Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1444150 | sp|Q9SZL8|FRS5_ARATH | 41.121 | 107 | 58 | 1 | 174 | 275 | 429 | 535 | 3.03e-20 | 97.4 |
| Msa1444150 | sp|Q9SZL8|FRS5_ARATH | 36.486 | 148 | 72 | 5 | 36 | 166 | 59 | 201 | 1.93e-15 | 82.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1444150 | A0A6A5MW98 | 54.206 | 321 | 101 | 6 | 172 | 453 | 101 | 414 | 6.45e-105 | 328 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1444150 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1444150 | Msa1444710 | 0.993158 | 7.723570e-198 | -8.615850e-47 |
| Msa1208310 | Msa1444150 | 0.920286 | 1.551566e-87 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1444150 | MtrunA17_Chr5g0448761 | 42.991 | 107 | 56 | 1 | 174 | 275 | 420 | 526 | 1.82e-21 | 97.8 |
| Msa1444150 | MtrunA17_Chr5g0448761 | 36.765 | 136 | 67 | 5 | 45 | 166 | 59 | 189 | 3.28e-15 | 78.2 |
| Msa1444150 | MtrunA17_Chr1g0202341 | 38.095 | 126 | 66 | 3 | 165 | 280 | 397 | 520 | 4.33e-19 | 90.1 |
| Msa1444150 | MtrunA17_Chr1g0202341 | 30.058 | 173 | 101 | 6 | 10 | 170 | 17 | 181 | 2.17e-12 | 69.3 |
| Msa1444150 | MtrunA17_Chr1g0196541 | 37.398 | 123 | 64 | 2 | 146 | 255 | 309 | 431 | 1.92e-18 | 88.2 |
| Msa1444150 | MtrunA17_Chr5g0441581 | 37.838 | 111 | 64 | 1 | 150 | 255 | 349 | 459 | 2.70e-17 | 84.7 |
| Msa1444150 | MtrunA17_Chr2g0296781 | 42.529 | 87 | 45 | 1 | 174 | 255 | 345 | 431 | 1.04e-16 | 82.8 |
| Msa1444150 | MtrunA17_Chr5g0448511 | 39.252 | 107 | 60 | 1 | 174 | 275 | 192 | 298 | 1.21e-16 | 82.4 |
| Msa1444150 | MtrunA17_Chr6g0477261 | 42.529 | 87 | 45 | 1 | 174 | 255 | 234 | 320 | 1.22e-16 | 82.8 |
| Msa1444150 | MtrunA17_Chr3g0080351 | 34.545 | 110 | 67 | 1 | 171 | 275 | 416 | 525 | 2.41e-14 | 75.5 |
| Msa1444150 | MtrunA17_Chr1g0207551 | 30.909 | 110 | 71 | 1 | 171 | 275 | 382 | 491 | 4.81e-13 | 71.6 |
| Msa1444150 | MtrunA17_Chr2g0291581 | 32.500 | 120 | 76 | 1 | 155 | 269 | 390 | 509 | 9.20e-13 | 70.5 |
| Msa1444150 | MtrunA17_Chr3g0118611 | 33.051 | 118 | 71 | 3 | 164 | 275 | 287 | 402 | 3.15e-12 | 68.9 |
| Msa1444150 | MtrunA17_Chr3g0078041 | 36.207 | 116 | 53 | 6 | 45 | 146 | 49 | 157 | 1.09e-11 | 64.7 |
| Msa1444150 | MtrunA17_Chr2g0291591 | 32.353 | 136 | 66 | 7 | 44 | 166 | 62 | 184 | 3.70e-11 | 65.5 |
| Msa1444150 | MtrunA17_Chr5g0440451 | 31.897 | 116 | 70 | 3 | 165 | 275 | 394 | 505 | 7.00e-11 | 64.7 |
| Msa1444150 | MtrunA17_Chr7g0258861 | 31.250 | 128 | 69 | 5 | 42 | 157 | 6 | 126 | 8.02e-11 | 63.2 |
| Msa1444150 | MtrunA17_Chr1g0198761 | 26.012 | 173 | 120 | 2 | 112 | 284 | 362 | 526 | 8.51e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1444150 | AT4G38180.1 | 41.121 | 107 | 58 | 1 | 174 | 275 | 429 | 535 | 3.08e-21 | 97.4 |
| Msa1444150 | AT4G38180.1 | 36.486 | 148 | 72 | 5 | 36 | 166 | 59 | 201 | 1.96e-16 | 82.4 |
| Msa1444150 | AT4G15090.1 | 36.111 | 108 | 64 | 1 | 171 | 273 | 402 | 509 | 1.43e-17 | 86.3 |
| Msa1444150 | AT4G15090.5 | 36.111 | 108 | 64 | 1 | 171 | 273 | 402 | 509 | 1.43e-17 | 86.3 |
| Msa1444150 | AT4G15090.3 | 36.111 | 108 | 64 | 1 | 171 | 273 | 402 | 509 | 1.43e-17 | 86.3 |
| Msa1444150 | AT4G15090.2 | 36.111 | 108 | 64 | 1 | 171 | 273 | 402 | 509 | 1.43e-17 | 86.3 |
| Msa1444150 | AT4G15090.4 | 36.111 | 108 | 64 | 1 | 171 | 273 | 402 | 509 | 1.43e-17 | 86.3 |
| Msa1444150 | AT4G38170.1 | 33.645 | 107 | 66 | 1 | 174 | 275 | 194 | 300 | 6.09e-16 | 80.5 |
| Msa1444150 | AT3G22170.2 | 32.174 | 115 | 69 | 2 | 170 | 275 | 406 | 520 | 5.24e-14 | 75.1 |
| Msa1444150 | AT3G22170.1 | 32.174 | 115 | 69 | 2 | 170 | 275 | 406 | 520 | 5.24e-14 | 75.1 |
| Msa1444150 | AT2G27110.3 | 32.278 | 158 | 93 | 6 | 165 | 317 | 224 | 372 | 3.28e-13 | 72.4 |
| Msa1444150 | AT2G27110.2 | 32.278 | 158 | 93 | 6 | 165 | 317 | 369 | 517 | 3.81e-13 | 72.4 |
| Msa1444150 | AT2G27110.1 | 32.278 | 158 | 93 | 6 | 165 | 317 | 369 | 517 | 3.81e-13 | 72.4 |
| Msa1444150 | AT5G18960.2 | 35.043 | 117 | 66 | 3 | 171 | 280 | 523 | 636 | 2.40e-11 | 66.6 |
| Msa1444150 | AT5G18960.1 | 35.043 | 117 | 66 | 3 | 171 | 280 | 523 | 636 | 2.40e-11 | 66.6 |
| Msa1444150 | AT1G76320.1 | 25.967 | 181 | 112 | 4 | 171 | 346 | 339 | 502 | 7.80e-11 | 65.1 |
| Msa1444150 | AT1G76320.4 | 25.967 | 181 | 112 | 4 | 171 | 346 | 339 | 502 | 7.80e-11 | 65.1 |
| Msa1444150 | AT1G76320.2 | 25.967 | 181 | 112 | 4 | 171 | 346 | 339 | 502 | 7.99e-11 | 64.7 |
Find 56 sgRNAs with CRISPR-Local
