Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1208310 | XP_024634520.2 | 88.406 | 207 | 20 | 1 | 260 | 462 | 548 | 754 | 1.15e-117 | 372 |
| Msa1208310 | XP_024634520.2 | 88.793 | 116 | 6 | 2 | 165 | 275 | 381 | 494 | 3.96e-56 | 209 |
| Msa1208310 | XP_024634520.2 | 91.124 | 169 | 8 | 2 | 10 | 171 | 1 | 169 | 2.53e-95 | 314 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1208310 | sp|Q9SZL8|FRS5_ARATH | 41.121 | 107 | 58 | 1 | 174 | 275 | 429 | 535 | 3.03e-20 | 97.4 |
| Msa1208310 | sp|Q9SZL8|FRS5_ARATH | 36.486 | 148 | 72 | 5 | 36 | 166 | 59 | 201 | 1.93e-15 | 82.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa1208310 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0144390 | Msa1208310 | 0.809577 | 1.766080e-50 | -8.615850e-47 |
| Msa0344830 | Msa1208310 | 0.818809 | 1.614475e-52 | -8.615850e-47 |
| Msa1208310 | Msa1369530 | 0.805544 | 1.268270e-49 | -8.615850e-47 |
| Msa1208310 | Msa1444150 | 0.920286 | 1.551566e-87 | -8.615850e-47 |
| Msa1208310 | Msa1444710 | 0.916577 | 1.506489e-85 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1208310 | MtrunA17_Chr5g0448761 | 42.991 | 107 | 56 | 1 | 174 | 275 | 420 | 526 | 1.82e-21 | 97.8 |
| Msa1208310 | MtrunA17_Chr5g0448761 | 36.765 | 136 | 67 | 5 | 45 | 166 | 59 | 189 | 3.28e-15 | 78.2 |
| Msa1208310 | MtrunA17_Chr1g0202341 | 38.095 | 126 | 66 | 3 | 165 | 280 | 397 | 520 | 4.33e-19 | 90.1 |
| Msa1208310 | MtrunA17_Chr1g0202341 | 30.058 | 173 | 101 | 6 | 10 | 170 | 17 | 181 | 2.17e-12 | 69.3 |
| Msa1208310 | MtrunA17_Chr1g0196541 | 37.398 | 123 | 64 | 2 | 146 | 255 | 309 | 431 | 1.92e-18 | 88.2 |
| Msa1208310 | MtrunA17_Chr5g0441581 | 37.838 | 111 | 64 | 1 | 150 | 255 | 349 | 459 | 2.70e-17 | 84.7 |
| Msa1208310 | MtrunA17_Chr2g0296781 | 42.529 | 87 | 45 | 1 | 174 | 255 | 345 | 431 | 1.04e-16 | 82.8 |
| Msa1208310 | MtrunA17_Chr5g0448511 | 39.252 | 107 | 60 | 1 | 174 | 275 | 192 | 298 | 1.21e-16 | 82.4 |
| Msa1208310 | MtrunA17_Chr6g0477261 | 42.529 | 87 | 45 | 1 | 174 | 255 | 234 | 320 | 1.22e-16 | 82.8 |
| Msa1208310 | MtrunA17_Chr3g0080351 | 34.545 | 110 | 67 | 1 | 171 | 275 | 416 | 525 | 2.41e-14 | 75.5 |
| Msa1208310 | MtrunA17_Chr1g0207551 | 30.909 | 110 | 71 | 1 | 171 | 275 | 382 | 491 | 4.81e-13 | 71.6 |
| Msa1208310 | MtrunA17_Chr2g0291581 | 32.500 | 120 | 76 | 1 | 155 | 269 | 390 | 509 | 9.20e-13 | 70.5 |
| Msa1208310 | MtrunA17_Chr3g0118611 | 33.051 | 118 | 71 | 3 | 164 | 275 | 287 | 402 | 3.15e-12 | 68.9 |
| Msa1208310 | MtrunA17_Chr3g0078041 | 36.207 | 116 | 53 | 6 | 45 | 146 | 49 | 157 | 1.09e-11 | 64.7 |
| Msa1208310 | MtrunA17_Chr2g0291591 | 32.353 | 136 | 66 | 7 | 44 | 166 | 62 | 184 | 3.70e-11 | 65.5 |
| Msa1208310 | MtrunA17_Chr5g0440451 | 31.897 | 116 | 70 | 3 | 165 | 275 | 394 | 505 | 7.00e-11 | 64.7 |
| Msa1208310 | MtrunA17_Chr7g0258861 | 31.250 | 128 | 69 | 5 | 42 | 157 | 6 | 126 | 8.02e-11 | 63.2 |
| Msa1208310 | MtrunA17_Chr1g0198761 | 26.012 | 173 | 120 | 2 | 112 | 284 | 362 | 526 | 8.51e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1208310 | AT4G38180.1 | 41.121 | 107 | 58 | 1 | 174 | 275 | 429 | 535 | 3.08e-21 | 97.4 |
| Msa1208310 | AT4G38180.1 | 36.486 | 148 | 72 | 5 | 36 | 166 | 59 | 201 | 1.96e-16 | 82.4 |
| Msa1208310 | AT4G15090.1 | 36.111 | 108 | 64 | 1 | 171 | 273 | 402 | 509 | 1.43e-17 | 86.3 |
| Msa1208310 | AT4G15090.5 | 36.111 | 108 | 64 | 1 | 171 | 273 | 402 | 509 | 1.43e-17 | 86.3 |
| Msa1208310 | AT4G15090.3 | 36.111 | 108 | 64 | 1 | 171 | 273 | 402 | 509 | 1.43e-17 | 86.3 |
| Msa1208310 | AT4G15090.2 | 36.111 | 108 | 64 | 1 | 171 | 273 | 402 | 509 | 1.43e-17 | 86.3 |
| Msa1208310 | AT4G15090.4 | 36.111 | 108 | 64 | 1 | 171 | 273 | 402 | 509 | 1.43e-17 | 86.3 |
| Msa1208310 | AT4G38170.1 | 33.645 | 107 | 66 | 1 | 174 | 275 | 194 | 300 | 6.09e-16 | 80.5 |
| Msa1208310 | AT3G22170.2 | 32.174 | 115 | 69 | 2 | 170 | 275 | 406 | 520 | 5.24e-14 | 75.1 |
| Msa1208310 | AT3G22170.1 | 32.174 | 115 | 69 | 2 | 170 | 275 | 406 | 520 | 5.24e-14 | 75.1 |
| Msa1208310 | AT2G27110.3 | 32.278 | 158 | 93 | 6 | 165 | 317 | 224 | 372 | 3.28e-13 | 72.4 |
| Msa1208310 | AT2G27110.2 | 32.278 | 158 | 93 | 6 | 165 | 317 | 369 | 517 | 3.81e-13 | 72.4 |
| Msa1208310 | AT2G27110.1 | 32.278 | 158 | 93 | 6 | 165 | 317 | 369 | 517 | 3.81e-13 | 72.4 |
| Msa1208310 | AT5G18960.2 | 35.043 | 117 | 66 | 3 | 171 | 280 | 523 | 636 | 2.40e-11 | 66.6 |
| Msa1208310 | AT5G18960.1 | 35.043 | 117 | 66 | 3 | 171 | 280 | 523 | 636 | 2.40e-11 | 66.6 |
| Msa1208310 | AT1G76320.1 | 25.967 | 181 | 112 | 4 | 171 | 346 | 339 | 502 | 7.80e-11 | 65.1 |
