Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1447540 | sp|Q9FTA0|GEML4_ARATH | 51.852 | 189 | 83 | 2 | 187 | 368 | 31 | 218 | 4.71e-60 | 196 |
| Msa1447540 | sp|Q9FTA0|GEML4_ARATH | 47.239 | 163 | 85 | 1 | 30 | 191 | 23 | 185 | 1.32e-42 | 151 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1447540 | A0A371GW26 | 54.034 | 409 | 116 | 5 | 2 | 363 | 59 | 442 | 8.13e-138 | 416 |
| Msa1447540 | A0A371GW26 | 55.854 | 410 | 109 | 6 | 3 | 365 | 250 | 634 | 4.22e-142 | 427 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1416180 | Msa1447540 | 0.863022 | 3.348650e-64 | -8.615850e-47 |
| Msa1441710 | Msa1447540 | 0.810307 | 1.230417e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1447540 | MtrunA17_Chr1g0212171 | 89.286 | 196 | 21 | 0 | 1 | 196 | 1 | 196 | 1.76e-122 | 353 |
| Msa1447540 | MtrunA17_Chr1g0212171 | 88.000 | 175 | 21 | 0 | 195 | 369 | 51 | 225 | 7.18e-111 | 323 |
| Msa1447540 | MtrunA17_Chr1g0212181 | 87.912 | 182 | 22 | 0 | 196 | 377 | 49 | 230 | 1.92e-115 | 335 |
| Msa1447540 | MtrunA17_Chr1g0212181 | 79.058 | 191 | 37 | 1 | 1 | 191 | 1 | 188 | 1.16e-104 | 308 |
| Msa1447540 | MtrunA17_Chr1g0212121 | 73.980 | 196 | 48 | 1 | 1 | 196 | 1 | 193 | 7.73e-101 | 297 |
| Msa1447540 | MtrunA17_Chr1g0212121 | 80.588 | 170 | 33 | 0 | 196 | 365 | 49 | 218 | 1.29e-97 | 289 |
| Msa1447540 | MtrunA17_Chr1g0162171 | 59.563 | 183 | 64 | 1 | 193 | 365 | 41 | 223 | 3.21e-72 | 224 |
| Msa1447540 | MtrunA17_Chr1g0162171 | 49.239 | 197 | 83 | 3 | 5 | 191 | 4 | 193 | 2.25e-56 | 184 |
| Msa1447540 | MtrunA17_Chr1g0212091 | 60.366 | 164 | 65 | 0 | 203 | 366 | 59 | 222 | 1.97e-69 | 217 |
| Msa1447540 | MtrunA17_Chr1g0212091 | 51.546 | 194 | 88 | 4 | 1 | 191 | 1 | 191 | 1.00e-58 | 190 |
| Msa1447540 | MtrunA17_Chr8g0388871 | 53.548 | 155 | 71 | 1 | 212 | 365 | 31 | 185 | 5.87e-54 | 176 |
| Msa1447540 | MtrunA17_Chr8g0388871 | 48.201 | 139 | 71 | 1 | 60 | 197 | 23 | 161 | 3.46e-36 | 130 |
| Msa1447540 | MtrunA17_Chr6g0481891 | 51.948 | 154 | 74 | 0 | 213 | 366 | 47 | 200 | 1.04e-50 | 168 |
| Msa1447540 | MtrunA17_Chr6g0481891 | 40.476 | 168 | 95 | 1 | 30 | 197 | 13 | 175 | 3.58e-34 | 125 |
| Msa1447540 | MtrunA17_Chr1g0212111 | 61.261 | 111 | 43 | 0 | 255 | 365 | 47 | 157 | 9.82e-42 | 144 |
| Msa1447540 | MtrunA17_Chr1g0212111 | 55.556 | 81 | 36 | 0 | 111 | 191 | 47 | 127 | 2.05e-22 | 93.2 |
| Msa1447540 | MtrunA17_Chr1g0212131 | 83.077 | 65 | 11 | 0 | 302 | 366 | 1 | 65 | 5.77e-33 | 117 |
| Msa1447540 | MtrunA17_Chr1g0212131 | 70.732 | 41 | 12 | 0 | 158 | 198 | 1 | 41 | 5.74e-13 | 63.5 |
| Msa1447540 | MtrunA17_Chr7g0251801 | 32.447 | 188 | 124 | 1 | 177 | 364 | 92 | 276 | 6.57e-32 | 122 |
| Msa1447540 | MtrunA17_Chr7g0251801 | 32.231 | 121 | 82 | 0 | 56 | 176 | 112 | 232 | 8.74e-20 | 88.6 |
| Msa1447540 | MtrunA17_Chr3g0133221 | 34.194 | 155 | 101 | 1 | 208 | 362 | 102 | 255 | 1.95e-31 | 119 |
| Msa1447540 | MtrunA17_Chr3g0133221 | 33.071 | 127 | 84 | 1 | 65 | 191 | 103 | 228 | 1.43e-20 | 90.1 |
| Msa1447540 | MtrunA17_Chr8g0367701 | 33.962 | 159 | 104 | 1 | 204 | 362 | 110 | 267 | 4.56e-30 | 116 |
| Msa1447540 | MtrunA17_Chr8g0367701 | 32.331 | 133 | 89 | 1 | 59 | 191 | 109 | 240 | 4.05e-20 | 89.4 |
| Msa1447540 | MtrunA17_Chr2g0315771 | 34.270 | 178 | 113 | 2 | 191 | 364 | 50 | 227 | 1.52e-25 | 103 |
| Msa1447540 | MtrunA17_Chr2g0315771 | 35.246 | 122 | 78 | 1 | 60 | 180 | 66 | 187 | 6.12e-16 | 76.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1447540 | AT5G08350.1 | 51.852 | 189 | 83 | 2 | 187 | 368 | 31 | 218 | 4.79e-61 | 196 |
| Msa1447540 | AT5G08350.1 | 47.239 | 163 | 85 | 1 | 30 | 191 | 23 | 185 | 1.34e-43 | 151 |
| Msa1447540 | AT5G23370.1 | 56.410 | 156 | 68 | 0 | 208 | 363 | 59 | 214 | 1.67e-60 | 194 |
| Msa1447540 | AT5G23370.1 | 46.286 | 175 | 92 | 2 | 19 | 191 | 12 | 186 | 4.13e-46 | 157 |
| Msa1447540 | AT5G23350.1 | 53.086 | 162 | 76 | 0 | 202 | 363 | 53 | 214 | 3.79e-58 | 189 |
| Msa1447540 | AT5G23350.1 | 52.239 | 134 | 64 | 0 | 58 | 191 | 53 | 186 | 2.54e-43 | 150 |
| Msa1447540 | AT5G23360.1 | 47.753 | 178 | 92 | 1 | 187 | 364 | 31 | 207 | 2.72e-56 | 183 |
| Msa1447540 | AT5G23360.1 | 47.059 | 170 | 82 | 3 | 30 | 198 | 23 | 185 | 3.76e-42 | 147 |
| Msa1447540 | AT5G13200.1 | 36.066 | 183 | 115 | 1 | 181 | 363 | 81 | 261 | 1.36e-33 | 126 |
| Msa1447540 | AT5G13200.1 | 33.858 | 127 | 84 | 0 | 60 | 186 | 102 | 228 | 7.92e-21 | 91.7 |
