Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1444710 | sp|Q9SZL8|FRS5_ARATH | 41.121 | 107 | 58 | 1 | 174 | 275 | 429 | 535 | 3.03e-20 | 97.4 |
| Msa1444710 | sp|Q9SZL8|FRS5_ARATH | 36.486 | 148 | 72 | 5 | 36 | 166 | 59 | 201 | 1.93e-15 | 82.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1444710 | A0A6A5MW98 | 54.206 | 321 | 101 | 6 | 172 | 453 | 101 | 414 | 6.45e-105 | 328 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1444710 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1444150 | Msa1444710 | 0.993158 | 7.723570e-198 | -8.615850e-47 |
| Msa1208310 | Msa1444710 | 0.916577 | 1.506489e-85 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1444710 | MtrunA17_Chr5g0448761 | 42.991 | 107 | 56 | 1 | 174 | 275 | 420 | 526 | 1.82e-21 | 97.8 |
| Msa1444710 | MtrunA17_Chr5g0448761 | 36.765 | 136 | 67 | 5 | 45 | 166 | 59 | 189 | 3.28e-15 | 78.2 |
| Msa1444710 | MtrunA17_Chr1g0202341 | 38.095 | 126 | 66 | 3 | 165 | 280 | 397 | 520 | 4.33e-19 | 90.1 |
| Msa1444710 | MtrunA17_Chr1g0202341 | 30.058 | 173 | 101 | 6 | 10 | 170 | 17 | 181 | 2.17e-12 | 69.3 |
| Msa1444710 | MtrunA17_Chr1g0196541 | 37.398 | 123 | 64 | 2 | 146 | 255 | 309 | 431 | 1.92e-18 | 88.2 |
| Msa1444710 | MtrunA17_Chr5g0441581 | 37.838 | 111 | 64 | 1 | 150 | 255 | 349 | 459 | 2.70e-17 | 84.7 |
| Msa1444710 | MtrunA17_Chr2g0296781 | 42.529 | 87 | 45 | 1 | 174 | 255 | 345 | 431 | 1.04e-16 | 82.8 |
| Msa1444710 | MtrunA17_Chr5g0448511 | 39.252 | 107 | 60 | 1 | 174 | 275 | 192 | 298 | 1.21e-16 | 82.4 |
| Msa1444710 | MtrunA17_Chr6g0477261 | 42.529 | 87 | 45 | 1 | 174 | 255 | 234 | 320 | 1.22e-16 | 82.8 |
| Msa1444710 | MtrunA17_Chr3g0080351 | 34.545 | 110 | 67 | 1 | 171 | 275 | 416 | 525 | 2.41e-14 | 75.5 |
| Msa1444710 | MtrunA17_Chr1g0207551 | 30.909 | 110 | 71 | 1 | 171 | 275 | 382 | 491 | 4.81e-13 | 71.6 |
| Msa1444710 | MtrunA17_Chr2g0291581 | 32.500 | 120 | 76 | 1 | 155 | 269 | 390 | 509 | 9.20e-13 | 70.5 |
| Msa1444710 | MtrunA17_Chr3g0118611 | 33.051 | 118 | 71 | 3 | 164 | 275 | 287 | 402 | 3.15e-12 | 68.9 |
| Msa1444710 | MtrunA17_Chr3g0078041 | 36.207 | 116 | 53 | 6 | 45 | 146 | 49 | 157 | 1.09e-11 | 64.7 |
| Msa1444710 | MtrunA17_Chr2g0291591 | 32.353 | 136 | 66 | 7 | 44 | 166 | 62 | 184 | 3.70e-11 | 65.5 |
| Msa1444710 | MtrunA17_Chr5g0440451 | 31.897 | 116 | 70 | 3 | 165 | 275 | 394 | 505 | 7.00e-11 | 64.7 |
| Msa1444710 | MtrunA17_Chr7g0258861 | 31.250 | 128 | 69 | 5 | 42 | 157 | 6 | 126 | 8.02e-11 | 63.2 |
| Msa1444710 | MtrunA17_Chr1g0198761 | 26.012 | 173 | 120 | 2 | 112 | 284 | 362 | 526 | 8.51e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1444710 | AT4G38180.1 | 41.121 | 107 | 58 | 1 | 174 | 275 | 429 | 535 | 3.08e-21 | 97.4 |
| Msa1444710 | AT4G38180.1 | 36.486 | 148 | 72 | 5 | 36 | 166 | 59 | 201 | 1.96e-16 | 82.4 |
| Msa1444710 | AT4G15090.1 | 36.111 | 108 | 64 | 1 | 171 | 273 | 402 | 509 | 1.43e-17 | 86.3 |
| Msa1444710 | AT4G15090.5 | 36.111 | 108 | 64 | 1 | 171 | 273 | 402 | 509 | 1.43e-17 | 86.3 |
| Msa1444710 | AT4G15090.3 | 36.111 | 108 | 64 | 1 | 171 | 273 | 402 | 509 | 1.43e-17 | 86.3 |
| Msa1444710 | AT4G15090.2 | 36.111 | 108 | 64 | 1 | 171 | 273 | 402 | 509 | 1.43e-17 | 86.3 |
| Msa1444710 | AT4G15090.4 | 36.111 | 108 | 64 | 1 | 171 | 273 | 402 | 509 | 1.43e-17 | 86.3 |
| Msa1444710 | AT4G38170.1 | 33.645 | 107 | 66 | 1 | 174 | 275 | 194 | 300 | 6.09e-16 | 80.5 |
| Msa1444710 | AT3G22170.2 | 32.174 | 115 | 69 | 2 | 170 | 275 | 406 | 520 | 5.24e-14 | 75.1 |
| Msa1444710 | AT3G22170.1 | 32.174 | 115 | 69 | 2 | 170 | 275 | 406 | 520 | 5.24e-14 | 75.1 |
| Msa1444710 | AT2G27110.3 | 32.278 | 158 | 93 | 6 | 165 | 317 | 224 | 372 | 3.28e-13 | 72.4 |
| Msa1444710 | AT2G27110.2 | 32.278 | 158 | 93 | 6 | 165 | 317 | 369 | 517 | 3.81e-13 | 72.4 |
| Msa1444710 | AT2G27110.1 | 32.278 | 158 | 93 | 6 | 165 | 317 | 369 | 517 | 3.81e-13 | 72.4 |
| Msa1444710 | AT5G18960.2 | 35.043 | 117 | 66 | 3 | 171 | 280 | 523 | 636 | 2.40e-11 | 66.6 |
| Msa1444710 | AT5G18960.1 | 35.043 | 117 | 66 | 3 | 171 | 280 | 523 | 636 | 2.40e-11 | 66.6 |
| Msa1444710 | AT1G76320.1 | 25.967 | 181 | 112 | 4 | 171 | 346 | 339 | 502 | 7.80e-11 | 65.1 |
| Msa1444710 | AT1G76320.4 | 25.967 | 181 | 112 | 4 | 171 | 346 | 339 | 502 | 7.80e-11 | 65.1 |
| Msa1444710 | AT1G76320.2 | 25.967 | 181 | 112 | 4 | 171 | 346 | 339 | 502 | 7.99e-11 | 64.7 |
