAATCTTAGATGTAATGCAT+GGG + chr1_4:40017833-40017852 Msa0162720:CDS 25.0%
!! CTTTTTGTACATCCTTAATA+TGG + chr1_4:40017873-40017892 Msa0162720:CDS 25.0%
!! ATGAATTCCAACTTTTCATT+CGG + chr1_4:40018022-40018041 Msa0162720:intron 25.0%
!! TGTATTATTATTTGTTGAGC+AGG + chr1_4:40018091-40018110 Msa0162720:intron 25.0%
!!! TTTAATTTGCTAACGTTCTT+TGG + chr1_4:40018256-40018275 Msa0162720:intron 25.0%
! TTTCATGAAAACGTTACAAA+TGG + chr1_4:40018465-40018484 Msa0162720:intron 25.0%
! GGAATTTAATGAAATTGGAA+TGG - chr1_4:40018702-40018721 None:intergenic 25.0%
!!! TTTTGGAAGAAACTAATGTT+CGG + chr1_4:40018794-40018813 Msa0162720:intron 25.0%
!! ATATCACTAACTATTTTACC+GGG - chr1_4:40018841-40018860 None:intergenic 25.0%
! ATATAATCATTCTTTCTTGC+AGG + chr1_4:40018859-40018878 Msa0162720:intron 25.0%
!! TACTATTCATTTGTTTCTTG+TGG + chr1_4:40019268-40019287 Msa0162720:intron 25.0%
!!! TGGTTTTTTAAATGACTAGA+TGG + chr1_4:40019329-40019348 Msa0162720:intron 25.0%
!!! GGTTTTTTAAATGACTAGAT+GGG + chr1_4:40019330-40019349 Msa0162720:intron 25.0%
! AATATTAGAGAGAGAGAATT+AGG + chr1_4:40019370-40019389 Msa0162720:intron 25.0%
! ATATTAGAGAGAGAGAATTA+GGG + chr1_4:40019371-40019390 Msa0162720:intron 25.0%
!! GTTTCTCTTATAGTTTTTCT+AGG - chr1_4:40019531-40019550 None:intergenic 25.0%
!! TAATGAGTTGGAACAAAATA+TGG + chr1_4:40019572-40019591 Msa0162720:intron 25.0%
! TGGATTATGATAGAACATTA+TGG + chr1_4:40019592-40019611 Msa0162720:intron 25.0%
!!! ATGTTTTAGATAATAGACCT+AGG - chr1_4:40019748-40019767 None:intergenic 25.0%
!! TAGGTCTATTATCTAAAACA+TGG + chr1_4:40019747-40019766 Msa0162720:intron 25.0%
!! AGGTCTATTATCTAAAACAT+GGG + chr1_4:40019748-40019767 Msa0162720:intron 25.0%
! AGCTGAAAACTCAATAAATT+GGG + chr1_4:40019774-40019793 Msa0162720:intron 25.0%
! AAATATAAGGACAGTTACTT+GGG - chr1_4:40020320-40020339 None:intergenic 25.0%
! AGCATGTATTCAAATCTTTA+CGG - chr1_4:40020434-40020453 None:intergenic 25.0%
!! TGATAAGTCTAAAACAGAAA+GGG - chr1_4:40020577-40020596 None:intergenic 25.0%
!! TTGATAAGTCTAAAACAGAA+AGG - chr1_4:40020578-40020597 None:intergenic 25.0%
!! TCTAAATTGATTTCAATGGT+TGG - chr1_4:40020691-40020710 None:intergenic 25.0%
!! AATCTTTAGGAAGCAATATA+GGG - chr1_4:40020720-40020739 None:intergenic 25.0%
!! AAATCTTTAGGAAGCAATAT+AGG - chr1_4:40020721-40020740 None:intergenic 25.0%
! GAGGAATTGTTCATTTATTA+AGG - chr1_4:40021095-40021114 None:intergenic 25.0%
!! ATTCTCCTATCTTTTCTTTT+GGG + chr1_4:40021269-40021288 Msa0162720:intron 25.0%
! AATAGAAATATCTGTGTACT+AGG + chr1_4:40021613-40021632 Msa0162720:intron 25.0%
! ATATAAGTTATTAGGGAAGT+AGG - chr1_4:40021734-40021753 None:intergenic 25.0%
!! ATCTTGTTTGATGAATGAAT+TGG + chr1_4:40021836-40021855 Msa0162720:intron 25.0%
! TATAAATACAACATAAGGCA+AGG - chr1_4:40021983-40022002 None:intergenic 25.0%
! CTGTGTATAAATACAACATA+AGG - chr1_4:40021988-40022007 None:intergenic 25.0%
! CTTATGTTGTATTTATACAC+AGG + chr1_4:40021986-40022005 Msa0162720:intron 25.0%
! TGTGTTTATATAACTAACAC+AGG - chr1_4:40022264-40022283 None:intergenic 25.0%
! ATCGTATTTAGTAGAAATAG+GGG - chr1_4:40022298-40022317 None:intergenic 25.0%
! AGTCTTAATCCTACTAAATA+AGG + chr1_4:40022327-40022346 Msa0162720:intron 25.0%
! GAAATATGGAAACAAATCAT+AGG + chr1_4:40022371-40022390 Msa0162720:intron 25.0%
! AATTATTCTAAGCTTGTGTT+AGG + chr1_4:40022413-40022432 Msa0162720:intron 25.0%
!! CAAGGAATTTTGCAAATTAA+TGG - chr1_4:40022502-40022521 None:intergenic 25.0%
!!! CAATTTTAACTAAACCATAC+TGG - chr1_4:40022753-40022772 None:intergenic 25.0%
!! TTGCATTTTATCATCTTTTC+TGG + chr1_4:40022862-40022881 Msa0162720:CDS 25.0%
! GGTAAAATTAAGAAGCAAAA+AGG + chr1_4:40022959-40022978 Msa0162720:intron 25.0%
! AAAATTAAGAAGCAAAAAGG+AGG + chr1_4:40022962-40022981 Msa0162720:intron 25.0%
! CACTAAAGTACAATATTGAA+GGG - chr1_4:40023049-40023068 None:intergenic 25.0%
! TCACTAAAGTACAATATTGA+AGG - chr1_4:40023050-40023069 None:intergenic 25.0%
! AGGTAAAATACTCAAAAGTT+TGG - chr1_4:40023080-40023099 None:intergenic 25.0%
! TAACATAATCTAGTGAGATA+TGG + chr1_4:40023226-40023245 Msa0162720:intron 25.0%
!! CATTCTTTTATAGCATAATC+CGG + chr1_4:40023271-40023290 Msa0162720:intron 25.0%
! AAATCATACAGAAGTTGAAA+TGG - chr1_4:40023533-40023552 None:intergenic 25.0%
! TAGTAAGATAGAATACAACA+AGG - chr1_4:40023584-40023603 None:intergenic 25.0%
!! TTACTATGTTCTTTTCCAAT+GGG + chr1_4:40023598-40023617 Msa0162720:three_prime_UTR 25.0%
!!! TCTTCCCCTTTTATTTATTA+AGG + chr1_4:40023645-40023664 Msa0162720:three_prime_UTR 25.0%
!!! CTTCCCCTTTTATTTATTAA+GGG + chr1_4:40023646-40023665 Msa0162720:three_prime_UTR 25.0%
!! GTTTTTAGAGGATTTTGGAA+GGG + chr1_4:40006380-40006399 Msa0162720:intron 30.0%
!!! TTCGATCAGACCTTTTTTTT+CGG + chr1_4:40006477-40006496 Msa0162720:intron 30.0%
TACCAAGTTTCCGAAAAAAA+AGG - chr1_4:40006490-40006509 None:intergenic 30.0%
TCATAAACTGTGTTTGCATA+GGG - chr1_4:40006789-40006808 None:intergenic 30.0%
! CGTGATTATGTAGAATTTTG+AGG + chr1_4:40006918-40006937 Msa0162720:intron 30.0%
TCTGTTGATATTCTCTGTTT+AGG + chr1_4:40006984-40007003 Msa0162720:intron 30.0%
TTATTAATTCCTCCTCTTAG+TGG - chr1_4:40007051-40007070 None:intergenic 30.0%
TAAATGTTAGTATTTGGGGA+TGG + chr1_4:40007272-40007291 Msa0162720:intron 30.0%
TGAGGATAAATGGTAGTATT+TGG + chr1_4:40007296-40007315 Msa0162720:intron 30.0%
GAGGATAAATGGTAGTATTT+GGG + chr1_4:40007297-40007316 Msa0162720:intron 30.0%
AGGATAAATGGTAGTATTTG+GGG + chr1_4:40007298-40007317 Msa0162720:intron 30.0%
AATGTAGTATTTGTCATGCA+AGG + chr1_4:40007334-40007353 Msa0162720:intron 30.0%
ATGTAGTATTTGTCATGCAA+GGG + chr1_4:40007335-40007354 Msa0162720:intron 30.0%
! GAAACAGTATTTTTCTCAGA+TGG - chr1_4:40007544-40007563 None:intergenic 30.0%
! TGTTTCATTGGCTACATTAA+TGG + chr1_4:40007558-40007577 Msa0162720:intron 30.0%
CTTGTAAATGTTGTGATTAC+TGG + chr1_4:40007632-40007651 Msa0162720:intron 30.0%
GAAATTCAAAAACACCTCTA+AGG - chr1_4:40007701-40007720 None:intergenic 30.0%
ATGTGTTAAAAGTCACATAC+TGG + chr1_4:40007932-40007951 Msa0162720:intron 30.0%
AAGCTTAAATACAACCATGA+GGG - chr1_4:40008098-40008117 None:intergenic 30.0%
! ACTAGAGACTTAGATTTTGT+CGG + chr1_4:40008251-40008270 Msa0162720:intron 30.0%
! AATACCATCTTAGTTTGGAT+TGG - chr1_4:40008312-40008331 None:intergenic 30.0%
AAAGAATTTGAAAGGAGTCA+CGG + chr1_4:40008480-40008499 Msa0162720:intron 30.0%
! TTTTCCTTGTTCAATCTGTA+AGG + chr1_4:40008549-40008568 Msa0162720:intron 30.0%
TAAGCCACTAAACAGATTTA+AGG - chr1_4:40008649-40008668 None:intergenic 30.0%
AATGTAGTATTTGTCATGCA+AGG + chr1_4:40007334-40007353 Msa0162720:intron 30.0%
ATGTAGTATTTGTCATGCAA+GGG + chr1_4:40007335-40007354 Msa0162720:intron 30.0%
TCATTTCAATCTACCAATAC+AGG - chr1_4:40008911-40008930 None:intergenic 30.0%
! GAAACAGTATTTTTCTCAGA+TGG - chr1_4:40007544-40007563 None:intergenic 30.0%
! TGTTTCATTGGCTACATTAA+TGG + chr1_4:40007558-40007577 Msa0162720:intron 30.0%
TTTGCAAGTCTACTAATGAT+AGG - chr1_4:40009111-40009130 None:intergenic 30.0%
GAAATTCAAAAACACCTCTA+AGG - chr1_4:40007701-40007720 None:intergenic 30.0%
! AGCTATTTATCTGAAACACA+TGG + chr1_4:40009233-40009252 Msa0162720:intron 30.0%
!! ACCATGGAAACTTTTTGTTT+GGG - chr1_4:40009275-40009294 None:intergenic 30.0%
! TACCATGGAAACTTTTTGTT+TGG - chr1_4:40009276-40009295 None:intergenic 30.0%
TCCACTTCTCATTAAAACAT+CGG - chr1_4:40009638-40009657 None:intergenic 30.0%
CTAGTAGGTTGTTTACTATT+TGG + chr1_4:40010122-40010141 Msa0162720:intron 30.0%
! ACTAAATCTTTTCAGATGCT+CGG + chr1_4:40010164-40010183 Msa0162720:intron 30.0%
! TCAGATGTAGTCTTAGATTT+GGG - chr1_4:40010348-40010367 None:intergenic 30.0%
!!! CAACGAACTTCTTTTAGAAT+AGG - chr1_4:40010372-40010391 None:intergenic 30.0%
! TTCTAAAAGAAGTTCGTTGA+TGG + chr1_4:40010373-40010392 Msa0162720:intron 30.0%
TCTAAAAGAAGTTCGTTGAT+GGG + chr1_4:40010374-40010393 Msa0162720:intron 30.0%
ACTACTTAAGTCATATCACT+AGG - chr1_4:40010461-40010480 None:intergenic 30.0%
!! CTTTGTAAACTTTAGGATAC+AGG - chr1_4:40010699-40010718 None:intergenic 30.0%
CCTATTATACAACTGAAAAC+AGG - chr1_4:40010732-40010751 None:intergenic 30.0%
! CCTGTTTTCAGTTGTATAAT+AGG + chr1_4:40010729-40010748 Msa0162720:intron 30.0%
! TAACCTAGGATTTCTAGATA+AGG - chr1_4:40010837-40010856 None:intergenic 30.0%
! TGTTTATATTTTTCTGCGCT+TGG + chr1_4:40010901-40010920 Msa0162720:intron 30.0%
TGTTTCAGATAATATAGGGA+TGG + chr1_4:40010931-40010950 Msa0162720:intron 30.0%
ATGTCATATCAGTTTCGAAA+GGG - chr1_4:40010962-40010981 None:intergenic 30.0%
AATGTCATATCAGTTTCGAA+AGG - chr1_4:40010963-40010982 None:intergenic 30.0%
TGTAGAATGAGTTACTTAAC+TGG - chr1_4:40011093-40011112 None:intergenic 30.0%
AAAGCAGAATTTACTGAAGA+TGG + chr1_4:40011331-40011350 Msa0162720:CDS 30.0%
ATTCAGTCAGAACAAACATA+TGG + chr1_4:40011426-40011445 Msa0162720:intron 30.0%
TGTATACAGAGTACAGTTTA+AGG - chr1_4:40011555-40011574 None:intergenic 30.0%
TAAAGACTTCAAGATGCATT+TGG - chr1_4:40011618-40011637 None:intergenic 30.0%
!! CACTTTTTAACTGAGTTTGA+TGG - chr1_4:40011763-40011782 None:intergenic 30.0%
CATCAAACTCAGTTAAAAAG+TGG + chr1_4:40011761-40011780 Msa0162720:intron 30.0%
TACATGACCATTTAACATTG+AGG - chr1_4:40012111-40012130 None:intergenic 30.0%
GGTGCAAACATTAAACTTAA+AGG + chr1_4:40012256-40012275 Msa0162720:intron 30.0%
TTAATACCTATAAATGCGGA+AGG + chr1_4:40012605-40012624 Msa0162720:intron 30.0%
GAAATTCAAAGCAATAGACA+GGG - chr1_4:40012688-40012707 None:intergenic 30.0%
AGAAATTCAAAGCAATAGAC+AGG - chr1_4:40012689-40012708 None:intergenic 30.0%
!!! TTAGGATAACCAACCTTTTT+TGG + chr1_4:40013024-40013043 Msa0162720:intron 30.0%
CAAATGTGATATATGACTTG+TGG + chr1_4:40013071-40013090 Msa0162720:intron 30.0%
AGTTAGGACATATTGTCAAT+TGG - chr1_4:40013136-40013155 None:intergenic 30.0%
ATATGTCCTAACTCAAATGA+AGG + chr1_4:40013143-40013162 Msa0162720:intron 30.0%
!! AGTTGGTCTTGGTTTAAAAA+TGG + chr1_4:40013245-40013264 Msa0162720:intron 30.0%
! TATAACTGGTTCAGCAAAAT+TGG + chr1_4:40013355-40013374 Msa0162720:CDS 30.0%
CAATAAGTTAAATAGAGGGA+GGG - chr1_4:40013421-40013440 None:intergenic 30.0%
ACAATAAGTTAAATAGAGGG+AGG - chr1_4:40013422-40013441 None:intergenic 30.0%
TTGATGAGTTCTGTTTATGT+TGG + chr1_4:40013452-40013471 Msa0162720:intron 30.0%
TAAGATTGCAGCAATTTAGA+TGG - chr1_4:40013630-40013649 None:intergenic 30.0%
TAGTCAAATGTCAAAGAACT+AGG - chr1_4:40013800-40013819 None:intergenic 30.0%