| Msa1447540 | AT4G01600.3 | 36.250 | 160 | 101 | 1 | 204 | 362 | 26 | 185 | 6.70e-32 | 119 |
| Msa1447540 | AT4G01600.3 | 35.507 | 138 | 88 | 1 | 50 | 186 | 16 | 153 | 3.75e-22 | 93.2 |
| Msa1447540 | AT4G01600.1 | 36.250 | 160 | 101 | 1 | 204 | 362 | 65 | 224 | 1.15e-31 | 120 |
| Msa1447540 | AT4G01600.1 | 35.507 | 138 | 88 | 1 | 50 | 186 | 55 | 192 | 7.83e-22 | 93.6 |
| Msa1447540 | AT4G01600.2 | 37.415 | 147 | 91 | 1 | 217 | 362 | 73 | 219 | 1.70e-29 | 114 |
| Msa1447540 | AT4G01600.2 | 35.507 | 138 | 83 | 2 | 50 | 186 | 55 | 187 | 1.51e-18 | 84.3 |
| Msa1447540 | AT1G28200.1 | 31.183 | 186 | 120 | 2 | 184 | 362 | 70 | 254 | 3.89e-29 | 114 |
| Msa1447540 | AT1G28200.1 | 33.613 | 119 | 78 | 1 | 60 | 178 | 97 | 214 | 6.11e-19 | 85.9 |
| Msa1447540 | AT1G28200.2 | 31.183 | 186 | 120 | 2 | 184 | 362 | 70 | 254 | 3.89e-29 | 114 |
| Msa1447540 | AT1G28200.2 | 33.613 | 119 | 78 | 1 | 60 | 178 | 97 | 214 | 6.11e-19 | 85.9 |
| Msa1447540 | AT2G22475.1 | 31.875 | 160 | 108 | 1 | 208 | 367 | 138 | 296 | 1.38e-27 | 110 |
| Msa1447540 | AT2G22475.1 | 31.579 | 133 | 90 | 1 | 59 | 191 | 133 | 264 | 5.74e-19 | 86.7 |
| Msa1447540 | AT5G13200.2 | 35.514 | 107 | 69 | 0 | 60 | 166 | 102 | 208 | 1.99e-18 | 83.6 |
| Msa1447540 | AT5G13200.2 | 33.846 | 130 | 84 | 1 | 181 | 310 | 81 | 208 | 2.25e-17 | 80.5 |
| Msa1447540 | AT2G22475.2 | 31.579 | 114 | 77 | 1 | 59 | 172 | 133 | 245 | 3.29e-14 | 72.4 |
| Msa1447540 | AT2G22475.2 | 30.275 | 109 | 75 | 1 | 208 | 316 | 138 | 245 | 4.88e-12 | 65.9 |
Find 82 sgRNAs with CRISPR-Local
Find 389 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCTTCATGACATAGTTAT+TGG | 0.132924 | tig0031784:+30171 | Msa1447540:CDS |
| TCTAAGTATGTAGTATTTAA+AGG | 0.275399 | tig0031784:-30013 | None:intergenic |
| GTTCAGGACATACCTTATAT+TGG | 0.280926 | tig0031784:-35239 | None:intergenic |
| AAGGGTACTCACCATGTTCT+TGG | 0.303202 | tig0031784:-30454 | None:intergenic |
| AGGGGTACTCACCATGTTCT+TGG | 0.305997 | tig0031784:-34807 | None:intergenic |
| CCCTTCATTGACCTCAAAAT+AGG | 0.349137 | tig0031784:-35854 | None:intergenic |
| ATGAAGGGAGATTATTGTTA+TGG | 0.350767 | tig0031784:+35869 | Msa1447540:three_prime_UTR |
| ACCACATCTGGTCCTCTATC+TGG | 0.375547 | tig0031784:+30730 | Msa1447540:CDS |
| TAGAGGAAGTTATGCTTACT+TGG | 0.381511 | tig0031784:-30056 | None:intergenic |
| AGGGGCTCAAATTCTTCAAA+TGG | 0.390450 | tig0031784:+30624 | Msa1447540:CDS |
| TAAAGAGGACGTTGAGCTTA+GGG | 0.393383 | tig0031784:+35004 | Msa1447540:CDS |
| ACACACTTGATCTTCTTCAA+TGG | 0.403217 | tig0031784:-30940 | None:intergenic |
| AAGATTTGTGTTTGGTTGAA+AGG | 0.405842 | tig0031784:-30119 | None:intergenic |
| TAAAGAGGACATTGAGCTTA+GGG | 0.407061 | tig0031784:+30605 | Msa1447540:CDS |
| CTAAGTATGTAGTATTTAAA+GGG | 0.415500 | tig0031784:-30012 | None:intergenic |
| AATGCGTAGGATCCAATATA+AGG | 0.416880 | tig0031784:+35227 | Msa1447540:CDS |
| ATAAAGAGGACGTTGAGCTT+AGG | 0.430032 | tig0031784:+35003 | Msa1447540:CDS |
| AATGCGTAGGATCCGCTATA+AGG | 0.432925 | tig0031784:+30828 | Msa1447540:CDS |
| TGTTATCTCTCCACCACATC+TGG | 0.435363 | tig0031784:+30718 | Msa1447540:CDS |
| GAAAGGACTATAGAAGTAGA+AGG | 0.439099 | tig0031784:-30102 | None:intergenic |
| CGAAGATATGCTTTGAAATG+AGG | 0.444217 | tig0031784:+35596 | Msa1447540:three_prime_UTR |
| ATGTTATTATGCTCTAATAG+TGG | 0.463690 | tig0031784:-35523 | None:intergenic |
| TGTTATCTCTCCACCACATC+CGG | 0.474249 | tig0031784:+35117 | Msa1447540:CDS |
| CCTCTTCATCTCCAATGAAA+AGG | 0.477437 | tig0031784:+30756 | Msa1447540:CDS |
| CCTCTTCATCTCCAATGAAA+AGG | 0.477437 | tig0031784:+35155 | Msa1447540:CDS |
| ATAAAGAGGACATTGAGCTT+AGG | 0.479333 | tig0031784:+30604 | Msa1447540:CDS |
| TGATATATAAGATTTGTGTT+TGG | 0.481083 | tig0031784:-30127 | None:intergenic |
| ACCACATCCGGTCCTCTAGC+TGG | 0.484625 | tig0031784:+35129 | Msa1447540:CDS |
| CTTTGAAATGAGGGACTTCG+TGG | 0.487322 | tig0031784:+35606 | Msa1447540:three_prime_UTR |
| TATAGAAGTAGAAGGTGAAG+AGG | 0.489350 | tig0031784:-30094 | None:intergenic |
| CTACATACTTAGACTACAAA+GGG | 0.492097 | tig0031784:+30023 | Msa1447540:five_prime_UTR |
| CTTGATCTTCTTCAATGGAA+TGG | 0.496717 | tig0031784:-30935 | None:intergenic |
| GGGGCTCAAATTCTTCAAAT+GGG | 0.501460 | tig0031784:+30625 | Msa1447540:CDS |
| GACTCTTTGTGAGAGACTAT+CGG | 0.507719 | tig0031784:-30432 | None:intergenic |