Find 56 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCCTCCGACAAGCAATTT+TGG | 0.188112 | tig0030801:-32175 | None:intergenic |
| TTTACAATTCATTTGCAAAA+AGG | 0.228560 | tig0030801:+30303 | Msa1444710:CDS |
| TGCATCCTTCTTAATATCTT+TGG | 0.239826 | tig0030801:-31981 | None:intergenic |
| AGCAAAGGTATTAGTTGATT+TGG | 0.254141 | tig0030801:+32016 | Msa1444710:CDS |
| ACAGGTGCATTGGTCAATTA+TGG | 0.275145 | tig0030801:+30130 | Msa1444710:intron |
| GAGGTACATTAGAAGGAAAT+TGG | 0.278387 | tig0030801:+30507 | Msa1444710:intron |
| GGAGTTTCTCCTTTGGAATC+TGG | 0.287253 | tig0030801:+32140 | Msa1444710:CDS |
| GGATTTCTAATAGTCAATTC+TGG | 0.312090 | tig0030801:-32206 | None:intergenic |
| CATACAAAGACAGCTCTCTT+TGG | 0.340587 | tig0030801:-30359 | None:intergenic |
| TATATAAAATTAGAGAATCT+TGG | 0.344745 | tig0030801:+31364 | Msa1444710:intron |
| TTTAATTCCTCACCAACATT+AGG | 0.347135 | tig0030801:-30227 | None:intergenic |
| ATTAAATAGTGAACCTTGTA+AGG | 0.348615 | tig0030801:+30244 | Msa1444710:CDS |
| CAGTGATGGAGTTTCTCCTT+TGG | 0.356600 | tig0030801:+32133 | Msa1444710:CDS |
| TAGTTTGATTTGTGTCATCT+TGG | 0.378031 | tig0030801:-30430 | None:intergenic |
| TGCAACGCTGCAAAATAAAA+TGG | 0.387426 | tig0030801:-31890 | None:intergenic |
| AAACAGCTTCTATTATAAAC+TGG | 0.392497 | tig0030801:-31390 | None:intergenic |
| GTCCGTACTCAATCATTAAT+CGG | 0.426232 | tig0030801:-31314 | None:intergenic |
| AAGTGTTCTACTTCTCGAAC+TGG | 0.426697 | tig0030801:+30458 | Msa1444710:CDS |
| CCACGCAATGCACAAACAAA+AGG | 0.435072 | tig0030801:+32227 | Msa1444710:CDS |
| GCCACACTTGTTGTTAAAAG+AGG | 0.437725 | tig0030801:+30488 | Msa1444710:CDS |
| GACAACAATGAATGGCTTCA+AGG | 0.439948 | tig0030801:+31339 | Msa1444710:CDS |
| AATTCATTATATCTGATTTG+AGG | 0.445916 | tig0030801:+32063 | Msa1444710:CDS |
| CGCTGCAAAATAAAATGGTC+AGG | 0.446582 | tig0030801:-31885 | None:intergenic |
| TGTCATGAGTGTGGTGAATC+TGG | 0.451337 | tig0030801:+32347 | Msa1444710:CDS |
| ATTTGTGTTGAAATTTGAAA+AGG | 0.454017 | tig0030801:+31500 | Msa1444710:CDS |
| TTGAATTCCATCCCCTTACA+AGG | 0.484462 | tig0030801:-30257 | None:intergenic |
| TTAGCTGCTGCTCCTAATGT+TGG | 0.490364 | tig0030801:+30215 | Msa1444710:CDS |
| AAAGAGAGGATTATGAAAGT+AGG | 0.500092 | tig0030801:+31550 | Msa1444710:CDS |
| ATTTGATTTCTTCATTGCAA+TGG | 0.501662 | tig0030801:-32102 | None:intergenic |
| CAAAATTGTAGATTCAAAAG+TGG | 0.511466 | tig0030801:+32278 | Msa1444710:CDS |
| GTCTTTGTATGTTGTAATGA+AGG | 0.517879 | tig0030801:+30371 | Msa1444710:CDS |
| TGATTTGAGGCGCACTCGTA+TGG | 0.520232 | tig0030801:+32076 | Msa1444710:CDS |
| TAGTGAACCTTGTAAGGGGA+TGG | 0.531310 | tig0030801:+30250 | Msa1444710:CDS |
| CACGCAATGCACAAACAAAA+GGG | 0.538817 | tig0030801:+32228 | Msa1444710:CDS |
| TGTCAACCAAAATTGCTTGT+CGG | 0.544243 | tig0030801:+32169 | Msa1444710:CDS |
| CGGTGTCATAAAAGCATGAA+TGG | 0.550442 | tig0030801:+30596 | Msa1444710:CDS |
| ACAAAAGGGAGAAAGAAGAA+TGG | 0.552574 | tig0030801:+32242 | Msa1444710:CDS |
| TCAAATTTAGCTATCAGTGA+TGG | 0.553213 | tig0030801:+32119 | Msa1444710:CDS |
| TTAAATAGTGAACCTTGTAA+GGG | 0.571595 | tig0030801:+30245 | Msa1444710:CDS |
| GCACGCCAAAGATATTAAGA+AGG | 0.572798 | tig0030801:+31976 | Msa1444710:CDS |
| ACAACAATGAATGGCTTCAA+GGG | 0.573168 | tig0030801:+31340 | Msa1444710:CDS |
| ACGGACTGGACAACAATGAA+TGG | 0.575271 | tig0030801:+31331 | Msa1444710:CDS |
| GTCTACAGGGTCAAAACTTG+AGG | 0.581238 | tig0030801:+31590 | Msa1444710:CDS |
| TGTGTTGAAATTTGAAAAGG+CGG | 0.586171 | tig0030801:+31503 | Msa1444710:CDS |
| AGCCGATTAATGATTGAGTA+CGG | 0.595364 | tig0030801:+31312 | Msa1444710:CDS |
| TGCTGCTCCTAATGTTGGTG+AGG | 0.601546 | tig0030801:+30220 | Msa1444710:CDS |
| GCATGCTCAACAAGAAGCAA+AGG | 0.605686 | tig0030801:+32001 | Msa1444710:CDS |
| TTCCACATTTGTTGACTGTG+TGG | 0.606600 | tig0030801:-30174 | None:intergenic |
| ATTAATGATTGAGTACGGAC+TGG | 0.607432 | tig0030801:+31317 | Msa1444710:CDS |
| GTGCATTGGTCAATTATGGA+TGG | 0.620199 | tig0030801:+30134 | Msa1444710:CDS |
| AGCCACACAGTCAACAAATG+TGG | 0.622019 | tig0030801:+30172 | Msa1444710:CDS |
| TAAATAGTGAACCTTGTAAG+GGG | 0.625905 | tig0030801:+30246 | Msa1444710:CDS |
| CAACCAAAATTGCTTGTCGG+AGG | 0.633822 | tig0030801:+32172 | Msa1444710:CDS |
| GAATGATCATAACCATCCCA+TGG | 0.640152 | tig0030801:+30547 | Msa1444710:CDS |
| CTAAAAGTGTGTCTTATATG+CGG | 0.670716 | tig0030801:+30576 | Msa1444710:CDS |