| Msa1208310 | AT1G76320.4 | 25.967 | 181 | 112 | 4 | 171 | 346 | 339 | 502 | 7.80e-11 | 65.1 |
| Msa1208310 | AT1G76320.2 | 25.967 | 181 | 112 | 4 | 171 | 346 | 339 | 502 | 7.99e-11 | 64.7 |
Find 56 sgRNAs with CRISPR-Local
Find 276 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCCTCCGACAAGCAATTT+TGG | 0.188112 | 8_1:+66333502 | None:intergenic |
| TTTACAATTCATTTGCAAAA+AGG | 0.228560 | 8_1:-66335374 | Msa1208310:CDS |
| TGCATCCTTCTTAATATCTT+TGG | 0.239826 | 8_1:+66333696 | None:intergenic |
| AGCAAAGGTATTAGTTGATT+TGG | 0.254141 | 8_1:-66333661 | Msa1208310:CDS |
| ACAGGTGCATTGGTCAATTA+TGG | 0.275145 | 8_1:-66335547 | Msa1208310:intron |
| GAGGTACATTAGAAGGAAAT+TGG | 0.278387 | 8_1:-66335170 | Msa1208310:intron |
| GGAGTTTCTCCTTTGGAATC+TGG | 0.287253 | 8_1:-66333537 | Msa1208310:CDS |
| GGATTTCTAATAGTCAATTC+TGG | 0.312090 | 8_1:+66333471 | None:intergenic |
| CATACAAAGACAGCTCTCTT+TGG | 0.340587 | 8_1:+66335318 | None:intergenic |
| TATATAAAATTAGAGAATCT+TGG | 0.344745 | 8_1:-66334313 | Msa1208310:intron |
| TTTAATTCCTCACCAACATT+AGG | 0.347135 | 8_1:+66335450 | None:intergenic |
| ATTAAATAGTGAACCTTGTA+AGG | 0.348615 | 8_1:-66335433 | Msa1208310:CDS |
| CAGTGATGGAGTTTCTCCTT+TGG | 0.356600 | 8_1:-66333544 | Msa1208310:CDS |
| TAGTTTGATTTGTGTCATCT+TGG | 0.378031 | 8_1:+66335247 | None:intergenic |
| TGCAACGCTGCAAAATAAAA+TGG | 0.387426 | 8_1:+66333787 | None:intergenic |
| AAACAGCTTCTATTATAAAC+TGG | 0.392497 | 8_1:+66334287 | None:intergenic |
| GTCCGTACTCAATCATTAAT+CGG | 0.426232 | 8_1:+66334363 | None:intergenic |
| AAGTGTTCTACTTCTCGAAC+TGG | 0.426697 | 8_1:-66335219 | Msa1208310:CDS |
| CCACGCAATGCACAAACAAA+AGG | 0.435072 | 8_1:-66333450 | Msa1208310:CDS |
| GCCACACTTGTTGTTAAAAG+AGG | 0.437725 | 8_1:-66335189 | Msa1208310:intron |
| GACAACAATGAATGGCTTCA+AGG | 0.439948 | 8_1:-66334338 | Msa1208310:CDS |
| AATTCATTATATCTGATTTG+AGG | 0.445916 | 8_1:-66333614 | Msa1208310:CDS |
| CGCTGCAAAATAAAATGGTC+AGG | 0.446582 | 8_1:+66333792 | None:intergenic |
| TGTCATGAGTGTGGTGAATC+TGG | 0.451337 | 8_1:-66333330 | Msa1208310:CDS |
| ATTTGTGTTGAAATTTGAAA+AGG | 0.454017 | 8_1:-66334177 | Msa1208310:CDS |
| TTGAATTCCATCCCCTTACA+AGG | 0.484462 | 8_1:+66335420 | None:intergenic |
| TTAGCTGCTGCTCCTAATGT+TGG | 0.490364 | 8_1:-66335462 | Msa1208310:CDS |
| AAAGAGAGGATTATGAAAGT+AGG | 0.500092 | 8_1:-66334127 | Msa1208310:CDS |
| ATTTGATTTCTTCATTGCAA+TGG | 0.501662 | 8_1:+66333575 | None:intergenic |
| CAAAATTGTAGATTCAAAAG+TGG | 0.511466 | 8_1:-66333399 | Msa1208310:CDS |
| GTCTTTGTATGTTGTAATGA+AGG | 0.517879 | 8_1:-66335306 | Msa1208310:CDS |
| TGATTTGAGGCGCACTCGTA+TGG | 0.520232 | 8_1:-66333601 | Msa1208310:CDS |
| TAGTGAACCTTGTAAGGGGA+TGG | 0.531310 | 8_1:-66335427 | Msa1208310:CDS |
| CACGCAATGCACAAACAAAA+GGG | 0.538817 | 8_1:-66333449 | Msa1208310:CDS |
| TGTCAACCAAAATTGCTTGT+CGG | 0.544243 | 8_1:-66333508 | Msa1208310:CDS |
| CGGTGTCATAAAAGCATGAA+TGG | 0.550442 | 8_1:-66335081 | Msa1208310:CDS |
| ACAAAAGGGAGAAAGAAGAA+TGG | 0.552574 | 8_1:-66333435 | Msa1208310:CDS |
| TCAAATTTAGCTATCAGTGA+TGG | 0.553213 | 8_1:-66333558 | Msa1208310:CDS |
| TTAAATAGTGAACCTTGTAA+GGG | 0.571595 | 8_1:-66335432 | Msa1208310:CDS |
| GCACGCCAAAGATATTAAGA+AGG | 0.572798 | 8_1:-66333701 | Msa1208310:CDS |
| ACAACAATGAATGGCTTCAA+GGG | 0.573168 | 8_1:-66334337 | Msa1208310:intron |
| ACGGACTGGACAACAATGAA+TGG | 0.575271 | 8_1:-66334346 | Msa1208310:CDS |
| GTCTACAGGGTCAAAACTTG+AGG | 0.581238 | 8_1:-66334087 | Msa1208310:CDS |
| TGTGTTGAAATTTGAAAAGG+CGG | 0.586171 | 8_1:-66334174 | Msa1208310:CDS |
| AGCCGATTAATGATTGAGTA+CGG | 0.595364 | 8_1:-66334365 | Msa1208310:CDS |
| TGCTGCTCCTAATGTTGGTG+AGG | 0.601546 | 8_1:-66335457 | Msa1208310:CDS |
| GCATGCTCAACAAGAAGCAA+AGG | 0.605686 | 8_1:-66333676 | Msa1208310:CDS |
| TTCCACATTTGTTGACTGTG+TGG | 0.606600 | 8_1:+66335503 | None:intergenic |
| ATTAATGATTGAGTACGGAC+TGG | 0.607432 | 8_1:-66334360 | Msa1208310:CDS |
| GTGCATTGGTCAATTATGGA+TGG | 0.620199 | 8_1:-66335543 | Msa1208310:CDS |
| AGCCACACAGTCAACAAATG+TGG | 0.622019 | 8_1:-66335505 | Msa1208310:CDS |
| TAAATAGTGAACCTTGTAAG+GGG | 0.625905 | 8_1:-66335431 | Msa1208310:CDS |
| CAACCAAAATTGCTTGTCGG+AGG | 0.633822 | 8_1:-66333505 | Msa1208310:CDS |
| GAATGATCATAACCATCCCA+TGG | 0.640152 | 8_1:-66335130 | Msa1208310:CDS |
| CTAAAAGTGTGTCTTATATG+CGG | 0.670716 | 8_1:-66335101 | Msa1208310:CDS |
| AGAAAAGCATGTCATGAGTG+TGG | 0.709074 | 8_1:-66333339 | Msa1208310:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTAAAACTTTCTTTTTT+TGG | - | chr8_1:66333534-66333553 | Msa1208310:CDS | 10.0% |