| CTAACCAGGAAAAGCGCTGC+AGG | 0.509603 | tig0031784:+30405 | Msa1447540:CDS |
| TATTGTTCTCTCACTGCAGA+AGG | 0.510226 | tig0031784:-30782 | None:intergenic |
| TATTGTTCTCTCACTGCAGA+AGG | 0.510226 | tig0031784:-35181 | None:intergenic |
| GAATGAATACTCTGCCAATA+CGG | 0.512381 | tig0031784:-35813 | None:intergenic |
| AAGTAGAAGGTGAAGAGGAA+TGG | 0.513002 | tig0031784:-30089 | None:intergenic |
| CTTGATATTCTTCAGTGGAA+TGG | 0.537049 | tig0031784:-35334 | None:intergenic |
| GAAGATATGCTTTGAAATGA+GGG | 0.540103 | tig0031784:+35597 | Msa1447540:three_prime_UTR |
| TGTTATGGTAGAAAACAAGA+TGG | 0.540307 | tig0031784:+35884 | Msa1447540:three_prime_UTR |
| ATGAAGAGGAGACCAGATAG+AGG | 0.541014 | tig0031784:-30742 | None:intergenic |
| AACTTTCAAATATCTCGAGC+AGG | 0.543455 | tig0031784:+35464 | Msa1447540:CDS |
| ACCAGCTAGAGGACCGGATG+TGG | 0.545746 | tig0031784:-35130 | None:intergenic |
| TTGATATTGACATTGATTAG+TGG | 0.546039 | tig0031784:-30262 | None:intergenic |
| GGGGCTCAAATTCTTCAAGT+AGG | 0.547691 | tig0031784:+35024 | Msa1447540:CDS |
| GAGGAGACCAGCTAGAGGAC+CGG | 0.553573 | tig0031784:-35136 | None:intergenic |
| TTAGTGTGAGAGAAGGAGAG+AGG | 0.554677 | tig0031784:+35076 | Msa1447540:CDS |
| AGCTAGAGGACCGGATGTGG+TGG | 0.559552 | tig0031784:-35127 | None:intergenic |
| ACATATCTAAAACAATAAAG+AGG | 0.563370 | tig0031784:+30590 | Msa1447540:CDS |
| ACATATCTAAAACAATAAAG+AGG | 0.563370 | tig0031784:+34989 | Msa1447540:CDS |
| ACTACATACTTAGACTACAA+AGG | 0.565243 | tig0031784:+30022 | Msa1447540:five_prime_UTR |
| ATGGTTCATTCATATAGTAT+CGG | 0.565704 | tig0031784:+35682 | Msa1447540:intron |
| ATAAAAGTCTTCAATCAGAA+AGG | 0.566655 | tig0031784:+30802 | Msa1447540:CDS |
| ATAAAAGTCTTCAATCAGAA+AGG | 0.566655 | tig0031784:+35201 | Msa1447540:CDS |
| TGTTAATATAGAGACCGTAT+TGG | 0.573700 | tig0031784:+35799 | Msa1447540:three_prime_UTR |
| AGGTAGAGCAAATTCTAACC+AGG | 0.586749 | tig0031784:+30391 | Msa1447540:intron |
| ATATTAACAGTCACTGCTTG+CGG | 0.587455 | tig0031784:-35785 | None:intergenic |
| TTAGTGTGACAGAAGGGGAA+AGG | 0.588982 | tig0031784:+30677 | Msa1447540:CDS |
| AATTCTTCAAATGGGTGGAG+TGG | 0.590708 | tig0031784:+30633 | Msa1447540:CDS |
| CCAGGAAAAGCGCTGCAGGA+AGG | 0.598245 | tig0031784:+30409 | Msa1447540:CDS |
| GCTCAAATTCTTCAAGTAGG+TGG | 0.599531 | tig0031784:+35027 | Msa1447540:CDS |
| ATATGATCAAATTCAACAGT+CGG | 0.601025 | tig0031784:+30215 | Msa1447540:CDS |
| ATCAGAAAGGTCAAATGCGT+AGG | 0.606952 | tig0031784:+30815 | Msa1447540:CDS |
| ATCAGAAAGGTCAAATGCGT+AGG | 0.606952 | tig0031784:+35214 | Msa1447540:CDS |
| AATTCTTCAAGTAGGTGGAG+TGG | 0.608118 | tig0031784:+35032 | Msa1447540:CDS |
| GCTCAAATTCTTCAAATGGG+TGG | 0.612320 | tig0031784:+30628 | Msa1447540:CDS |
| TGTTGATGAAAGAGATCACT+CGG | 0.612401 | tig0031784:+35741 | Msa1447540:three_prime_UTR |
| AGATAGAGGACCAGATGTGG+TGG | 0.622202 | tig0031784:-30728 | None:intergenic |
| ACACACTTGATATTCTTCAG+TGG | 0.629365 | tig0031784:-35339 | None:intergenic |
| ACCAGATAGAGGACCAGATG+TGG | 0.629958 | tig0031784:-30731 | None:intergenic |
| ATATGTTGCTGAGATGATTG+TGG | 0.633252 | tig0031784:-30196 | None:intergenic |
| AAAGAGGACGTTGAGCTTAG+GGG | 0.634036 | tig0031784:+35005 | Msa1447540:CDS |
| TCACAAAGAGTCCAAGAACA+TGG | 0.635074 | tig0031784:+30443 | Msa1447540:CDS |
| TGAAGAAGATCAAGTGTGTG+AGG | 0.640170 | tig0031784:+30944 | Msa1447540:CDS |
| AATTCCAACCAGCAAAAGCG+CGG | 0.640219 | tig0031784:+34754 | Msa1447540:CDS |
| ATGAAGAGGAGACCAGCTAG+AGG | 0.648963 | tig0031784:-35141 | None:intergenic |
| ACACAAAGAGTCCAAGAACA+TGG | 0.649976 | tig0031784:+34796 | Msa1447540:CDS |
| AAAGAGGACATTGAGCTTAG+GGG | 0.650107 | tig0031784:+30606 | Msa1447540:CDS |
| GTTCACGACTTACCTTATAG+CGG | 0.664347 | tig0031784:-30840 | None:intergenic |
| CATTCATCGACAGAGAAGAG+AGG | 0.697110 | tig0031784:+35831 | Msa1447540:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGAAAGTTTTTTTATATTTT+AGG | - | tig0031784:35452-35471 | None:intergenic | 10.0% |
| !!! | TGAATTTTAAATTCAATGAA+GGG | + | tig0031784:31428-31447 | Msa1447540:intron | 15.0% |
| !! | TAATTGACACAATTATTTAA+AGG | - | tig0031784:31637-31656 | None:intergenic | 15.0% |
| !!! | TGACTATCAAAATTTAAAAT+TGG | - | tig0031784:31902-31921 | None:intergenic | 15.0% |
| !!! | GTTTCTTTTACTATAAATAT+AGG | + | tig0031784:32287-32306 | Msa1447540:intron | 15.0% |