| AGAAAAGCATGTCATGAGTG+TGG | 0.709074 | tig0030801:+32338 | Msa1444710:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTAAAACTTTCTTTTTT+TGG | + | tig0030801:28019-28038 | Msa1444710:intron | 10.0% |
| !!! | TTTAATTTTAATTTTACGTA+CGG | + | tig0030801:28485-28504 | Msa1444710:intron | 10.0% |
| !!! | ATGAAATATGTTTTATTTTT+TGG | + | tig0030801:28912-28931 | Msa1444710:intron | 10.0% |
| !!! | TGAAATATGTTTTATTTTTT+GGG | + | tig0030801:28913-28932 | Msa1444710:intron | 10.0% |
| !! | TATGATCTATATTATTATTA+TGG | + | tig0030801:29105-29124 | Msa1444710:intron | 10.0% |
| !!! | TATGTCATAATTATAATTTT+TGG | - | tig0030801:29294-29313 | None:intergenic | 10.0% |
| !! | TTAATTCAATTTAATTGTTA+AGG | + | tig0030801:29504-29523 | Msa1444710:intron | 10.0% |
| !!! | CAATTATTTTTATAAAAAAC+AGG | + | tig0030801:30112-30131 | Msa1444710:intron | 10.0% |
| !! | AAATAATAGAGAGAAAAAAA+AGG | - | tig0030801:28173-28192 | None:intergenic | 15.0% |
| !! | ATGATATTTGTACAATTTAT+TGG | - | tig0030801:28242-28261 | None:intergenic | 15.0% |
| !!! | TTAATTTTAATTTTACGTAC+GGG | + | tig0030801:28486-28505 | Msa1444710:intron | 15.0% |
| !! | AAATATGTCTTTAATTAAGT+AGG | + | tig0030801:28939-28958 | Msa1444710:intron | 15.0% |
| !! | CATTCAATTAATAATATATG+TGG | - | tig0030801:29132-29151 | None:intergenic | 15.0% |
| !!! | TAAGCAAATTTTGAATTTTT+AGG | - | tig0030801:29157-29176 | None:intergenic | 15.0% |
| !! | AAAATCAAAATAAGTAGTTA+TGG | - | tig0030801:29265-29284 | None:intergenic | 15.0% |
| !! | GTAAATTAGAAAGAAAAAAA+TGG | - | tig0030801:29871-29890 | None:intergenic | 15.0% |
| !!! | CATTATCAATCAATTTTATT+TGG | + | tig0030801:30994-31013 | Msa1444710:intron | 15.0% |
| !! | TATATAAAATTAGAGAATCT+TGG | + | tig0030801:31364-31383 | Msa1444710:intron | 15.0% |
| !! | TACTAATTAGAGAAATGATA+TGG | + | tig0030801:27888-27907 | Msa1444710:intron | 20.0% |
| !! | ACTAATTAGAGAAATGATAT+GGG | + | tig0030801:27889-27908 | Msa1444710:intron | 20.0% |
| !! | TTGTACAAATACTATCAATT+GGG | - | tig0030801:28083-28102 | None:intergenic | 20.0% |
| !!! | CATTTACTTCATTTACTTTT+GGG | - | tig0030801:28287-28306 | None:intergenic | 20.0% |
| !!! | TCATTTACTTCATTTACTTT+TGG | - | tig0030801:28288-28307 | None:intergenic | 20.0% |
| !! | AAATGAAGTAAATGAGTAAA+AGG | + | tig0030801:28293-28312 | Msa1444710:intron | 20.0% |
| !!! | TAAAAATTTAAGGTCCATTT+TGG | - | tig0030801:28973-28992 | None:intergenic | 20.0% |
| !!! | CCTTAAATTTTTAAACATGT+CGG | + | tig0030801:28980-28999 | Msa1444710:intron | 20.0% |
| !!! | AATTTGCTTATAATTGACAA+CGG | - | tig0030801:29167-29186 | None:intergenic | 20.0% |
| !! | ATTCAATTTAATTGTTAAGG+TGG | + | tig0030801:29507-29526 | Msa1444710:intron | 20.0% |
| !! | TTCAATTTAATTGTTAAGGT+GGG | + | tig0030801:29508-29527 | Msa1444710:intron | 20.0% |
| !! | TGCCAATTTCTTATATAATT+AGG | + | tig0030801:29741-29760 | Msa1444710:intron | 20.0% |
| !! | GCCAATTTCTTATATAATTA+GGG | + | tig0030801:29742-29761 | Msa1444710:intron | 20.0% |
| !! | ACCCTAATTATATAAGAAAT+TGG | - | tig0030801:29746-29765 | None:intergenic | 20.0% |
| !! | ATCAACAAAAAAGAAAAGAA+AGG | - | tig0030801:29794-29813 | None:intergenic | 20.0% |
| !!! | TTTTTTTATTGTTACGTTCA+TGG | + | tig0030801:29945-29964 | Msa1444710:intron | 20.0% |
| !!! | TAATTGGCTTTTTTTTTGTT+TGG | + | tig0030801:29989-30008 | Msa1444710:intron | 20.0% |
| !! | TTTACAATTCATTTGCAAAA+AGG | + | tig0030801:30303-30322 | Msa1444710:CDS | 20.0% |
| !! | ATTTGTGTTGAAATTTGAAA+AGG | + | tig0030801:31500-31519 | Msa1444710:CDS | 20.0% |
| !!! | ATTTATTCGAGAAACATTTT+TGG | + | tig0030801:31627-31646 | Msa1444710:intron | 20.0% |
| !!! | ATGTCAATTATATGAGTTTT+TGG | + | tig0030801:31806-31825 | Msa1444710:intron | 20.0% |
| !!! | TGTCAATTATATGAGTTTTT+GGG | + | tig0030801:31807-31826 | Msa1444710:intron | 20.0% |
| !!! | AATTCATTATATCTGATTTG+AGG | + | tig0030801:32063-32082 | Msa1444710:CDS | 20.0% |
| ! | CATATATAGTAATACTGCAT+TGG | + | tig0030801:27951-27970 | Msa1444710:intron | 25.0% |
| ! | GTTGTACAAATACTATCAAT+TGG | - | tig0030801:28084-28103 | None:intergenic | 25.0% |
| ! | GTCAAAAAGTTGTTAGAAAA+TGG | - | tig0030801:28106-28125 | None:intergenic | 25.0% |
| !! | TACAACTTTTATGACAACTT+TGG | - | tig0030801:28219-28238 | None:intergenic | 25.0% |
| !! | ATAATTTGATCGTAGCTTTT+TGG | - | tig0030801:28529-28548 | None:intergenic | 25.0% |