Find 276 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCCTCCGACAAGCAATTT+TGG | 0.188112 | tig0030662:-21716 | None:intergenic |
| TTTACAATTCATTTGCAAAA+AGG | 0.228560 | tig0030662:+19844 | Msa1444150:CDS |
| TGCATCCTTCTTAATATCTT+TGG | 0.239826 | tig0030662:-21522 | None:intergenic |
| AGCAAAGGTATTAGTTGATT+TGG | 0.254141 | tig0030662:+21557 | Msa1444150:CDS |
| ACAGGTGCATTGGTCAATTA+TGG | 0.275145 | tig0030662:+19671 | Msa1444150:intron |
| GAGGTACATTAGAAGGAAAT+TGG | 0.278387 | tig0030662:+20048 | Msa1444150:intron |
| GGAGTTTCTCCTTTGGAATC+TGG | 0.287253 | tig0030662:+21681 | Msa1444150:CDS |
| GGATTTCTAATAGTCAATTC+TGG | 0.312090 | tig0030662:-21747 | None:intergenic |
| CATACAAAGACAGCTCTCTT+TGG | 0.340587 | tig0030662:-19900 | None:intergenic |
| TATATAAAATTAGAGAATCT+TGG | 0.344745 | tig0030662:+20905 | Msa1444150:intron |
| TTTAATTCCTCACCAACATT+AGG | 0.347135 | tig0030662:-19768 | None:intergenic |
| ATTAAATAGTGAACCTTGTA+AGG | 0.348615 | tig0030662:+19785 | Msa1444150:CDS |
| CAGTGATGGAGTTTCTCCTT+TGG | 0.356600 | tig0030662:+21674 | Msa1444150:CDS |
| TAGTTTGATTTGTGTCATCT+TGG | 0.378031 | tig0030662:-19971 | None:intergenic |
| TGCAACGCTGCAAAATAAAA+TGG | 0.387426 | tig0030662:-21431 | None:intergenic |
| AAACAGCTTCTATTATAAAC+TGG | 0.392497 | tig0030662:-20931 | None:intergenic |
| GTCCGTACTCAATCATTAAT+CGG | 0.426232 | tig0030662:-20855 | None:intergenic |
| AAGTGTTCTACTTCTCGAAC+TGG | 0.426697 | tig0030662:+19999 | Msa1444150:CDS |
| CCACGCAATGCACAAACAAA+AGG | 0.435072 | tig0030662:+21768 | Msa1444150:CDS |
| GCCACACTTGTTGTTAAAAG+AGG | 0.437725 | tig0030662:+20029 | Msa1444150:CDS |
| GACAACAATGAATGGCTTCA+AGG | 0.439948 | tig0030662:+20880 | Msa1444150:CDS |
| AATTCATTATATCTGATTTG+AGG | 0.445916 | tig0030662:+21604 | Msa1444150:CDS |
| CGCTGCAAAATAAAATGGTC+AGG | 0.446582 | tig0030662:-21426 | None:intergenic |
| TGTCATGAGTGTGGTGAATC+TGG | 0.451337 | tig0030662:+21888 | Msa1444150:CDS |
| ATTTGTGTTGAAATTTGAAA+AGG | 0.454017 | tig0030662:+21041 | Msa1444150:CDS |
| TTGAATTCCATCCCCTTACA+AGG | 0.484462 | tig0030662:-19798 | None:intergenic |
| TTAGCTGCTGCTCCTAATGT+TGG | 0.490364 | tig0030662:+19756 | Msa1444150:CDS |
| AAAGAGAGGATTATGAAAGT+AGG | 0.500092 | tig0030662:+21091 | Msa1444150:CDS |
| ATTTGATTTCTTCATTGCAA+TGG | 0.501662 | tig0030662:-21643 | None:intergenic |
| CAAAATTGTAGATTCAAAAG+TGG | 0.511466 | tig0030662:+21819 | Msa1444150:CDS |
| GTCTTTGTATGTTGTAATGA+AGG | 0.517879 | tig0030662:+19912 | Msa1444150:CDS |
| TGATTTGAGGCGCACTCGTA+TGG | 0.520232 | tig0030662:+21617 | Msa1444150:CDS |
| TAGTGAACCTTGTAAGGGGA+TGG | 0.531310 | tig0030662:+19791 | Msa1444150:CDS |
| CACGCAATGCACAAACAAAA+GGG | 0.538817 | tig0030662:+21769 | Msa1444150:CDS |
| TGTCAACCAAAATTGCTTGT+CGG | 0.544243 | tig0030662:+21710 | Msa1444150:CDS |
| CGGTGTCATAAAAGCATGAA+TGG | 0.550442 | tig0030662:+20137 | Msa1444150:CDS |
| ACAAAAGGGAGAAAGAAGAA+TGG | 0.552574 | tig0030662:+21783 | Msa1444150:CDS |
| TCAAATTTAGCTATCAGTGA+TGG | 0.553213 | tig0030662:+21660 | Msa1444150:CDS |
| TTAAATAGTGAACCTTGTAA+GGG | 0.571595 | tig0030662:+19786 | Msa1444150:CDS |
| GCACGCCAAAGATATTAAGA+AGG | 0.572798 | tig0030662:+21517 | Msa1444150:CDS |
| ACAACAATGAATGGCTTCAA+GGG | 0.573168 | tig0030662:+20881 | Msa1444150:CDS |
| ACGGACTGGACAACAATGAA+TGG | 0.575271 | tig0030662:+20872 | Msa1444150:CDS |
| GTCTACAGGGTCAAAACTTG+AGG | 0.581238 | tig0030662:+21131 | Msa1444150:CDS |
| TGTGTTGAAATTTGAAAAGG+CGG | 0.586171 | tig0030662:+21044 | Msa1444150:CDS |
| AGCCGATTAATGATTGAGTA+CGG | 0.595364 | tig0030662:+20853 | Msa1444150:CDS |
| TGCTGCTCCTAATGTTGGTG+AGG | 0.601546 | tig0030662:+19761 | Msa1444150:CDS |
| GCATGCTCAACAAGAAGCAA+AGG | 0.605686 | tig0030662:+21542 | Msa1444150:CDS |
| TTCCACATTTGTTGACTGTG+TGG | 0.606600 | tig0030662:-19715 | None:intergenic |
| ATTAATGATTGAGTACGGAC+TGG | 0.607432 | tig0030662:+20858 | Msa1444150:CDS |
| GTGCATTGGTCAATTATGGA+TGG | 0.620199 | tig0030662:+19675 | Msa1444150:CDS |
| AGCCACACAGTCAACAAATG+TGG | 0.622019 | tig0030662:+19713 | Msa1444150:CDS |
| TAAATAGTGAACCTTGTAAG+GGG | 0.625905 | tig0030662:+19787 | Msa1444150:CDS |
| CAACCAAAATTGCTTGTCGG+AGG | 0.633822 | tig0030662:+21713 | Msa1444150:CDS |
| GAATGATCATAACCATCCCA+TGG | 0.640152 | tig0030662:+20088 | Msa1444150:CDS |
| CTAAAAGTGTGTCTTATATG+CGG | 0.670716 | tig0030662:+20117 | Msa1444150:CDS |
| AGAAAAGCATGTCATGAGTG+TGG | 0.709074 | tig0030662:+21879 | Msa1444150:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTAAAACTTTCTTTTTT+TGG | + | tig0030662:17413-17432 | Msa1444150:intron | 10.0% |