AAGCTTAAATACAACCATGA+GGG - chr1_4:40008098-40008117 None:intergenic 30.0%
! AAGATTTTAAGCAATGTGAC+AGG + chr1_4:40014194-40014213 Msa0162720:intron 30.0%
TAAATTGTACCCTAGTTACT+TGG + chr1_4:40014370-40014389 Msa0162720:intron 30.0%
AAAATACCTATGTCATGTGA+TGG - chr1_4:40014542-40014561 None:intergenic 30.0%
TATAAAATATGTGAACCAGC+TGG + chr1_4:40014592-40014611 Msa0162720:intron 30.0%
ACAATTCATGAAAATGAACG+AGG - chr1_4:40014704-40014723 None:intergenic 30.0%
! ATTTTCATGAATTGTGCAAC+TGG + chr1_4:40014709-40014728 Msa0162720:intron 30.0%
!! ATTTCCAAGAGTACTTTCAT+TGG - chr1_4:40014797-40014816 None:intergenic 30.0%
!!! ATTAATGTGTTCACTGGTTT+TGG + chr1_4:40014922-40014941 Msa0162720:intron 30.0%
ACAAAAATATGTATGGGACT+AGG - chr1_4:40014963-40014982 None:intergenic 30.0%
GGGTCTTACAAAAATATGTA+TGG - chr1_4:40014970-40014989 None:intergenic 30.0%
TGTGTTAGATAAAGTTATGC+AGG + chr1_4:40015707-40015726 Msa0162720:CDS 30.0%
TGCAGGTACTTATATATTTC+TGG + chr1_4:40015724-40015743 Msa0162720:intron 30.0%
TGCATTACTTTCTTCACAAA+TGG + chr1_4:40015800-40015819 Msa0162720:intron 30.0%
TTCGTTAGAATGTAAGGAAA+AGG + chr1_4:40015947-40015966 Msa0162720:intron 30.0%
GGAAAAGGTTTCATTAATAG+AGG + chr1_4:40015962-40015981 Msa0162720:intron 30.0%
AAGGTTTCATTAATAGAGGA+AGG + chr1_4:40015966-40015985 Msa0162720:intron 30.0%
TAAGAGGATATATAGCTGTT+TGG + chr1_4:40016038-40016057 Msa0162720:intron 30.0%
! AGGAAGTATATATCAATGAC+AGG + chr1_4:40016136-40016155 Msa0162720:intron 30.0%
AAATCCCTTTATATTGGCAT+TGG + chr1_4:40016159-40016178 Msa0162720:intron 30.0%
TTTGCCAATGCCAATATAAA+GGG - chr1_4:40016166-40016185 None:intergenic 30.0%
! TTTTGCCAATGCCAATATAA+AGG - chr1_4:40016167-40016186 None:intergenic 30.0%
ATCTTCATTGGACATACAAA+AGG - chr1_4:40016282-40016301 None:intergenic 30.0%
!!! TATTTTTCAGGAAAAGTGAC+TGG - chr1_4:40016320-40016339 None:intergenic 30.0%
AAATAGCATGCATAGATTGT+TGG + chr1_4:40016358-40016377 Msa0162720:intron 30.0%
GAATTAGAGACAACTTCATA+TGG - chr1_4:40016431-40016450 None:intergenic 30.0%
AATTTACAACAGTTGGGAAA+GGG - chr1_4:40016497-40016516 None:intergenic 30.0%
TTCACCAATTTACAACAGTT+GGG - chr1_4:40016503-40016522 None:intergenic 30.0%
ATTCACCAATTTACAACAGT+TGG - chr1_4:40016504-40016523 None:intergenic 30.0%
CTGTTGTAAATTGGTGAATT+TGG + chr1_4:40016505-40016524 Msa0162720:intron 30.0%
CAAACTTCCCTTAATAATCT+GGG - chr1_4:40016549-40016568 None:intergenic 30.0%
TCAAACTTCCCTTAATAATC+TGG - chr1_4:40016550-40016569 None:intergenic 30.0%
CCTTCATGATATCAAATAAG+AGG - chr1_4:40016766-40016785 None:intergenic 30.0%
! CCTCTTATTTGATATCATGA+AGG + chr1_4:40016763-40016782 Msa0162720:intron 30.0%
AGAATATATCAAATACCTGG+AGG - chr1_4:40016969-40016988 None:intergenic 30.0%
TCAGAATCAAATGGTATGTT+TGG + chr1_4:40017078-40017097 Msa0162720:intron 30.0%
ATAATCTTAACCCTGTGATA+TGG - chr1_4:40017200-40017219 None:intergenic 30.0%
TGGCTGTTAAATAGTCAATA+TGG + chr1_4:40017264-40017283 Msa0162720:intron 30.0%
TCGTTATCATTTCAACTCAT+AGG - chr1_4:40017298-40017317 None:intergenic 30.0%
! TTGAAATGATAACGAAGCTA+AGG + chr1_4:40017303-40017322 Msa0162720:intron 30.0%
AAACATAGCTGAAATGCTAT+TGG + chr1_4:40017767-40017786 Msa0162720:intron 30.0%
! TGCATTACATCTAAGATTTC+AGG - chr1_4:40017832-40017851 None:intergenic 30.0%
GAAATCTTAGATGTAATGCA+TGG + chr1_4:40017832-40017851 Msa0162720:CDS 30.0%
TTTACGAATAAGGATGATGA+TGG + chr1_4:40018189-40018208 Msa0162720:CDS 30.0%
TTACGAATAAGGATGATGAT+GGG + chr1_4:40018190-40018209 Msa0162720:CDS 30.0%
! ACGTTCTTTGGTTTATGATA+AGG + chr1_4:40018268-40018287 Msa0162720:intron 30.0%
! TAAGGTTTTTGCCATGATTA+TGG + chr1_4:40018286-40018305 Msa0162720:intron 30.0%
TTCTCAACAAACCATAATCA+TGG - chr1_4:40018300-40018319 None:intergenic 30.0%
ATCAACCAGAAATGCTAAAT+GGG - chr1_4:40018365-40018384 None:intergenic 30.0%
AATCAACCAGAAATGCTAAA+TGG - chr1_4:40018366-40018385 None:intergenic 30.0%
! TGAATCTACCAAAATTTGCT+CGG - chr1_4:40018390-40018409 None:intergenic 30.0%
TGATATTGTTCTACAACTAG+CGG + chr1_4:40018500-40018519 Msa0162720:intron 30.0%
AATGATCATTCCTATTTCAG+TGG - chr1_4:40018606-40018625 None:intergenic 30.0%
CAAAAATGGAATGGAATAGT+GGG - chr1_4:40018638-40018657 None:intergenic 30.0%
TCAAAAATGGAATGGAATAG+TGG - chr1_4:40018639-40018658 None:intergenic 30.0%
!! TTCCATTCCATTTTTGACAA+CGG + chr1_4:40018642-40018661 Msa0162720:intron 30.0%
! TGAGAGAACCATTTGTATTT+TGG - chr1_4:40018672-40018691 None:intergenic 30.0%
TTAATGAAATTGGAATGGGT+AGG - chr1_4:40018697-40018716 None:intergenic 30.0%
! TATCACTAACTATTTTACCG+GGG - chr1_4:40018840-40018859 None:intergenic 30.0%
TTGAATTGCTAAAGAATTGC+TGG - chr1_4:40018900-40018919 None:intergenic 30.0%
!!! AATTTTCAGGTTGCATTCTT+AGG + chr1_4:40019113-40019132 Msa0162720:intron 30.0%
!!! ATTTTCAGGTTGCATTCTTA+GGG + chr1_4:40019114-40019133 Msa0162720:intron 30.0%
TTTAAATGACTAGATGGGAT+TGG + chr1_4:40019335-40019354 Msa0162720:intron 30.0%
AGCACCTATATTAGAAAAGA+TGG + chr1_4:40019395-40019414 Msa0162720:intron 30.0%
! TTCGCCATCTTTTCTAATAT+AGG - chr1_4:40019402-40019421 None:intergenic 30.0%
TAGAAAAGATGGCGAAAAAT+AGG + chr1_4:40019406-40019425 Msa0162720:intron 30.0%
AAAAATAGGTTTAGGTGGTT+TGG + chr1_4:40019420-40019439 Msa0162720:intron 30.0%
AAAATAGGTTTAGGTGGTTT+GGG + chr1_4:40019421-40019440 Msa0162720:intron 30.0%
GACTTGTAGATTATGTAGTA+AGG + chr1_4:40019457-40019476 Msa0162720:intron 30.0%
AGATCTAGAGATTAATGAGT+TGG + chr1_4:40019560-40019579 Msa0162720:intron 30.0%
! TCTATTATCTAAAACATGGG+TGG + chr1_4:40019751-40019770 Msa0162720:intron 30.0%
GAGCTGAAAACTCAATAAAT+TGG + chr1_4:40019773-40019792 Msa0162720:intron 30.0%
ATTCCATTGTTAACACGAAT+CGG - chr1_4:40019977-40019996 None:intergenic 30.0%
CAAATATAAGGACAGTTACT+TGG - chr1_4:40020321-40020340 None:intergenic 30.0%
TAGACTTATCAACAGTTCAT+AGG + chr1_4:40020586-40020605 Msa0162720:intron 30.0%
AGACTTATCAACAGTTCATA+GGG + chr1_4:40020587-40020606 Msa0162720:intron 30.0%
!!! TTCATAGGGATTTTGAGTTA+GGG + chr1_4:40020601-40020620 Msa0162720:intron 30.0%
TAGAAATTCTTCCATTCTCA+GGG - chr1_4:40020812-40020831 None:intergenic 30.0%
AATGTAGGTTTGAAAATCAG+AGG - chr1_4:40020974-40020993 None:intergenic 30.0%
ATAGCACAAGATATTGGAAT+AGG - chr1_4:40021043-40021062 None:intergenic 30.0%
! TCAATAGTCTTACAACAGAA+TGG + chr1_4:40021137-40021156 Msa0162720:intron 30.0%
ATGCTAAATAAAACACCTCT+CGG - chr1_4:40021248-40021267 None:intergenic 30.0%
! CATTCTCCTATCTTTTCTTT+TGG + chr1_4:40021268-40021287 Msa0162720:intron 30.0%
!!! AAAAACCTCTTTTTTAAGGG+AGG + chr1_4:40021570-40021589 Msa0162720:intron 30.0%
TAAGTAGACAGATATGAGAA+GGG - chr1_4:40021664-40021683 None:intergenic 30.0%
! GATTTGTTCAACTTCTTTGA+AGG + chr1_4:40021688-40021707 Msa0162720:intron 30.0%
AAAGAAAACTGACCATGATT+GGG - chr1_4:40021770-40021789 None:intergenic 30.0%
TTCATTCATCAAACAAGATC+TGG - chr1_4:40021835-40021854 None:intergenic 30.0%
AGTATCAATGAAAGTCATGT+TGG + chr1_4:40022051-40022070 Msa0162720:intron 30.0%
! TTGTTGAAGTTATAGGGTTT+TGG + chr1_4:40022117-40022136 Msa0162720:intron 30.0%
!!! TATAGGGTTTTGGATAATGA+AGG + chr1_4:40022127-40022146 Msa0162720:intron 30.0%
!! AACCCTGTTTTAGATAATGA+AGG + chr1_4:40022210-40022229 Msa0162720:intron 30.0%
! CTCCTTCATTATCTAAAACA+GGG - chr1_4:40022215-40022234 None:intergenic 30.0%
!! CTGTTTTAGATAATGAAGGA+GGG + chr1_4:40022214-40022233 Msa0162720:intron 30.0%
!! TGTTTTAGATAATGAAGGAG+GGG + chr1_4:40022215-40022234 Msa0162720:intron 30.0%
TAGTAGAAATAGGGGTTAAT+GGG - chr1_4:40022290-40022309 None:intergenic 30.0%
TTAGTAGAAATAGGGGTTAA+TGG - chr1_4:40022291-40022310 None:intergenic 30.0%
CTTAATCCTACTAAATAAGG+TGG + chr1_4:40022330-40022349 Msa0162720:intron 30.0%
! TATTTGCCACCTTATTTAGT+AGG - chr1_4:40022339-40022358 None:intergenic 30.0%
TTATGTATCATAACTTCCAG+AGG + chr1_4:40022582-40022601 Msa0162720:intron 30.0%
GCAATGACATGTTATACTAT+GGG + chr1_4:40022634-40022653 Msa0162720:CDS 30.0%
CAATGACATGTTATACTATG+GGG + chr1_4:40022635-40022654 Msa0162720:CDS 30.0%
! AGAACTTGTTTCTTTGTCTA+AGG + chr1_4:40022674-40022693 Msa0162720:CDS 30.0%
GATTGACTACAAGTGTTAAA+CGG - chr1_4:40022921-40022940 None:intergenic 30.0%
ATAGTATGACGAGTTTAACT+TGG - chr1_4:40023317-40023336 None:intergenic 30.0%
! TTGCTTGTTTACAAGTTGAA+TGG - chr1_4:40023491-40023510 None:intergenic 30.0%
! AACTTCTGTATGATTTGTGT+TGG + chr1_4:40023537-40023556 Msa0162720:exon 30.0%
!! ATGATTTGTGTTGGTTTAGT+TGG + chr1_4:40023546-40023565 Msa0162720:exon 30.0%
! CTTACTATGTTCTTTTCCAA+TGG + chr1_4:40023597-40023616 Msa0162720:three_prime_UTR 30.0%
AAAAACCTAGATACCAATGA+TGG - chr1_4:40023678-40023697 None:intergenic 30.0%
!! AACTTCTAGTTTAGGTTTGA+TGG + chr1_4:40023716-40023735 Msa0162720:three_prime_UTR 30.0%
!! ACTTCTAGTTTAGGTTTGAT+GGG + chr1_4:40023717-40023736 Msa0162720:three_prime_UTR 30.0%
AAATTGCGATATGAACCTGT+GGG - chr1_4:40006131-40006150 None:intergenic 35.0%
CCTAACAATATTGACATTGC+CGG + chr1_4:40006336-40006355 Msa0162720:intron 35.0%
!! GGATGGTTTTTAGAGGATTT+TGG + chr1_4:40006375-40006394 Msa0162720:intron 35.0%
!! GGTTTTTAGAGGATTTTGGA+AGG + chr1_4:40006379-40006398 Msa0162720:intron 35.0%
!!! GACCTTTTTTTTCGGAAACT+TGG + chr1_4:40006485-40006504 Msa0162720:intron 35.0%
AAATTAGTCAATCCTTGTGC+TGG - chr1_4:40006514-40006533 None:intergenic 35.0%
AGCACAAGGATTGACTAATT+TGG + chr1_4:40006513-40006532 Msa0162720:intron 35.0%
GCACAAGGATTGACTAATTT+GGG + chr1_4:40006514-40006533 Msa0162720:intron 35.0%
CACAAGGATTGACTAATTTG+GGG + chr1_4:40006515-40006534 Msa0162720:intron 35.0%
ACAAGGATTGACTAATTTGG+GGG + chr1_4:40006516-40006535 Msa0162720:intron 35.0%
! TCATAGGAATTTTTGCTACC+TGG + chr1_4:40006602-40006621 Msa0162720:intron 35.0%
TTTGAACATGAGACTTAGAG+AGG + chr1_4:40006629-40006648 Msa0162720:intron 35.0%
GTCATAAACTGTGTTTGCAT+AGG - chr1_4:40006790-40006809 None:intergenic 35.0%
TTAACGTTGTTGTCGATGAT+GGG + chr1_4:40007007-40007026 Msa0162720:CDS 35.0%
! TCTTAGTGGATCAAAGAAGT+CGG - chr1_4:40007037-40007056 None:intergenic 35.0%
TAAATGGTAGTATTTGGGGA+TGG + chr1_4:40007302-40007321 Msa0162720:intron 35.0%
!! AAGGGAAGCATGTTTTGTAA+TGG + chr1_4:40007353-40007372 Msa0162720:intron 35.0%
TCATTTCAATCTACCAATGC+AGG - chr1_4:40007420-40007439 None:intergenic 35.0%
TTTGATACTACCAGTGAGTT+AGG + chr1_4:40007442-40007461 Msa0162720:intron 35.0%
TTGATACTACCAGTGAGTTA+GGG + chr1_4:40007443-40007462 Msa0162720:intron 35.0%