| !! | TAATTTGTATGTCAAGTCAT+TGG | - | tig0030801:28833-28852 | None:intergenic | 25.0% |
| ! | CCGACATGTTTAAAAATTTA+AGG | - | tig0030801:28983-29002 | None:intergenic | 25.0% |
| !! | ATTTTTAAACATGTCGGATT+TGG | + | tig0030801:28986-29005 | Msa1444710:intron | 25.0% |
| !!! | GATATGCTTAATTTTTTCCA+AGG | - | tig0030801:29235-29254 | None:intergenic | 25.0% |
| !!! | TTATTTTGTACTTGCTTAGA+TGG | + | tig0030801:29317-29336 | Msa1444710:intron | 25.0% |
| ! | TAAAATGAATGGTCATGATT+TGG | - | tig0030801:29464-29483 | None:intergenic | 25.0% |
| ! | TCAATTTAATTGTTAAGGTG+GGG | + | tig0030801:29509-29528 | Msa1444710:intron | 25.0% |
| ! | AATTGTGAATTGTTGTGTAT+TGG | - | tig0030801:29571-29590 | None:intergenic | 25.0% |
| ! | TACCTCTATATTGAAAAGAA+GGG | - | tig0030801:29679-29698 | None:intergenic | 25.0% |
| ! | TTACCTCTATATTGAAAAGA+AGG | - | tig0030801:29680-29699 | None:intergenic | 25.0% |
| ! | AAAAAATGGCCAAATTAGAA+AGG | - | tig0030801:29857-29876 | None:intergenic | 25.0% |
| ! | AGTAATCCTTCAACTATAAT+TGG | + | tig0030801:29973-29992 | Msa1444710:intron | 25.0% |
| ! | AAAAAGCCAATTATAGTTGA+AGG | - | tig0030801:29982-30001 | None:intergenic | 25.0% |
| ! | TTTATAAAAAACAGGTGCAT+TGG | + | tig0030801:30120-30139 | Msa1444710:intron | 25.0% |
| ! | ATTAAATAGTGAACCTTGTA+AGG | + | tig0030801:30244-30263 | Msa1444710:CDS | 25.0% |
| ! | TTAAATAGTGAACCTTGTAA+GGG | + | tig0030801:30245-30264 | Msa1444710:CDS | 25.0% |
| ! | AATTCATTTGCAAAAAGGAT+GGG | + | tig0030801:30308-30327 | Msa1444710:CDS | 25.0% |
| !!! | AAGTCTTGTTGAACATTTTA+AGG | + | tig0030801:30628-30647 | Msa1444710:CDS | 25.0% |
| !!! | TCGGATGATAAACTTTTTTT+GGG | + | tig0030801:30856-30875 | Msa1444710:intron | 25.0% |
| ! | ATATTACATCTCCAAATTGT+TGG | - | tig0030801:30907-30926 | None:intergenic | 25.0% |
| !!! | ATACTTGTTAGTCTTATATG+TGG | - | tig0030801:30939-30958 | None:intergenic | 25.0% |
| ! | TGATTATTCAATCCAACAAA+CGG | - | tig0030801:30976-30995 | None:intergenic | 25.0% |
| !!! | GTTGTTTGAAACTTTTCTTA+AGG | + | tig0030801:31059-31078 | Msa1444710:intron | 25.0% |
| ! | TCTTCAAAACTTTCTATACT+TGG | - | tig0030801:31285-31304 | None:intergenic | 25.0% |
| ! | AAACAGCTTCTATTATAAAC+TGG | - | tig0030801:31393-31412 | None:intergenic | 25.0% |
| ! | GTAAATTTCAAGATGAGATT+GGG | + | tig0030801:31649-31668 | Msa1444710:intron | 25.0% |
| ! | AAAAAGAAGATTAGCAAAGA+TGG | + | tig0030801:31690-31709 | Msa1444710:intron | 25.0% |
| !! | GTCAATTATATGAGTTTTTG+GGG | + | tig0030801:31808-31827 | Msa1444710:intron | 25.0% |
| !! | ATTTGATTTCTTCATTGCAA+TGG | - | tig0030801:32105-32124 | None:intergenic | 25.0% |
| ! | CAAAATTGTAGATTCAAAAG+TGG | + | tig0030801:32278-32297 | Msa1444710:CDS | 25.0% |
| ATGATATGGGAAATGTTAAC+CGG | + | tig0030801:27902-27921 | Msa1444710:intron | 30.0% | |
| !! | TTACTTCATTTACTTTTGGG+TGG | - | tig0030801:28284-28303 | None:intergenic | 30.0% |
| ! | GATCATTTCCTTCATCTTTT+GGG | - | tig0030801:28329-28348 | None:intergenic | 30.0% |
| ! | AGATCATTTCCTTCATCTTT+TGG | - | tig0030801:28330-28349 | None:intergenic | 30.0% |
| GCTAATGGCCTAATAATATA+GGG | - | tig0030801:28394-28413 | None:intergenic | 30.0% | |
| ATCCTTAAACAACATCATCA+AGG | + | tig0030801:28709-28728 | Msa1444710:intron | 30.0% | |
| TTGCTTATAATTGACAACGA+AGG | + | tig0030801:29170-29189 | Msa1444710:intron | 30.0% | |
| ACCTCATTAAAAGTTTAGAG+TGG | + | tig0030801:29400-29419 | Msa1444710:intron | 30.0% | |
| ! | CCTCATTAAAAGTTTAGAGT+GGG | + | tig0030801:29401-29420 | Msa1444710:intron | 30.0% |
| ! | CTCATTAAAAGTTTAGAGTG+GGG | + | tig0030801:29402-29421 | Msa1444710:intron | 30.0% |
| TAAGTGTTTAGACTTACTCT+TGG | - | tig0030801:29439-29458 | None:intergenic | 30.0% | |
| AAGATAAATGTGTGTAGATG+TGG | - | tig0030801:29548-29567 | None:intergenic | 30.0% | |
| AAGAAAGGAATCAGAAAAAG+AGG | - | tig0030801:29779-29798 | None:intergenic | 30.0% | |
| AAATCGATGCCTTTCTAATT+TGG | + | tig0030801:29845-29864 | Msa1444710:intron | 30.0% | |
| TATAGTGCTATACTTATCGT+GGG | + | tig0030801:29911-29930 | Msa1444710:intron | 30.0% | |
| TTTAATTCCTCACCAACATT+AGG | - | tig0030801:30230-30249 | None:intergenic | 30.0% | |
| TAAATAGTGAACCTTGTAAG+GGG | + | tig0030801:30246-30265 | Msa1444710:CDS | 30.0% | |
| CAATTCATTTGCAAAAAGGA+TGG | + | tig0030801:30307-30326 | Msa1444710:CDS | 30.0% | |
| GTCTTTGTATGTTGTAATGA+AGG | + | tig0030801:30371-30390 | Msa1444710:CDS | 30.0% | |