| !!! | TTTAATTTTAATTTTACGTA+CGG | - | chr8_1:66334146-66334165 | Msa1208310:CDS | 10.0% |
| !!! | ATGAAATATGTTTTATTTTT+TGG | - | chr8_1:66334573-66334592 | Msa1208310:intron | 10.0% |
| !!! | TGAAATATGTTTTATTTTTT+GGG | - | chr8_1:66334574-66334593 | Msa1208310:intron | 10.0% |
| !! | TATGATCTATATTATTATTA+TGG | - | chr8_1:66334766-66334785 | Msa1208310:intron | 10.0% |
| !!! | TATGTCATAATTATAATTTT+TGG | + | chr8_1:66334956-66334975 | None:intergenic | 10.0% |
| !! | TTAATTCAATTTAATTGTTA+AGG | - | chr8_1:66335166-66335185 | Msa1208310:intron | 10.0% |
| !!! | CAATTATTTTTATAAAAAAC+AGG | - | chr8_1:66335774-66335793 | Msa1208310:intron | 10.0% |
| !! | CATTTAATAAATGATGTATT+TGG | + | chr8_1:66333782-66333801 | None:intergenic | 15.0% |
| !! | ATGATATTTGTACAATTTAT+TGG | + | chr8_1:66333903-66333922 | None:intergenic | 15.0% |
| !!! | TTAATTTTAATTTTACGTAC+GGG | - | chr8_1:66334147-66334166 | Msa1208310:CDS | 15.0% |
| !! | AAATATGTCTTTAATTAAGT+AGG | - | chr8_1:66334600-66334619 | Msa1208310:intron | 15.0% |
| !! | CATTCAATTAATAATATATG+TGG | + | chr8_1:66334793-66334812 | None:intergenic | 15.0% |
| !!! | TAAGCAAATTTTGAATTTTT+AGG | + | chr8_1:66334818-66334837 | None:intergenic | 15.0% |
| !! | AAAATCAAAATAAGTAGTTA+TGG | + | chr8_1:66334926-66334945 | None:intergenic | 15.0% |
| !! | GTAAATTAGAAAGAAAAAAA+TGG | + | chr8_1:66335533-66335552 | None:intergenic | 15.0% |
| !!! | CATTATCAATCAATTTTATT+TGG | - | chr8_1:66336656-66336675 | Msa1208310:intron | 15.0% |
| !! | TATATAAAATTAGAGAATCT+TGG | - | chr8_1:66337026-66337045 | Msa1208310:intron | 15.0% |
| !! | TACTAATTAGAGAAATGATA+TGG | - | chr8_1:66333403-66333422 | Msa1208310:CDS | 20.0% |
| !! | ACTAATTAGAGAAATGATAT+GGG | - | chr8_1:66333404-66333423 | Msa1208310:CDS | 20.0% |
| !!! | TAAGCAAATTTTGACTTTTA+AGG | - | chr8_1:66333718-66333737 | Msa1208310:CDS | 20.0% |
| !!! | CATTTACTTCATTTACTTTT+GGG | + | chr8_1:66333948-66333967 | None:intergenic | 20.0% |
| !!! | TCATTTACTTCATTTACTTT+TGG | + | chr8_1:66333949-66333968 | None:intergenic | 20.0% |
| !! | AAATGAAGTAAATGAGTAAA+AGG | - | chr8_1:66333954-66333973 | Msa1208310:intron | 20.0% |
| !!! | TAAAAATTTAAGGTCCATTT+TGG | + | chr8_1:66334634-66334653 | None:intergenic | 20.0% |
| !!! | CCTTAAATTTTTAAACATGT+CGG | - | chr8_1:66334641-66334660 | Msa1208310:intron | 20.0% |
| !!! | AATTTGCTTATAATTGACAA+CGG | + | chr8_1:66334828-66334847 | None:intergenic | 20.0% |
| !! | ATTCAATTTAATTGTTAAGG+TGG | - | chr8_1:66335169-66335188 | Msa1208310:intron | 20.0% |
| !! | TTCAATTTAATTGTTAAGGT+GGG | - | chr8_1:66335170-66335189 | Msa1208310:intron | 20.0% |
| !! | TGCCAATTTCTTATATAATT+AGG | - | chr8_1:66335403-66335422 | Msa1208310:intron | 20.0% |
| !! | GCCAATTTCTTATATAATTA+GGG | - | chr8_1:66335404-66335423 | Msa1208310:intron | 20.0% |
| !! | ACCCTAATTATATAAGAAAT+TGG | + | chr8_1:66335408-66335427 | None:intergenic | 20.0% |
| !! | ATCAACAAAAAAGAAAAGAA+AGG | + | chr8_1:66335456-66335475 | None:intergenic | 20.0% |
| !!! | TTTTTTTATTGTTACGTTCA+TGG | - | chr8_1:66335607-66335626 | Msa1208310:intron | 20.0% |
| !!! | TAATTGGCTTTTTTTTTGTT+TGG | - | chr8_1:66335651-66335670 | Msa1208310:intron | 20.0% |
| !! | TTTACAATTCATTTGCAAAA+AGG | - | chr8_1:66335965-66335984 | Msa1208310:intron | 20.0% |
| !! | ATTTGTGTTGAAATTTGAAA+AGG | - | chr8_1:66337162-66337181 | Msa1208310:intron | 20.0% |
| !!! | ATTTATTCGAGAAACATTTT+TGG | - | chr8_1:66337289-66337308 | Msa1208310:intron | 20.0% |
| !!! | ATGTCAATTATATGAGTTTT+TGG | - | chr8_1:66337468-66337487 | Msa1208310:intron | 20.0% |
| !!! | TGTCAATTATATGAGTTTTT+GGG | - | chr8_1:66337469-66337488 | Msa1208310:intron | 20.0% |
| !!! | AATTCATTATATCTGATTTG+AGG | - | chr8_1:66337725-66337744 | Msa1208310:intron | 20.0% |
| ! | CATATATAGTAATACTGCAT+TGG | - | chr8_1:66333466-66333485 | Msa1208310:CDS | 25.0% |
| ! | TGGTTGTACAAATATCAATT+GGG | + | chr8_1:66333598-66333617 | None:intergenic | 25.0% |
| ! | ATGGTTGTACAAATATCAAT+TGG | + | chr8_1:66333599-66333618 | None:intergenic | 25.0% |
| ! | GTCAAAAAGTTGTTAGAAAA+TGG | + | chr8_1:66333618-66333637 | None:intergenic | 25.0% |
| ! | CATTCAATAAATGATGTATG+TGG | - | chr8_1:66333743-66333762 | Msa1208310:CDS | 25.0% |
| !! | ATAATTTGATCGTAGCTTTT+TGG | + | chr8_1:66334190-66334209 | None:intergenic | 25.0% |
| !! | TAATTTGTATGTCAAGTCAT+TGG | + | chr8_1:66334494-66334513 | None:intergenic | 25.0% |
| ! | CCGACATGTTTAAAAATTTA+AGG | + | chr8_1:66334644-66334663 | None:intergenic | 25.0% |