| !!! | TTTAATTTTAATTTTACGTA+CGG | + | tig0030662:18025-18044 | Msa1444150:intron | 10.0% |
| !!! | ATGAAATATGTTTTATTTTT+TGG | + | tig0030662:18452-18471 | Msa1444150:intron | 10.0% |
| !!! | TGAAATATGTTTTATTTTTT+GGG | + | tig0030662:18453-18472 | Msa1444150:intron | 10.0% |
| !! | TATGATCTATATTATTATTA+TGG | + | tig0030662:18645-18664 | Msa1444150:intron | 10.0% |
| !!! | TATGTCATAATTATAATTTT+TGG | - | tig0030662:18835-18854 | None:intergenic | 10.0% |
| !! | TTAATTCAATTTAATTGTTA+AGG | + | tig0030662:19045-19064 | Msa1444150:intron | 10.0% |
| !!! | CAATTATTTTTATAAAAAAC+AGG | + | tig0030662:19653-19672 | Msa1444150:intron | 10.0% |
| !! | CATTTAATAAATGATGTATT+TGG | - | tig0030662:17661-17680 | None:intergenic | 15.0% |
| !! | ATGATATTTGTACAATTTAT+TGG | - | tig0030662:17782-17801 | None:intergenic | 15.0% |
| !!! | TTAATTTTAATTTTACGTAC+GGG | + | tig0030662:18026-18045 | Msa1444150:intron | 15.0% |
| !! | AAATATGTCTTTAATTAAGT+AGG | + | tig0030662:18479-18498 | Msa1444150:intron | 15.0% |
| !! | CATTCAATTAATAATATATG+TGG | - | tig0030662:18672-18691 | None:intergenic | 15.0% |
| !!! | TAAGCAAATTTTGAATTTTT+AGG | - | tig0030662:18697-18716 | None:intergenic | 15.0% |
| !! | AAAATCAAAATAAGTAGTTA+TGG | - | tig0030662:18805-18824 | None:intergenic | 15.0% |
| !! | GTAAATTAGAAAGAAAAAAA+TGG | - | tig0030662:19412-19431 | None:intergenic | 15.0% |
| !!! | CATTATCAATCAATTTTATT+TGG | + | tig0030662:20535-20554 | Msa1444150:intron | 15.0% |
| !! | TATATAAAATTAGAGAATCT+TGG | + | tig0030662:20905-20924 | Msa1444150:intron | 15.0% |
| !! | TACTAATTAGAGAAATGATA+TGG | + | tig0030662:17282-17301 | Msa1444150:intron | 20.0% |
| !! | ACTAATTAGAGAAATGATAT+GGG | + | tig0030662:17283-17302 | Msa1444150:intron | 20.0% |
| !!! | TAAGCAAATTTTGACTTTTA+AGG | + | tig0030662:17597-17616 | Msa1444150:intron | 20.0% |
| !!! | CATTTACTTCATTTACTTTT+GGG | - | tig0030662:17827-17846 | None:intergenic | 20.0% |
| !!! | TCATTTACTTCATTTACTTT+TGG | - | tig0030662:17828-17847 | None:intergenic | 20.0% |
| !! | AAATGAAGTAAATGAGTAAA+AGG | + | tig0030662:17833-17852 | Msa1444150:intron | 20.0% |
| !!! | TAAAAATTTAAGGTCCATTT+TGG | - | tig0030662:18513-18532 | None:intergenic | 20.0% |
| !!! | CCTTAAATTTTTAAACATGT+CGG | + | tig0030662:18520-18539 | Msa1444150:intron | 20.0% |
| !!! | AATTTGCTTATAATTGACAA+CGG | - | tig0030662:18707-18726 | None:intergenic | 20.0% |
| !! | ATTCAATTTAATTGTTAAGG+TGG | + | tig0030662:19048-19067 | Msa1444150:intron | 20.0% |
| !! | TTCAATTTAATTGTTAAGGT+GGG | + | tig0030662:19049-19068 | Msa1444150:intron | 20.0% |
| !! | TGCCAATTTCTTATATAATT+AGG | + | tig0030662:19282-19301 | Msa1444150:intron | 20.0% |
| !! | GCCAATTTCTTATATAATTA+GGG | + | tig0030662:19283-19302 | Msa1444150:intron | 20.0% |
| !! | ACCCTAATTATATAAGAAAT+TGG | - | tig0030662:19287-19306 | None:intergenic | 20.0% |
| !! | ATCAACAAAAAAGAAAAGAA+AGG | - | tig0030662:19335-19354 | None:intergenic | 20.0% |
| !!! | TTTTTTTATTGTTACGTTCA+TGG | + | tig0030662:19486-19505 | Msa1444150:intron | 20.0% |
| !!! | TAATTGGCTTTTTTTTTGTT+TGG | + | tig0030662:19530-19549 | Msa1444150:intron | 20.0% |
| !! | TTTACAATTCATTTGCAAAA+AGG | + | tig0030662:19844-19863 | Msa1444150:CDS | 20.0% |
| !! | ATTTGTGTTGAAATTTGAAA+AGG | + | tig0030662:21041-21060 | Msa1444150:CDS | 20.0% |
| !!! | ATTTATTCGAGAAACATTTT+TGG | + | tig0030662:21168-21187 | Msa1444150:intron | 20.0% |
| !!! | ATGTCAATTATATGAGTTTT+TGG | + | tig0030662:21347-21366 | Msa1444150:intron | 20.0% |
| !!! | TGTCAATTATATGAGTTTTT+GGG | + | tig0030662:21348-21367 | Msa1444150:intron | 20.0% |
| !!! | AATTCATTATATCTGATTTG+AGG | + | tig0030662:21604-21623 | Msa1444150:CDS | 20.0% |
| ! | CATATATAGTAATACTGCAT+TGG | + | tig0030662:17345-17364 | Msa1444150:intron | 25.0% |
| ! | TGGTTGTACAAATATCAATT+GGG | - | tig0030662:17477-17496 | None:intergenic | 25.0% |
| ! | ATGGTTGTACAAATATCAAT+TGG | - | tig0030662:17478-17497 | None:intergenic | 25.0% |
| ! | GTCAAAAAGTTGTTAGAAAA+TGG | - | tig0030662:17497-17516 | None:intergenic | 25.0% |
| ! | CATTCAATAAATGATGTATG+TGG | + | tig0030662:17622-17641 | Msa1444150:intron | 25.0% |
| !! | ATAATTTGATCGTAGCTTTT+TGG | - | tig0030662:18069-18088 | None:intergenic | 25.0% |
| !! | TAATTTGTATGTCAAGTCAT+TGG | - | tig0030662:18373-18392 | None:intergenic | 25.0% |