| !! | TAGTTTGATTTGTGTCATCT+TGG | - | tig0030801:30433-30452 | None:intergenic | 30.0% |
| ! | GTTAAAAGAGGTACATTAGA+AGG | + | tig0030801:30500-30519 | Msa1444710:intron | 30.0% |
| ! | GCATATAAGACACACTTTTA+GGG | - | tig0030801:30577-30596 | None:intergenic | 30.0% |
| ! | CTAAAAGTGTGTCTTATATG+CGG | + | tig0030801:30576-30595 | Msa1444710:CDS | 30.0% |
| !! | GTTGAACATTTTAAGGAAGA+TGG | + | tig0030801:30635-30654 | Msa1444710:CDS | 30.0% |
| CAATTATTGCAAACAGAAAC+AGG | + | tig0030801:30787-30806 | Msa1444710:intron | 30.0% | |
| !!! | CTCGGATGATAAACTTTTTT+TGG | + | tig0030801:30855-30874 | Msa1444710:intron | 30.0% |
| !! | AGATTAGCTTACCAACAATT+TGG | + | tig0030801:30893-30912 | Msa1444710:intron | 30.0% |
| ATTATTCAATCCAACAAACG+GGG | - | tig0030801:30974-30993 | None:intergenic | 30.0% | |
| GATTATTCAATCCAACAAAC+GGG | - | tig0030801:30975-30994 | None:intergenic | 30.0% | |
| ! | TGAAACTTTTCTTAAGGCAA+TGG | + | tig0030801:31065-31084 | Msa1444710:intron | 30.0% |
| !!! | TAGAAAGTTTTGAAGAAGAC+TGG | + | tig0030801:31289-31308 | Msa1444710:intron | 30.0% |
| !!! | AATAGAAGCTGTTTTTTTGC+TGG | + | tig0030801:31399-31418 | Msa1444710:CDS | 30.0% |
| !!! | ATAGAAGCTGTTTTTTTGCT+GGG | + | tig0030801:31400-31419 | Msa1444710:CDS | 30.0% |
| TGTGTTGAAATTTGAAAAGG+CGG | + | tig0030801:31503-31522 | Msa1444710:CDS | 30.0% | |
| !!! | CTCTTTTTTCTACTTCTAAG+CGG | - | tig0030801:31536-31555 | None:intergenic | 30.0% |
| CTTAGAAGTAGAAAAAAGAG+AGG | + | tig0030801:31536-31555 | Msa1444710:CDS | 30.0% | |
| AAAGAGAGGATTATGAAAGT+AGG | + | tig0030801:31550-31569 | Msa1444710:CDS | 30.0% | |
| AAAAAACGCATATTGTCTAC+AGG | + | tig0030801:31576-31595 | Msa1444710:CDS | 30.0% | |
| AAAAACGCATATTGTCTACA+GGG | + | tig0030801:31577-31596 | Msa1444710:CDS | 30.0% | |
| GGTAAATTTCAAGATGAGAT+TGG | + | tig0030801:31648-31667 | Msa1444710:intron | 30.0% | |
| GAAACTTGATAGACATAGTT+AGG | - | tig0030801:31717-31736 | None:intergenic | 30.0% | |
| GTTTCTCGTTGATGTAAATT+TGG | + | tig0030801:31761-31780 | Msa1444710:intron | 30.0% | |
| !!! | CTCGTAATTTTTCAAGCAAA+AGG | + | tig0030801:31849-31868 | Msa1444710:CDS | 30.0% |
| TGCATCCTTCTTAATATCTT+TGG | - | tig0030801:31984-32003 | None:intergenic | 30.0% | |
| !! | AGCAAAGGTATTAGTTGATT+TGG | + | tig0030801:32016-32035 | Msa1444710:CDS | 30.0% |
| TCAAATTTAGCTATCAGTGA+TGG | + | tig0030801:32119-32138 | Msa1444710:CDS | 30.0% | |
| !!! | AGCAATTTTGGTTGACATTT+TGG | - | tig0030801:32166-32185 | None:intergenic | 30.0% |
| GGATTTCTAATAGTCAATTC+TGG | - | tig0030801:32209-32228 | None:intergenic | 30.0% | |
| ! | ATCAATTGGGTTGTGTTAAC+CGG | - | tig0030801:28070-28089 | None:intergenic | 35.0% |
| !! | ATTTCCTTCATCTTTTGGGT+GGG | - | tig0030801:28325-28344 | None:intergenic | 35.0% |
| ATGGCCTAATAATATAGGGA+GGG | - | tig0030801:28390-28409 | None:intergenic | 35.0% | |
| AATGGCCTAATAATATAGGG+AGG | - | tig0030801:28391-28410 | None:intergenic | 35.0% | |
| GGCTAATGGCCTAATAATAT+AGG | - | tig0030801:28395-28414 | None:intergenic | 35.0% | |
| CCACTTTCTAAACAAGCATT+TGG | - | tig0030801:28460-28479 | None:intergenic | 35.0% | |
| CCAAATGCTTGTTTAGAAAG+TGG | + | tig0030801:28457-28476 | Msa1444710:intron | 35.0% | |
| !! | TTGATCGTAGCTTTTTGGTA+GGG | - | tig0030801:28524-28543 | None:intergenic | 35.0% |
| !! | TTTGATCGTAGCTTTTTGGT+AGG | - | tig0030801:28525-28544 | None:intergenic | 35.0% |
| !! | TGCCTTGATGATGTTGTTTA+AGG | - | tig0030801:28714-28733 | None:intergenic | 35.0% |
| TAATTGACAACGGAAAGAGT+AGG | - | tig0030801:29042-29061 | None:intergenic | 35.0% | |
| AGTATCTGCACCATATTTAC+CGG | + | tig0030801:29194-29213 | Msa1444710:intron | 35.0% | |
| ! | CCCACTCTAAACTTTTAATG+AGG | - | tig0030801:29404-29423 | None:intergenic | 35.0% |
| ! | TGCCCTTCTTTTCAATATAG+AGG | + | tig0030801:29674-29693 | Msa1444710:intron | 35.0% |
| GTATAGTGCTATACTTATCG+TGG | + | tig0030801:29910-29929 | Msa1444710:intron | 35.0% | |
| ! | TGTACAAGAAGTACAAATGG+AGG | - | tig0030801:30015-30034 | None:intergenic | 35.0% |
| ! | CCATGTACAAGAAGTACAAA+TGG | - | tig0030801:30018-30037 | None:intergenic | 35.0% |
| CCATTTGTACTTCTTGTACA+TGG | + | tig0030801:30015-30034 | Msa1444710:intron | 35.0% | |
| GGAATTCAAATCTGTGGAAA+AGG | + | tig0030801:30271-30290 | Msa1444710:intron | 35.0% | |
| !! | TTTGCAAAAAGGATGGGTTT+TGG | + | tig0030801:30314-30333 | Msa1444710:CDS | 35.0% |