| !!! | TTCATCATTTACTTTATTTT+TGG | + | tig0031784:33992-34011 | Msa1447540:intron | 15.0% |
| !!! | AAGATAATATTTTGACATAA+TGG | - | tig0031784:34241-34260 | None:intergenic | 15.0% |
| !! | CTAAGTATGTAGTATTTAAA+GGG | - | tig0031784:30015-30034 | None:intergenic | 20.0% |
| !! | TCTAAGTATGTAGTATTTAA+AGG | - | tig0031784:30016-30035 | None:intergenic | 20.0% |
| !! | TGATATATAAGATTTGTGTT+TGG | - | tig0031784:30130-30149 | None:intergenic | 20.0% |
| !! | TTAAATTAGATTCTTGTAAC+AGG | - | tig0031784:30322-30341 | None:intergenic | 20.0% |
| !!! | TTAATCTAATCAAGTATTGA+TGG | + | tig0031784:30338-30357 | Msa1447540:intron | 20.0% |
| !! | AATTAGATACAAAAGGAAAA+TGG | - | tig0031784:30527-30546 | None:intergenic | 20.0% |
| !! | TAAAGAGAATTAGATACAAA+AGG | - | tig0031784:30534-30553 | None:intergenic | 20.0% |
| !!! | ACATATCTAAAACAATAAAG+AGG | + | tig0031784:30590-30609 | Msa1447540:CDS | 20.0% |
| !! | ACATAACAAATATTGGATTA+GGG | - | tig0031784:30907-30926 | None:intergenic | 20.0% |
| !! | TACATAACAAATATTGGATT+AGG | - | tig0031784:30908-30927 | None:intergenic | 20.0% |
| !!! | CTTCATTGAATTTAAAATTC+AGG | - | tig0031784:31429-31448 | None:intergenic | 20.0% |
| !!! | CTGAATTTTAAATTCAATGA+AGG | + | tig0031784:31427-31446 | Msa1447540:intron | 20.0% |
| !! | ATTATTGTTATGGTTGAAAA+AGG | + | tig0031784:31453-31472 | Msa1447540:intron | 20.0% |
| !!! | ATTTTTCAGAAACGTATTTT+TGG | + | tig0031784:32240-32259 | Msa1447540:intron | 20.0% |
| !!! | TTTTTCAGAAACGTATTTTT+GGG | + | tig0031784:32241-32260 | Msa1447540:intron | 20.0% |
| !! | TCTATATGTTATGTATAAGT+AGG | - | tig0031784:32967-32986 | None:intergenic | 20.0% |
| !! | TAAGAAAACTGAAAAAGTAA+AGG | + | tig0031784:33005-33024 | Msa1447540:intron | 20.0% |
| !! | CTTACTAATTATCACTTTAT+AGG | - | tig0031784:33578-33597 | None:intergenic | 20.0% |
| !!! | AATCATGATTTGTTTATCAA+CGG | + | tig0031784:33656-33675 | Msa1447540:intron | 20.0% |
| !! | TAAAATTGAAATCCTAGAAT+AGG | - | tig0031784:34155-34174 | None:intergenic | 20.0% |
| !! | TATTTAAAAGGATGAAAAGT+AGG | - | tig0031784:34360-34379 | None:intergenic | 20.0% |
| !!! | CTAATTTCATTAAGTATTGA+TGG | + | tig0031784:34692-34711 | Msa1447540:intron | 20.0% |
| !! | CATAAATTGTACCATATTAT+TGG | - | tig0031784:34852-34871 | None:intergenic | 20.0% |
| !!! | TATATGTACTTATTTAGTTC+AGG | - | tig0031784:35258-35277 | None:intergenic | 20.0% |
| !! | ACATAACAAATATTGGATTA+GGG | - | tig0031784:30907-30926 | None:intergenic | 20.0% |
| ! | ATATGATCAAATTCAACAGT+CGG | + | tig0031784:30215-30234 | Msa1447540:CDS | 25.0% |
| !! | TTGATATTGACATTGATTAG+TGG | - | tig0031784:30265-30284 | None:intergenic | 25.0% |
| !! | ATAAAGTTATACTTTTGCAC+TGG | - | tig0031784:30296-30315 | None:intergenic | 25.0% |
| ! | ATAAAAGTCTTCAATCAGAA+AGG | + | tig0031784:30802-30821 | Msa1447540:CDS | 25.0% |
| !!! | ATCCAATATTTGTTATGTAC+AGG | + | tig0031784:30909-30928 | Msa1447540:intron | 25.0% |
| ! | AACCTGTACATAACAAATAT+TGG | - | tig0031784:30914-30933 | None:intergenic | 25.0% |
| !! | ATGTTTATGTACTTTTGTGT+TGG | - | tig0031784:30991-31010 | None:intergenic | 25.0% |
| !! | TGAAAGTTTTCTGATACTTT+AGG | - | tig0031784:31053-31072 | None:intergenic | 25.0% |
| ! | TTCTTTATGTTATGCTCTAA+GGG | - | tig0031784:31130-31149 | None:intergenic | 25.0% |
| ! | ATTCTTTATGTTATGCTCTA+AGG | - | tig0031784:31131-31150 | None:intergenic | 25.0% |
| !! | CAACATATTGTTGATAAAGT+TGG | + | tig0031784:31302-31321 | Msa1447540:intron | 25.0% |
| ! | GCTTATTTAAACTAACTGAT+TGG | - | tig0031784:31615-31634 | None:intergenic | 25.0% |
| !!! | TGTGTCAATTATTTCTTTTG+TGG | + | tig0031784:31646-31665 | Msa1447540:intron | 25.0% |
| ! | TAAAAAAGTAAGAATCCTTC+AGG | - | tig0031784:31732-31751 | None:intergenic | 25.0% |
| !!! | AAGGATTCTTACTTTTTTAG+TGG | + | tig0031784:31733-31752 | Msa1447540:intron | 25.0% |
| !!! | GCAGATTTGTTACAATTTTA+TGG | + | tig0031784:32263-32282 | Msa1447540:intron | 25.0% |
| ! | AAATATTAGCATAAGTTAGC+AGG | - | tig0031784:32802-32821 | None:intergenic | 25.0% |
| ! | CAAGGTAAGAAAAAGTAAAT+AGG | + | tig0031784:32914-32933 | Msa1447540:intron | 25.0% |
| ! | TATAAGTAGGATGTAGTATA+TGG | - | tig0031784:32954-32973 | None:intergenic | 25.0% |
| ! | AAAACTGAAAAAGTAAAGGA+AGG | + | tig0031784:33009-33028 | Msa1447540:intron | 25.0% |
| ! | TTTGTTCTACTACTATATAC+CGG | - | tig0031784:33100-33119 | None:intergenic | 25.0% |