| !! | ATTTTTAAACATGTCGGATT+TGG | - | chr8_1:66334647-66334666 | Msa1208310:intron | 25.0% |
| !!! | GATATGCTTAATTTTTTCCA+AGG | + | chr8_1:66334896-66334915 | None:intergenic | 25.0% |
| !!! | TTATTTTGTACTTGCTTAGA+TGG | - | chr8_1:66334979-66334998 | Msa1208310:intron | 25.0% |
| ! | TAAAATGAATGGTCATGATT+TGG | + | chr8_1:66335126-66335145 | None:intergenic | 25.0% |
| ! | TCAATTTAATTGTTAAGGTG+GGG | - | chr8_1:66335171-66335190 | Msa1208310:intron | 25.0% |
| ! | AATTGTGAATTGTTGTGTAT+TGG | + | chr8_1:66335233-66335252 | None:intergenic | 25.0% |
| ! | TACCTCTATATTGAAAAGAA+GGG | + | chr8_1:66335341-66335360 | None:intergenic | 25.0% |
| ! | TTACCTCTATATTGAAAAGA+AGG | + | chr8_1:66335342-66335361 | None:intergenic | 25.0% |
| ! | AAAAAATGGCCAAATTAGAA+AGG | + | chr8_1:66335519-66335538 | None:intergenic | 25.0% |
| ! | AGTAATCCTTCAACTATAAT+TGG | - | chr8_1:66335635-66335654 | Msa1208310:intron | 25.0% |
| ! | AAAAAGCCAATTATAGTTGA+AGG | + | chr8_1:66335644-66335663 | None:intergenic | 25.0% |
| ! | TTTATAAAAAACAGGTGCAT+TGG | - | chr8_1:66335782-66335801 | Msa1208310:intron | 25.0% |
| ! | ATTAAATAGTGAACCTTGTA+AGG | - | chr8_1:66335906-66335925 | Msa1208310:intron | 25.0% |
| ! | TTAAATAGTGAACCTTGTAA+GGG | - | chr8_1:66335907-66335926 | Msa1208310:intron | 25.0% |
| ! | AATTCATTTGCAAAAAGGAT+GGG | - | chr8_1:66335970-66335989 | Msa1208310:intron | 25.0% |
| !!! | AAGTCTTGTTGAACATTTTA+AGG | - | chr8_1:66336290-66336309 | Msa1208310:intron | 25.0% |
| !!! | TCGGATGATAAACTTTTTTT+GGG | - | chr8_1:66336518-66336537 | Msa1208310:intron | 25.0% |
| ! | ATATTACATCTCCAAATTGT+TGG | + | chr8_1:66336569-66336588 | None:intergenic | 25.0% |
| !!! | ATACTTGTTAGTCTTATATG+TGG | + | chr8_1:66336601-66336620 | None:intergenic | 25.0% |
| ! | TGATTATTCAATCCAACAAA+CGG | + | chr8_1:66336638-66336657 | None:intergenic | 25.0% |
| !!! | GTTGTTTGAAACTTTTCTTA+AGG | - | chr8_1:66336721-66336740 | Msa1208310:intron | 25.0% |
| ! | TCTTCAAAACTTTCTATACT+TGG | + | chr8_1:66336947-66336966 | None:intergenic | 25.0% |
| ! | AAACAGCTTCTATTATAAAC+TGG | + | chr8_1:66337055-66337074 | None:intergenic | 25.0% |
| ! | GTAAATTTCAAGATGAGATT+GGG | - | chr8_1:66337311-66337330 | Msa1208310:intron | 25.0% |
| ! | AAAAAGAAGATTAGCAAAGA+TGG | - | chr8_1:66337352-66337371 | Msa1208310:intron | 25.0% |
| !! | GTCAATTATATGAGTTTTTG+GGG | - | chr8_1:66337470-66337489 | Msa1208310:intron | 25.0% |
| !! | ATTTGATTTCTTCATTGCAA+TGG | + | chr8_1:66337767-66337786 | None:intergenic | 25.0% |
| ! | CAAAATTGTAGATTCAAAAG+TGG | - | chr8_1:66337940-66337959 | Msa1208310:intron | 25.0% |
| ATGATATGGGAAATGTTAAC+CGG | - | chr8_1:66333417-66333436 | Msa1208310:CDS | 30.0% | |
| TACAACTTTCATGACAACTT+TGG | + | chr8_1:66333880-66333899 | None:intergenic | 30.0% | |
| !! | TTACTTCATTTACTTTTGGG+TGG | + | chr8_1:66333945-66333964 | None:intergenic | 30.0% |
| ! | GATCATTTCCTTCATCTTTT+GGG | + | chr8_1:66333990-66334009 | None:intergenic | 30.0% |
| ! | AGATCATTTCCTTCATCTTT+TGG | + | chr8_1:66333991-66334010 | None:intergenic | 30.0% |
| GCTAATGGCCTAATAATATA+GGG | + | chr8_1:66334055-66334074 | None:intergenic | 30.0% | |
| ATCCTTAAACAACATCATCA+AGG | - | chr8_1:66334370-66334389 | Msa1208310:CDS | 30.0% | |
| TTGCTTATAATTGACAACGA+AGG | - | chr8_1:66334831-66334850 | Msa1208310:intron | 30.0% | |
| ACCTCATTAAAAGTTTAGAG+TGG | - | chr8_1:66335062-66335081 | Msa1208310:CDS | 30.0% | |
| ! | CCTCATTAAAAGTTTAGAGT+GGG | - | chr8_1:66335063-66335082 | Msa1208310:CDS | 30.0% |
| ! | CTCATTAAAAGTTTAGAGTG+GGG | - | chr8_1:66335064-66335083 | Msa1208310:CDS | 30.0% |
| TAAGTGTTTAGACTTACTCT+TGG | + | chr8_1:66335101-66335120 | None:intergenic | 30.0% | |
| AAGATAAATGTGTGTAGATG+TGG | + | chr8_1:66335210-66335229 | None:intergenic | 30.0% | |
| AAGAAAGGAATCAGAAAAAG+AGG | + | chr8_1:66335441-66335460 | None:intergenic | 30.0% | |
| AAATCGATGCCTTTCTAATT+TGG | - | chr8_1:66335507-66335526 | Msa1208310:CDS | 30.0% | |
| TATAGTGCTATACTTATCGT+GGG | - | chr8_1:66335573-66335592 | Msa1208310:intron | 30.0% | |
| TTTAATTCCTCACCAACATT+AGG | + | chr8_1:66335892-66335911 | None:intergenic | 30.0% | |
| TAAATAGTGAACCTTGTAAG+GGG | - | chr8_1:66335908-66335927 | Msa1208310:intron | 30.0% | |
| CAATTCATTTGCAAAAAGGA+TGG | - | chr8_1:66335969-66335988 | Msa1208310:intron | 30.0% | |
| GTCTTTGTATGTTGTAATGA+AGG | - | chr8_1:66336033-66336052 | Msa1208310:intron | 30.0% | |
| !! | TAGTTTGATTTGTGTCATCT+TGG | + | chr8_1:66336095-66336114 | None:intergenic | 30.0% |
| ! | GTTAAAAGAGGTACATTAGA+AGG | - | chr8_1:66336162-66336181 | Msa1208310:intron | 30.0% |