| ! | ACCTCTTTTAACAACAAGTG+TGG | - | tig0030801:30492-30511 | None:intergenic | 35.0% |
| GAGGTACATTAGAAGGAAAT+TGG | + | tig0030801:30507-30526 | Msa1444710:intron | 35.0% | |
| ! | CGCATATAAGACACACTTTT+AGG | - | tig0030801:30578-30597 | None:intergenic | 35.0% |
| TTGCTACAATGTTCAGTGAA+GGG | + | tig0030801:30675-30694 | Msa1444710:intron | 35.0% | |
| CTTTCTCTAATAGGGATTGT+TGG | + | tig0030801:30705-30724 | Msa1444710:intron | 35.0% | |
| CGAAGAAAGAATTTAGACGT+TGG | + | tig0030801:30746-30765 | Msa1444710:intron | 35.0% | |
| TCCAATGTGATGAAGATTCT+CGG | + | tig0030801:30837-30856 | Msa1444710:intron | 35.0% | |
| AGTCAGAACGCTCATTTATA+TGG | + | tig0030801:31037-31056 | Msa1444710:intron | 35.0% | |
| ! | ACTTTTCTTAAGGCAATGGA+TGG | + | tig0030801:31069-31088 | Msa1444710:intron | 35.0% |
| TGGTCAGTTATGACAGATTT+GGG | - | tig0030801:31102-31121 | None:intergenic | 35.0% | |
| TTTCAATTCTCGCTTGAAAG+TGG | - | tig0030801:31244-31263 | None:intergenic | 35.0% | |
| AGCCGATTAATGATTGAGTA+CGG | + | tig0030801:31312-31331 | Msa1444710:CDS | 35.0% | |
| GTCCGTACTCAATCATTAAT+CGG | - | tig0030801:31317-31336 | None:intergenic | 35.0% | |
| ATTAATGATTGAGTACGGAC+TGG | + | tig0030801:31317-31336 | Msa1444710:CDS | 35.0% | |
| ACAACAATGAATGGCTTCAA+GGG | + | tig0030801:31340-31359 | Msa1444710:CDS | 35.0% | |
| GAAACACAGATTGCAAAATG+TGG | + | tig0030801:31783-31802 | Msa1444710:intron | 35.0% | |
| TGCAACGCTGCAAAATAAAA+TGG | - | tig0030801:31893-31912 | None:intergenic | 35.0% | |
| ! | GATACGACGAGTAATTTTGA+AGG | + | tig0030801:31945-31964 | Msa1444710:CDS | 35.0% |
| TGTCAACCAAAATTGCTTGT+CGG | + | tig0030801:32169-32188 | Msa1444710:CDS | 35.0% | |
| ACAAAAGGGAGAAAGAAGAA+TGG | + | tig0030801:32242-32261 | Msa1444710:CDS | 35.0% | |
| !! | TTTCCTTCATCTTTTGGGTG+GGG | - | tig0030801:28324-28343 | None:intergenic | 40.0% |
| ! | CATTTCCTTCATCTTTTGGG+TGG | - | tig0030801:28326-28345 | None:intergenic | 40.0% |
| TGGCCTAATAATATAGGGAG+GGG | - | tig0030801:28389-28408 | None:intergenic | 40.0% | |
| AGTAGGCTAGTATGCCAAAA+TGG | + | tig0030801:28956-28975 | Msa1444710:intron | 40.0% | |
| AAGGTAATTGCAGCACATTC+CGG | - | tig0030801:29216-29235 | None:intergenic | 40.0% | |
| AGACTTACTCTTGGAGTCAA+TGG | - | tig0030801:29430-29449 | None:intergenic | 40.0% | |
| TTAACAATGGATGTAGCAGG+TGG | - | tig0030801:29649-29668 | None:intergenic | 40.0% | |
| TGCTTAACAATGGATGTAGC+AGG | - | tig0030801:29652-29671 | None:intergenic | 40.0% | |
| TTCTTGTACATGGTGTATCG+TGG | + | tig0030801:30025-30044 | Msa1444710:intron | 40.0% | |
| ! | ACAGGTGCATTGGTCAATTA+TGG | + | tig0030801:30130-30149 | Msa1444710:intron | 40.0% |
| ! | GTGCATTGGTCAATTATGGA+TGG | + | tig0030801:30134-30153 | Msa1444710:CDS | 40.0% |
| ! | TTCCACATTTGTTGACTGTG+TGG | - | tig0030801:30177-30196 | None:intergenic | 40.0% |
| TTGAATTCCATCCCCTTACA+AGG | - | tig0030801:30260-30279 | None:intergenic | 40.0% | |
| CATACAAAGACAGCTCTCTT+TGG | - | tig0030801:30362-30381 | None:intergenic | 40.0% | |
| AAGTGTTCTACTTCTCGAAC+TGG | + | tig0030801:30458-30477 | Msa1444710:CDS | 40.0% | |
| !! | GCCACACTTGTTGTTAAAAG+AGG | + | tig0030801:30488-30507 | Msa1444710:CDS | 40.0% |
| GAATGATCATAACCATCCCA+TGG | + | tig0030801:30547-30566 | Msa1444710:CDS | 40.0% | |
| !!! | ACACTTTTAGGGCTAACCAT+GGG | - | tig0030801:30566-30585 | None:intergenic | 40.0% |
| !! | CGGTGTCATAAAAGCATGAA+TGG | + | tig0030801:30596-30615 | Msa1444710:CDS | 40.0% |
| ATTGTAGCAACCTTTCCTGT+CGG | - | tig0030801:30665-30684 | None:intergenic | 40.0% | |
| GTTGCTACAATGTTCAGTGA+AGG | + | tig0030801:30674-30693 | Msa1444710:intron | 40.0% | |
| TGCTACAATGTTCAGTGAAG+GGG | + | tig0030801:30676-30695 | Msa1444710:intron | 40.0% | |
| ! | GGACTTGGCTTTCTCTAATA+GGG | + | tig0030801:30697-30716 | Msa1444710:intron | 40.0% |
| TCCGAGAATCTTCATCACAT+TGG | - | tig0030801:30841-30860 | None:intergenic | 40.0% | |
| CTGGTCAGTTATGACAGATT+TGG | - | tig0030801:31103-31122 | None:intergenic | 40.0% | |
| CAAATCTGTCATAACTGACC+AGG | + | tig0030801:31101-31120 | Msa1444710:intron | 40.0% | |
| TGTCATAACTGACCAGGATT+TGG | + | tig0030801:31107-31126 | Msa1444710:intron | 40.0% | |
| ! | TTGGCTATGAAAGCTGCTTT+AGG | + | tig0030801:31126-31145 | Msa1444710:intron | 40.0% |
| TCCTAATATGCCATAAGCAG+AGG | - | tig0030801:31179-31198 | None:intergenic | 40.0% | |
| GACAACAATGAATGGCTTCA+AGG | + | tig0030801:31339-31358 | Msa1444710:CDS | 40.0% | |