| ! | TAGTAGAACAAAATCAAAAG+TGG | + | tig0031784:33108-33127 | Msa1447540:intron | 25.0% |
| ! | AAATCAAAAGTGGTAGTTAA+TGG | + | tig0031784:33118-33137 | Msa1447540:intron | 25.0% |
| !! | CTTTGTTAGTTACTTTGATT+TGG | + | tig0031784:33244-33263 | Msa1447540:intron | 25.0% |
| ! | AGCATTTCAATCATATATCT+TGG | + | tig0031784:33829-33848 | Msa1447540:intron | 25.0% |
| ! | AGATAGTAAAAATGAAGGTA+GGG | + | tig0031784:33852-33871 | Msa1447540:intron | 25.0% |
| ! | AGAATTCTCTAAATTCTCTT+GGG | - | tig0031784:33910-33929 | None:intergenic | 25.0% |
| ! | TAGAATTCTCTAAATTCTCT+TGG | - | tig0031784:33911-33930 | None:intergenic | 25.0% |
| !!! | TAGAATAGGTTTGTTTTTAG+AGG | - | tig0031784:34141-34160 | None:intergenic | 25.0% |
| ! | TCTAAAAACAAACCTATTCT+AGG | + | tig0031784:34140-34159 | Msa1447540:intron | 25.0% |
| ! | AGCATGTTGAATGATTAATA+AGG | - | tig0031784:34498-34517 | None:intergenic | 25.0% |
| !! | ATGTTCATGATTCTTTTAAC+AGG | - | tig0031784:34667-34686 | None:intergenic | 25.0% |
| ! | ATATAGATACCACATACAAA+AGG | - | tig0031784:34886-34905 | None:intergenic | 25.0% |
| ! | ATAAAAGTCTTCAATCAGAA+AGG | + | tig0031784:30802-30821 | Msa1447540:CDS | 25.0% |
| ! | CACATAACAAATATTGGATT+AGG | - | tig0031784:35307-35326 | None:intergenic | 25.0% |
| !! | ATGTTTATGTACTTTTGTGT+TGG | - | tig0031784:30991-31010 | None:intergenic | 25.0% |
| ! | ATGTTATTATGCTCTAATAG+TGG | - | tig0031784:35526-35545 | None:intergenic | 25.0% |
| ! | ATGGTTCATTCATATAGTAT+CGG | + | tig0031784:35682-35701 | Msa1447540:intron | 25.0% |
| ACTACATACTTAGACTACAA+AGG | + | tig0031784:30022-30041 | Msa1447540:five_prime_UTR | 30.0% | |
| CTACATACTTAGACTACAAA+GGG | + | tig0031784:30023-30042 | Msa1447540:five_prime_UTR | 30.0% | |
| AAGATTTGTGTTTGGTTGAA+AGG | - | tig0031784:30122-30141 | None:intergenic | 30.0% | |
| CTTCTTCATGACATAGTTAT+TGG | + | tig0031784:30171-30190 | Msa1447540:CDS | 30.0% | |
| ATAATGTGCTTCAATGTTTC+AGG | + | tig0031784:30371-30390 | Msa1447540:intron | 30.0% | |
| GTGAAAAATTTCAGTGAGAT+CGG | + | tig0031784:30561-30580 | Msa1447540:intron | 30.0% | |
| TGAAAAATTTCAGTGAGATC+GGG | + | tig0031784:30562-30581 | Msa1447540:intron | 30.0% | |
| !!! | AGTATTTTAGTGTGACAGAA+GGG | + | tig0031784:30671-30690 | Msa1447540:CDS | 30.0% |
| !!! | AATTTTGACTTCTGGCTTAT+GGG | + | tig0031784:31024-31043 | Msa1447540:intron | 30.0% |
| AACTTTCAAATATATCGAGC+AGG | + | tig0031784:31065-31084 | Msa1447540:intron | 30.0% | |
| ! | AAAACACCTCATCTTAGTTT+TGG | + | tig0031784:31243-31262 | Msa1447540:intron | 30.0% |
| ATGAAGGGAGATTATTGTTA+TGG | + | tig0031784:31443-31462 | Msa1447540:intron | 30.0% | |
| TTGTTATGGTTGAAAAAGGA+TGG | + | tig0031784:31457-31476 | Msa1447540:intron | 30.0% | |
| GTTTCTTAATGCAAAAGAAC+TGG | - | tig0031784:31710-31729 | None:intergenic | 30.0% | |
| ! | TTTTGCATTAAGAAACCTGA+AGG | + | tig0031784:31714-31733 | Msa1447540:intron | 30.0% |
| TTGTGAAAGTGACTCAAAAT+TGG | + | tig0031784:32065-32084 | Msa1447540:intron | 30.0% | |
| ! | CTTTCAGCAAACATCAATTT+TGG | - | tig0031784:32101-32120 | None:intergenic | 30.0% |
| AAATAACAGCATAGCGAAAT+CGG | - | tig0031784:32224-32243 | None:intergenic | 30.0% | |
| ! | AAAGGGTTTAGAATCAAACT+AGG | + | tig0031784:32350-32369 | Msa1447540:intron | 30.0% |
| ! | AAGGGTTTAGAATCAAACTA+GGG | + | tig0031784:32351-32370 | Msa1447540:intron | 30.0% |
| TATTCTGTAATCCATCTCTT+TGG | + | tig0031784:32496-32515 | Msa1447540:intron | 30.0% | |
| AAAAGAATTGTTGACCAGTT+CGG | - | tig0031784:32581-32600 | None:intergenic | 30.0% | |
| !!! | TCGTTGTTGTTTTCTACTTT+TGG | + | tig0031784:32623-32642 | Msa1447540:intron | 30.0% |
| !! | TGTTCCATACACTTTGATTT+TGG | + | tig0031784:32659-32678 | Msa1447540:intron | 30.0% |
| AATTCGCAACAAGAGTTATA+TGG | + | tig0031784:32738-32757 | Msa1447540:intron | 30.0% | |
| TACAAAGCTGAAAAGTGAAT+TGG | + | tig0031784:32766-32785 | Msa1447540:intron | 30.0% | |
| !!! | TTTCTGAGATTTTTCAATCC+CGG | + | tig0031784:33078-33097 | Msa1447540:intron | 30.0% |
| TTGTTCTACTACTATATACC+GGG | - | tig0031784:33099-33118 | None:intergenic | 30.0% | |
| AAATTAAGAGATTGAGCACA+TGG | + | tig0031784:33316-33335 | Msa1447540:intron | 30.0% | |
| !!! | TAAGCTGAAGTTTTGTTAAC+TGG | - | tig0031784:33519-33538 | None:intergenic | 30.0% |
| CCTAGAGTATGAATGATATT+TGG | - | tig0031784:33547-33566 | None:intergenic | 30.0% | |
| CCAAATATCATTCATACTCT+AGG | + | tig0031784:33544-33563 | Msa1447540:intron | 30.0% | |