| ! | CCGACATGTTTAAAAATTTA+AGG | - | tig0030662:18523-18542 | None:intergenic | 25.0% |
| !! | ATTTTTAAACATGTCGGATT+TGG | + | tig0030662:18526-18545 | Msa1444150:intron | 25.0% |
| !!! | GATATGCTTAATTTTTTCCA+AGG | - | tig0030662:18775-18794 | None:intergenic | 25.0% |
| !!! | TTATTTTGTACTTGCTTAGA+TGG | + | tig0030662:18858-18877 | Msa1444150:intron | 25.0% |
| ! | TAAAATGAATGGTCATGATT+TGG | - | tig0030662:19005-19024 | None:intergenic | 25.0% |
| ! | TCAATTTAATTGTTAAGGTG+GGG | + | tig0030662:19050-19069 | Msa1444150:intron | 25.0% |
| ! | AATTGTGAATTGTTGTGTAT+TGG | - | tig0030662:19112-19131 | None:intergenic | 25.0% |
| ! | TACCTCTATATTGAAAAGAA+GGG | - | tig0030662:19220-19239 | None:intergenic | 25.0% |
| ! | TTACCTCTATATTGAAAAGA+AGG | - | tig0030662:19221-19240 | None:intergenic | 25.0% |
| ! | AAAAAATGGCCAAATTAGAA+AGG | - | tig0030662:19398-19417 | None:intergenic | 25.0% |
| ! | AGTAATCCTTCAACTATAAT+TGG | + | tig0030662:19514-19533 | Msa1444150:intron | 25.0% |
| ! | AAAAAGCCAATTATAGTTGA+AGG | - | tig0030662:19523-19542 | None:intergenic | 25.0% |
| ! | TTTATAAAAAACAGGTGCAT+TGG | + | tig0030662:19661-19680 | Msa1444150:intron | 25.0% |
| ! | ATTAAATAGTGAACCTTGTA+AGG | + | tig0030662:19785-19804 | Msa1444150:CDS | 25.0% |
| ! | TTAAATAGTGAACCTTGTAA+GGG | + | tig0030662:19786-19805 | Msa1444150:CDS | 25.0% |
| ! | AATTCATTTGCAAAAAGGAT+GGG | + | tig0030662:19849-19868 | Msa1444150:CDS | 25.0% |
| !!! | AAGTCTTGTTGAACATTTTA+AGG | + | tig0030662:20169-20188 | Msa1444150:CDS | 25.0% |
| !!! | TCGGATGATAAACTTTTTTT+GGG | + | tig0030662:20397-20416 | Msa1444150:intron | 25.0% |
| ! | ATATTACATCTCCAAATTGT+TGG | - | tig0030662:20448-20467 | None:intergenic | 25.0% |
| !!! | ATACTTGTTAGTCTTATATG+TGG | - | tig0030662:20480-20499 | None:intergenic | 25.0% |
| ! | TGATTATTCAATCCAACAAA+CGG | - | tig0030662:20517-20536 | None:intergenic | 25.0% |
| !!! | GTTGTTTGAAACTTTTCTTA+AGG | + | tig0030662:20600-20619 | Msa1444150:intron | 25.0% |
| ! | TCTTCAAAACTTTCTATACT+TGG | - | tig0030662:20826-20845 | None:intergenic | 25.0% |
| ! | AAACAGCTTCTATTATAAAC+TGG | - | tig0030662:20934-20953 | None:intergenic | 25.0% |
| ! | GTAAATTTCAAGATGAGATT+GGG | + | tig0030662:21190-21209 | Msa1444150:intron | 25.0% |
| ! | AAAAAGAAGATTAGCAAAGA+TGG | + | tig0030662:21231-21250 | Msa1444150:intron | 25.0% |
| !! | GTCAATTATATGAGTTTTTG+GGG | + | tig0030662:21349-21368 | Msa1444150:intron | 25.0% |
| !! | ATTTGATTTCTTCATTGCAA+TGG | - | tig0030662:21646-21665 | None:intergenic | 25.0% |
| ! | CAAAATTGTAGATTCAAAAG+TGG | + | tig0030662:21819-21838 | Msa1444150:CDS | 25.0% |
| ATGATATGGGAAATGTTAAC+CGG | + | tig0030662:17296-17315 | Msa1444150:intron | 30.0% | |
| TACAACTTTCATGACAACTT+TGG | - | tig0030662:17759-17778 | None:intergenic | 30.0% | |
| !! | TTACTTCATTTACTTTTGGG+TGG | - | tig0030662:17824-17843 | None:intergenic | 30.0% |
| ! | GATCATTTCCTTCATCTTTT+GGG | - | tig0030662:17869-17888 | None:intergenic | 30.0% |
| ! | AGATCATTTCCTTCATCTTT+TGG | - | tig0030662:17870-17889 | None:intergenic | 30.0% |
| GCTAATGGCCTAATAATATA+GGG | - | tig0030662:17934-17953 | None:intergenic | 30.0% | |
| ATCCTTAAACAACATCATCA+AGG | + | tig0030662:18249-18268 | Msa1444150:intron | 30.0% | |
| TTGCTTATAATTGACAACGA+AGG | + | tig0030662:18710-18729 | Msa1444150:intron | 30.0% | |
| ACCTCATTAAAAGTTTAGAG+TGG | + | tig0030662:18941-18960 | Msa1444150:intron | 30.0% | |
| ! | CCTCATTAAAAGTTTAGAGT+GGG | + | tig0030662:18942-18961 | Msa1444150:intron | 30.0% |
| ! | CTCATTAAAAGTTTAGAGTG+GGG | + | tig0030662:18943-18962 | Msa1444150:intron | 30.0% |
| TAAGTGTTTAGACTTACTCT+TGG | - | tig0030662:18980-18999 | None:intergenic | 30.0% | |
| AAGATAAATGTGTGTAGATG+TGG | - | tig0030662:19089-19108 | None:intergenic | 30.0% | |
| AAGAAAGGAATCAGAAAAAG+AGG | - | tig0030662:19320-19339 | None:intergenic | 30.0% | |
| AAATCGATGCCTTTCTAATT+TGG | + | tig0030662:19386-19405 | Msa1444150:intron | 30.0% | |
| TATAGTGCTATACTTATCGT+GGG | + | tig0030662:19452-19471 | Msa1444150:intron | 30.0% | |
| TTTAATTCCTCACCAACATT+AGG | - | tig0030662:19771-19790 | None:intergenic | 30.0% | |
| TAAATAGTGAACCTTGTAAG+GGG | + | tig0030662:19787-19806 | Msa1444150:CDS | 30.0% | |
| CAATTCATTTGCAAAAAGGA+TGG | + | tig0030662:19848-19867 | Msa1444150:CDS | 30.0% | |
| GTCTTTGTATGTTGTAATGA+AGG | + | tig0030662:19912-19931 | Msa1444150:CDS | 30.0% | |
| !! | TAGTTTGATTTGTGTCATCT+TGG | - | tig0030662:19974-19993 | None:intergenic | 30.0% |