| ! | ATCTTGAGCATTGTAGTTGC+TGG | - | tig0030801:31739-31758 | None:intergenic | 40.0% |
| !! | AGTTTTTGGGGATATTGTGC+AGG | + | tig0030801:31820-31839 | Msa1444710:intron | 40.0% |
| CGCTGCAAAATAAAATGGTC+AGG | - | tig0030801:31888-31907 | None:intergenic | 40.0% | |
| GCACGCCAAAGATATTAAGA+AGG | + | tig0030801:31976-31995 | Msa1444710:CDS | 40.0% | |
| !! | ACATTTTGGCCAGATTCCAA+AGG | - | tig0030801:32152-32171 | None:intergenic | 40.0% |
| CACGCAATGCACAAACAAAA+GGG | + | tig0030801:32228-32247 | Msa1444710:CDS | 40.0% | |
| ! | AGAAAAGCATGTCATGAGTG+TGG | + | tig0030801:32338-32357 | Msa1444710:CDS | 40.0% |
| TCGTGTTTAGTTGTCTGGTC+TGG | - | tig0030801:27846-27865 | None:intergenic | 45.0% | |
| CCACATCGTGTTTAGTTGTC+TGG | - | tig0030801:27851-27870 | None:intergenic | 45.0% | |
| CCAGACAACTAAACACGATG+TGG | + | tig0030801:27848-27867 | Msa1444710:intron | 45.0% | |
| TGGTTTCCTTAACCAGTGTC+CGG | + | tig0030801:28039-28058 | Msa1444710:intron | 45.0% | |
| !! | TTCCTTCATCTTTTGGGTGG+GGG | - | tig0030801:28323-28342 | None:intergenic | 45.0% |
| CTCATGAGTGTTAGTCAGTG+TGG | + | tig0030801:28348-28367 | Msa1444710:intron | 45.0% | |
| TAGTCAGTGTGGCACAATCA+TGG | + | tig0030801:28359-28378 | Msa1444710:intron | 45.0% | |
| CAGCCCCTCCCTATATTATT+AGG | + | tig0030801:28383-28402 | Msa1444710:intron | 45.0% | |
| GCAGCACATTCCGGTAAATA+TGG | - | tig0030801:29207-29226 | None:intergenic | 45.0% | |
| GGAATGTGCTGCAATTACCT+TGG | + | tig0030801:29215-29234 | Msa1444710:intron | 45.0% | |
| ATGTGTGTAGATGTGGAGAG+AGG | - | tig0030801:29541-29560 | None:intergenic | 45.0% | |
| ! | GAAGGGCATGTGCTTAACAA+TGG | - | tig0030801:29662-29681 | None:intergenic | 45.0% |
| AGCCACACAGTCAACAAATG+TGG | + | tig0030801:30172-30191 | Msa1444710:CDS | 45.0% | |
| TTAGCTGCTGCTCCTAATGT+TGG | + | tig0030801:30215-30234 | Msa1444710:CDS | 45.0% | |
| TAGTGAACCTTGTAAGGGGA+TGG | + | tig0030801:30250-30269 | Msa1444710:CDS | 45.0% | |
| GGGGATGGAATTCAAATCTG+TGG | + | tig0030801:30265-30284 | Msa1444710:intron | 45.0% | |
| !!! | TTTTAGGGCTAACCATGGGA+TGG | - | tig0030801:30562-30581 | None:intergenic | 45.0% |
| !!! | CACACTTTTAGGGCTAACCA+TGG | - | tig0030801:30567-30586 | None:intergenic | 45.0% |
| AAGGAAGATGGTATACCGAC+AGG | + | tig0030801:30647-30666 | Msa1444710:intron | 45.0% | |
| AGATGGTATACCGACAGGAA+AGG | + | tig0030801:30652-30671 | Msa1444710:intron | 45.0% | |
| AATGTTCAGTGAAGGGGACT+TGG | + | tig0030801:30682-30701 | Msa1444710:intron | 45.0% | |
| ! | GGGACTTGGCTTTCTCTAAT+AGG | + | tig0030801:30696-30715 | Msa1444710:intron | 45.0% |
| AATCCAACAAACGGGGCAAA+TGG | - | tig0030801:30967-30986 | None:intergenic | 45.0% | |
| CAGCTTTCATAGCCAAATCC+TGG | - | tig0030801:31122-31141 | None:intergenic | 45.0% | |
| GCCTCTGCTTATGGCATATT+AGG | + | tig0030801:31175-31194 | Msa1444710:intron | 45.0% | |
| !! | ACGGACTGGACAACAATGAA+TGG | + | tig0030801:31331-31350 | Msa1444710:CDS | 45.0% |
| GTCTACAGGGTCAAAACTTG+AGG | + | tig0030801:31590-31609 | Msa1444710:CDS | 45.0% | |
| GCATGCTCAACAAGAAGCAA+AGG | + | tig0030801:32001-32020 | Msa1444710:CDS | 45.0% | |
| ! | CAGTGATGGAGTTTCTCCTT+TGG | + | tig0030801:32133-32152 | Msa1444710:CDS | 45.0% |
| !! | GGAGTTTCTCCTTTGGAATC+TGG | + | tig0030801:32140-32159 | Msa1444710:CDS | 45.0% |
| CAACCAAAATTGCTTGTCGG+AGG | + | tig0030801:32172-32191 | Msa1444710:CDS | 45.0% | |
| ! | CTTCCTCCGACAAGCAATTT+TGG | - | tig0030801:32178-32197 | None:intergenic | 45.0% |
| !! | CCTTTTGTTTGTGCATTGCG+TGG | - | tig0030801:32230-32249 | None:intergenic | 45.0% |
| CCACGCAATGCACAAACAAA+AGG | + | tig0030801:32227-32246 | Msa1444710:CDS | 45.0% | |
| TGTCATGAGTGTGGTGAATC+TGG | + | tig0030801:32347-32366 | Msa1444710:CDS | 45.0% | |
| !! | TTATAAAAATTAAAAATGTT+TGG | - | tig0030801:28797-28816 | None:intergenic | 5.0% |
| !! | TTAATTATAATTAAAATGAA+TGG | - | tig0030801:29475-29494 | None:intergenic | 5.0% |
| !!! | TTCATTTTAATTATAATTAA+TGG | + | tig0030801:29475-29494 | Msa1444710:intron | 5.0% |
| GAAATGTTAACCGGTGTCCC+CGG | + | tig0030801:27911-27930 | Msa1444710:intron | 50.0% | |
| AAATGTTAACCGGTGTCCCC+GGG | + | tig0030801:27912-27931 | Msa1444710:intron | 50.0% | |
| GTTGTGTTAACCGGTGCTTC+CGG | - | tig0030801:28061-28080 | None:intergenic | 50.0% | |
| ACAATGGATGTAGCAGGTGG+AGG | - | tig0030801:29646-29665 | None:intergenic | 50.0% | |