| ! | GCATATAAGACACACTTTTA+GGG | + | chr8_1:66336239-66336258 | None:intergenic | 30.0% |
| ! | CTAAAAGTGTGTCTTATATG+CGG | - | chr8_1:66336238-66336257 | Msa1208310:intron | 30.0% |
| !! | GTTGAACATTTTAAGGAAGA+TGG | - | chr8_1:66336297-66336316 | Msa1208310:intron | 30.0% |
| CAATTATTGCAAACAGAAAC+AGG | - | chr8_1:66336449-66336468 | Msa1208310:intron | 30.0% | |
| !!! | CTCGGATGATAAACTTTTTT+TGG | - | chr8_1:66336517-66336536 | Msa1208310:intron | 30.0% |
| !! | AGATTAGCTTACCAACAATT+TGG | - | chr8_1:66336555-66336574 | Msa1208310:intron | 30.0% |
| ATTATTCAATCCAACAAACG+GGG | + | chr8_1:66336636-66336655 | None:intergenic | 30.0% | |
| GATTATTCAATCCAACAAAC+GGG | + | chr8_1:66336637-66336656 | None:intergenic | 30.0% | |
| ! | TGAAACTTTTCTTAAGGCAA+TGG | - | chr8_1:66336727-66336746 | Msa1208310:intron | 30.0% |
| !!! | TAGAAAGTTTTGAAGAAGAC+TGG | - | chr8_1:66336951-66336970 | Msa1208310:intron | 30.0% |
| !!! | AATAGAAGCTGTTTTTTTGC+TGG | - | chr8_1:66337061-66337080 | Msa1208310:intron | 30.0% |
| !!! | ATAGAAGCTGTTTTTTTGCT+GGG | - | chr8_1:66337062-66337081 | Msa1208310:intron | 30.0% |
| TGTGTTGAAATTTGAAAAGG+CGG | - | chr8_1:66337165-66337184 | Msa1208310:intron | 30.0% | |
| !!! | CTCTTTTTTCTACTTCTAAG+CGG | + | chr8_1:66337198-66337217 | None:intergenic | 30.0% |
| CTTAGAAGTAGAAAAAAGAG+AGG | - | chr8_1:66337198-66337217 | Msa1208310:intron | 30.0% | |
| AAAGAGAGGATTATGAAAGT+AGG | - | chr8_1:66337212-66337231 | Msa1208310:intron | 30.0% | |
| AAAAAACGCATATTGTCTAC+AGG | - | chr8_1:66337238-66337257 | Msa1208310:intron | 30.0% | |
| AAAAACGCATATTGTCTACA+GGG | - | chr8_1:66337239-66337258 | Msa1208310:intron | 30.0% | |
| GGTAAATTTCAAGATGAGAT+TGG | - | chr8_1:66337310-66337329 | Msa1208310:intron | 30.0% | |
| GAAACTTGATAGACATAGTT+AGG | + | chr8_1:66337379-66337398 | None:intergenic | 30.0% | |
| GTTTCTCGTTGATGTAAATT+TGG | - | chr8_1:66337423-66337442 | Msa1208310:intron | 30.0% | |
| !!! | CTCGTAATTTTTCAAGCAAA+AGG | - | chr8_1:66337511-66337530 | Msa1208310:intron | 30.0% |
| TGCATCCTTCTTAATATCTT+TGG | + | chr8_1:66337646-66337665 | None:intergenic | 30.0% | |
| !! | AGCAAAGGTATTAGTTGATT+TGG | - | chr8_1:66337678-66337697 | Msa1208310:intron | 30.0% |
| TCAAATTTAGCTATCAGTGA+TGG | - | chr8_1:66337781-66337800 | Msa1208310:intron | 30.0% | |
| !!! | AGCAATTTTGGTTGACATTT+TGG | + | chr8_1:66337828-66337847 | None:intergenic | 30.0% |
| GGATTTCTAATAGTCAATTC+TGG | + | chr8_1:66337871-66337890 | None:intergenic | 30.0% | |
| ! | ATCAATTGGGTTGTGTTAAC+CGG | + | chr8_1:66333585-66333604 | None:intergenic | 35.0% |
| AGGGAGTAGAGAGAAAAAAA+AGG | + | chr8_1:66333685-66333704 | None:intergenic | 35.0% | |
| TGCTTATAATAGTGACCAGA+GGG | + | chr8_1:66333821-66333840 | None:intergenic | 35.0% | |
| TTGCTTATAATAGTGACCAG+AGG | + | chr8_1:66333820-66333839 | None:intergenic | 35.0% | |
| TTGCTTATAATAGTGACCAG+AGG | - | chr8_1:66333820-66333839 | Msa1208310:CDS | 35.0% | |
| TGCTTATAATAGTGACCAGA+GGG | - | chr8_1:66333821-66333840 | Msa1208310:CDS | 35.0% | |
| GTCAAAAATAATACTCCCTC+TGG | + | chr8_1:66333839-66333858 | None:intergenic | 35.0% | |
| !! | ATTTCCTTCATCTTTTGGGT+GGG | + | chr8_1:66333986-66334005 | None:intergenic | 35.0% |
| ATGGCCTAATAATATAGGGA+GGG | + | chr8_1:66334051-66334070 | None:intergenic | 35.0% | |
| AATGGCCTAATAATATAGGG+AGG | + | chr8_1:66334052-66334071 | None:intergenic | 35.0% | |
| GGCTAATGGCCTAATAATAT+AGG | + | chr8_1:66334056-66334075 | None:intergenic | 35.0% | |
| CCACTTTCTAAACAAGCATT+TGG | + | chr8_1:66334121-66334140 | None:intergenic | 35.0% | |
| CCAAATGCTTGTTTAGAAAG+TGG | - | chr8_1:66334118-66334137 | Msa1208310:CDS | 35.0% | |
| !! | TTGATCGTAGCTTTTTGGTA+GGG | + | chr8_1:66334185-66334204 | None:intergenic | 35.0% |
| !! | TTTGATCGTAGCTTTTTGGT+AGG | + | chr8_1:66334186-66334205 | None:intergenic | 35.0% |
| !! | TGCCTTGATGATGTTGTTTA+AGG | + | chr8_1:66334375-66334394 | None:intergenic | 35.0% |
| TAATTGACAACGGAAAGAGT+AGG | + | chr8_1:66334703-66334722 | None:intergenic | 35.0% | |
| AGTATCTGCACCATATTTAC+CGG | - | chr8_1:66334855-66334874 | Msa1208310:intron | 35.0% | |
| ! | CCCACTCTAAACTTTTAATG+AGG | + | chr8_1:66335066-66335085 | None:intergenic | 35.0% |
| ! | TGCCCTTCTTTTCAATATAG+AGG | - | chr8_1:66335336-66335355 | Msa1208310:CDS | 35.0% |
| GTATAGTGCTATACTTATCG+TGG | - | chr8_1:66335572-66335591 | Msa1208310:intron | 35.0% | |
| ! | TGTACAAGAAGTACAAATGG+AGG | + | chr8_1:66335677-66335696 | None:intergenic | 35.0% |