! ATTAGGGCTGGAAATTTTTC+CGG + chr1_4:40007479-40007498 Msa0162720:intron 35.0%
ACAGCTCTATATTTGTGTAC+CGG - chr1_4:40007501-40007520 None:intergenic 35.0%
AATCATCACAAAAGCTGAAG+AGG - chr1_4:40007769-40007788 None:intergenic 35.0%
AGTTAGAAATTGGACCTATG+TGG + chr1_4:40007796-40007815 Msa0162720:intron 35.0%
TTTACCACTATTCACCACAT+AGG - chr1_4:40007813-40007832 None:intergenic 35.0%
CACTATAACTCATCCTTGTA+AGG - chr1_4:40008004-40008023 None:intergenic 35.0%
GTTTACTATCTTATCCCTCA+TGG + chr1_4:40008081-40008100 Msa0162720:intron 35.0%
CAAGCTTAAATACAACCATG+AGG - chr1_4:40008099-40008118 None:intergenic 35.0%
TGTATTTAAGCTTGCCTTTG+TGG + chr1_4:40008105-40008124 Msa0162720:intron 35.0%
GAACAATTTCTCCTCTGTAT+CGG + chr1_4:40008199-40008218 Msa0162720:intron 35.0%
TAGAATAGAATCCGATACAG+AGG - chr1_4:40008213-40008232 None:intergenic 35.0%
AGACGGGAAAATAGATTCTA+GGG - chr1_4:40008282-40008301 None:intergenic 35.0%
!! TTTGGATTGGCTATATGAGA+CGG - chr1_4:40008299-40008318 None:intergenic 35.0%
ATAGCCAATCCAAACTAAGA+TGG + chr1_4:40008305-40008324 Msa0162720:intron 35.0%
GCTCTAATACCATCTTAGTT+TGG - chr1_4:40008317-40008336 None:intergenic 35.0%
AGTGTAACTGAATCCAATCA+AGG + chr1_4:40008368-40008387 Msa0162720:intron 35.0%
AACTGAATCCAATCAAGGTT+TGG + chr1_4:40008373-40008392 Msa0162720:intron 35.0%
TCTTACATCCAAACCTTGAT+TGG - chr1_4:40008384-40008403 None:intergenic 35.0%
AATCAAGGTTTGGATGTAAG+AGG + chr1_4:40008383-40008402 Msa0162720:intron 35.0%
! TAAGAGGTGCATATCATGAT+TGG + chr1_4:40008399-40008418 Msa0162720:intron 35.0%
GAGAGAAGAGAAGGAATATA+TGG + chr1_4:40008431-40008450 Msa0162720:intron 35.0%
GACCTAGGAAAGAATTTGAA+AGG + chr1_4:40008472-40008491 Msa0162720:intron 35.0%
CTCCTTTCAAATTCTTTCCT+AGG - chr1_4:40008477-40008496 None:intergenic 35.0%
ATATGGTAGAGCTGAGAAAT+GGG + chr1_4:40008503-40008522 Msa0162720:intron 35.0%
GCTTCCTTAAATCTGTTTAG+TGG + chr1_4:40008642-40008661 Msa0162720:intron 35.0%
!! GATGCACTGATTGATTTGTT+AGG - chr1_4:40008685-40008704 None:intergenic 35.0%
AGTTAGAAATTGGACCTATG+TGG + chr1_4:40007796-40007815 Msa0162720:intron 35.0%
TTTACCACTATTCACCACAT+AGG - chr1_4:40007813-40007832 None:intergenic 35.0%
TGATACGAAAAAGTTTGGGA+TGG + chr1_4:40008793-40008812 Msa0162720:intron 35.0%
!! AAGGGAAGCATGTTTTGTAA+TGG + chr1_4:40007353-40007372 Msa0162720:intron 35.0%
ACATTCTTACTTGCCTGTAT+TGG + chr1_4:40008895-40008914 Msa0162720:intron 35.0%
TTTGATACTACCAGTGAGTT+AGG + chr1_4:40007442-40007461 Msa0162720:intron 35.0%
TTGATACTACCAGTGAGTTA+GGG + chr1_4:40007443-40007462 Msa0162720:intron 35.0%
! ATTAGGGCTGGAAATTTTTC+CGG + chr1_4:40007479-40007498 Msa0162720:intron 35.0%
ACAGCTCTATATTTGTGTAC+CGG - chr1_4:40007501-40007520 None:intergenic 35.0%
AGCTGTCTCATATTGTTCAT+TGG + chr1_4:40007515-40007534 Msa0162720:intron 35.0%
CTTGCAAATGTTGTGATTAC+TGG + chr1_4:40009123-40009142 Msa0162720:intron 35.0%
!! ATGGAAACTTTTTGTTTGGG+GGG - chr1_4:40009272-40009291 None:intergenic 35.0%
!! CATGGAAACTTTTTGTTTGG+GGG - chr1_4:40009273-40009292 None:intergenic 35.0%
!! CCATGGAAACTTTTTGTTTG+GGG - chr1_4:40009274-40009293 None:intergenic 35.0%
AGTTTCCATGGTAAAGAACA+TGG + chr1_4:40009283-40009302 Msa0162720:intron 35.0%
! AAAAAGGGGAAGCATGATAA+TGG - chr1_4:40009319-40009338 None:intergenic 35.0%
CCACTTCTCATTAAAACATC+GGG - chr1_4:40009637-40009656 None:intergenic 35.0%
CTTGTCATGTGCTGAAAATT+GGG - chr1_4:40009747-40009766 None:intergenic 35.0%
ACTTGTCATGTGCTGAAAAT+TGG - chr1_4:40009748-40009767 None:intergenic 35.0%
TCCACAAAAATTTGCAGATG+AGG + chr1_4:40009802-40009821 Msa0162720:CDS 35.0%
CCACAAAAATTTGCAGATGA+GGG + chr1_4:40009803-40009822 Msa0162720:CDS 35.0%
AGCTCAAAGATGAAATTACC+CGG + chr1_4:40009870-40009889 Msa0162720:CDS 35.0%
!! ACTCGAAGGTTTTATCTAGT+AGG + chr1_4:40010107-40010126 Msa0162720:intron 35.0%
! CTCAGATGTAGTCTTAGATT+TGG - chr1_4:40010349-40010368 None:intergenic 35.0%
AATTGAAATCAAGTCCCCAA+GGG + chr1_4:40010511-40010530 Msa0162720:intron 35.0%
TTTATATGAGTCAACCCTTG+GGG - chr1_4:40010528-40010547 None:intergenic 35.0%
GTTTATATGAGTCAACCCTT+GGG - chr1_4:40010529-40010548 None:intergenic 35.0%
TGACCTTATCTAGAAATCCT+AGG + chr1_4:40010831-40010850 Msa0162720:intron 35.0%
TAAAGAAGGATCTCTAACCT+AGG - chr1_4:40010851-40010870 None:intergenic 35.0%
TTTATGTAACCTCTCAGGTT+AGG + chr1_4:40010867-40010886 Msa0162720:intron 35.0%
TGAGTGTGAATAAAGCACAA+AGG - chr1_4:40011001-40011020 None:intergenic 35.0%
ATTCTACAAACTTGAGAGTG+AGG + chr1_4:40011105-40011124 Msa0162720:intron 35.0%
TTCTACAAACTTGAGAGTGA+GGG + chr1_4:40011106-40011125 Msa0162720:intron 35.0%
GATCTCAATTGTAATGCTAG+TGG + chr1_4:40011156-40011175 Msa0162720:intron 35.0%
ACAGATATCATGGACATGAT+TGG + chr1_4:40011280-40011299 Msa0162720:CDS 35.0%
CAGATATCATGGACATGATT+GGG + chr1_4:40011281-40011300 Msa0162720:CDS 35.0%
AGATATCATGGACATGATTG+GGG + chr1_4:40011282-40011301 Msa0162720:CDS 35.0%
AACTGTACTCTGTATACAAC+TGG + chr1_4:40011557-40011576 Msa0162720:intron 35.0%
ACTGTACTCTGTATACAACT+GGG + chr1_4:40011558-40011577 Msa0162720:intron 35.0%
!! GCTCACTTTTACTGACATAA+AGG - chr1_4:40011695-40011714 None:intergenic 35.0%
AACTGAGTTTGATGGAAAGA+GGG - chr1_4:40011755-40011774 None:intergenic 35.0%
TAACTGAGTTTGATGGAAAG+AGG - chr1_4:40011756-40011775 None:intergenic 35.0%
GTTATGTGAACGTTTATTGC+TGG + chr1_4:40011783-40011802 Msa0162720:intron 35.0%
!! ATAGGTGTTTTGTTCTGTCT+TGG + chr1_4:40011837-40011856 Msa0162720:intron 35.0%
!! ATAGGTGTTTTGTTCTGTCT+TGG + chr1_4:40011837-40011856 Msa0162720:intron 35.0%
ATGACCATTTAACATTGAGG+TGG - chr1_4:40012108-40012127 None:intergenic 35.0%
AAAAACTCAAAGGACTGATC+CGG + chr1_4:40012235-40012254 Msa0162720:intron 35.0%
! TTTTTCTGTAAGTTCACAGC+TGG + chr1_4:40012351-40012370 Msa0162720:intron 35.0%
ACTGAAGTGAGATATTCAAC+AGG - chr1_4:40012380-40012399 None:intergenic 35.0%
AGTTGTATTCATGGATGTTC+AGG + chr1_4:40012660-40012679 Msa0162720:intron 35.0%
CAATAATTACAGAGGGATGT+GGG - chr1_4:40012916-40012935 None:intergenic 35.0%
ACAATAATTACAGAGGGATG+TGG - chr1_4:40012917-40012936 None:intergenic 35.0%
CCAACGACAATAATTACAGA+GGG - chr1_4:40012923-40012942 None:intergenic 35.0%
CATGGATATCCAAAAAAGGT+TGG - chr1_4:40013036-40013055 None:intergenic 35.0%
GATGCATGGATATCCAAAAA+AGG - chr1_4:40013040-40013059 None:intergenic 35.0%
! TGACTTGTGGAAATAGAGTT+TGG + chr1_4:40013084-40013103 Msa0162720:intron 35.0%
! GTGACTTGTAATGTTTGAGA+TGG - chr1_4:40013175-40013194 None:intergenic 35.0%
ATAGCAAGTTTCTTTGGCAT+CGG - chr1_4:40013338-40013357 None:intergenic 35.0%
CCAGTTATAGCAAGTTTCTT+TGG - chr1_4:40013344-40013363 None:intergenic 35.0%
!! CCAAAGAAACTTGCTATAAC+TGG + chr1_4:40013341-40013360 Msa0162720:CDS 35.0%
AAATAGCCATTCTTCTTTGC+TGG + chr1_4:40013670-40013689 Msa0162720:intron 35.0%
! AAAAGCATAAGCAGTTAGCA+CGG - chr1_4:40013736-40013755 None:intergenic 35.0%
! TGCTAACTGCTTATGCTTTT+GGG + chr1_4:40013736-40013755 Msa0162720:intron 35.0%
!!! CTTATGCTTTTGGGATAATC+TGG + chr1_4:40013745-40013764 Msa0162720:intron 35.0%
ATGTGTTAAGAGTCACATAC+TGG + chr1_4:40013834-40013853 Msa0162720:intron 35.0%
CACTATAACTCATCCTTGTA+AGG - chr1_4:40008004-40008023 None:intergenic 35.0%
GTTTACTATCTTATCCCTCA+TGG + chr1_4:40008081-40008100 Msa0162720:intron 35.0%
CAAGCTTAAATACAACCATG+AGG - chr1_4:40008099-40008118 None:intergenic 35.0%
TGTATTTAAGCTTGCCTTTG+TGG + chr1_4:40008105-40008124 Msa0162720:intron 35.0%
TGCAGATATGTACTTTGTTG+TGG + chr1_4:40014110-40014129 Msa0162720:intron 35.0%
!!! CTGTTTTAACACTCTATGAG+AGG - chr1_4:40014174-40014193 None:intergenic 35.0%
TGCATATTGCCGTCTATATA+TGG + chr1_4:40014496-40014515 Msa0162720:CDS 35.0%
CACAATGAGCCATATATAGA+CGG - chr1_4:40014508-40014527 None:intergenic 35.0%
!! ATATTTTAAAAGGGTCCAGC+TGG - chr1_4:40014610-40014629 None:intergenic 35.0%
!!! CTGGACCCTTTTAAAATATG+TGG + chr1_4:40014611-40014630 Msa0162720:intron 35.0%
!!! GAATCCAGAGATTTTTTGTC+TGG + chr1_4:40014647-40014666 Msa0162720:intron 35.0%
AAGACCAGACAAAAAATCTC+TGG - chr1_4:40014654-40014673 None:intergenic 35.0%
AAAATTGCAAATCAGCCTGA+TGG + chr1_4:40014831-40014850 Msa0162720:CDS 35.0%
!! TATATTTAGCGGGTTATCTC+AGG + chr1_4:40014882-40014901 Msa0162720:CDS 35.0%
TGAAGCAAAACATCATTGGT+CGG + chr1_4:40015050-40015069 Msa0162720:intron 35.0%
ATGCACATAGCTACATGTTT+AGG + chr1_4:40015145-40015164 Msa0162720:intron 35.0%
TGCACATAGCTACATGTTTA+GGG + chr1_4:40015146-40015165 Msa0162720:intron 35.0%
GATATTGAAGAGTAAGGCAT+AGG - chr1_4:40015207-40015226 None:intergenic 35.0%
AGCATAACACAGGATAAAGA+CGG - chr1_4:40015300-40015319 None:intergenic 35.0%
TACTTAGATCAGCATAACAC+AGG - chr1_4:40015310-40015329 None:intergenic 35.0%
AATGAAGTTCTATCAGAGCT+TGG + chr1_4:40015356-40015375 Msa0162720:CDS 35.0%
TGAGACTGTTTCATGTGTTT+CGG + chr1_4:40015403-40015422 Msa0162720:CDS 35.0%
ACCTGAATTACAGATTGCTT+GGG + chr1_4:40015640-40015659 Msa0162720:CDS 35.0%
!! ACAGCATTGACAATGTTAAC+CGG - chr1_4:40015690-40015709 None:intergenic 35.0%
ATAATACACCATTTCCCCAA+AGG - chr1_4:40015866-40015885 None:intergenic 35.0%
!! ATCTTTGTTGTTTCCTCTAG+TGG + chr1_4:40015884-40015903 Msa0162720:intron 35.0%
GACAGGAAATCCCTTTATAT+TGG + chr1_4:40016153-40016172 Msa0162720:intron 35.0%
ATTCGAACAGCTATCTTCAT+TGG - chr1_4:40016294-40016313 None:intergenic 35.0%
AAGTTGTGTGTATGCATGTA+TGG + chr1_4:40016392-40016411 Msa0162720:intron 35.0%
AGTTGTGTGTATGCATGTAT+GGG + chr1_4:40016393-40016412 Msa0162720:intron 35.0%
CAATTTACAACAGTTGGGAA+AGG - chr1_4:40016498-40016517 None:intergenic 35.0%
CTTTCCCAACTGTTGTAAAT+TGG + chr1_4:40016496-40016515 Msa0162720:intron 35.0%
AAGGGAAGTTTGATCAGTTA+AGG + chr1_4:40016557-40016576 Msa0162720:intron 35.0%
! TTGATCAGTTAAGGAAGTGT+TGG + chr1_4:40016566-40016585 Msa0162720:intron 35.0%
TATCAAATAAGAGGGGTTTC+TGG - chr1_4:40016757-40016776 None:intergenic 35.0%
TCACAGGGTTAAGATTATTG+AGG + chr1_4:40017202-40017221 Msa0162720:intron 35.0%
! CATTTGGACATCATTTTGAG+AGG + chr1_4:40017562-40017581 Msa0162720:CDS 35.0%
! TCTGGAAGATGTGTTTTATC+TGG + chr1_4:40017678-40017697 Msa0162720:CDS 35.0%
ACTGTTCTTCCACTCATTAT+TGG + chr1_4:40017931-40017950 Msa0162720:intron 35.0%
ATATGAGTGCCAATAATGAG+TGG - chr1_4:40017943-40017962 None:intergenic 35.0%
TACACGTATTTGTGCATTTG+TGG + chr1_4:40017995-40018014 Msa0162720:intron 35.0%
! AATTCCAACTTTTCATTCGG+TGG + chr1_4:40018025-40018044 Msa0162720:intron 35.0%