| TGCTGCTCCTAATGTTGGTG+AGG | + | tig0030801:30220-30239 | Msa1444710:CDS | 50.0% | |
| ! | ATGCCATTTGCCCCGTTTGT+TGG | + | tig0030801:30961-30980 | Msa1444710:intron | 50.0% |
| ! | CAGAGGCGATGTCTAGTTTC+TGG | - | tig0030801:31162-31181 | None:intergenic | 50.0% |
| CTAGACATCGCCTCTGCTTA+TGG | + | tig0030801:31166-31185 | Msa1444710:intron | 50.0% | |
| ! | TGATTTGAGGCGCACTCGTA+TGG | + | tig0030801:32076-32095 | Msa1444710:CDS | 50.0% |
| AATGTTAACCGGTGTCCCCG+GGG | + | tig0030801:27913-27932 | Msa1444710:intron | 55.0% | |
| TGCTTCCTTAACCAGTGCCC+CGG | - | tig0030801:27933-27952 | None:intergenic | 55.0% | |
| ! | GTGCTTCCGGACACTGGTTA+AGG | - | tig0030801:28048-28067 | None:intergenic | 55.0% |
| ! | TAACCAGTGTCCGGAAGCAC+CGG | + | tig0030801:28048-28067 | Msa1444710:intron | 55.0% |
| AGCCCCCACCCAAAAGATGA+AGG | + | tig0030801:28318-28337 | Msa1444710:intron | 55.0% | |
| GCACGTGGGAAAGTGGCTAA+TGG | - | tig0030801:28409-28428 | None:intergenic | 55.0% | |
| CTTCCTTAACCAGTGCCCCG+GGG | - | tig0030801:27931-27950 | None:intergenic | 60.0% | |
| GCTTCCTTAACCAGTGCCCC+GGG | - | tig0030801:27932-27951 | None:intergenic | 60.0% | |
| TAACCGGTGCTTCCGGACAC+TGG | - | tig0030801:28054-28073 | None:intergenic | 60.0% | |
| ! | CAGGTTGGCACGTGGGAAAG+TGG | - | tig0030801:28416-28435 | None:intergenic | 60.0% |
| ! | CTAAGGGCAGGTTGGCACGT+GGG | - | tig0030801:28423-28442 | None:intergenic | 60.0% |
| TGCCAACCTGCCCTTAGCGT+GGG | + | tig0030801:28426-28445 | Msa1444710:intron | 60.0% | |
| !! | TGTCCCCGGGGCACTGGTTA+AGG | + | tig0030801:27925-27944 | Msa1444710:intron | 65.0% |
| ! | GCTAAGGGCAGGTTGGCACG+TGG | - | tig0030801:28424-28443 | None:intergenic | 65.0% |
| GTGCCAACCTGCCCTTAGCG+TGG | + | tig0030801:28425-28444 | Msa1444710:intron | 65.0% | |
| CAACCTGCCCTTAGCGTGGG+CGG | + | tig0030801:28429-28448 | Msa1444710:intron | 65.0% | |
| GGCAACTCCGCCCACGCTAA+GGG | - | tig0030801:28439-28458 | None:intergenic | 65.0% | |
| TGGCAACTCCGCCCACGCTA+AGG | - | tig0030801:28440-28459 | None:intergenic | 65.0% | |
| AACCAGTGCCCCGGGGACAC+CGG | - | tig0030801:27924-27943 | None:intergenic | 70.0% | |
| CGCCCACGCTAAGGGCAGGT+TGG | - | tig0030801:28431-28450 | None:intergenic | 70.0% | |
| ACTCCGCCCACGCTAAGGGC+AGG | - | tig0030801:28435-28454 | None:intergenic | 70.0% | |
| AACCGGTGTCCCCGGGGCAC+TGG | + | tig0030801:27919-27938 | Msa1444710:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0030801 | gene | 27772 | 32412 | 27772 | ID=Msa1444710;Name=Msa1444710 |
| tig0030801 | mRNA | 27772 | 32412 | 27772 | ID=Msa1444710-mRNA-1;Parent=Msa1444710;Name=Msa1444710-mRNA-1;_AED=0.08;_eAED=0.13;_QI=0|0|0|0.75|0.28|0.25|8|0|462 |
| tig0030801 | exon | 27772 | 27777 | 27772 | ID=Msa1444710-mRNA-1:exon:14602;Parent=Msa1444710-mRNA-1 |
| tig0030801 | exon | 28571 | 28576 | 28571 | ID=Msa1444710-mRNA-1:exon:14603;Parent=Msa1444710-mRNA-1 |
| tig0030801 | exon | 30134 | 30283 | 30134 | ID=Msa1444710-mRNA-1:exon:14604;Parent=Msa1444710-mRNA-1 |
| tig0030801 | exon | 30293 | 30509 | 30293 | ID=Msa1444710-mRNA-1:exon:14605;Parent=Msa1444710-mRNA-1 |
| tig0030801 | exon | 30522 | 30656 | 30522 | ID=Msa1444710-mRNA-1:exon:14606;Parent=Msa1444710-mRNA-1 |
| tig0030801 | exon | 31304 | 31361 | 31304 | ID=Msa1444710-mRNA-1:exon:14607;Parent=Msa1444710-mRNA-1 |
| tig0030801 | exon | 31377 | 31622 | 31377 | ID=Msa1444710-mRNA-1:exon:14608;Parent=Msa1444710-mRNA-1 |
| tig0030801 | exon | 31842 | 32412 | 31842 | ID=Msa1444710-mRNA-1:exon:14609;Parent=Msa1444710-mRNA-1 |
| tig0030801 | CDS | 27772 | 27777 | 27772 | ID=Msa1444710-mRNA-1:cds;Parent=Msa1444710-mRNA-1 |
| tig0030801 | CDS | 28571 | 28576 | 28571 | ID=Msa1444710-mRNA-1:cds;Parent=Msa1444710-mRNA-1 |
| tig0030801 | CDS | 30134 | 30283 | 30134 | ID=Msa1444710-mRNA-1:cds;Parent=Msa1444710-mRNA-1 |
| tig0030801 | CDS | 30293 | 30509 | 30293 | ID=Msa1444710-mRNA-1:cds;Parent=Msa1444710-mRNA-1 |
| tig0030801 | CDS | 30522 | 30656 | 30522 | ID=Msa1444710-mRNA-1:cds;Parent=Msa1444710-mRNA-1 |
| tig0030801 | CDS | 31304 | 31361 | 31304 | ID=Msa1444710-mRNA-1:cds;Parent=Msa1444710-mRNA-1 |
| tig0030801 | CDS | 31377 | 31622 | 31377 | ID=Msa1444710-mRNA-1:cds;Parent=Msa1444710-mRNA-1 |
| tig0030801 | CDS | 31842 | 32412 | 31842 | ID=Msa1444710-mRNA-1:cds;Parent=Msa1444710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