| ! | CCATGTACAAGAAGTACAAA+TGG | + | chr8_1:66335680-66335699 | None:intergenic | 35.0% |
| CCATTTGTACTTCTTGTACA+TGG | - | chr8_1:66335677-66335696 | Msa1208310:intron | 35.0% | |
| GGAATTCAAATCTGTGGAAA+AGG | - | chr8_1:66335933-66335952 | Msa1208310:intron | 35.0% | |
| !! | TTTGCAAAAAGGATGGGTTT+TGG | - | chr8_1:66335976-66335995 | Msa1208310:intron | 35.0% |
| ! | ACCTCTTTTAACAACAAGTG+TGG | + | chr8_1:66336154-66336173 | None:intergenic | 35.0% |
| GAGGTACATTAGAAGGAAAT+TGG | - | chr8_1:66336169-66336188 | Msa1208310:intron | 35.0% | |
| ! | CGCATATAAGACACACTTTT+AGG | + | chr8_1:66336240-66336259 | None:intergenic | 35.0% |
| TTGCTACAATGTTCAGTGAA+GGG | - | chr8_1:66336337-66336356 | Msa1208310:intron | 35.0% | |
| CTTTCTCTAATAGGGATTGT+TGG | - | chr8_1:66336367-66336386 | Msa1208310:intron | 35.0% | |
| CGAAGAAAGAATTTAGACGT+TGG | - | chr8_1:66336408-66336427 | Msa1208310:intron | 35.0% | |
| TCCAATGTGATGAAGATTCT+CGG | - | chr8_1:66336499-66336518 | Msa1208310:intron | 35.0% | |
| AGTCAGAACGCTCATTTATA+TGG | - | chr8_1:66336699-66336718 | Msa1208310:intron | 35.0% | |
| ! | ACTTTTCTTAAGGCAATGGA+TGG | - | chr8_1:66336731-66336750 | Msa1208310:intron | 35.0% |
| TGGTCAGTTATGACAGATTT+GGG | + | chr8_1:66336764-66336783 | None:intergenic | 35.0% | |
| TTTCAATTCTCGCTTGAAAG+TGG | + | chr8_1:66336906-66336925 | None:intergenic | 35.0% | |
| AGCCGATTAATGATTGAGTA+CGG | - | chr8_1:66336974-66336993 | Msa1208310:intron | 35.0% | |
| GTCCGTACTCAATCATTAAT+CGG | + | chr8_1:66336979-66336998 | None:intergenic | 35.0% | |
| ATTAATGATTGAGTACGGAC+TGG | - | chr8_1:66336979-66336998 | Msa1208310:intron | 35.0% | |
| ACAACAATGAATGGCTTCAA+GGG | - | chr8_1:66337002-66337021 | Msa1208310:intron | 35.0% | |
| GAAACACAGATTGCAAAATG+TGG | - | chr8_1:66337445-66337464 | Msa1208310:intron | 35.0% | |
| TGCAACGCTGCAAAATAAAA+TGG | + | chr8_1:66337555-66337574 | None:intergenic | 35.0% | |
| ! | GATACGACGAGTAATTTTGA+AGG | - | chr8_1:66337607-66337626 | Msa1208310:intron | 35.0% |
| TGTCAACCAAAATTGCTTGT+CGG | - | chr8_1:66337831-66337850 | Msa1208310:intron | 35.0% | |
| ACAAAAGGGAGAAAGAAGAA+TGG | - | chr8_1:66337904-66337923 | Msa1208310:intron | 35.0% | |
| !!! | TTTTTTCTCTCTACTCCCTC+TGG | - | chr8_1:66333686-66333705 | Msa1208310:CDS | 40.0% |
| !! | TTTCCTTCATCTTTTGGGTG+GGG | + | chr8_1:66333985-66334004 | None:intergenic | 40.0% |
| ! | CATTTCCTTCATCTTTTGGG+TGG | + | chr8_1:66333987-66334006 | None:intergenic | 40.0% |
| TGGCCTAATAATATAGGGAG+GGG | + | chr8_1:66334050-66334069 | None:intergenic | 40.0% | |
| AGTAGGCTAGTATGCCAAAA+TGG | - | chr8_1:66334617-66334636 | Msa1208310:intron | 40.0% | |
| AAGGTAATTGCAGCACATTC+CGG | + | chr8_1:66334877-66334896 | None:intergenic | 40.0% | |
| AGACTTACTCTTGGAGTCAA+TGG | + | chr8_1:66335092-66335111 | None:intergenic | 40.0% | |
| TTAACAATGGATGTAGCAGG+TGG | + | chr8_1:66335311-66335330 | None:intergenic | 40.0% | |
| TGCTTAACAATGGATGTAGC+AGG | + | chr8_1:66335314-66335333 | None:intergenic | 40.0% | |
| TTCTTGTACATGGTGTATCG+TGG | - | chr8_1:66335687-66335706 | Msa1208310:intron | 40.0% | |
| ! | ACAGGTGCATTGGTCAATTA+TGG | - | chr8_1:66335792-66335811 | Msa1208310:intron | 40.0% |
| ! | GTGCATTGGTCAATTATGGA+TGG | - | chr8_1:66335796-66335815 | Msa1208310:intron | 40.0% |
| ! | TTCCACATTTGTTGACTGTG+TGG | + | chr8_1:66335839-66335858 | None:intergenic | 40.0% |
| TTGAATTCCATCCCCTTACA+AGG | + | chr8_1:66335922-66335941 | None:intergenic | 40.0% | |
| CATACAAAGACAGCTCTCTT+TGG | + | chr8_1:66336024-66336043 | None:intergenic | 40.0% | |
| AAGTGTTCTACTTCTCGAAC+TGG | - | chr8_1:66336120-66336139 | Msa1208310:intron | 40.0% | |
| !! | GCCACACTTGTTGTTAAAAG+AGG | - | chr8_1:66336150-66336169 | Msa1208310:intron | 40.0% |
| GAATGATCATAACCATCCCA+TGG | - | chr8_1:66336209-66336228 | Msa1208310:intron | 40.0% | |
| !!! | ACACTTTTAGGGCTAACCAT+GGG | + | chr8_1:66336228-66336247 | None:intergenic | 40.0% |
| !! | CGGTGTCATAAAAGCATGAA+TGG | - | chr8_1:66336258-66336277 | Msa1208310:intron | 40.0% |
| ATTGTAGCAACCTTTCCTGT+CGG | + | chr8_1:66336327-66336346 | None:intergenic | 40.0% | |
| GTTGCTACAATGTTCAGTGA+AGG | - | chr8_1:66336336-66336355 | Msa1208310:intron | 40.0% | |
| TGCTACAATGTTCAGTGAAG+GGG | - | chr8_1:66336338-66336357 | Msa1208310:intron | 40.0% | |
| ! | GGACTTGGCTTTCTCTAATA+GGG | - | chr8_1:66336359-66336378 | Msa1208310:intron | 40.0% |
| TCCGAGAATCTTCATCACAT+TGG | + | chr8_1:66336503-66336522 | None:intergenic | 40.0% | |
| CTGGTCAGTTATGACAGATT+TGG | + | chr8_1:66336765-66336784 | None:intergenic | 40.0% | |