! TATTATTTGTTGAGCAGGAG+TGG + chr1_4:40018096-40018115 Msa0162720:intron 35.0%
!! CTTGCTTTCTGAAATTTCTC+AGG + chr1_4:40018146-40018165 Msa0162720:CDS 35.0%
TCAGGCTCTACATGATAATA+TGG + chr1_4:40018164-40018183 Msa0162720:CDS 35.0%
GCTAATTGCTAGGTAGATTA+TGG + chr1_4:40018325-40018344 Msa0162720:intron 35.0%
TTGCTAGGTAGATTATGGAA+CGG + chr1_4:40018330-40018349 Msa0162720:intron 35.0%
GAACAATATCAGATGTTCTG+AGG - chr1_4:40018491-40018510 None:intergenic 35.0%
TAACTTACCCTTGTAATGCA+CGG - chr1_4:40018532-40018551 None:intergenic 35.0%
TGCATTACAAGGGTAAGTTA+TGG + chr1_4:40018532-40018551 Msa0162720:intron 35.0%
GCATTACAAGGGTAAGTTAT+GGG + chr1_4:40018533-40018552 Msa0162720:intron 35.0%
TGGCAACATAAGGAATAGAA+TGG - chr1_4:40018582-40018601 None:intergenic 35.0%
ATCATTCCTATTTCAGTGGT+TGG - chr1_4:40018602-40018621 None:intergenic 35.0%
TTCCGTTGTCAAAAATGGAA+TGG - chr1_4:40018647-40018666 None:intergenic 35.0%
ACGGAACACCAAAATACAAA+TGG + chr1_4:40018661-40018680 Msa0162720:intron 35.0%
!!! GGTACACCGAATTTTTTTCA+AGG - chr1_4:40018723-40018742 None:intergenic 35.0%
CTTACGAGTATAAAGTCTAG+AGG + chr1_4:40018752-40018771 Msa0162720:intron 35.0%
!!! TTTTCAGGTTGCATTCTTAG+GGG + chr1_4:40019115-40019134 Msa0162720:intron 35.0%
!! GTAGATGGATTGATTGATTC+AGG + chr1_4:40019152-40019171 Msa0162720:CDS 35.0%
! GGATTGATTGATTCAGGAAT+TGG + chr1_4:40019158-40019177 Msa0162720:CDS 35.0%
! TTGGTTGGGTGAACATTTTA+AGG - chr1_4:40019213-40019232 None:intergenic 35.0%
! TTAGTACTTCCACATTGGTT+GGG - chr1_4:40019227-40019246 None:intergenic 35.0%
AGATGGCGAAAAATAGGTTT+AGG + chr1_4:40019412-40019431 Msa0162720:intron 35.0%
GATGATAGTCAAATCACTAG+AGG + chr1_4:40019495-40019514 Msa0162720:intron 35.0%
AGTCTTTAATAGGGCTACAA+GGG - chr1_4:40020146-40020165 None:intergenic 35.0%
AAGTCTTTAATAGGGCTACA+AGG - chr1_4:40020147-40020166 None:intergenic 35.0%
TCTTGGAGTAACAAAGAAGT+GGG - chr1_4:40020361-40020380 None:intergenic 35.0%
ATCTTGGAGTAACAAAGAAG+TGG - chr1_4:40020362-40020381 None:intergenic 35.0%
GGATTTGAATGACTAGATCA+AGG - chr1_4:40020469-40020488 None:intergenic 35.0%
! CGCAAAGGAATTTTCTTGAA+TGG - chr1_4:40020490-40020509 None:intergenic 35.0%
GAAAATTCCTTTGCGATACT+CGG + chr1_4:40020495-40020514 Msa0162720:intron 35.0%
AAAATTCCTTTGCGATACTC+GGG + chr1_4:40020496-40020515 Msa0162720:intron 35.0%
AAAGAGAACAACTTGAACTC+AGG - chr1_4:40020541-40020560 None:intergenic 35.0%
! AAGTCTAAAACAGAAAGGGA+AGG - chr1_4:40020573-40020592 None:intergenic 35.0%
!!! GTTCATAGGGATTTTGAGTT+AGG + chr1_4:40020600-40020619 Msa0162720:intron 35.0%
!! GGGCTCTAAATTGATTTCAA+TGG - chr1_4:40020695-40020714 None:intergenic 35.0%
TTAGGAAGCAATATAGGGTA+GGG - chr1_4:40020715-40020734 None:intergenic 35.0%
TTTAGGAAGCAATATAGGGT+AGG - chr1_4:40020716-40020735 None:intergenic 35.0%
AGAAATTCTTCCATTCTCAG+GGG - chr1_4:40020811-40020830 None:intergenic 35.0%
CTAGAAATTCTTCCATTCTC+AGG - chr1_4:40020813-40020832 None:intergenic 35.0%
GGCAACAAATTTGAAAGCAA+AGG - chr1_4:40020876-40020895 None:intergenic 35.0%
CTAAACCAAAACACACAACA+CGG - chr1_4:40020911-40020930 None:intergenic 35.0%
AGATTGAAGCTCTTGAATGT+AGG - chr1_4:40020989-40021008 None:intergenic 35.0%
ACTGTCATAGCACAAGATAT+TGG - chr1_4:40021049-40021068 None:intergenic 35.0%
TTACAACAGAATGGATACAG+AGG + chr1_4:40021146-40021165 Msa0162720:intron 35.0%
AATGGATACAGAGGAAATGA+GGG + chr1_4:40021155-40021174 Msa0162720:intron 35.0%
AAGCACCCAAAAGAAAAGAT+AGG - chr1_4:40021277-40021296 None:intergenic 35.0%
! CATTCTTTAGAAAGAAGCCA+TGG - chr1_4:40021357-40021376 None:intergenic 35.0%
GGATACAAAGAATGCAATTG+AGG - chr1_4:40021393-40021412 None:intergenic 35.0%
GCTGTGTAGCTTCTTAATTA+TGG + chr1_4:40021498-40021517 Msa0162720:CDS 35.0%
AAGTAGACAGATATGAGAAG+GGG - chr1_4:40021663-40021682 None:intergenic 35.0%
GTAAGTAGACAGATATGAGA+AGG - chr1_4:40021665-40021684 None:intergenic 35.0%
TTATTAGGGAAGTAGGTAAC+TGG - chr1_4:40021727-40021746 None:intergenic 35.0%
CAAAGAAAACTGACCATGAT+TGG - chr1_4:40021771-40021790 None:intergenic 35.0%
!! AAATCCGTGTCCTCATTTTT+GGG - chr1_4:40021881-40021900 None:intergenic 35.0%
! AAAATCCGTGTCCTCATTTT+TGG - chr1_4:40021882-40021901 None:intergenic 35.0%
ACCTGTGTATTTGCATGATA+TGG - chr1_4:40021951-40021970 None:intergenic 35.0%
TCCAGAGTAATGCGTTTATT+TGG + chr1_4:40022092-40022111 Msa0162720:intron 35.0%
CCAGAGTAATGCGTTTATTT+GGG + chr1_4:40022093-40022112 Msa0162720:intron 35.0%
CAGAGTAATGCGTTTATTTG+GGG + chr1_4:40022094-40022113 Msa0162720:intron 35.0%
! TTTGGGGTTGTTGAAGTTAT+AGG + chr1_4:40022110-40022129 Msa0162720:intron 35.0%
TTGGGGTTGTTGAAGTTATA+GGG + chr1_4:40022111-40022130 Msa0162720:intron 35.0%
! CCTCCTTCATTATCTAAAAC+AGG - chr1_4:40022216-40022235 None:intergenic 35.0%
!! CCTGTTTTAGATAATGAAGG+AGG + chr1_4:40022213-40022232 Msa0162720:intron 35.0%
AGGAAAAAAACAGAATCCTC+TGG - chr1_4:40022601-40022620 None:intergenic 35.0%
!!! TTTTTTCCTTTCCAGATACC+AGG + chr1_4:40022612-40022631 Msa0162720:intron 35.0%
TAGTATAACATGTCATTGCC+TGG - chr1_4:40022633-40022652 None:intergenic 35.0%
GGCAATGACATGTTATACTA+TGG + chr1_4:40022633-40022652 Msa0162720:CDS 35.0%
ACCATAACTAATGCGTGATT+TGG + chr1_4:40023021-40023040 Msa0162720:intron 35.0%
CCATAACTAATGCGTGATTT+GGG + chr1_4:40023022-40023041 Msa0162720:intron 35.0%
!! AAAAAGTGCTGAATACAACG+AGG - chr1_4:40023100-40023119 None:intergenic 35.0%
TTGATCAACATCATACTAGC+CGG - chr1_4:40023293-40023312 None:intergenic 35.0%
! TTACAAGTTGAATGGTTGAC+TGG - chr1_4:40023483-40023502 None:intergenic 35.0%
!! TTGTGTTGGTTTAGTTGGAT+TGG + chr1_4:40023551-40023570 Msa0162720:three_prime_UTR 35.0%
CTCAAACTAATTAGTCCCAT+TGG - chr1_4:40023616-40023635 None:intergenic 35.0%
TTAAGGGAAAGAACCATCAT+TGG + chr1_4:40023662-40023681 Msa0162720:three_prime_UTR 35.0%
AAGAACCATCATTGGTATCT+AGG + chr1_4:40023670-40023689 Msa0162720:three_prime_UTR 35.0%
!! TGTTCGTGAACTTCTAGTTT+AGG + chr1_4:40023708-40023727 Msa0162720:three_prime_UTR 35.0%
TCGTGATTACCAAACTGAGA+AGG + chr1_4:40006041-40006060 Msa0162720:CDS 40.0%
GAAATTGCGATATGAACCTG+TGG - chr1_4:40006132-40006151 None:intergenic 40.0%
CCGGCAATGTCAATATTGTT+AGG - chr1_4:40006339-40006358 None:intergenic 40.0%
!! ACCTTAGGGATGGTTTTTAG+AGG + chr1_4:40006368-40006387 Msa0162720:intron 40.0%
! TCCTCTAAAAACCATCCCTA+AGG - chr1_4:40006372-40006391 None:intergenic 40.0%
ATGATGTGCGAGTCAATACA+GGG - chr1_4:40006586-40006605 None:intergenic 40.0%
TATGATGTGCGAGTCAATAC+AGG - chr1_4:40006587-40006606 None:intergenic 40.0%
!! TGTATTGACTCGCACATCAT+AGG + chr1_4:40006586-40006605 Msa0162720:intron 40.0%
! TAGGAATTTTTGCTACCTGG+AGG + chr1_4:40006605-40006624 Msa0162720:intron 40.0%
TAAACTGTGTTTGCATAGGG+TGG - chr1_4:40006786-40006805 None:intergenic 40.0%
GTTAACGTTGTTGTCGATGA+TGG + chr1_4:40007006-40007025 Msa0162720:CDS 40.0%
GACTTCTTTGATCCACTAAG+AGG + chr1_4:40007036-40007055 Msa0162720:CDS 40.0%
TTCTTTGATCCACTAAGAGG+AGG + chr1_4:40007039-40007058 Msa0162720:CDS 40.0%
!! TCATTCAAGTTGACAGGTTC+TGG - chr1_4:40007093-40007112 None:intergenic 40.0%
!! GCAACTTCATTCAAGTTGAC+AGG - chr1_4:40007099-40007118 None:intergenic 40.0%
GTCAACTTGAATGAAGTTGC+TGG + chr1_4:40007099-40007118 Msa0162720:CDS 40.0%
CATTAGTAGTCTCCTGAAAG+AGG - chr1_4:40007148-40007167 None:intergenic 40.0%
TTAGTATTTGGGGATGGTTG+AGG + chr1_4:40007278-40007297 Msa0162720:intron 40.0%
ACATTCTTACTTGCCTGCAT+TGG + chr1_4:40007404-40007423 Msa0162720:intron 40.0%
TACTTTATGCAGTCCCTTAG+AGG + chr1_4:40007684-40007703 Msa0162720:intron 40.0%
TGATACGAAAAAGTTTGGGC+TGG + chr1_4:40007845-40007864 Msa0162720:intron 40.0%
!!! TTGGGCTGGCTATATTTTGT+AGG + chr1_4:40007859-40007878 Msa0162720:intron 40.0%
!!! TGTAGGATTATTTTGGGCAG+TGG + chr1_4:40007876-40007895 Msa0162720:intron 40.0%
TAACTCATCCTTGTAAGGTG+AGG - chr1_4:40007999-40008018 None:intergenic 40.0%
GAGACGGGAAAATAGATTCT+AGG - chr1_4:40008283-40008302 None:intergenic 40.0%
!! TTGGATTGGCTATATGAGAC+GGG - chr1_4:40008298-40008317 None:intergenic 40.0%
GAGTAATGACAGAATGACCT+AGG + chr1_4:40008457-40008476 Msa0162720:intron 40.0%
TTTGAAAGGAGTCACGGATA+TGG + chr1_4:40008486-40008505 Msa0162720:intron 40.0%
GATATGGTAGAGCTGAGAAA+TGG + chr1_4:40008502-40008521 Msa0162720:intron 40.0%
TATGGTAGAGCTGAGAAATG+GGG + chr1_4:40008504-40008523 Msa0162720:intron 40.0%
AGCTCCTTACAGATTGAACA+AGG - chr1_4:40008556-40008575 None:intergenic 40.0%
TGGGACAGTGTAAAACAGAT+TGG - chr1_4:40008585-40008604 None:intergenic 40.0%
TCTGTTTAGTGGCTTACAGT+AGG + chr1_4:40008653-40008672 Msa0162720:intron 40.0%
TACTTTATGCAGTCCCTTAG+AGG + chr1_4:40007684-40007703 Msa0162720:intron 40.0%
!! AAACTTTTTGTTTGGGGGGT+GGG - chr1_4:40009268-40009287 None:intergenic 40.0%
CCCCAAACAAAAAGTTTCCA+TGG + chr1_4:40009271-40009290 Msa0162720:intron 40.0%
!! AAGCATGATAATGGCCATTC+CGG - chr1_4:40009310-40009329 None:intergenic 40.0%
AAGTAAACAGCTCGTCACAA+GGG - chr1_4:40009371-40009390 None:intergenic 40.0%
!!! CCCGATGTTTTAATGAGAAG+TGG + chr1_4:40009634-40009653 Msa0162720:CDS 40.0%
! CCCTCATCTGCAAATTTTTG+TGG - chr1_4:40009806-40009825 None:intergenic 40.0%
AAGATGAAATTACCCGGTCT+TGG + chr1_4:40009876-40009895 Msa0162720:CDS 40.0%
CAAAACTGGATTGTAAGGTG+AGG - chr1_4:40010303-40010322 None:intergenic 40.0%
CCTCACAAAACTGGATTGTA+AGG - chr1_4:40010308-40010327 None:intergenic 40.0%
!! CCTTACAATCCAGTTTTGTG+AGG + chr1_4:40010305-40010324 Msa0162720:intron 40.0%
CTAACTCAACCTCACAAAAC+TGG - chr1_4:40010317-40010336 None:intergenic 40.0%
!! CAGTTTTGTGAGGTTGAGTT+AGG + chr1_4:40010315-40010334 Msa0162720:intron 40.0%
AAGTAGTGTTTGTCACCCTT+AGG + chr1_4:40010474-40010493 Msa0162720:intron 40.0%
GGACTTGATTTCAATTGACC+AGG - chr1_4:40010507-40010526 None:intergenic 40.0%
CAATTGAAATCAAGTCCCCA+AGG + chr1_4:40010510-40010529 Msa0162720:intron 40.0%
GGTTTATATGAGTCAACCCT+TGG - chr1_4:40010530-40010549 None:intergenic 40.0%
CCTGAGAGGTTACATAAAGA+AGG - chr1_4:40010865-40010884 None:intergenic 40.0%
CCTTCTTTATGTAACCTCTC+AGG + chr1_4:40010862-40010881 Msa0162720:intron 40.0%
AAGAACTATCCTAACCTGAG+AGG - chr1_4:40010879-40010898 None:intergenic 40.0%
! TTTGCAGGTTGCTAAGCTTT+TGG + chr1_4:40011210-40011229 Msa0162720:intron 40.0%
GTGACAAGGACAAATAGAGT+GGG - chr1_4:40011262-40011281 None:intergenic 40.0%
TGTGACAAGGACAAATAGAG+TGG - chr1_4:40011263-40011282 None:intergenic 40.0%