| ! | GTTAAAAGAGGTACATTAGA+AGG | + | tig0030662:20041-20060 | Msa1444150:intron | 30.0% |
| ! | GCATATAAGACACACTTTTA+GGG | - | tig0030662:20118-20137 | None:intergenic | 30.0% |
| ! | CTAAAAGTGTGTCTTATATG+CGG | + | tig0030662:20117-20136 | Msa1444150:CDS | 30.0% |
| !! | GTTGAACATTTTAAGGAAGA+TGG | + | tig0030662:20176-20195 | Msa1444150:CDS | 30.0% |
| CAATTATTGCAAACAGAAAC+AGG | + | tig0030662:20328-20347 | Msa1444150:intron | 30.0% | |
| !!! | CTCGGATGATAAACTTTTTT+TGG | + | tig0030662:20396-20415 | Msa1444150:intron | 30.0% |
| !! | AGATTAGCTTACCAACAATT+TGG | + | tig0030662:20434-20453 | Msa1444150:intron | 30.0% |
| ATTATTCAATCCAACAAACG+GGG | - | tig0030662:20515-20534 | None:intergenic | 30.0% | |
| GATTATTCAATCCAACAAAC+GGG | - | tig0030662:20516-20535 | None:intergenic | 30.0% | |
| ! | TGAAACTTTTCTTAAGGCAA+TGG | + | tig0030662:20606-20625 | Msa1444150:intron | 30.0% |
| !!! | TAGAAAGTTTTGAAGAAGAC+TGG | + | tig0030662:20830-20849 | Msa1444150:intron | 30.0% |
| !!! | AATAGAAGCTGTTTTTTTGC+TGG | + | tig0030662:20940-20959 | Msa1444150:CDS | 30.0% |
| !!! | ATAGAAGCTGTTTTTTTGCT+GGG | + | tig0030662:20941-20960 | Msa1444150:CDS | 30.0% |
| TGTGTTGAAATTTGAAAAGG+CGG | + | tig0030662:21044-21063 | Msa1444150:CDS | 30.0% | |
| !!! | CTCTTTTTTCTACTTCTAAG+CGG | - | tig0030662:21077-21096 | None:intergenic | 30.0% |
| CTTAGAAGTAGAAAAAAGAG+AGG | + | tig0030662:21077-21096 | Msa1444150:CDS | 30.0% | |
| AAAGAGAGGATTATGAAAGT+AGG | + | tig0030662:21091-21110 | Msa1444150:CDS | 30.0% | |
| AAAAAACGCATATTGTCTAC+AGG | + | tig0030662:21117-21136 | Msa1444150:CDS | 30.0% | |
| AAAAACGCATATTGTCTACA+GGG | + | tig0030662:21118-21137 | Msa1444150:CDS | 30.0% | |
| GGTAAATTTCAAGATGAGAT+TGG | + | tig0030662:21189-21208 | Msa1444150:intron | 30.0% | |
| GAAACTTGATAGACATAGTT+AGG | - | tig0030662:21258-21277 | None:intergenic | 30.0% | |
| GTTTCTCGTTGATGTAAATT+TGG | + | tig0030662:21302-21321 | Msa1444150:intron | 30.0% | |
| !!! | CTCGTAATTTTTCAAGCAAA+AGG | + | tig0030662:21390-21409 | Msa1444150:CDS | 30.0% |
| TGCATCCTTCTTAATATCTT+TGG | - | tig0030662:21525-21544 | None:intergenic | 30.0% | |
| !! | AGCAAAGGTATTAGTTGATT+TGG | + | tig0030662:21557-21576 | Msa1444150:CDS | 30.0% |
| TCAAATTTAGCTATCAGTGA+TGG | + | tig0030662:21660-21679 | Msa1444150:CDS | 30.0% | |
| !!! | AGCAATTTTGGTTGACATTT+TGG | - | tig0030662:21707-21726 | None:intergenic | 30.0% |
| GGATTTCTAATAGTCAATTC+TGG | - | tig0030662:21750-21769 | None:intergenic | 30.0% | |
| ! | ATCAATTGGGTTGTGTTAAC+CGG | - | tig0030662:17464-17483 | None:intergenic | 35.0% |
| AGGGAGTAGAGAGAAAAAAA+AGG | - | tig0030662:17564-17583 | None:intergenic | 35.0% | |
| TGCTTATAATAGTGACCAGA+GGG | - | tig0030662:17700-17719 | None:intergenic | 35.0% | |
| TTGCTTATAATAGTGACCAG+AGG | - | tig0030662:17699-17718 | None:intergenic | 35.0% | |
| TTGCTTATAATAGTGACCAG+AGG | + | tig0030662:17699-17718 | Msa1444150:intron | 35.0% | |
| TGCTTATAATAGTGACCAGA+GGG | + | tig0030662:17700-17719 | Msa1444150:intron | 35.0% | |
| GTCAAAAATAATACTCCCTC+TGG | - | tig0030662:17718-17737 | None:intergenic | 35.0% | |
| !! | ATTTCCTTCATCTTTTGGGT+GGG | - | tig0030662:17865-17884 | None:intergenic | 35.0% |
| ATGGCCTAATAATATAGGGA+GGG | - | tig0030662:17930-17949 | None:intergenic | 35.0% | |
| AATGGCCTAATAATATAGGG+AGG | - | tig0030662:17931-17950 | None:intergenic | 35.0% | |
| GGCTAATGGCCTAATAATAT+AGG | - | tig0030662:17935-17954 | None:intergenic | 35.0% | |
| CCACTTTCTAAACAAGCATT+TGG | - | tig0030662:18000-18019 | None:intergenic | 35.0% | |
| CCAAATGCTTGTTTAGAAAG+TGG | + | tig0030662:17997-18016 | Msa1444150:intron | 35.0% | |
| !! | TTGATCGTAGCTTTTTGGTA+GGG | - | tig0030662:18064-18083 | None:intergenic | 35.0% |
| !! | TTTGATCGTAGCTTTTTGGT+AGG | - | tig0030662:18065-18084 | None:intergenic | 35.0% |
| !! | TGCCTTGATGATGTTGTTTA+AGG | - | tig0030662:18254-18273 | None:intergenic | 35.0% |
| TAATTGACAACGGAAAGAGT+AGG | - | tig0030662:18582-18601 | None:intergenic | 35.0% | |
| AGTATCTGCACCATATTTAC+CGG | + | tig0030662:18734-18753 | Msa1444150:intron | 35.0% | |
| ! | CCCACTCTAAACTTTTAATG+AGG | - | tig0030662:18945-18964 | None:intergenic | 35.0% |
| ! | TGCCCTTCTTTTCAATATAG+AGG | + | tig0030662:19215-19234 | Msa1444150:intron | 35.0% |
| GTATAGTGCTATACTTATCG+TGG | + | tig0030662:19451-19470 | Msa1444150:intron | 35.0% | |
| ! | TGTACAAGAAGTACAAATGG+AGG | - | tig0030662:19556-19575 | None:intergenic | 35.0% |