| CAAATCTGTCATAACTGACC+AGG | - | chr8_1:66336763-66336782 | Msa1208310:intron | 40.0% | |
| TGTCATAACTGACCAGGATT+TGG | - | chr8_1:66336769-66336788 | Msa1208310:intron | 40.0% | |
| ! | TTGGCTATGAAAGCTGCTTT+AGG | - | chr8_1:66336788-66336807 | Msa1208310:intron | 40.0% |
| TCCTAATATGCCATAAGCAG+AGG | + | chr8_1:66336841-66336860 | None:intergenic | 40.0% | |
| GACAACAATGAATGGCTTCA+AGG | - | chr8_1:66337001-66337020 | Msa1208310:intron | 40.0% | |
| ! | ATCTTGAGCATTGTAGTTGC+TGG | + | chr8_1:66337401-66337420 | None:intergenic | 40.0% |
| !! | AGTTTTTGGGGATATTGTGC+AGG | - | chr8_1:66337482-66337501 | Msa1208310:intron | 40.0% |
| CGCTGCAAAATAAAATGGTC+AGG | + | chr8_1:66337550-66337569 | None:intergenic | 40.0% | |
| GCACGCCAAAGATATTAAGA+AGG | - | chr8_1:66337638-66337657 | Msa1208310:intron | 40.0% | |
| !! | ACATTTTGGCCAGATTCCAA+AGG | + | chr8_1:66337814-66337833 | None:intergenic | 40.0% |
| CACGCAATGCACAAACAAAA+GGG | - | chr8_1:66337890-66337909 | Msa1208310:intron | 40.0% | |
| ! | AGAAAAGCATGTCATGAGTG+TGG | - | chr8_1:66338000-66338019 | Msa1208310:intron | 40.0% |
| TCGTGTTTAGTTGTCTGGTC+TGG | + | chr8_1:66333361-66333380 | None:intergenic | 45.0% | |
| CCACATCGTGTTTAGTTGTC+TGG | + | chr8_1:66333366-66333385 | None:intergenic | 45.0% | |
| CCAGACAACTAAACACGATG+TGG | - | chr8_1:66333363-66333382 | Msa1208310:CDS | 45.0% | |
| TGCTTCCTTAATCAGTGCTC+CGG | + | chr8_1:66333448-66333467 | None:intergenic | 45.0% | |
| TGGTTTCCTTAACCAGTGTC+CGG | - | chr8_1:66333554-66333573 | Msa1208310:CDS | 45.0% | |
| !! | TTCCTTCATCTTTTGGGTGG+GGG | + | chr8_1:66333984-66334003 | None:intergenic | 45.0% |
| CTCATGAGTGTTAGTCAGTG+TGG | - | chr8_1:66334009-66334028 | Msa1208310:intron | 45.0% | |
| TAGTCAGTGTGGCACAATCA+TGG | - | chr8_1:66334020-66334039 | Msa1208310:intron | 45.0% | |
| CAGCCCCTCCCTATATTATT+AGG | - | chr8_1:66334044-66334063 | Msa1208310:intron | 45.0% | |
| GCAGCACATTCCGGTAAATA+TGG | + | chr8_1:66334868-66334887 | None:intergenic | 45.0% | |
| GGAATGTGCTGCAATTACCT+TGG | - | chr8_1:66334876-66334895 | Msa1208310:intron | 45.0% | |
| ATGTGTGTAGATGTGGAGAG+AGG | + | chr8_1:66335203-66335222 | None:intergenic | 45.0% | |
| ! | GAAGGGCATGTGCTTAACAA+TGG | + | chr8_1:66335324-66335343 | None:intergenic | 45.0% |
| AGCCACACAGTCAACAAATG+TGG | - | chr8_1:66335834-66335853 | Msa1208310:intron | 45.0% | |
| TTAGCTGCTGCTCCTAATGT+TGG | - | chr8_1:66335877-66335896 | Msa1208310:intron | 45.0% | |
| TAGTGAACCTTGTAAGGGGA+TGG | - | chr8_1:66335912-66335931 | Msa1208310:intron | 45.0% | |
| GGGGATGGAATTCAAATCTG+TGG | - | chr8_1:66335927-66335946 | Msa1208310:intron | 45.0% | |
| !!! | TTTTAGGGCTAACCATGGGA+TGG | + | chr8_1:66336224-66336243 | None:intergenic | 45.0% |
| !!! | CACACTTTTAGGGCTAACCA+TGG | + | chr8_1:66336229-66336248 | None:intergenic | 45.0% |
| AAGGAAGATGGTATACCGAC+AGG | - | chr8_1:66336309-66336328 | Msa1208310:intron | 45.0% | |
| AGATGGTATACCGACAGGAA+AGG | - | chr8_1:66336314-66336333 | Msa1208310:intron | 45.0% | |
| AATGTTCAGTGAAGGGGACT+TGG | - | chr8_1:66336344-66336363 | Msa1208310:intron | 45.0% | |
| ! | GGGACTTGGCTTTCTCTAAT+AGG | - | chr8_1:66336358-66336377 | Msa1208310:intron | 45.0% |
| AATCCAACAAACGGGGCAAA+TGG | + | chr8_1:66336629-66336648 | None:intergenic | 45.0% | |
| CAGCTTTCATAGCCAAATCC+TGG | + | chr8_1:66336784-66336803 | None:intergenic | 45.0% | |
| GCCTCTGCTTATGGCATATT+AGG | - | chr8_1:66336837-66336856 | Msa1208310:intron | 45.0% | |
| !! | ACGGACTGGACAACAATGAA+TGG | - | chr8_1:66336993-66337012 | Msa1208310:intron | 45.0% |
| GTCTACAGGGTCAAAACTTG+AGG | - | chr8_1:66337252-66337271 | Msa1208310:intron | 45.0% | |
| GCATGCTCAACAAGAAGCAA+AGG | - | chr8_1:66337663-66337682 | Msa1208310:intron | 45.0% | |
| ! | CAGTGATGGAGTTTCTCCTT+TGG | - | chr8_1:66337795-66337814 | Msa1208310:intron | 45.0% |
| !! | GGAGTTTCTCCTTTGGAATC+TGG | - | chr8_1:66337802-66337821 | Msa1208310:intron | 45.0% |
| CAACCAAAATTGCTTGTCGG+AGG | - | chr8_1:66337834-66337853 | Msa1208310:intron | 45.0% | |
| ! | CTTCCTCCGACAAGCAATTT+TGG | + | chr8_1:66337840-66337859 | None:intergenic | 45.0% |
| !! | CCTTTTGTTTGTGCATTGCG+TGG | + | chr8_1:66337892-66337911 | None:intergenic | 45.0% |
| CCACGCAATGCACAAACAAA+AGG | - | chr8_1:66337889-66337908 | Msa1208310:intron | 45.0% | |
| TGTCATGAGTGTGGTGAATC+TGG | - | chr8_1:66338009-66338028 | Msa1208310:intron | 45.0% | |
| !! | TTATAAAAATTAAAAATGTT+TGG | + | chr8_1:66334458-66334477 | None:intergenic | 5.0% |
| !! | TTAATTATAATTAAAATGAA+TGG | + | chr8_1:66335137-66335156 | None:intergenic | 5.0% |