| CTTGGAGATAGTAAAAATGA+AGG | + | tig0031784:33847-33866 | Msa1447540:intron | 30.0% | |
| GAGATAGTAAAAATGAAGGT+AGG | + | tig0031784:33851-33870 | Msa1447540:intron | 30.0% | |
| GAATTCTCTAAATTCTCTTG+GGG | - | tig0031784:33909-33928 | None:intergenic | 30.0% | |
| TTTGGAAAGTAGGCATTATT+AGG | - | tig0031784:34026-34045 | None:intergenic | 30.0% | |
| ATAATGCCTACTTTCCAAAA+TGG | + | tig0031784:34027-34046 | Msa1447540:intron | 30.0% | |
| CTTTCAGAAAAAGATGGTAA+AGG | - | tig0031784:34206-34225 | None:intergenic | 30.0% | |
| !!! | TTTTGACATAATGGACTGTT+TGG | - | tig0031784:34232-34251 | None:intergenic | 30.0% |
| TATTACATCAACCAAGATCA+TGG | + | tig0031784:34300-34319 | Msa1447540:intron | 30.0% | |
| CTAAGGAGGTAGTATTTAAA+AGG | - | tig0031784:34372-34391 | None:intergenic | 30.0% | |
| TGAAACTGATGATACATGAT+TGG | - | tig0031784:34555-34574 | None:intergenic | 30.0% | |
| TGGATATTGAATTTGACAAG+AGG | - | tig0031784:34610-34629 | None:intergenic | 30.0% | |
| ! | ACAAAGTTTTACCTTTGCTT+TGG | - | tig0031784:34641-34660 | None:intergenic | 30.0% |
| ! | TAGATGGGTTTCCAATAATA+TGG | + | tig0031784:34838-34857 | Msa1447540:intron | 30.0% |
| ! | AACCATTTTCCTTTTGTATG+TGG | + | tig0031784:34874-34893 | Msa1447540:intron | 30.0% |
| TACCACATACAAAAGGAAAA+TGG | - | tig0031784:34879-34898 | None:intergenic | 30.0% | |
| TGAAAAATTTCAGTGAGACT+CGG | + | tig0031784:34961-34980 | Msa1447540:intron | 30.0% | |
| !! | ATCCAATATTTGTTATGTGC+AGG | + | tig0031784:35308-35327 | Msa1447540:intron | 30.0% |
| !!! | GATTTTGATTTCTGGCTTAT+GGG | + | tig0031784:35423-35442 | Msa1447540:CDS | 30.0% |
| !! | GAAGATATGCTTTGAAATGA+GGG | + | tig0031784:35597-35616 | Msa1447540:three_prime_UTR | 30.0% |
| ! | TGTGCATCTATTTTCATCTT+GGG | - | tig0031784:35663-35682 | None:intergenic | 30.0% |
| ! | ATGTGCATCTATTTTCATCT+TGG | - | tig0031784:35664-35683 | None:intergenic | 30.0% |
| AAGATGAAAATAGATGCACA+TGG | + | tig0031784:35663-35682 | Msa1447540:intron | 30.0% | |
| TGTTAATATAGAGACCGTAT+TGG | + | tig0031784:35799-35818 | Msa1447540:three_prime_UTR | 30.0% | |
| ATGAAGGGAGATTATTGTTA+TGG | + | tig0031784:31443-31462 | Msa1447540:intron | 30.0% | |
| TGTTATGGTAGAAAACAAGA+TGG | + | tig0031784:35884-35903 | Msa1447540:three_prime_UTR | 30.0% | |
| TAGAGGAAGTTATGCTTACT+TGG | - | tig0031784:30059-30078 | None:intergenic | 35.0% | |
| TATAGAAGTAGAAGGTGAAG+AGG | - | tig0031784:30097-30116 | None:intergenic | 35.0% | |
| GAAAGGACTATAGAAGTAGA+AGG | - | tig0031784:30105-30124 | None:intergenic | 35.0% | |
| ATATGTTGCTGAGATGATTG+TGG | - | tig0031784:30199-30218 | None:intergenic | 35.0% | |
| !! | TATACTTTTGCACTGGTGTT+TGG | - | tig0031784:30289-30308 | None:intergenic | 35.0% |
| ATAAAGAGGACATTGAGCTT+AGG | + | tig0031784:30604-30623 | Msa1447540:CDS | 35.0% | |
| TAAAGAGGACATTGAGCTTA+GGG | + | tig0031784:30605-30624 | Msa1447540:CDS | 35.0% | |
| !!! | CAGTATTTTAGTGTGACAGA+AGG | + | tig0031784:30670-30689 | Msa1447540:CDS | 35.0% |
| !!! | GTATTTTAGTGTGACAGAAG+GGG | + | tig0031784:30672-30691 | Msa1447540:CDS | 35.0% |
| CTTGATCTTCTTCAATGGAA+TGG | - | tig0031784:30938-30957 | None:intergenic | 35.0% | |
| ACACACTTGATCTTCTTCAA+TGG | - | tig0031784:30943-30962 | None:intergenic | 35.0% | |
| !!! | CAATTTTGACTTCTGGCTTA+TGG | + | tig0031784:31023-31042 | Msa1447540:intron | 35.0% |
| !! | TTTATGTTATGCTCTAAGGG+TGG | - | tig0031784:31127-31146 | None:intergenic | 35.0% |
| !! | TGAAGATATGCTTTGAAACG+AGG | + | tig0031784:31208-31227 | Msa1447540:intron | 35.0% |
| !! | GAAGATATGCTTTGAAACGA+GGG | + | tig0031784:31209-31228 | Msa1447540:intron | 35.0% |
| ATGAAGCCAAAACTAAGATG+AGG | - | tig0031784:31252-31271 | None:intergenic | 35.0% | |
| TGGCTTCATTGATATTAGCT+CGG | + | tig0031784:31263-31282 | Msa1447540:intron | 35.0% | |
| TATTAGCTCGGATGTAAACT+TGG | + | tig0031784:31275-31294 | Msa1447540:intron | 35.0% | |
| ! | TGGTAATGCAAGAGATCATT+TGG | + | tig0031784:31322-31341 | Msa1447540:intron | 35.0% |
| TATGGTTGAAAAAGGATGGA+AGG | + | tig0031784:31461-31480 | Msa1447540:intron | 35.0% | |
| !! | TTTTCTTGTAGGGGTTGATT+TGG | - | tig0031784:31820-31839 | None:intergenic | 35.0% |
| ! | TTGCACCATGTTTTCTTGTA+GGG | - | tig0031784:31830-31849 | None:intergenic | 35.0% |
| ! | CTGTTTTGTAACCTAGTACA+AGG | - | tig0031784:31865-31884 | None:intergenic | 35.0% |
| CTTGTACTAGGTTACAAAAC+AGG | + | tig0031784:31863-31882 | Msa1447540:intron | 35.0% | |