| ! | CCATGTACAAGAAGTACAAA+TGG | - | tig0030662:19559-19578 | None:intergenic | 35.0% |
| CCATTTGTACTTCTTGTACA+TGG | + | tig0030662:19556-19575 | Msa1444150:intron | 35.0% | |
| GGAATTCAAATCTGTGGAAA+AGG | + | tig0030662:19812-19831 | Msa1444150:intron | 35.0% | |
| !! | TTTGCAAAAAGGATGGGTTT+TGG | + | tig0030662:19855-19874 | Msa1444150:CDS | 35.0% |
| ! | ACCTCTTTTAACAACAAGTG+TGG | - | tig0030662:20033-20052 | None:intergenic | 35.0% |
| GAGGTACATTAGAAGGAAAT+TGG | + | tig0030662:20048-20067 | Msa1444150:intron | 35.0% | |
| ! | CGCATATAAGACACACTTTT+AGG | - | tig0030662:20119-20138 | None:intergenic | 35.0% |
| TTGCTACAATGTTCAGTGAA+GGG | + | tig0030662:20216-20235 | Msa1444150:intron | 35.0% | |
| CTTTCTCTAATAGGGATTGT+TGG | + | tig0030662:20246-20265 | Msa1444150:intron | 35.0% | |
| CGAAGAAAGAATTTAGACGT+TGG | + | tig0030662:20287-20306 | Msa1444150:intron | 35.0% | |
| TCCAATGTGATGAAGATTCT+CGG | + | tig0030662:20378-20397 | Msa1444150:intron | 35.0% | |
| AGTCAGAACGCTCATTTATA+TGG | + | tig0030662:20578-20597 | Msa1444150:intron | 35.0% | |
| ! | ACTTTTCTTAAGGCAATGGA+TGG | + | tig0030662:20610-20629 | Msa1444150:intron | 35.0% |
| TGGTCAGTTATGACAGATTT+GGG | - | tig0030662:20643-20662 | None:intergenic | 35.0% | |
| TTTCAATTCTCGCTTGAAAG+TGG | - | tig0030662:20785-20804 | None:intergenic | 35.0% | |
| AGCCGATTAATGATTGAGTA+CGG | + | tig0030662:20853-20872 | Msa1444150:CDS | 35.0% | |
| GTCCGTACTCAATCATTAAT+CGG | - | tig0030662:20858-20877 | None:intergenic | 35.0% | |
| ATTAATGATTGAGTACGGAC+TGG | + | tig0030662:20858-20877 | Msa1444150:CDS | 35.0% | |
| ACAACAATGAATGGCTTCAA+GGG | + | tig0030662:20881-20900 | Msa1444150:CDS | 35.0% | |
| GAAACACAGATTGCAAAATG+TGG | + | tig0030662:21324-21343 | Msa1444150:intron | 35.0% | |
| TGCAACGCTGCAAAATAAAA+TGG | - | tig0030662:21434-21453 | None:intergenic | 35.0% | |
| ! | GATACGACGAGTAATTTTGA+AGG | + | tig0030662:21486-21505 | Msa1444150:CDS | 35.0% |
| TGTCAACCAAAATTGCTTGT+CGG | + | tig0030662:21710-21729 | Msa1444150:CDS | 35.0% | |
| ACAAAAGGGAGAAAGAAGAA+TGG | + | tig0030662:21783-21802 | Msa1444150:CDS | 35.0% | |
| !!! | TTTTTTCTCTCTACTCCCTC+TGG | + | tig0030662:17565-17584 | Msa1444150:intron | 40.0% |
| !! | TTTCCTTCATCTTTTGGGTG+GGG | - | tig0030662:17864-17883 | None:intergenic | 40.0% |
| ! | CATTTCCTTCATCTTTTGGG+TGG | - | tig0030662:17866-17885 | None:intergenic | 40.0% |
| TGGCCTAATAATATAGGGAG+GGG | - | tig0030662:17929-17948 | None:intergenic | 40.0% | |
| AGTAGGCTAGTATGCCAAAA+TGG | + | tig0030662:18496-18515 | Msa1444150:intron | 40.0% | |
| AAGGTAATTGCAGCACATTC+CGG | - | tig0030662:18756-18775 | None:intergenic | 40.0% | |
| AGACTTACTCTTGGAGTCAA+TGG | - | tig0030662:18971-18990 | None:intergenic | 40.0% | |
| TTAACAATGGATGTAGCAGG+TGG | - | tig0030662:19190-19209 | None:intergenic | 40.0% | |
| TGCTTAACAATGGATGTAGC+AGG | - | tig0030662:19193-19212 | None:intergenic | 40.0% | |
| TTCTTGTACATGGTGTATCG+TGG | + | tig0030662:19566-19585 | Msa1444150:intron | 40.0% | |
| ! | ACAGGTGCATTGGTCAATTA+TGG | + | tig0030662:19671-19690 | Msa1444150:intron | 40.0% |
| ! | GTGCATTGGTCAATTATGGA+TGG | + | tig0030662:19675-19694 | Msa1444150:CDS | 40.0% |
| ! | TTCCACATTTGTTGACTGTG+TGG | - | tig0030662:19718-19737 | None:intergenic | 40.0% |
| TTGAATTCCATCCCCTTACA+AGG | - | tig0030662:19801-19820 | None:intergenic | 40.0% | |
| CATACAAAGACAGCTCTCTT+TGG | - | tig0030662:19903-19922 | None:intergenic | 40.0% | |
| AAGTGTTCTACTTCTCGAAC+TGG | + | tig0030662:19999-20018 | Msa1444150:CDS | 40.0% | |
| !! | GCCACACTTGTTGTTAAAAG+AGG | + | tig0030662:20029-20048 | Msa1444150:CDS | 40.0% |
| GAATGATCATAACCATCCCA+TGG | + | tig0030662:20088-20107 | Msa1444150:CDS | 40.0% | |
| !!! | ACACTTTTAGGGCTAACCAT+GGG | - | tig0030662:20107-20126 | None:intergenic | 40.0% |
| !! | CGGTGTCATAAAAGCATGAA+TGG | + | tig0030662:20137-20156 | Msa1444150:CDS | 40.0% |
| ATTGTAGCAACCTTTCCTGT+CGG | - | tig0030662:20206-20225 | None:intergenic | 40.0% | |
| GTTGCTACAATGTTCAGTGA+AGG | + | tig0030662:20215-20234 | Msa1444150:intron | 40.0% | |
| TGCTACAATGTTCAGTGAAG+GGG | + | tig0030662:20217-20236 | Msa1444150:intron | 40.0% | |
| ! | GGACTTGGCTTTCTCTAATA+GGG | + | tig0030662:20238-20257 | Msa1444150:intron | 40.0% |
| TCCGAGAATCTTCATCACAT+TGG | - | tig0030662:20382-20401 | None:intergenic | 40.0% | |
| CTGGTCAGTTATGACAGATT+TGG | - | tig0030662:20644-20663 | None:intergenic | 40.0% | |