| !!! | TTCATTTTAATTATAATTAA+TGG | - | chr8_1:66335137-66335156 | Msa1208310:CDS | 5.0% |
| GAAATGTTAACCGGTGTCCC+CGG | - | chr8_1:66333426-66333445 | Msa1208310:CDS | 50.0% | |
| CTTCCTTAATCAGTGCTCCG+GGG | + | chr8_1:66333446-66333465 | None:intergenic | 50.0% | |
| GCTTCCTTAATCAGTGCTCC+GGG | + | chr8_1:66333447-66333466 | None:intergenic | 50.0% | |
| GTTGTGTTAACCGGTGCTTC+CGG | + | chr8_1:66333576-66333595 | None:intergenic | 50.0% | |
| ACAATGGATGTAGCAGGTGG+AGG | + | chr8_1:66335308-66335327 | None:intergenic | 50.0% | |
| TGCTGCTCCTAATGTTGGTG+AGG | - | chr8_1:66335882-66335901 | Msa1208310:intron | 50.0% | |
| ! | ATGCCATTTGCCCCGTTTGT+TGG | - | chr8_1:66336623-66336642 | Msa1208310:intron | 50.0% |
| ! | CAGAGGCGATGTCTAGTTTC+TGG | + | chr8_1:66336824-66336843 | None:intergenic | 50.0% |
| CTAGACATCGCCTCTGCTTA+TGG | - | chr8_1:66336828-66336847 | Msa1208310:intron | 50.0% | |
| ! | TGATTTGAGGCGCACTCGTA+TGG | - | chr8_1:66337738-66337757 | Msa1208310:intron | 50.0% |
| !! | TGTCCCCGGAGCACTGATTA+AGG | - | chr8_1:66333440-66333459 | Msa1208310:CDS | 55.0% |
| ! | GTGCTTCCGGACACTGGTTA+AGG | + | chr8_1:66333563-66333582 | None:intergenic | 55.0% |
| ! | TAACCAGTGTCCGGAAGCAC+CGG | - | chr8_1:66333563-66333582 | Msa1208310:CDS | 55.0% |
| AGCCCCCACCCAAAAGATGA+AGG | - | chr8_1:66333979-66333998 | Msa1208310:intron | 55.0% | |
| GCACGTGGGAAAGTGGCTAA+TGG | + | chr8_1:66334070-66334089 | None:intergenic | 55.0% | |
| AATCAGTGCTCCGGGGACAC+CGG | + | chr8_1:66333439-66333458 | None:intergenic | 60.0% | |
| TAACCGGTGCTTCCGGACAC+TGG | + | chr8_1:66333569-66333588 | None:intergenic | 60.0% | |
| ! | CAGGTTGGCACGTGGGAAAG+TGG | + | chr8_1:66334077-66334096 | None:intergenic | 60.0% |
| ! | CTAAGGGCAGGTTGGCACGT+GGG | + | chr8_1:66334084-66334103 | None:intergenic | 60.0% |
| TGCCAACCTGCCCTTAGCGT+GGG | - | chr8_1:66334087-66334106 | Msa1208310:CDS | 60.0% | |
| ! | GCTAAGGGCAGGTTGGCACG+TGG | + | chr8_1:66334085-66334104 | None:intergenic | 65.0% |
| GTGCCAACCTGCCCTTAGCG+TGG | - | chr8_1:66334086-66334105 | Msa1208310:CDS | 65.0% | |
| CAACCTGCCCTTAGCGTGGG+CGG | - | chr8_1:66334090-66334109 | Msa1208310:CDS | 65.0% | |
| GGCAACTCCGCCCACGCTAA+GGG | + | chr8_1:66334100-66334119 | None:intergenic | 65.0% | |
| TGGCAACTCCGCCCACGCTA+AGG | + | chr8_1:66334101-66334120 | None:intergenic | 65.0% | |
| CGCCCACGCTAAGGGCAGGT+TGG | + | chr8_1:66334092-66334111 | None:intergenic | 70.0% | |
| ACTCCGCCCACGCTAAGGGC+AGG | + | chr8_1:66334096-66334115 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 66333287 | 66338074 | 66333287 | ID=Msa1208310;Name=Msa1208310 |
| chr8_1 | mRNA | 66333287 | 66338074 | 66333287 | ID=Msa1208310-mRNA-1;Parent=Msa1208310;Name=Msa1208310-mRNA-1;_AED=0.08;_eAED=0.10;_QI=0|0|0|0.75|0.14|0.12|8|0|462 |
| chr8_1 | exon | 66338069 | 66338074 | 66338069 | ID=Msa1208310-mRNA-1:exon:21826;Parent=Msa1208310-mRNA-1 |
| chr8_1 | exon | 66337124 | 66337129 | 66337124 | ID=Msa1208310-mRNA-1:exon:21825;Parent=Msa1208310-mRNA-1 |
| chr8_1 | exon | 66335416 | 66335565 | 66335416 | ID=Msa1208310-mRNA-1:exon:21824;Parent=Msa1208310-mRNA-1 |
| chr8_1 | exon | 66335190 | 66335406 | 66335190 | ID=Msa1208310-mRNA-1:exon:21823;Parent=Msa1208310-mRNA-1 |
| chr8_1 | exon | 66335043 | 66335177 | 66335043 | ID=Msa1208310-mRNA-1:exon:21822;Parent=Msa1208310-mRNA-1 |
| chr8_1 | exon | 66334338 | 66334395 | 66334338 | ID=Msa1208310-mRNA-1:exon:21821;Parent=Msa1208310-mRNA-1 |
| chr8_1 | exon | 66334077 | 66334322 | 66334077 | ID=Msa1208310-mRNA-1:exon:21820;Parent=Msa1208310-mRNA-1 |
| chr8_1 | exon | 66333287 | 66333857 | 66333287 | ID=Msa1208310-mRNA-1:exon:21819;Parent=Msa1208310-mRNA-1 |
| chr8_1 | CDS | 66338069 | 66338074 | 66338069 | ID=Msa1208310-mRNA-1:cds;Parent=Msa1208310-mRNA-1 |
| chr8_1 | CDS | 66337124 | 66337129 | 66337124 | ID=Msa1208310-mRNA-1:cds;Parent=Msa1208310-mRNA-1 |
| chr8_1 | CDS | 66335416 | 66335565 | 66335416 | ID=Msa1208310-mRNA-1:cds;Parent=Msa1208310-mRNA-1 |
| chr8_1 | CDS | 66335190 | 66335406 | 66335190 | ID=Msa1208310-mRNA-1:cds;Parent=Msa1208310-mRNA-1 |
| chr8_1 | CDS | 66335043 | 66335177 | 66335043 | ID=Msa1208310-mRNA-1:cds;Parent=Msa1208310-mRNA-1 |
| chr8_1 | CDS | 66334338 | 66334395 | 66334338 | ID=Msa1208310-mRNA-1:cds;Parent=Msa1208310-mRNA-1 |
| chr8_1 | CDS | 66334077 | 66334322 | 66334077 | ID=Msa1208310-mRNA-1:cds;Parent=Msa1208310-mRNA-1 |
| chr8_1 | CDS | 66333287 | 66333857 | 66333287 | ID=Msa1208310-mRNA-1:cds;Parent=Msa1208310-mRNA-1 |
| Gene Sequence |
| Protein sequence |