TGTCCTTGTCACAGATATCA+TGG + chr1_4:40011270-40011289 Msa0162720:CDS 40.0%
TGTCCATGATATCTGTGACA+AGG - chr1_4:40011276-40011295 None:intergenic 40.0%
TGGAACTTTACTCTGCAACT+TGG + chr1_4:40011351-40011370 Msa0162720:CDS 40.0%
GAAAAATCATTAGCACGCTG+CGG - chr1_4:40011457-40011476 None:intergenic 40.0%
GTTTGATGGAAAGAGGGTAA+CGG - chr1_4:40011749-40011768 None:intergenic 40.0%
ATTCACCGCTCTCAAAACTA+GGG + chr1_4:40011811-40011830 Msa0162720:intron 40.0%
!!! ATCAACCCTAGTTTTGAGAG+CGG - chr1_4:40011819-40011838 None:intergenic 40.0%
! CTCTCAAAACTAGGGTTGAT+AGG + chr1_4:40011819-40011838 Msa0162720:intron 40.0%
AATTCACCGCTCTCAAAACT+AGG + chr1_4:40011926-40011945 Msa0162720:intron 40.0%
ATTCACCGCTCTCAAAACTA+GGG + chr1_4:40011811-40011830 Msa0162720:intron 40.0%
!!! ATGAACCCTAGTTTTGAGAG+CGG - chr1_4:40011935-40011954 None:intergenic 40.0%
CTCTCAAAACTAGGGTTCAT+AGG + chr1_4:40011935-40011954 Msa0162720:intron 40.0%
CCATTTAACATTGAGGTGGA+AGG - chr1_4:40012104-40012123 None:intergenic 40.0%
CCTTCCACCTCAATGTTAAA+TGG + chr1_4:40012101-40012120 Msa0162720:intron 40.0%
GTTCACCATTGCTGACATAA+AGG + chr1_4:40012196-40012215 Msa0162720:intron 40.0%
TTGGTCCTTTATGTCAGCAA+TGG - chr1_4:40012204-40012223 None:intergenic 40.0%
CATTAAACTTAAAGGACCCC+AGG + chr1_4:40012264-40012283 Msa0162720:intron 40.0%
TATTAGGCAGAATGCATCCT+GGG - chr1_4:40012284-40012303 None:intergenic 40.0%
TTATTAGGCAGAATGCATCC+TGG - chr1_4:40012285-40012304 None:intergenic 40.0%
TCACAACTTGTCCTGGTATT+TGG - chr1_4:40012409-40012428 None:intergenic 40.0%
ATCATGTTCACAACTTGTCC+TGG - chr1_4:40012416-40012435 None:intergenic 40.0%
TACAAGCCTTCCGCATTTAT+AGG - chr1_4:40012614-40012633 None:intergenic 40.0%
CCCTCTGTAATTATTGTCGT+TGG + chr1_4:40012920-40012939 Msa0162720:intron 40.0%
GCCAACGACAATAATTACAG+AGG - chr1_4:40012924-40012943 None:intergenic 40.0%
GTAGGGACTATGCAAAAACA+AGG + chr1_4:40012957-40012976 Msa0162720:intron 40.0%
TGGATATCCATGCATCATAG+AGG + chr1_4:40013044-40013063 Msa0162720:intron 40.0%
! TGTAATGTTTGAGATGGCGA+GGG - chr1_4:40013169-40013188 None:intergenic 40.0%
! TTGTAATGTTTGAGATGGCG+AGG - chr1_4:40013170-40013189 None:intergenic 40.0%
GATGCAGATGGAAACATGTT+TGG - chr1_4:40013197-40013216 None:intergenic 40.0%
GATTGTCTGCAAGAGATAGT+TGG + chr1_4:40013228-40013247 Msa0162720:intron 40.0%
! GTGCTAACTGCTTATGCTTT+TGG + chr1_4:40013735-40013754 Msa0162720:intron 40.0%
GTCAAAGAACTAGGTCAAAG+AGG - chr1_4:40013791-40013810 None:intergenic 40.0%
TAACTCATCCTTGTAAGGTG+AGG - chr1_4:40007999-40008018 None:intergenic 40.0%
ATGCCATCTCCAAGTAACTA+GGG - chr1_4:40014382-40014401 None:intergenic 40.0%
AATGCCATCTCCAAGTAACT+AGG - chr1_4:40014383-40014402 None:intergenic 40.0%
! GTGATGATGACAAGAGGATT+AGG + chr1_4:40014458-40014477 Msa0162720:CDS 40.0%
AAGCTTCCATCACATGACAT+AGG + chr1_4:40014533-40014552 Msa0162720:CDS 40.0%
ATGAATTGTGCAACTGGAAC+AGG + chr1_4:40014715-40014734 Msa0162720:intron 40.0%
AGTACTTTCATTGGCAGCTA+AGG - chr1_4:40014788-40014807 None:intergenic 40.0%
GCTGGAGCGAAATTCAAAAT+GGG - chr1_4:40015088-40015107 None:intergenic 40.0%
! CATTTTGAATTTCGCTCCAG+CGG + chr1_4:40015087-40015106 Msa0162720:intron 40.0%
GCATAACACAGGATAAAGAC+GGG - chr1_4:40015299-40015318 None:intergenic 40.0%
CAAGGATACTTCCTTTCATC+AGG + chr1_4:40015511-40015530 Msa0162720:CDS 40.0%
GCAAATGCAAACCTGATGAA+AGG - chr1_4:40015525-40015544 None:intergenic 40.0%
CACCTGAATTACAGATTGCT+TGG + chr1_4:40015639-40015658 Msa0162720:CDS 40.0%
ACCCAAGCAATCTGTAATTC+AGG - chr1_4:40015644-40015663 None:intergenic 40.0%
ATTACAGATTGCTTGGGTTC+AGG + chr1_4:40015646-40015665 Msa0162720:CDS 40.0%
!! CAGCATTGACAATGTTAACC+GGG - chr1_4:40015689-40015708 None:intergenic 40.0%
! TATCTACACCTTTGGGGAAA+TGG + chr1_4:40015855-40015874 Msa0162720:intron 40.0%
!! TTTGTTGTTTCCTCTAGTGG+TGG + chr1_4:40015887-40015906 Msa0162720:intron 40.0%
!! TTGTTGTTTCCTCTAGTGGT+GGG + chr1_4:40015888-40015907 Msa0162720:intron 40.0%
AATAGAGGAAGGCAAAAGAC+CGG + chr1_4:40015977-40015996 Msa0162720:intron 40.0%
AGCATGCATAGATTGTTGGT+TGG + chr1_4:40016362-40016381 Msa0162720:intron 40.0%
! GCATGCATAGATTGTTGGTT+GGG + chr1_4:40016363-40016382 Msa0162720:intron 40.0%
! TGGGGGTTGATTCTATTTCT+AGG + chr1_4:40016610-40016629 Msa0162720:intron 40.0%
TGTAAGATCACCCAAACTCA+GGG + chr1_4:40016794-40016813 Msa0162720:intron 40.0%
! CAGACTATCATTTTACCTCC+AGG + chr1_4:40016951-40016970 Msa0162720:intron 40.0%
TACTCATCAAGACTCTCGTA+CGG - chr1_4:40017022-40017041 None:intergenic 40.0%
GAGATTTATCTGCTCCTTGA+TGG + chr1_4:40017413-40017432 Msa0162720:intron 40.0%
GAGTGAAAGGTAGCTTGATT+GGG - chr1_4:40017462-40017481 None:intergenic 40.0%
AGAGTGAAAGGTAGCTTGAT+TGG - chr1_4:40017463-40017482 None:intergenic 40.0%
!! TCTGTCTCATTTTGAGTGTC+TGG + chr1_4:40017660-40017679 Msa0162720:CDS 40.0%
GAAAGCAAGTGTATGCTTGT+CGG - chr1_4:40018135-40018154 None:intergenic 40.0%
GAGAATTGTCGCTAATTGCT+AGG + chr1_4:40018315-40018334 Msa0162720:intron 40.0%
GGAATCCCATTTAGCATTTC+TGG + chr1_4:40018357-40018376 Msa0162720:CDS 40.0%
! GTTGATTGCCGAGCAAATTT+TGG + chr1_4:40018379-40018398 Msa0162720:CDS 40.0%
TGGTAGATTCAACGAGCTTA+AGG + chr1_4:40018399-40018418 Msa0162720:CDS 40.0%
AACTTACCCTTGTAATGCAC+GGG - chr1_4:40018531-40018550 None:intergenic 40.0%
TTTCAGTGGTTGGCAACATA+AGG - chr1_4:40018592-40018611 None:intergenic 40.0%
ATGTTGCCAACCACTGAAAT+AGG + chr1_4:40018593-40018612 Msa0162720:intron 40.0%
!! AATGGAATAGTGGGTTGGAA+TGG - chr1_4:40018629-40018648 None:intergenic 40.0%
!! AATGGAATGGAATAGTGGGT+TGG - chr1_4:40018634-40018653 None:intergenic 40.0%
TGGTGTTCCGTTGTCAAAAA+TGG - chr1_4:40018652-40018671 None:intergenic 40.0%
! TATACTCGTAAGAGCATGTC+TGG - chr1_4:40018744-40018763 None:intergenic 40.0%
CACATGTTTGTAAATAGCCC+CGG + chr1_4:40018820-40018839 Msa0162720:intron 40.0%
GTCACAATACCTTCTATCTC+TGG + chr1_4:40018980-40018999 Msa0162720:CDS 40.0%
!! TCTTTTTCTAGAGACTGCAG+AGG + chr1_4:40019018-40019037 Msa0162720:CDS 40.0%
!!! GAGGTTGGTATGAGTGTTTT+TGG + chr1_4:40019037-40019056 Msa0162720:intron 40.0%
!! TTTCAGGTTGCATTCTTAGG+GGG + chr1_4:40019116-40019135 Msa0162720:intron 40.0%
AAATGTTCACCCAACCAATG+TGG + chr1_4:40019215-40019234 Msa0162720:intron 40.0%
CTTAGTACTTCCACATTGGT+TGG - chr1_4:40019228-40019247 None:intergenic 40.0%
GGTTCTTAGTACTTCCACAT+TGG - chr1_4:40019232-40019251 None:intergenic 40.0%
TGTTTCTTGTGGCATGTTTG+TGG + chr1_4:40019279-40019298 Msa0162720:intron 40.0%
GTTTCTTGTGGCATGTTTGT+GGG + chr1_4:40019280-40019299 Msa0162720:intron 40.0%
TGGCGAAAAATAGGTTTAGG+TGG + chr1_4:40019415-40019434 Msa0162720:intron 40.0%
AACAGATTGTGCCCATGATT+GGG - chr1_4:40020079-40020098 None:intergenic 40.0%
TATAAGGACAGTTACTTGGG+AGG - chr1_4:40020317-40020336 None:intergenic 40.0%
! ACAAAGAAGTGGGCTCTAAT+AGG - chr1_4:40020351-40020370 None:intergenic 40.0%
AGGAACTTGCAACTCAACAA+GGG - chr1_4:40020389-40020408 None:intergenic 40.0%
AAGGAACTTGCAACTCAACA+AGG - chr1_4:40020390-40020409 None:intergenic 40.0%
! TCTAAAACAGAAAGGGAAGG+TGG - chr1_4:40020570-40020589 None:intergenic 40.0%
!!! TAGGGATTTTGAGTTAGGGT+TGG + chr1_4:40020605-40020624 Msa0162720:intron 40.0%
TTGTGAAGTAGAACCAACCT+GGG - chr1_4:40020666-40020685 None:intergenic 40.0%
ATTGTGAAGTAGAACCAACC+TGG - chr1_4:40020667-40020686 None:intergenic 40.0%
TGGATGAGGGGGAAAATTTA+GGG - chr1_4:40020838-40020857 None:intergenic 40.0%
ATGGATGAGGGGGAAAATTT+AGG - chr1_4:40020839-40020858 None:intergenic 40.0%
ATGCTGAATTGCATGGATGA+GGG - chr1_4:40020851-40020870 None:intergenic 40.0%
AAAGGAGATGCTGAATTGCA+TGG - chr1_4:40020858-40020877 None:intergenic 40.0%
! TGATACCGTGTTGTGTGTTT+TGG + chr1_4:40020903-40020922 Msa0162720:intron 40.0%
TTGAAAATCAGAGGTCTTGG+AGG - chr1_4:40020965-40020984 None:intergenic 40.0%
GGTTTGAAAATCAGAGGTCT+TGG - chr1_4:40020968-40020987 None:intergenic 40.0%
!! GCTATGACAGTTGATAGAAC+TGG + chr1_4:40021058-40021077 Msa0162720:intron 40.0%
GAATGGATACAGAGGAAATG+AGG + chr1_4:40021154-40021173 Msa0162720:intron 40.0%
! TCTTTAGAAAGAAGCCATGG+TGG - chr1_4:40021354-40021373 None:intergenic 40.0%
GAACTCCAACTGATGTTGAA+GGG + chr1_4:40021455-40021474 Msa0162720:CDS 40.0%
AGCTTCTTAATTATGGTCCC+AGG + chr1_4:40021505-40021524 Msa0162720:CDS 40.0%
AGATATGAGAAGGGGCTAAA+AGG - chr1_4:40021655-40021674 None:intergenic 40.0%
!!! ATTTTTGGGTCAAACCTGCA+CGG - chr1_4:40021867-40021886 None:intergenic 40.0%
TTGACCCAAAAATGAGGACA+CGG + chr1_4:40021874-40021893 Msa0162720:CDS 40.0%
GCCATATCATGCAAATACAC+AGG + chr1_4:40021947-40021966 Msa0162720:CDS 40.0%
!! AAACGCATTACTCTGGAGTT+TGG - chr1_4:40022089-40022108 None:intergenic 40.0%
CCCAAATAAACGCATTACTC+TGG - chr1_4:40022096-40022115 None:intergenic 40.0%
!!! AGGGTTTTGGATAATGAAGG+AGG + chr1_4:40022130-40022149 Msa0162720:intron 40.0%
!!! GGGTTTTGGATAATGAAGGA+GGG + chr1_4:40022131-40022150 Msa0162720:intron 40.0%
CCCAAATCACGCATTAGTTA+TGG - chr1_4:40023025-40023044 None:intergenic 40.0%
!! GAGTCTGATAGAAGTACTCT+CGG + chr1_4:40023132-40023151 Msa0162720:intron 40.0%
!! AGTCTGATAGAAGTACTCTC+GGG + chr1_4:40023133-40023152 Msa0162720:intron 40.0%
! CATCACGGGTCAAACTTTTA+TGG - chr1_4:40023365-40023384 None:intergenic 40.0%
TGCCAAACAAGAAACATCAC+GGG - chr1_4:40023379-40023398 None:intergenic 40.0%
CTGCCAAACAAGAAACATCA+CGG - chr1_4:40023380-40023399 None:intergenic 40.0%
AATCAGTGTAAGGCAAGTAG+AGG - chr1_4:40023419-40023438 None:intergenic 40.0%
TCTACTTGCCTTACACTGAT+TGG + chr1_4:40023418-40023437 Msa0162720:CDS 40.0%
! AAGCAATTGCCAGATTTTGC+AGG + chr1_4:40023505-40023524 Msa0162720:CDS 40.0%
! AGCAATTGCCAGATTTTGCA+GGG + chr1_4:40023506-40023525 Msa0162720:CDS 40.0%
TTCAGCGATGAGAAGAAAGC+TGG - chr1_4:40005992-40006011 None:intergenic 45.0%
CGTGAGATTCCTTCTCAGTT+TGG - chr1_4:40006053-40006072 None:intergenic 45.0%
TCCCTAAGGTCTATCTCAAC+CGG - chr1_4:40006358-40006377 None:intergenic 45.0%
GTTGAGATAGACCTTAGGGA+TGG + chr1_4:40006358-40006377 Msa0162720:intron 45.0%
GAAACTTGGTATCCAGCACA+AGG + chr1_4:40006499-40006518 Msa0162720:intron 45.0%
TTCAATTGAACCCTCGCATG+TGG - chr1_4:40006551-40006570 None:intergenic 45.0%
GTCTCATGTTCAAATCCTCC+AGG - chr1_4:40006623-40006642 None:intergenic 45.0%
CAATTGAAATGAACCCCCAG+GGG - chr1_4:40006703-40006722 None:intergenic 45.0%
CCAATTGAAATGAACCCCCA+GGG - chr1_4:40006704-40006723 None:intergenic 45.0%