| CAAATCTGTCATAACTGACC+AGG | + | tig0030662:20642-20661 | Msa1444150:intron | 40.0% | |
| TGTCATAACTGACCAGGATT+TGG | + | tig0030662:20648-20667 | Msa1444150:intron | 40.0% | |
| ! | TTGGCTATGAAAGCTGCTTT+AGG | + | tig0030662:20667-20686 | Msa1444150:intron | 40.0% |
| TCCTAATATGCCATAAGCAG+AGG | - | tig0030662:20720-20739 | None:intergenic | 40.0% | |
| GACAACAATGAATGGCTTCA+AGG | + | tig0030662:20880-20899 | Msa1444150:CDS | 40.0% | |
| ! | ATCTTGAGCATTGTAGTTGC+TGG | - | tig0030662:21280-21299 | None:intergenic | 40.0% |
| !! | AGTTTTTGGGGATATTGTGC+AGG | + | tig0030662:21361-21380 | Msa1444150:intron | 40.0% |
| CGCTGCAAAATAAAATGGTC+AGG | - | tig0030662:21429-21448 | None:intergenic | 40.0% | |
| GCACGCCAAAGATATTAAGA+AGG | + | tig0030662:21517-21536 | Msa1444150:CDS | 40.0% | |
| !! | ACATTTTGGCCAGATTCCAA+AGG | - | tig0030662:21693-21712 | None:intergenic | 40.0% |
| CACGCAATGCACAAACAAAA+GGG | + | tig0030662:21769-21788 | Msa1444150:CDS | 40.0% | |
| ! | AGAAAAGCATGTCATGAGTG+TGG | + | tig0030662:21879-21898 | Msa1444150:CDS | 40.0% |
| TCGTGTTTAGTTGTCTGGTC+TGG | - | tig0030662:17240-17259 | None:intergenic | 45.0% | |
| CCACATCGTGTTTAGTTGTC+TGG | - | tig0030662:17245-17264 | None:intergenic | 45.0% | |
| CCAGACAACTAAACACGATG+TGG | + | tig0030662:17242-17261 | Msa1444150:intron | 45.0% | |
| TGCTTCCTTAATCAGTGCTC+CGG | - | tig0030662:17327-17346 | None:intergenic | 45.0% | |
| TGGTTTCCTTAACCAGTGTC+CGG | + | tig0030662:17433-17452 | Msa1444150:intron | 45.0% | |
| !! | TTCCTTCATCTTTTGGGTGG+GGG | - | tig0030662:17863-17882 | None:intergenic | 45.0% |
| CTCATGAGTGTTAGTCAGTG+TGG | + | tig0030662:17888-17907 | Msa1444150:intron | 45.0% | |
| TAGTCAGTGTGGCACAATCA+TGG | + | tig0030662:17899-17918 | Msa1444150:intron | 45.0% | |
| CAGCCCCTCCCTATATTATT+AGG | + | tig0030662:17923-17942 | Msa1444150:intron | 45.0% | |
| GCAGCACATTCCGGTAAATA+TGG | - | tig0030662:18747-18766 | None:intergenic | 45.0% | |
| GGAATGTGCTGCAATTACCT+TGG | + | tig0030662:18755-18774 | Msa1444150:intron | 45.0% | |
| ATGTGTGTAGATGTGGAGAG+AGG | - | tig0030662:19082-19101 | None:intergenic | 45.0% | |
| ! | GAAGGGCATGTGCTTAACAA+TGG | - | tig0030662:19203-19222 | None:intergenic | 45.0% |
| AGCCACACAGTCAACAAATG+TGG | + | tig0030662:19713-19732 | Msa1444150:CDS | 45.0% | |
| TTAGCTGCTGCTCCTAATGT+TGG | + | tig0030662:19756-19775 | Msa1444150:CDS | 45.0% | |
| TAGTGAACCTTGTAAGGGGA+TGG | + | tig0030662:19791-19810 | Msa1444150:CDS | 45.0% | |
| GGGGATGGAATTCAAATCTG+TGG | + | tig0030662:19806-19825 | Msa1444150:intron | 45.0% | |
| !!! | TTTTAGGGCTAACCATGGGA+TGG | - | tig0030662:20103-20122 | None:intergenic | 45.0% |
| !!! | CACACTTTTAGGGCTAACCA+TGG | - | tig0030662:20108-20127 | None:intergenic | 45.0% |
| AAGGAAGATGGTATACCGAC+AGG | + | tig0030662:20188-20207 | Msa1444150:intron | 45.0% | |
| AGATGGTATACCGACAGGAA+AGG | + | tig0030662:20193-20212 | Msa1444150:intron | 45.0% | |
| AATGTTCAGTGAAGGGGACT+TGG | + | tig0030662:20223-20242 | Msa1444150:intron | 45.0% | |
| ! | GGGACTTGGCTTTCTCTAAT+AGG | + | tig0030662:20237-20256 | Msa1444150:intron | 45.0% |
| AATCCAACAAACGGGGCAAA+TGG | - | tig0030662:20508-20527 | None:intergenic | 45.0% | |
| CAGCTTTCATAGCCAAATCC+TGG | - | tig0030662:20663-20682 | None:intergenic | 45.0% | |
| GCCTCTGCTTATGGCATATT+AGG | + | tig0030662:20716-20735 | Msa1444150:intron | 45.0% | |
| !! | ACGGACTGGACAACAATGAA+TGG | + | tig0030662:20872-20891 | Msa1444150:CDS | 45.0% |
| GTCTACAGGGTCAAAACTTG+AGG | + | tig0030662:21131-21150 | Msa1444150:CDS | 45.0% | |
| GCATGCTCAACAAGAAGCAA+AGG | + | tig0030662:21542-21561 | Msa1444150:CDS | 45.0% | |
| ! | CAGTGATGGAGTTTCTCCTT+TGG | + | tig0030662:21674-21693 | Msa1444150:CDS | 45.0% |
| !! | GGAGTTTCTCCTTTGGAATC+TGG | + | tig0030662:21681-21700 | Msa1444150:CDS | 45.0% |
| CAACCAAAATTGCTTGTCGG+AGG | + | tig0030662:21713-21732 | Msa1444150:CDS | 45.0% | |
| ! | CTTCCTCCGACAAGCAATTT+TGG | - | tig0030662:21719-21738 | None:intergenic | 45.0% |
| !! | CCTTTTGTTTGTGCATTGCG+TGG | - | tig0030662:21771-21790 | None:intergenic | 45.0% |
| CCACGCAATGCACAAACAAA+AGG | + | tig0030662:21768-21787 | Msa1444150:CDS | 45.0% | |
| TGTCATGAGTGTGGTGAATC+TGG | + | tig0030662:21888-21907 | Msa1444150:CDS | 45.0% | |
| !! | TTATAAAAATTAAAAATGTT+TGG | - | tig0030662:18337-18356 | None:intergenic | 5.0% |
| !! | TTAATTATAATTAAAATGAA+TGG | - | tig0030662:19016-19035 | None:intergenic | 5.0% |