| AGTGACTCAAAATTGGAGTT+TGG | + | tig0031784:32072-32091 | Msa1447540:intron | 35.0% | |
| ! | TTTGCTGAAAGTACAATCGT+TGG | + | tig0031784:32110-32129 | Msa1447540:intron | 35.0% |
| CTCTCAAAATAGTCTGATAC+AGG | - | tig0031784:32313-32332 | None:intergenic | 35.0% | |
| !! | AGACTATTTTGAGAGAGATG+AGG | + | tig0031784:32318-32337 | Msa1447540:intron | 35.0% |
| !! | GACTATTTTGAGAGAGATGA+GGG | + | tig0031784:32319-32338 | Msa1447540:intron | 35.0% |
| !! | ACTATTTTGAGAGAGATGAG+GGG | + | tig0031784:32320-32339 | Msa1447540:intron | 35.0% |
| TTTGTCTCTTGCAACAAACT+AGG | + | tig0031784:32385-32404 | Msa1447540:intron | 35.0% | |
| TTGTCTCTTGCAACAAACTA+GGG | + | tig0031784:32386-32405 | Msa1447540:intron | 35.0% | |
| ! | TGGTAACGTTACTCATATAG+TGG | + | tig0031784:32516-32535 | Msa1447540:intron | 35.0% |
| ! | ACGTTACTCATATAGTGGAA+CGG | + | tig0031784:32521-32540 | Msa1447540:intron | 35.0% |
| GAAAACAACAACGAGAGAAA+AGG | - | tig0031784:32617-32636 | None:intergenic | 35.0% | |
| !! | GTTGTTTTCTACTTTTGGCT+TGG | + | tig0031784:32628-32647 | Msa1447540:intron | 35.0% |
| GCAACCAAAATCAAAGTGTA+TGG | - | tig0031784:32666-32685 | None:intergenic | 35.0% | |
| ! | TCCACACATCAAGTTGTTAT+TGG | + | tig0031784:32701-32720 | Msa1447540:intron | 35.0% |
| ACCAATAACAACTTGATGTG+TGG | - | tig0031784:32705-32724 | None:intergenic | 35.0% | |
| ! | ACATCAAGTTGTTATTGGTG+TGG | + | tig0031784:32706-32725 | Msa1447540:intron | 35.0% |
| !! | TGAAAAGTGAATTGGTGTTG+TGG | + | tig0031784:32774-32793 | Msa1447540:intron | 35.0% |
| ATCGCAAGGCAATTTAATGA+AGG | - | tig0031784:32893-32912 | None:intergenic | 35.0% | |
| TTAAATTGCCTTGCGATACA+AGG | + | tig0031784:32896-32915 | Msa1447540:intron | 35.0% | |
| ! | TTTTCTTACCTTGTATCGCA+AGG | - | tig0031784:32907-32926 | None:intergenic | 35.0% |
| AAAGTAAAGGAAGGTGAATG+AGG | + | tig0031784:33018-33037 | Msa1447540:intron | 35.0% | |
| GTCAAGTTTGTGAAAGTTCA+AGG | + | tig0031784:33043-33062 | Msa1447540:intron | 35.0% | |
| GTGGTAGTTAATGGTTCAAA+AGG | + | tig0031784:33127-33146 | Msa1447540:intron | 35.0% | |
| TTCAAAAGGCAGAGTATAGT+AGG | + | tig0031784:33141-33160 | Msa1447540:intron | 35.0% | |
| ! | GAATAATAACTGACTCTGTC+TGG | + | tig0031784:33266-33285 | Msa1447540:intron | 35.0% |
| ! | AGCACATGGTTCTGTATAAA+AGG | + | tig0031784:33330-33349 | Msa1447540:intron | 35.0% |
| ! | GCACATGGTTCTGTATAAAA+GGG | + | tig0031784:33331-33350 | Msa1447540:intron | 35.0% |
| ATATCCATGTGCATCCAATA+TGG | + | tig0031784:33366-33385 | Msa1447540:intron | 35.0% | |
| !! | ACAAATGGGTTACATTCACT+TGG | + | tig0031784:33422-33441 | Msa1447540:intron | 35.0% |
| AGTGAGGATTACTCAATTGA+GGG | - | tig0031784:33480-33499 | None:intergenic | 35.0% | |
| ATCCTCACTCACAAGATAAA+TGG | + | tig0031784:33491-33510 | Msa1447540:intron | 35.0% | |
| ATCCATTTATCTTGTGAGTG+AGG | - | tig0031784:33496-33515 | None:intergenic | 35.0% | |
| TATGCACATGCTAACAATCA+TGG | - | tig0031784:33629-33648 | None:intergenic | 35.0% | |
| ATCAGCATTGCTTTATGAGT+CGG | - | tig0031784:33954-33973 | None:intergenic | 35.0% | |
| !! | AATGCACCATTTTGGAAAGT+AGG | - | tig0031784:34036-34055 | None:intergenic | 35.0% |
| ! | TTTGGAGAAATGCACCATTT+TGG | - | tig0031784:34044-34063 | None:intergenic | 35.0% |
| AAAATGGTGCATTTCTCCAA+AGG | + | tig0031784:34043-34062 | Msa1447540:intron | 35.0% | |
| AAATGGTGCATTTCTCCAAA+GGG | + | tig0031784:34044-34063 | Msa1447540:intron | 35.0% | |
| ACAAGATTCCGTAGTGTATA+GGG | - | tig0031784:34085-34104 | None:intergenic | 35.0% | |
| AACAAGATTCCGTAGTGTAT+AGG | - | tig0031784:34086-34105 | None:intergenic | 35.0% | |
| !! | GTTTTTAGAGGCTTAGAGAA+AGG | - | tig0031784:34129-34148 | None:intergenic | 35.0% |
| ! | TGGTTGCTTTCAGAAAAAGA+TGG | - | tig0031784:34212-34231 | None:intergenic | 35.0% |
| TAATAAAGACACTACCCACA+TGG | - | tig0031784:34285-34304 | None:intergenic | 35.0% | |
| ! | ATCAGTCCTTTTGTGTTCTA+AGG | - | tig0031784:34389-34408 | None:intergenic | 35.0% |
| TAGAGGAAGTTATGTTTGCT+TGG | - | tig0031784:34419-34438 | None:intergenic | 35.0% | |
| TTGTTGAAAAGACTAGCACT+AGG | - | tig0031784:34467-34486 | None:intergenic | 35.0% | |
| AACTAGCTCATGATGAATTG+AGG | - | tig0031784:34523-34542 | None:intergenic | 35.0% | |
| ATTCATCATGAGCTAGTTGT+TGG | + | tig0031784:34525-34544 | Msa1447540:intron | 35.0% | |