TCCAATTGAAATGAACCCCC+AGG - chr1_4:40006705-40006724 None:intergenic 45.0%
!! TCAAGTTGACAGGTTCTGGA+GGG - chr1_4:40007089-40007108 None:intergenic 45.0%
!! TTCAAGTTGACAGGTTCTGG+AGG - chr1_4:40007090-40007109 None:intergenic 45.0%
AAAGAGGTCCACTCCTTCAT+TGG - chr1_4:40007132-40007151 None:intergenic 45.0%
TCAGGAGACTACTAATGCAG+AGG + chr1_4:40007151-40007170 Msa0162720:CDS 45.0%
AGTGAAACCATCTTCGAGAC+AGG - chr1_4:40007180-40007199 None:intergenic 45.0%
TGGGGATGGTTGAGGATAAA+TGG + chr1_4:40007286-40007305 Msa0162720:intron 45.0%
TTTCCAGCCCTAATACACAG+CGG - chr1_4:40007473-40007492 None:intergenic 45.0%
TGGACCTATGTGGTGAATAG+TGG + chr1_4:40007806-40007825 Msa0162720:intron 45.0%
ACAGTATGTGACTCTCATCC+AGG - chr1_4:40007910-40007929 None:intergenic 45.0%
GAGACTTACCTCACCTTACA+AGG + chr1_4:40007988-40008007 Msa0162720:intron 45.0%
TCCTTCCATATGAGCCACAA+AGG - chr1_4:40008122-40008141 None:intergenic 45.0%
GATGGTATTAGAGCCTGAAG+TGG + chr1_4:40008323-40008342 Msa0162720:intron 45.0%
GAGGTGCATATCATGATTGG+AGG + chr1_4:40008402-40008421 Msa0162720:intron 45.0%
CGATGGACGATTGCATCAAT+GGG - chr1_4:40008604-40008623 None:intergenic 45.0%
TGGACCTATGTGGTGAATAG+TGG + chr1_4:40007806-40007825 Msa0162720:intron 45.0%
! GAAAAAGTTTGGGATGGCTG+AGG + chr1_4:40008799-40008818 Msa0162720:intron 45.0%
TTTCCAGCCCTAATACACAG+CGG - chr1_4:40007473-40007492 None:intergenic 45.0%
!! AACTTTTTGTTTGGGGGGTG+GGG - chr1_4:40009267-40009286 None:intergenic 45.0%
!! GAAACTTTTTGTTTGGGGGG+TGG - chr1_4:40009269-40009288 None:intergenic 45.0%
CCATGGTAAAGAACATGGTC+CGG + chr1_4:40009288-40009307 Msa0162720:intron 45.0%
GTAAAGAACATGGTCCGGAA+TGG + chr1_4:40009293-40009312 Msa0162720:intron 45.0%
CAAGTAAACAGCTCGTCACA+AGG - chr1_4:40009372-40009391 None:intergenic 45.0%
GTCTTCAACAAGTATGCACC+TGG + chr1_4:40009766-40009785 Msa0162720:CDS 45.0%
TTCAACAAGTATGCACCTGG+AGG + chr1_4:40009769-40009788 Msa0162720:CDS 45.0%
!! ATTTGCAGATGAGGGTGTCA+AGG + chr1_4:40009811-40009830 Msa0162720:CDS 45.0%
! AGGGTGTCAAGGTGATTACT+TGG + chr1_4:40009822-40009841 Msa0162720:CDS 45.0%
TGTCAAGGTGATTACTTGGC+AGG + chr1_4:40009826-40009845 Msa0162720:CDS 45.0%
CAGATGCTCGGATAGAAGTT+AGG + chr1_4:40010176-40010195 Msa0162720:intron 45.0%
AGAGAGCAAGGGAAAAACAC+AGG - chr1_4:40010402-40010421 None:intergenic 45.0%
! GTGTTTTTCCCTTGCTCTCT+AGG + chr1_4:40010402-40010421 Msa0162720:intron 45.0%
! ACTTTTCCAACACACCTCCT+TGG - chr1_4:40010429-40010448 None:intergenic 45.0%
GCTTTATGCGTTTCCAAACC+AGG - chr1_4:40011309-40011328 None:intergenic 45.0%
ACTTTACTCTGCAACTTGGC+AGG + chr1_4:40011355-40011374 Msa0162720:CDS 45.0%
CTGTATACAACTGGGTCACT+TGG + chr1_4:40011566-40011585 Msa0162720:intron 45.0%
GATTCACCGCTCTCAAAACT+AGG + chr1_4:40011810-40011829 Msa0162720:intron 45.0%
TGAGAGCGGTGAATTTGAAC+CGG - chr1_4:40011921-40011940 None:intergenic 45.0%
ATTAGGCAGAATGCATCCTG+GGG - chr1_4:40012283-40012302 None:intergenic 45.0%
TCAGTTTCCAGCCAAATACC+AGG + chr1_4:40012395-40012414 Msa0162720:intron 45.0%
AACTTGTCCTGGTATTTGGC+TGG - chr1_4:40012405-40012424 None:intergenic 45.0%
TTACAGAGGGATGTGGGAAA+GGG - chr1_4:40012910-40012929 None:intergenic 45.0%
ATTACAGAGGGATGTGGGAA+AGG - chr1_4:40012911-40012930 None:intergenic 45.0%
TTGCACTCCTCTATGATGCA+TGG - chr1_4:40013054-40013073 None:intergenic 45.0%
! CTGCAAGAGATAGTTGGTCT+TGG + chr1_4:40013234-40013253 Msa0162720:intron 45.0%
GTTAAATAGAGGGAGGGAGA+AGG - chr1_4:40013415-40013434 None:intergenic 45.0%
GCATCACCAGCAAAGAAGAA+TGG - chr1_4:40013679-40013698 None:intergenic 45.0%
GAGACTTACCTCACCTTACA+AGG + chr1_4:40007988-40008007 Msa0162720:intron 45.0%
TCCTTCCATATGAGCCACAA+AGG - chr1_4:40008122-40008141 None:intergenic 45.0%
GTACCCTAGTTACTTGGAGA+TGG + chr1_4:40014376-40014395 Msa0162720:intron 45.0%
AGATGGCATTATTGCCTTGC+TGG + chr1_4:40014393-40014412 Msa0162720:CDS 45.0%
TTGTCATCATCACCAAGCGT+TGG - chr1_4:40014451-40014470 None:intergenic 45.0%
AAGAGGATTAGGAGATCCAG+TGG + chr1_4:40014469-40014488 Msa0162720:CDS 45.0%
!! GCTGCCAATGAAAGTACTCT+TGG + chr1_4:40014790-40014809 Msa0162720:CDS 45.0%
! ACTCAATGGTTGGTTCCATC+AGG - chr1_4:40014849-40014868 None:intergenic 45.0%
CGCTGGAGCGAAATTCAAAA+TGG - chr1_4:40015089-40015108 None:intergenic 45.0%
GATAAAGACGGGAGAAAGCA+GGG - chr1_4:40015288-40015307 None:intergenic 45.0%
TTGGGTTCAGGCTGTATGAA+GGG + chr1_4:40015658-40015677 Msa0162720:CDS 45.0%
ATAGAGGAAGGCAAAAGACC+GGG + chr1_4:40015978-40015997 Msa0162720:intron 45.0%
TGACATCAACTAAGATCGCC+CGG - chr1_4:40015999-40016018 None:intergenic 45.0%
! TGTATGCATGTATGGGCTGT+AGG + chr1_4:40016400-40016419 Msa0162720:intron 45.0%
GTGTAAGATCACCCAAACTC+AGG + chr1_4:40016793-40016812 Msa0162720:intron 45.0%
!! CTTAGTTCTGCCCTGAGTTT+GGG - chr1_4:40016807-40016826 None:intergenic 45.0%
!! ACTTAGTTCTGCCCTGAGTT+TGG - chr1_4:40016808-40016827 None:intergenic 45.0%
ACTCATCAAGACTCTCGTAC+GGG - chr1_4:40017021-40017040 None:intergenic 45.0%
CATAAGCATCTACGACACTC+AGG - chr1_4:40017045-40017064 None:intergenic 45.0%
ACTACTCTCGTCCATATCAC+AGG + chr1_4:40017186-40017205 Msa0162720:intron 45.0%
CTACTCTCGTCCATATCACA+GGG + chr1_4:40017187-40017206 Msa0162720:intron 45.0%
AGCTTGATTGGGACCTAAAC+TGG - chr1_4:40017451-40017470 None:intergenic 45.0%
ATTTCAGAGCGTGCTTCGAA+CGG + chr1_4:40017586-40017605 Msa0162720:CDS 45.0%
GTCAAGCTTGCAATCTCTCT+TGG + chr1_4:40017630-40017649 Msa0162720:CDS 45.0%
ACATCCTTAATATGGCGACG+AGG + chr1_4:40017881-40017900 Msa0162720:CDS 45.0%
AGTACCTCGTCGCCATATTA+AGG - chr1_4:40017888-40017907 None:intergenic 45.0%
GCATCCACCGAATGAAAAGT+TGG - chr1_4:40018032-40018051 None:intergenic 45.0%
TGAGCAGGAGTGGTCATATT+AGG + chr1_4:40018106-40018125 Msa0162720:intron 45.0%
GAGCAGGAGTGGTCATATTA+GGG + chr1_4:40018107-40018126 Msa0162720:intron 45.0%
!! TAAGGATGATGATGGGCAAG+TGG + chr1_4:40018197-40018216 Msa0162720:CDS 45.0%
AGTATCTCGCTTTGTGCACA+TGG + chr1_4:40018227-40018246 Msa0162720:CDS 45.0%
GGTAGATTATGGAACGGAGA+TGG + chr1_4:40018336-40018355 Msa0162720:intron 45.0%
GACTTCGCTAAATGTGACAC+AGG - chr1_4:40018963-40018982 None:intergenic 45.0%
TGTCTCTGACCAGAGATAGA+AGG - chr1_4:40018992-40019011 None:intergenic 45.0%
! TTTCTAGAGACTGCAGAGGT+TGG + chr1_4:40019022-40019041 Msa0162720:intron 45.0%
! GGCTTGGTTTCTCATGTAGA+TGG + chr1_4:40019137-40019156 Msa0162720:CDS 45.0%
TCAGGAATTGGCTGTTTGCA+TGG + chr1_4:40019170-40019189 Msa0162720:CDS 45.0%
AGTAAGGAGAGTCGATCAGA+TGG + chr1_4:40019473-40019492 Msa0162720:intron 45.0%
AGTCAAATCACTAGAGGCAG+AGG + chr1_4:40019501-40019520 Msa0162720:intron 45.0%
! AAGCCTTTTCCCACTAAGTG+GGG - chr1_4:40019641-40019660 None:intergenic 45.0%
! CAAGCCTTTTCCCACTAAGT+GGG - chr1_4:40019642-40019661 None:intergenic 45.0%
! GAATCGGCCATTGTCTTTTC+GGG - chr1_4:40019961-40019980 None:intergenic 45.0%
! CGAATCGGCCATTGTCTTTT+CGG - chr1_4:40019962-40019981 None:intergenic 45.0%
!! TGGCCGATTCGTGTTAACAA+TGG + chr1_4:40019971-40019990 Msa0162720:intron 45.0%
AAAAGTCTCATGAGTCGCTG+CGG - chr1_4:40020011-40020030 None:intergenic 45.0%
TCAGCAGCTTTCCCAATCAT+GGG + chr1_4:40020065-40020084 Msa0162720:intron 45.0%
GAACAGATTGTGCCCATGAT+TGG - chr1_4:40020080-40020099 None:intergenic 45.0%
ACTCAACAAGGGGGATATCT+TGG - chr1_4:40020378-40020397 None:intergenic 45.0%
GAACTTGCAACTCAACAAGG+GGG - chr1_4:40020387-40020406 None:intergenic 45.0%
GGAACTTGCAACTCAACAAG+GGG - chr1_4:40020388-40020407 None:intergenic 45.0%
ATGCTCAAAGAGTCGCTGAA+AGG - chr1_4:40020409-40020428 None:intergenic 45.0%
TTGAACTCAGGACCACTCAA+AGG - chr1_4:40020529-40020548 None:intergenic 45.0%
AAAACAGAAAGGGAAGGTGG+CGG - chr1_4:40020567-40020586 None:intergenic 45.0%
!! GGGTTGGTTGAAACTTCTCA+AGG + chr1_4:40020621-40020640 Msa0162720:intron 45.0%
TTCTCAGGGGACAATGCATT+TGG - chr1_4:40020798-40020817 None:intergenic 45.0%
AATGCATTGTCCCCTGAGAA+TGG + chr1_4:40020798-40020817 Msa0162720:intron 45.0%
TGCTGAATTGCATGGATGAG+GGG - chr1_4:40020850-40020869 None:intergenic 45.0%
GATGCTGAATTGCATGGATG+AGG - chr1_4:40020852-40020871 None:intergenic 45.0%
ACAACACGGTATCACAGTAC+AGG - chr1_4:40020897-40020916 None:intergenic 45.0%
AAATCAGAGGTCTTGGAGGA+AGG - chr1_4:40020961-40020980 None:intergenic 45.0%
TTACGACAGTGAGATGGAGA+AGG + chr1_4:40021179-40021198 Msa0162720:intron 45.0%
! TCGCACTTTTCTTTTCCGAG+AGG + chr1_4:40021230-40021249 Msa0162720:intron 45.0%
!! GTTGTTTTGCTCGATCATGC+AGG + chr1_4:40021427-40021446 Msa0162720:intron 45.0%
CGAACTCCAACTGATGTTGA+AGG + chr1_4:40021454-40021473 Msa0162720:CDS 45.0%
ACTAGCCCTTCAACATCAGT+TGG - chr1_4:40021463-40021482 None:intergenic 45.0%
GGAGACCTCCCTTAAAAAAG+AGG - chr1_4:40021578-40021597 None:intergenic 45.0%
GAAGTAGGTAACTGGTACAC+TGG - chr1_4:40021719-40021738 None:intergenic 45.0%
CATTGATCAGCTCCCAATCA+TGG + chr1_4:40021755-40021774 Msa0162720:CDS 45.0%
ATGAATTGGAAATCCCGTGC+AGG + chr1_4:40021850-40021869 Msa0162720:intron 45.0%
!!! TTTTTGGGTCAAACCTGCAC+GGG - chr1_4:40021866-40021885 None:intergenic 45.0%
GCAGGTTTGACCCAAAAATG+AGG + chr1_4:40021868-40021887 Msa0162720:intron 45.0%
ATACAACATAAGGCAAGGCG+AGG - chr1_4:40021978-40021997 None:intergenic 45.0%
TCATTGCCTGGTATCTGGAA+AGG - chr1_4:40022621-40022640 None:intergenic 45.0%
ACATGTCATTGCCTGGTATC+TGG - chr1_4:40022626-40022645 None:intergenic 45.0%
! GAACTTACTTTGTGCCGTTC+AGG + chr1_4:40022707-40022726 Msa0162720:CDS 45.0%
CTGAGAAGGTTCTTCCTGAA+CGG - chr1_4:40022724-40022743 None:intergenic 45.0%
CATACTGGAGATACCTGAGA+AGG - chr1_4:40022738-40022757 None:intergenic 45.0%
CTTCTCAGGTATCTCCAGTA+TGG + chr1_4:40022736-40022755 Msa0162720:intron 45.0%
GACCCGTGATGTTTCTTGTT+TGG + chr1_4:40023374-40023393 Msa0162720:intron 45.0%
TGGCTGTTCCAATCAGTGTA+AGG - chr1_4:40023429-40023448 None:intergenic 45.0%
TTGGGCACTCAAACATGACT+TGG - chr1_4:40023449-40023468 None:intergenic 45.0%
! CAAGTTGAATGGTTGACTGG+AGG - chr1_4:40023480-40023499 None:intergenic 45.0%
! GCAATTGCCAGATTTTGCAG+GGG + chr1_4:40023507-40023526 Msa0162720:CDS 45.0%
!!! TTAATTATCAAATATTTTTA+AGG + chr1_4:40007584-40007603 Msa0162720:intron 5.0%
!!! TTAATTATCAAATATTTTTA+AGG + chr1_4:40007584-40007603 Msa0162720:intron 5.0%
TTGCGATATGAACCTGTGGG+AGG - chr1_4:40006128-40006147 None:intergenic 50.0%
! TGCCGGTTGAGATAGACCTT+AGG + chr1_4:40006353-40006372 Msa0162720:intron 50.0%