| !!! | TTCATTTTAATTATAATTAA+TGG | + | tig0030662:19016-19035 | Msa1444150:intron | 5.0% |
| GAAATGTTAACCGGTGTCCC+CGG | + | tig0030662:17305-17324 | Msa1444150:intron | 50.0% | |
| CTTCCTTAATCAGTGCTCCG+GGG | - | tig0030662:17325-17344 | None:intergenic | 50.0% | |
| GCTTCCTTAATCAGTGCTCC+GGG | - | tig0030662:17326-17345 | None:intergenic | 50.0% | |
| GTTGTGTTAACCGGTGCTTC+CGG | - | tig0030662:17455-17474 | None:intergenic | 50.0% | |
| ACAATGGATGTAGCAGGTGG+AGG | - | tig0030662:19187-19206 | None:intergenic | 50.0% | |
| TGCTGCTCCTAATGTTGGTG+AGG | + | tig0030662:19761-19780 | Msa1444150:CDS | 50.0% | |
| ! | ATGCCATTTGCCCCGTTTGT+TGG | + | tig0030662:20502-20521 | Msa1444150:intron | 50.0% |
| ! | CAGAGGCGATGTCTAGTTTC+TGG | - | tig0030662:20703-20722 | None:intergenic | 50.0% |
| CTAGACATCGCCTCTGCTTA+TGG | + | tig0030662:20707-20726 | Msa1444150:intron | 50.0% | |
| ! | TGATTTGAGGCGCACTCGTA+TGG | + | tig0030662:21617-21636 | Msa1444150:CDS | 50.0% |
| !! | TGTCCCCGGAGCACTGATTA+AGG | + | tig0030662:17319-17338 | Msa1444150:intron | 55.0% |
| ! | GTGCTTCCGGACACTGGTTA+AGG | - | tig0030662:17442-17461 | None:intergenic | 55.0% |
| ! | TAACCAGTGTCCGGAAGCAC+CGG | + | tig0030662:17442-17461 | Msa1444150:intron | 55.0% |
| AGCCCCCACCCAAAAGATGA+AGG | + | tig0030662:17858-17877 | Msa1444150:intron | 55.0% | |
| GCACGTGGGAAAGTGGCTAA+TGG | - | tig0030662:17949-17968 | None:intergenic | 55.0% | |
| AATCAGTGCTCCGGGGACAC+CGG | - | tig0030662:17318-17337 | None:intergenic | 60.0% | |
| TAACCGGTGCTTCCGGACAC+TGG | - | tig0030662:17448-17467 | None:intergenic | 60.0% | |
| ! | CAGGTTGGCACGTGGGAAAG+TGG | - | tig0030662:17956-17975 | None:intergenic | 60.0% |
| ! | CTAAGGGCAGGTTGGCACGT+GGG | - | tig0030662:17963-17982 | None:intergenic | 60.0% |
| TGCCAACCTGCCCTTAGCGT+GGG | + | tig0030662:17966-17985 | Msa1444150:intron | 60.0% | |
| ! | GCTAAGGGCAGGTTGGCACG+TGG | - | tig0030662:17964-17983 | None:intergenic | 65.0% |
| GTGCCAACCTGCCCTTAGCG+TGG | + | tig0030662:17965-17984 | Msa1444150:intron | 65.0% | |
| CAACCTGCCCTTAGCGTGGG+CGG | + | tig0030662:17969-17988 | Msa1444150:intron | 65.0% | |
| GGCAACTCCGCCCACGCTAA+GGG | - | tig0030662:17979-17998 | None:intergenic | 65.0% | |
| TGGCAACTCCGCCCACGCTA+AGG | - | tig0030662:17980-17999 | None:intergenic | 65.0% | |
| CGCCCACGCTAAGGGCAGGT+TGG | - | tig0030662:17971-17990 | None:intergenic | 70.0% | |
| ACTCCGCCCACGCTAAGGGC+AGG | - | tig0030662:17975-17994 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0030662 | gene | 17166 | 21953 | 17166 | ID=Msa1444150;Name=Msa1444150 |
| tig0030662 | mRNA | 17166 | 21953 | 17166 | ID=Msa1444150-mRNA-1;Parent=Msa1444150;Name=Msa1444150-mRNA-1;_AED=0.08;_eAED=0.13;_QI=0|0|0|0.75|0.28|0.25|8|0|462 |
| tig0030662 | exon | 17166 | 17171 | 17166 | ID=Msa1444150-mRNA-1:exon:14337;Parent=Msa1444150-mRNA-1 |
| tig0030662 | exon | 18111 | 18116 | 18111 | ID=Msa1444150-mRNA-1:exon:14338;Parent=Msa1444150-mRNA-1 |
| tig0030662 | exon | 19675 | 19824 | 19675 | ID=Msa1444150-mRNA-1:exon:14339;Parent=Msa1444150-mRNA-1 |
| tig0030662 | exon | 19834 | 20050 | 19834 | ID=Msa1444150-mRNA-1:exon:14340;Parent=Msa1444150-mRNA-1 |
| tig0030662 | exon | 20063 | 20197 | 20063 | ID=Msa1444150-mRNA-1:exon:14341;Parent=Msa1444150-mRNA-1 |
| tig0030662 | exon | 20845 | 20902 | 20845 | ID=Msa1444150-mRNA-1:exon:14342;Parent=Msa1444150-mRNA-1 |
| tig0030662 | exon | 20918 | 21163 | 20918 | ID=Msa1444150-mRNA-1:exon:14343;Parent=Msa1444150-mRNA-1 |
| tig0030662 | exon | 21383 | 21953 | 21383 | ID=Msa1444150-mRNA-1:exon:14344;Parent=Msa1444150-mRNA-1 |
| tig0030662 | CDS | 17166 | 17171 | 17166 | ID=Msa1444150-mRNA-1:cds;Parent=Msa1444150-mRNA-1 |
| tig0030662 | CDS | 18111 | 18116 | 18111 | ID=Msa1444150-mRNA-1:cds;Parent=Msa1444150-mRNA-1 |
| tig0030662 | CDS | 19675 | 19824 | 19675 | ID=Msa1444150-mRNA-1:cds;Parent=Msa1444150-mRNA-1 |
| tig0030662 | CDS | 19834 | 20050 | 19834 | ID=Msa1444150-mRNA-1:cds;Parent=Msa1444150-mRNA-1 |
| tig0030662 | CDS | 20063 | 20197 | 20063 | ID=Msa1444150-mRNA-1:cds;Parent=Msa1444150-mRNA-1 |
| tig0030662 | CDS | 20845 | 20902 | 20845 | ID=Msa1444150-mRNA-1:cds;Parent=Msa1444150-mRNA-1 |
| tig0030662 | CDS | 20918 | 21163 | 20918 | ID=Msa1444150-mRNA-1:cds;Parent=Msa1444150-mRNA-1 |
| tig0030662 | CDS | 21383 | 21953 | 21383 | ID=Msa1444150-mRNA-1:cds;Parent=Msa1444150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