GCCGGTTGAGATAGACCTTA+GGG + chr1_4:40006354-40006373 Msa0162720:intron 50.0%
ATTGAACCCTCGCATGTGGA+TGG - chr1_4:40006547-40006566 None:intergenic 50.0%
CCCTGGGGGTTCATTTCAAT+TGG + chr1_4:40006701-40006720 Msa0162720:intron 50.0%
TGCTGGTGATCCACCAATGA+AGG + chr1_4:40007116-40007135 Msa0162720:CDS 50.0%
GTGATCCACCAATGAAGGAG+TGG + chr1_4:40007121-40007140 Msa0162720:CDS 50.0%
TGAAGGAGTGGACCTCTTTC+AGG + chr1_4:40007133-40007152 Msa0162720:CDS 50.0%
GAGGTTTCCTGTCTCGAAGA+TGG + chr1_4:40007170-40007189 Msa0162720:CDS 50.0%
GTAGTATTTGGGGATGGCTG+AGG + chr1_4:40007308-40007327 Msa0162720:intron 50.0%
AGGGTCAACCGCTGTGTATT+AGG + chr1_4:40007462-40007481 Msa0162720:intron 50.0%
GGGTCAACCGCTGTGTATTA+GGG + chr1_4:40007463-40007482 Msa0162720:intron 50.0%
GCTTGCCTTTGTGGCTCATA+TGG + chr1_4:40008114-40008133 Msa0162720:intron 50.0%
GCCTTTGTGGCTCATATGGA+AGG + chr1_4:40008118-40008137 Msa0162720:intron 50.0%
GGTATTAGAGCCTGAAGTGG+AGG + chr1_4:40008326-40008345 Msa0162720:intron 50.0%
! CTGAAGTGGAGGAAGAGTGT+GGG + chr1_4:40008337-40008356 Msa0162720:intron 50.0%
GCATATCATGATTGGAGGCG+AGG + chr1_4:40008407-40008426 Msa0162720:intron 50.0%
GAAATGGGGTCTCAGTCTCT+AGG + chr1_4:40008518-40008537 Msa0162720:intron 50.0%
GCGATGGACGATTGCATCAA+TGG - chr1_4:40008605-40008624 None:intergenic 50.0%
TCCATCGCTCTGCTTCATCA+GGG + chr1_4:40008617-40008636 Msa0162720:intron 50.0%
AGGGTCAACCGCTGTGTATT+AGG + chr1_4:40007462-40007481 Msa0162720:intron 50.0%
GGGTCAACCGCTGTGTATTA+GGG + chr1_4:40007463-40007482 Msa0162720:intron 50.0%
!! ACTTTTTGTTTGGGGGGTGG+GGG - chr1_4:40009266-40009285 None:intergenic 50.0%
CCGGACCATGTTCTTTACCA+TGG - chr1_4:40009291-40009310 None:intergenic 50.0%
! GTGGATCATCTAGTTCCTCC+AGG - chr1_4:40009787-40009806 None:intergenic 50.0%
TCCTTGGACCTAGAGAGCAA+GGG - chr1_4:40010413-40010432 None:intergenic 50.0%
TGACCAGGAAGCTGACCTAA+GGG - chr1_4:40010492-40010511 None:intergenic 50.0%
TTGACCAGGAAGCTGACCTA+AGG - chr1_4:40010493-40010512 None:intergenic 50.0%
! GCAGGTTGCTAAGCTTTTGG+TGG + chr1_4:40011213-40011232 Msa0162720:intron 50.0%
ACATGATTGGGGACCTGGTT+TGG + chr1_4:40011293-40011312 Msa0162720:CDS 50.0%
TACAGAGGGATGTGGGAAAG+GGG - chr1_4:40012909-40012928 None:intergenic 50.0%
TGTCGTTGGCAAGTACTCTG+AGG + chr1_4:40012934-40012953 Msa0162720:intron 50.0%
GTCGTTGGCAAGTACTCTGA+GGG + chr1_4:40012935-40012954 Msa0162720:intron 50.0%
! TTGGCAAGTACTCTGAGGGT+AGG + chr1_4:40012939-40012958 Msa0162720:intron 50.0%
! TGGCAAGTACTCTGAGGGTA+GGG + chr1_4:40012940-40012959 Msa0162720:intron 50.0%
! CGAGGGCCTTCATTTGAGTT+AGG - chr1_4:40013152-40013171 None:intergenic 50.0%
CAGCTAGTATGCGATGCAGA+TGG - chr1_4:40013209-40013228 None:intergenic 50.0%
GCTTGCCTTTGTGGCTCATA+TGG + chr1_4:40008114-40008133 Msa0162720:intron 50.0%
GCCTTTGTGGCTCATATGGA+AGG + chr1_4:40008118-40008137 Msa0162720:intron 50.0%
!! AAGCGTTGGAGACTGTCTGT+AGG - chr1_4:40014437-40014456 None:intergenic 50.0%
TACAGACAGTCTCCAACGCT+TGG + chr1_4:40014436-40014455 Msa0162720:CDS 50.0%
!! CGCTTGGTGATGATGACAAG+AGG + chr1_4:40014452-40014471 Msa0162720:CDS 50.0%
AGCATTCTCTCTTGAACCGC+TGG - chr1_4:40015106-40015125 None:intergenic 50.0%
AGCGGTTCAAGAGAGAATGC+TGG + chr1_4:40015105-40015124 Msa0162720:intron 50.0%
GGATAAAGACGGGAGAAAGC+AGG - chr1_4:40015289-40015308 None:intergenic 50.0%
CTTGGGTTCAGGCTGTATGA+AGG + chr1_4:40015657-40015676 Msa0162720:CDS 50.0%
GCTGTATGAAGGGAAATGCC+CGG + chr1_4:40015668-40015687 Msa0162720:CDS 50.0%
GATGCACCCGTGCATTACAA+GGG + chr1_4:40018522-40018541 Msa0162720:intron 50.0%
! CTTTTCCCACTAAGTGGGGT+CGG - chr1_4:40019637-40019656 None:intergenic 50.0%
! CCAAGCCTTTTCCCACTAAG+TGG - chr1_4:40019643-40019662 None:intergenic 50.0%
CCACTTAGTGGGAAAAGGCT+TGG + chr1_4:40019640-40019659 Msa0162720:intron 50.0%
!! GAAAGGCATTGCATCCACCT+AGG + chr1_4:40019927-40019946 Msa0162720:intron 50.0%
GGAGGAACCCGAAAAGACAA+TGG + chr1_4:40019951-40019970 Msa0162720:intron 50.0%
AAAGTCTCATGAGTCGCTGC+GGG - chr1_4:40020010-40020029 None:intergenic 50.0%
CTCAGCAGCTTTCCCAATCA+TGG + chr1_4:40020064-40020083 Msa0162720:intron 50.0%
! CAAGGGAGAGTGTGGTCAAA+GGG - chr1_4:40020129-40020148 None:intergenic 50.0%
! ACAAGGGAGAGTGTGGTCAA+AGG - chr1_4:40020130-40020149 None:intergenic 50.0%
AAGTCATGTCCATGCTGCTG+TGG + chr1_4:40020277-40020296 Msa0162720:intron 50.0%
AGTCATGTCCATGCTGCTGT+GGG + chr1_4:40020278-40020297 Msa0162720:intron 50.0%
AACTCAGGACCACTCAAAGG+AGG - chr1_4:40020526-40020545 None:intergenic 50.0%
! ACTTCTCAAGGAGTGCACCA+AGG + chr1_4:40020633-40020652 Msa0162720:intron 50.0%
TGCACCAAGGAATTCATCCC+AGG + chr1_4:40020646-40020665 Msa0162720:intron 50.0%
CCAACCTGGGATGAATTCCT+TGG - chr1_4:40020653-40020672 None:intergenic 50.0%
CCAAGGAATTCATCCCAGGT+TGG + chr1_4:40020650-40020669 Msa0162720:intron 50.0%
CAGGGGACAATGCATTTGGA+TGG - chr1_4:40020794-40020813 None:intergenic 50.0%
GCTGAATTGCATGGATGAGG+GGG - chr1_4:40020849-40020868 None:intergenic 50.0%
GAGGGATTACGACAGTGAGA+TGG + chr1_4:40021173-40021192 Msa0162720:intron 50.0%
!! GTGCACTGATTATGCCACCA+TGG + chr1_4:40021337-40021356 Msa0162720:intron 50.0%
CGTTCAGGAAGAACCTTCTC+AGG + chr1_4:40022722-40022741 Msa0162720:CDS 50.0%
GCTAAATTGAAGGCTGCTCG+AGG + chr1_4:40022815-40022834 Msa0162720:intron 50.0%
!! TGACTGGAGGCATCTGTCTT+GGG - chr1_4:40023467-40023486 None:intergenic 50.0%
!! TTGACTGGAGGCATCTGTCT+TGG - chr1_4:40023468-40023487 None:intergenic 50.0%
GAAATGGCCCCTGCAAAATC+TGG - chr1_4:40023517-40023536 None:intergenic 50.0%
AGGAGAGAGGGGATGAGCAT+CGG - chr1_4:40006094-40006113 None:intergenic 55.0%
AGTGAAGGTGGAGGAGAGAG+GGG - chr1_4:40006105-40006124 None:intergenic 55.0%
GAGTGAAGGTGGAGGAGAGA+GGG - chr1_4:40006106-40006125 None:intergenic 55.0%
TGAACCTGTGGGAGGAGTGA+AGG - chr1_4:40006120-40006139 None:intergenic 55.0%
GACCAACCATCCACATGCGA+GGG + chr1_4:40006538-40006557 Msa0162720:intron 55.0%
AACCCTCGCATGTGGATGGT+TGG - chr1_4:40006543-40006562 None:intergenic 55.0%
TGAAATGAACCCCCAGGGGT+TGG - chr1_4:40006699-40006718 None:intergenic 55.0%
GAGGTCCACTCCTTCATTGG+TGG - chr1_4:40007129-40007148 None:intergenic 55.0%
AGCGGTTGACCCTAACTCAC+TGG - chr1_4:40007455-40007474 None:intergenic 55.0%
CAACCGCTGTGTATTAGGGC+TGG + chr1_4:40007467-40007486 Msa0162720:intron 55.0%
TGGGCAGTGGTATCTCTTCC+TGG + chr1_4:40007889-40007908 Msa0162720:intron 55.0%
CCACACTCTTCCTCCACTTC+AGG - chr1_4:40008339-40008358 None:intergenic 55.0%
CCTGAAGTGGAGGAAGAGTG+TGG + chr1_4:40008336-40008355 Msa0162720:intron 55.0%
AGGCGAGGAGAGAGAAGAGA+AGG + chr1_4:40008422-40008441 Msa0162720:intron 55.0%
GTCCATCGCTCTGCTTCATC+AGG + chr1_4:40008616-40008635 Msa0162720:intron 55.0%
ACCCTGATGAAGCAGAGCGA+TGG - chr1_4:40008621-40008640 None:intergenic 55.0%
AGCGGTTGACCCTAACTCAC+TGG - chr1_4:40007455-40007474 None:intergenic 55.0%
CAACCGCTGTGTATTAGGGC+TGG + chr1_4:40007467-40007486 Msa0162720:intron 55.0%
GTCATCAGCAAGCCAAGACC+GGG - chr1_4:40009891-40009910 None:intergenic 55.0%
GGTCATCAGCAAGCCAAGAC+CGG - chr1_4:40009892-40009911 None:intergenic 55.0%
TCCCTTGCTCTCTAGGTCCA+AGG + chr1_4:40010409-40010428 Msa0162720:intron 55.0%
CTCCTTGGACCTAGAGAGCA+AGG - chr1_4:40010414-40010433 None:intergenic 55.0%
CTTGCTCTCTAGGTCCAAGG+AGG + chr1_4:40010412-40010431 Msa0162720:intron 55.0%
! CTAGGTCCAAGGAGGTGTGT+TGG + chr1_4:40010420-40010439 Msa0162720:intron 55.0%
TCACCCTTAGGTCAGCTTCC+TGG + chr1_4:40010486-40010505 Msa0162720:intron 55.0%
CATGGACATGATTGGGGACC+TGG + chr1_4:40011288-40011307 Msa0162720:CDS 55.0%
ACAGAGGGATGTGGGAAAGG+GGG - chr1_4:40012908-40012927 None:intergenic 55.0%
GGAGAAGGAACTCACATGCG+TGG - chr1_4:40013400-40013419 None:intergenic 55.0%
TCGAGCAGAAAACGCCAGCA+AGG - chr1_4:40014410-40014429 None:intergenic 55.0%
GTTGGAGACTGTCTGTAGGC+TGG - chr1_4:40014433-40014452 None:intergenic 55.0%
CGGCAATATGCAGATGCCAC+TGG - chr1_4:40014488-40014507 None:intergenic 55.0%
! CCTCTAGTGGTGGGAAAGCA+CGG + chr1_4:40015897-40015916 Msa0162720:intron 55.0%
GGATGCACCCGTGCATTACA+AGG + chr1_4:40018521-40018540 Msa0162720:intron 55.0%
GGTTGCATTCTTAGGGGGCT+TGG + chr1_4:40019121-40019140 Msa0162720:intron 55.0%
TTGTAGCCGACCCCACTTAG+TGG + chr1_4:40019628-40019647 Msa0162720:intron 55.0%
TGTAGCCGACCCCACTTAGT+GGG + chr1_4:40019629-40019648 Msa0162720:intron 55.0%
CGACCCCACTTAGTGGGAAA+AGG + chr1_4:40019635-40019654 Msa0162720:intron 55.0%
! AGGCATTGCATCCACCTAGG+TGG + chr1_4:40019930-40019949 Msa0162720:intron 55.0%
CATTGCATCCACCTAGGTGG+AGG + chr1_4:40019933-40019952 Msa0162720:intron 55.0%
!!! CTTTTCGGGTTCCTCCACCT+AGG - chr1_4:40019947-40019966 None:intergenic 55.0%
GCACAATCTGTTCCCGACGA+AGG + chr1_4:40020087-40020106 Msa0162720:intron 55.0%
GAGTGTGGTCAAAGGGCTGT+GGG - chr1_4:40020122-40020141 None:intergenic 55.0%
AGAGTGTGGTCAAAGGGCTG+TGG - chr1_4:40020123-40020142 None:intergenic 55.0%
TAGGGCTACAAGGGAGAGTG+TGG - chr1_4:40020137-40020156 None:intergenic 55.0%
TCCATGCTGCTGTGGGTTCT+TGG + chr1_4:40020285-40020304 Msa0162720:intron 55.0%
ACCAAGAACCCACAGCAGCA+TGG - chr1_4:40020289-40020308 None:intergenic 55.0%
CTGCTGTGGGTTCTTGGTTC+AGG + chr1_4:40020291-40020310 Msa0162720:intron 55.0%
! GTGGGGCTAGGCAGGAATTT+TGG - chr1_4:40020939-40020958 None:intergenic 55.0%
AGAGGTCTTGGAGGAAGGTG+GGG - chr1_4:40020956-40020975 None:intergenic 55.0%
CAGAGGTCTTGGAGGAAGGT+GGG - chr1_4:40020957-40020976 None:intergenic 55.0%
TCAGAGGTCTTGGAGGAAGG+TGG - chr1_4:40020958-40020977 None:intergenic 55.0%
GAAGGCTGCTCGAGGAAGTA+TGG + chr1_4:40022823-40022842 Msa0162720:intron 55.0%
GGAGTGAAGGTGGAGGAGAG+AGG - chr1_4:40006107-40006126 None:intergenic 60.0%
TGTGGGAGGAGTGAAGGTGG+AGG - chr1_4:40006114-40006133 None:intergenic 60.0%
TCCACCTTCACTCCTCCCAC+AGG + chr1_4:40006113-40006132 Msa0162720:CDS 60.0%
ACCTGTGGGAGGAGTGAAGG+TGG - chr1_4:40006117-40006136 None:intergenic 60.0%
GGACCAACCATCCACATGCG+AGG + chr1_4:40006537-40006556 Msa0162720:intron 60.0%
TGTAGGCTGCGGACAAAGGC+TGG - chr1_4:40006668-40006687 None:intergenic 60.0%
GTGGTGTAGGCTGCGGACAA+AGG - chr1_4:40006672-40006691 None:intergenic 60.0%
TGTCCGCAGCCTACACCACT+CGG + chr1_4:40006673-40006692 Msa0162720:intron 60.0%
CCGTGCTTTCCCACCACTAG+AGG - chr1_4:40015900-40015919 None:intergenic 60.0%
! TGGTGGGAAAGCACGGTGTC+AGG + chr1_4:40015904-40015923 Msa0162720:intron 60.0%
! GGTGGGAAAGCACGGTGTCA+GGG + chr1_4:40015905-40015924 Msa0162720:intron 60.0%
! GTGGGAAAGCACGGTGTCAG+GGG + chr1_4:40015906-40015925 Msa0162720:intron 60.0%
TCAGAGCGTGCTTCGAACGG+AGG + chr1_4:40017589-40017608 Msa0162720:CDS 60.0%
! TTCGGGTTCCTCCACCTAGG+TGG - chr1_4:40019944-40019963 None:intergenic 60.0%
GGGAAAGCTGCTGAGTTCGC+TGG - chr1_4:40020059-40020078 None:intergenic 60.0%
! TGGGCGATCTTGGCCTTCGT+CGG - chr1_4:40020103-40020122 None:intergenic 60.0%
CAAAGGGCTGTGGGCGATCT+TGG - chr1_4:40020113-40020132 None:intergenic 60.0%
! GGCGATCCCGAGTATCGCAA+AGG - chr1_4:40020505-40020524 None:intergenic 60.0%
TCGGGATCGCCTCCTTTGAG+TGG + chr1_4:40020514-40020533 Msa0162720:intron 60.0%
TCTTGGAGGAAGGTGGGGCT+AGG - chr1_4:40020951-40020970 None:intergenic 60.0%
!! TGAGCATCGGCGCGTAGACG+AGG - chr1_4:40006081-40006100 None:intergenic 65.0%
GCTGCGGACAAAGGCTGGAG+AGG - chr1_4:40006663-40006682 None:intergenic 65.0%
TGGCCGAGTGGTGTAGGCTG+CGG - chr1_4:40006679-40006698 None:intergenic 65.0%
!! AGGGGTTGGCCGAGTGGTGT+AGG - chr1_4:40006685-40006704 None:intergenic 65.0%
TACACCACTCGGCCAACCCC+TGG + chr1_4:40006684-40006703 Msa0162720:intron 65.0%
ACACCACTCGGCCAACCCCT+GGG + chr1_4:40006685-40006704 Msa0162720:intron 65.0%
TGTTTGGGGGGTGGGGGTTG+AGG - chr1_4:40009260-40009279 None:intergenic 65.0%
! GGGCGATCTTGGCCTTCGTC+GGG - chr1_4:40020102-40020121 None:intergenic 65.0%
CACCACTCGGCCAACCCCTG+GGG + chr1_4:40006686-40006705 Msa0162720:intron 70.0%
ACCACTCGGCCAACCCCTGG+GGG + chr1_4:40006687-40006706 Msa0162720:intron 70.0%
GGAGGAAGGTGGGGCTAGGC+AGG - chr1_4:40020947-40020966 None:intergenic 70.0%
!! ACCCCCAGGGGTTGGCCGAG+TGG - chr1_4:40006691-40006710 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 40005956 40023834 40005956 ID=Msa0162720;Name=Msa0162720
chr1_4 mRNA 40005956 40023834 40005956 ID=Msa0162720-mRNA-1;Parent=Msa0162720;Name=Msa0162720-mRNA-1;_AED=0.09;_eAED=0.09;_QI=71|1|1|1|1|1|23|285|905
chr1_4 exon 40005956 40006134 40005956 ID=Msa0162720-mRNA-1:exon:11592;Parent=Msa0162720-mRNA-1
chr1_4 exon 40007006 40007206 40007006 ID=Msa0162720-mRNA-1:exon:11593;Parent=Msa0162720-mRNA-1
chr1_4 exon 40009631 40009661 40009631 ID=Msa0162720-mRNA-1:exon:11594;Parent=Msa0162720-mRNA-1
chr1_4 exon 40009756 40009940 40009756 ID=Msa0162720-mRNA-1:exon:11595;Parent=Msa0162720-mRNA-1
chr1_4 exon 40011217 40011376 40011217 ID=Msa0162720-mRNA-1:exon:11596;Parent=Msa0162720-mRNA-1
chr1_4 exon 40013308 40013404 40013308 ID=Msa0162720-mRNA-1:exon:11597;Parent=Msa0162720-mRNA-1
chr1_4 exon 40014385 40014554 40014385 ID=Msa0162720-mRNA-1:exon:11598;Parent=Msa0162720-mRNA-1
chr1_4 exon 40014737 40014903 40014737 ID=Msa0162720-mRNA-1:exon:11599;Parent=Msa0162720-mRNA-1
chr1_4 exon 40015347 40015532 40015347 ID=Msa0162720-mRNA-1:exon:11600;Parent=Msa0162720-mRNA-1
chr1_4 exon 40015639 40015728 40015639 ID=Msa0162720-mRNA-1:exon:11601;Parent=Msa0162720-mRNA-1
chr1_4 exon 40017010 40017090 40017010 ID=Msa0162720-mRNA-1:exon:11602;Parent=Msa0162720-mRNA-1
chr1_4 exon 40017556 40017699 40017556 ID=Msa0162720-mRNA-1:exon:11603;Parent=Msa0162720-mRNA-1
chr1_4 exon 40017820 40017902 40017820 ID=Msa0162720-mRNA-1:exon:11604;Parent=Msa0162720-mRNA-1
chr1_4 exon 40018113 40018248 40018113 ID=Msa0162720-mRNA-1:exon:11605;Parent=Msa0162720-mRNA-1
chr1_4 exon 40018337 40018420 40018337 ID=Msa0162720-mRNA-1:exon:11606;Parent=Msa0162720-mRNA-1
chr1_4 exon 40018881 40019039 40018881 ID=Msa0162720-mRNA-1:exon:11607;Parent=Msa0162720-mRNA-1
chr1_4 exon 40019122 40019191 40019122 ID=Msa0162720-mRNA-1:exon:11608;Parent=Msa0162720-mRNA-1
chr1_4 exon 40021449 40021526 40021449 ID=Msa0162720-mRNA-1:exon:11609;Parent=Msa0162720-mRNA-1
chr1_4 exon 40021710 40021776 40021710 ID=Msa0162720-mRNA-1:exon:11610;Parent=Msa0162720-mRNA-1
chr1_4 exon 40021872 40021968 40021872 ID=Msa0162720-mRNA-1:exon:11611;Parent=Msa0162720-mRNA-1
chr1_4 exon 40022627 40022743 40022627 ID=Msa0162720-mRNA-1:exon:11612;Parent=Msa0162720-mRNA-1
chr1_4 exon 40022827 40022883 40022827 ID=Msa0162720-mRNA-1:exon:11613;Parent=Msa0162720-mRNA-1
chr1_4 exon 40023400 40023834 40023400 ID=Msa0162720-mRNA-1:exon:11614;Parent=Msa0162720-mRNA-1
chr1_4 five_prime_UTR 40005956 40006026 40005956 ID=Msa0162720-mRNA-1:five_prime_utr;Parent=Msa0162720-mRNA-1
chr1_4 CDS 40006027 40006134 40006027 ID=Msa0162720-mRNA-1:cds;Parent=Msa0162720-mRNA-1
chr1_4 CDS 40007006 40007206 40007006 ID=Msa0162720-mRNA-1:cds;Parent=Msa0162720-mRNA-1
chr1_4 CDS 40009631 40009661 40009631 ID=Msa0162720-mRNA-1:cds;Parent=Msa0162720-mRNA-1
chr1_4 CDS 40009756 40009940 40009756 ID=Msa0162720-mRNA-1:cds;Parent=Msa0162720-mRNA-1
chr1_4 CDS 40011217 40011376 40011217 ID=Msa0162720-mRNA-1:cds;Parent=Msa0162720-mRNA-1
chr1_4 CDS 40013308 40013404 40013308 ID=Msa0162720-mRNA-1:cds;Parent=Msa0162720-mRNA-1
chr1_4 CDS 40014385 40014554 40014385 ID=Msa0162720-mRNA-1:cds;Parent=Msa0162720-mRNA-1
chr1_4 CDS 40014737 40014903 40014737 ID=Msa0162720-mRNA-1:cds;Parent=Msa0162720-mRNA-1
chr1_4 CDS 40015347 40015532 40015347 ID=Msa0162720-mRNA-1:cds;Parent=Msa0162720-mRNA-1
chr1_4 CDS 40015639 40015728 40015639 ID=Msa0162720-mRNA-1:cds;Parent=Msa0162720-mRNA-1
chr1_4 CDS 40017010 40017090 40017010 ID=Msa0162720-mRNA-1:cds;Parent=Msa0162720-mRNA-1
chr1_4 CDS 40017556 40017699 40017556 ID=Msa0162720-mRNA-1:cds;Parent=Msa0162720-mRNA-1
chr1_4 CDS 40017820 40017902 40017820 ID=Msa0162720-mRNA-1:cds;Parent=Msa0162720-mRNA-1
chr1_4 CDS 40018113 40018248 40018113 ID=Msa0162720-mRNA-1:cds;Parent=Msa0162720-mRNA-1
chr1_4 CDS 40018337 40018420 40018337 ID=Msa0162720-mRNA-1:cds;Parent=Msa0162720-mRNA-1
chr1_4 CDS 40018881 40019039 40018881 ID=Msa0162720-mRNA-1:cds;Parent=Msa0162720-mRNA-1
chr1_4 CDS 40019122 40019191 40019122 ID=Msa0162720-mRNA-1:cds;Parent=Msa0162720-mRNA-1
chr1_4 CDS 40021449 40021526 40021449 ID=Msa0162720-mRNA-1:cds;Parent=Msa0162720-mRNA-1
chr1_4 CDS 40021710 40021776 40021710 ID=Msa0162720-mRNA-1:cds;Parent=Msa0162720-mRNA-1
chr1_4 CDS 40021872 40021968 40021872 ID=Msa0162720-mRNA-1:cds;Parent=Msa0162720-mRNA-1
chr1_4 CDS 40022627 40022743 40022627 ID=Msa0162720-mRNA-1:cds;Parent=Msa0162720-mRNA-1
chr1_4 CDS 40022827 40022883 40022827 ID=Msa0162720-mRNA-1:cds;Parent=Msa0162720-mRNA-1
chr1_4 CDS 40023400 40023549 40023400 ID=Msa0162720-mRNA-1:cds;Parent=Msa0162720-mRNA-1
chr1_4 three_prime_UTR 40023550 40023834 40023550 ID=Msa0162720-mRNA-1:three_prime_utr;Parent=Msa0162720-mRNA-1
Gene Sequence

>Msa0162720

ATGGAGTTCAGAACTCGTGATTACCAAACTGAGAAGGAATCTCACGCGCTTCCTCGTCTACGCGCCGATGCTCATCCCCTCTCTCCTCCACCTTCACTCCTCCCACAGGTTAACGTTGTTGTCGATGATGGGAATGCCGACTTCTTTGATCCACTAAGAGGAGGAATTAATAATGATGCAAAGGCTAGCCCTCCAGAACCTGTCAACTTGAATGAAGTTGCTGGTGATCCACCAATGAAGGAGTGGACCTCTTTCAGGAGACTACTAATGCAGAGGTTTCCTGTCTCGAAGATGGTTTCACTTTCTTCAATGCCCGATGTTTTAATGAGAAGTGGAAAATCACATGACAAGTCTTCAACAAGTATGCACCTGGAGGAACTAGATGATCCACAAAAATTTGCAGATGAGGGTGTCAAGGTGATTACTTGGCAGGATTATGTTTCTCGACTACACGAGCTCAAAGATGAAATTACCCGGTCTTGGCTTGCTGATGACCGTGTAACATCCTTAAAGTTATCTATAAAGGTTGCTAAGCTTTTGGTGGATACTTCAGTATCTGAGTTTTATCCCACTCTATTTGTCCTTGTCACAGATATCATGGACATGATTGGGGACCTGGTTTGGAAACGCATAAAGCAGAAAGCAGAATTTACTGAAGATGGAACTTTACTCTGCAACTTGGCAGAAAACTTTGAAGCAAGCAATATTTGTGCCGATGCCAAAGAAACTTGCTATAACTGGTTCAGCAAAATTGGCGCTGTGCAAGATCTTCTTCCACGCATTTACTTGGAGATGGCATTATTGCCTTGCTGGCGTTTTCTGCTCGACCAGCCTACAGACAGTCTCCAACGCTTGGTGATGATGACAAGAGGATTAGGAGATCCAGTGGCATCTGCATATTGCCGTCTATATATGGCTCATTGTGCTCAGAAGCTTCCATCACATGACATAGGTTATCTTGTTACATGTGTTAATGATCTAAGAGTTATTTTGACGCAAACCTTAGCTGCCAATGAAAGTACTCTTGGAAATTTCAAAAATAATAAAAAATTGCAAATCAGCCTGATGGAACCAACCATTGAGTATATTATGAAGTGTATATTTAGCGGGTTATCTCAGAGACGAGTCAATGAAGTTCTATCAGAGCTTGGATTGTTGAAGAATCAACAGAATTTTGAGACTGTTTCATGTGTTTCGGTCGTTCTTCATCATTTACTGAAAGAACTCTCTATTGAAGTAGTCAGTTCAAATGTTGTGAATATCCTTCATCTCATTGAATTTAACAAGGATACTTCCTTTCATCAGCACCTGAATTACAGATTGCTTGGGTTCAGGCTGTATGAAGGGAAATGCCCGGTTAACATTGTCAATGCTGTGTTAGATAAAGTTATGCAGATTATTGTCCCGTACGAGAGTCTTGATGAGTACCTGAGTGTCGTAGATGCTTATGTTGATCTTATACTTCAGAATCAAATGAATAATCATTTGGACATCATTTTGAGAGGCATTTCAGAGCGTGCTTCGAACGGAGGAGTTACAGTAGATGAAATGTCAAGCTTGCAATCTCTCTTGGTGAAGCTTCTGTCTCATTTTGAGTGTCTGGAAGATGTGTTTTATCTGAATCATTTTCCTGAAATCTTAGATGTAATGCATGGGAAATCACAAGATGTTGTCTTTTTGTACATCCTTAATATGGCGACGAGGAGTGGTCATATTAGGGATCCGACAAGCATACACTTGCTTTCTGAAATTTCTCAGGCTCTACATGATAATATGGAATTTACGAATAAGGATGATGATGGGCAAGTGGCACGTTCAGTATCTCGCTTTGTGCACATGGTAGATTATGGAACGGAGATGGAATCCCATTTAGCATTTCTGGTTGATTGCCGAGCAAATTTTGGTAGATTCAACGAGCTTAAGGAAACTCTCGTTCACTCCAGCAATTCTTTAGCAATTCAATCTTTGAAATGTACTAAGAAAGATCTGAGTTTTTTCAAGTCCTGTGTCACATTTAGCGAAGTCACAATACCTTCTATCTCTGGTCAGAGACAATTTGATCTTTTTCTAGAGACTGCAGAGGTTGCATTCTTAGGGGGCTTGGTTTCTCATGTAGATGGATTGATTGATTCAGGAATTGGCTGTTTGCATGGCTTTCGAACTCCAACTGATGTTGAAGGGCTAGTTTCATCTATTAGAAAGCTGTGTAGCTTCTTAATTATGGTCCCAGGTAATACCAGTGTACCAGTTACCTACTTCCCTAATAACTTATATACATTGATCAGCTCCCAATCATGGTTTGACCCAAAAATGAGGACACGGATTTTTTCTGCTATCTTATTATTATTAACAACTTTATCACAAAAGACTATGCCATATCATGCAAATACACAGATACCAGGCAATGACATGTTATACTATGGGGATTTATCTTACAAGCAAGAACTTGTTTCTTTGTCTAAGGTTGTTCTTGAGAACTTACTTTGTGCCGTTCAGGAAGAACCTTCTCAGGCTGCTCGAGGAAGTATGGCACTTGAAGCTTGCAATTGCATTTTATCATCTTTTCTGCTAAGCAATGAATTATCCTCTACTTGCCTTACACTGATTGGAACAGCCAAGTCATGTTTGAGTGCCCAAGACAGATGCCTCCAGTCAACCATTCAACTTGTAAACAAGCAATTGCCAGATTTTGCAGGGGCCATTTCAACTTCTGTATGA
Protein sequence

>Msa0162720

MEFRTRDYQTEKESHALPRLRADAHPLSPPPSLLPQVNVVVDDGNADFFDPLRGGINNDAKASPPEPVNLNEVAGDPPMKEWTSFRRLLMQRFPVSKMVSLSSMPDVLMRSGKSHDKSSTSMHLEELDDPQKFADEGVKVITWQDYVSRLHELKDEITRSWLADDRVTSLKLSIKVAKLLVDTSVSEFYPTLFVLVTDIMDMIGDLVWKRIKQKAEFTEDGTLLCNLAENFEASNICADAKETCYNWFSKIGAVQDLLPRIYLEMALLPCWRFLLDQPTDSLQRLVMMTRGLGDPVASAYCRLYMAHCAQKLPSHDIGYLVTCVNDLRVILTQTLAANESTLGNFKNNKKLQISLMEPTIEYIMKCIFSGLSQRRVNEVLSELGLLKNQQNFETVSCVSVVLHHLLKELSIEVVSSNVVNILHLIEFNKDTSFHQHLNYRLLGFRLYEGKCPVNIVNAVLDKVMQIIVPYESLDEYLSVVDAYVDLILQNQMNNHLDIILRGISERASNGGVTVDEMSSLQSLLVKLLSHFECLEDVFYLNHFPEILDVMHGKSQDVVFLYILNMATRSGHIRDPTSIHLLSEISQALHDNMEFTNKDDDGQVARSVSRFVHMVDYGTEMESHLAFLVDCRANFGRFNELKETLVHSSNSLAIQSLKCTKKDLSFFKSCVTFSEVTIPSISGQRQFDLFLETAEVAFLGGLVSHVDGLIDSGIGCLHGFRTPTDVEGLVSSIRKLCSFLIMVPGNTSVPVTYFPNNLYTLISSQSWFDPKMRTRIFSAILLLLTTLSQKTMPYHANTQIPGNDMLYYGDLSYKQELVSLSKVVLENLLCAVQEEPSQAARGSMALEACNCILSSFLLSNELSSTCLTLIGTAKSCLSAQDRCLQSTIQLVNKQLPDFAGAISTSV*