| !! | TTTACCTTTGCTTTGGTGTT+TGG | - | tig0031784:34634-34653 | None:intergenic | 35.0% |
| AAACCCATCTAAGTCTTACA+GGG | - | tig0031784:34829-34848 | None:intergenic | 35.0% | |
| !!! | CAGTATTTTAGTGTGAGAGA+AGG | + | tig0031784:35069-35088 | Msa1447540:CDS | 35.0% |
| AATGCGTAGGATCCAATATA+AGG | + | tig0031784:35227-35246 | Msa1447540:CDS | 35.0% | |
| GTTCAGGACATACCTTATAT+TGG | - | tig0031784:35242-35261 | None:intergenic | 35.0% | |
| CACCTGCACATAACAAATAT+TGG | - | tig0031784:35313-35332 | None:intergenic | 35.0% | |
| !! | CAATATTTGTTATGTGCAGG+TGG | + | tig0031784:35311-35330 | Msa1447540:intron | 35.0% |
| CTTGATATTCTTCAGTGGAA+TGG | - | tig0031784:35337-35356 | None:intergenic | 35.0% | |
| ACACACTTGATATTCTTCAG+TGG | - | tig0031784:35342-35361 | None:intergenic | 35.0% | |
| !!! | CAGAAGACGATTTTGATTTC+TGG | + | tig0031784:35415-35434 | Msa1447540:CDS | 35.0% |
| !!! | CGATTTTGATTTCTGGCTTA+TGG | + | tig0031784:35422-35441 | Msa1447540:CDS | 35.0% |
| AACTTTCAAATATCTCGAGC+AGG | + | tig0031784:35464-35483 | Msa1447540:CDS | 35.0% | |
| !! | CGAAGATATGCTTTGAAATG+AGG | + | tig0031784:35596-35615 | Msa1447540:three_prime_UTR | 35.0% |
| ! | TGTTGATGAAAGAGATCACT+CGG | + | tig0031784:35741-35760 | Msa1447540:three_prime_UTR | 35.0% |
| ATATTAACAGTCACTGCTTG+CGG | - | tig0031784:35788-35807 | None:intergenic | 35.0% | |
| GAATGAATACTCTGCCAATA+CGG | - | tig0031784:35816-35835 | None:intergenic | 35.0% | |
| !!! | CCTATTTTGAGGTCAATGAA+GGG | + | tig0031784:35854-35873 | Msa1447540:three_prime_UTR | 35.0% |
| !!! | GGAATGGTTTTAGCTCTTAG+AGG | - | tig0031784:30076-30095 | None:intergenic | 40.0% |
| AAGTAGAAGGTGAAGAGGAA+TGG | - | tig0031784:30092-30111 | None:intergenic | 40.0% | |
| AGGTAGAGCAAATTCTAACC+AGG | + | tig0031784:30391-30410 | Msa1447540:intron | 40.0% | |
| GACTCTTTGTGAGAGACTAT+CGG | - | tig0031784:30435-30454 | None:intergenic | 40.0% | |
| TCACAAAGAGTCCAAGAACA+TGG | + | tig0031784:30443-30462 | Msa1447540:CDS | 40.0% | |
| ! | TACCCTTGTAAGACTTGGTT+GGG | + | tig0031784:30470-30489 | Msa1447540:intron | 40.0% |
| AACCCAACCAAGTCTTACAA+GGG | - | tig0031784:30475-30494 | None:intergenic | 40.0% | |
| AAACCCAACCAAGTCTTACA+AGG | - | tig0031784:30476-30495 | None:intergenic | 40.0% | |
| GGTTGGGTTTCAAAGAGATA+TGG | + | tig0031784:30486-30505 | Msa1447540:intron | 40.0% | |
| AAAGAGGACATTGAGCTTAG+GGG | + | tig0031784:30606-30625 | Msa1447540:CDS | 40.0% | |
| AGGGGCTCAAATTCTTCAAA+TGG | + | tig0031784:30624-30643 | Msa1447540:CDS | 40.0% | |
| GGGGCTCAAATTCTTCAAAT+GGG | + | tig0031784:30625-30644 | Msa1447540:CDS | 40.0% | |
| GCTCAAATTCTTCAAATGGG+TGG | + | tig0031784:30628-30647 | Msa1447540:CDS | 40.0% | |
| AATTCTTCAAATGGGTGGAG+TGG | + | tig0031784:30633-30652 | Msa1447540:CDS | 40.0% | |
| ! | CCTTTTCATTGGAGATGAAG+AGG | - | tig0031784:30759-30778 | None:intergenic | 40.0% |
| CCTCTTCATCTCCAATGAAA+AGG | + | tig0031784:30756-30775 | Msa1447540:CDS | 40.0% | |
| TATTGTTCTCTCACTGCAGA+AGG | - | tig0031784:30785-30804 | None:intergenic | 40.0% | |
| ATCAGAAAGGTCAAATGCGT+AGG | + | tig0031784:30815-30834 | Msa1447540:CDS | 40.0% | |
| GTTCACGACTTACCTTATAG+CGG | - | tig0031784:30843-30862 | None:intergenic | 40.0% | |
| TGAAGAAGATCAAGTGTGTG+AGG | + | tig0031784:30944-30963 | Msa1447540:CDS | 40.0% | |
| !!! | CAGTCGACAATTTTGACTTC+TGG | + | tig0031784:31016-31035 | Msa1447540:intron | 40.0% |
| GTTAATGACAAGGACCATAC+TGG | + | tig0031784:31374-31393 | Msa1447540:intron | 40.0% | |
| ATGGATACCTTCTACCAGTA+TGG | - | tig0031784:31391-31410 | None:intergenic | 40.0% | |
| ! | AAGGTATCCATCCATCCATA+GGG | + | tig0031784:31400-31419 | Msa1447540:intron | 40.0% |
| TTAAAATTCAGGCCTCCCTA+TGG | - | tig0031784:31418-31437 | None:intergenic | 40.0% | |
| AATGCAAAAGAACTGGCTGT+AGG | - | tig0031784:31703-31722 | None:intergenic | 40.0% | |
| TCAACCCCTACAAGAAAACA+TGG | + | tig0031784:31822-31841 | Msa1447540:intron | 40.0% | |
| ! | TGCACCATGTTTTCTTGTAG+GGG | - | tig0031784:31829-31848 | None:intergenic | 40.0% |
| ! | CTTGCACCATGTTTTCTTGT+AGG | - | tig0031784:31831-31850 | None:intergenic | 40.0% |
| ACATGGTGCAAGTCAATTTC+AGG | + | tig0031784:31839-31858 | Msa1447540:intron | 40.0% | |
| ! | TCAATTTCAGGCCTTGTACT+AGG | + | tig0031784:31851-31870 | Msa1447540:intron | 40.0% |
| GACTCAAAATTGGAGTTTGG+AGG | + | tig0031784:32075-32094 | Msa1447540:intron | 40.0% | |
| GCTTTCTGTTCGGGAAAAAT+CGG | + | tig0031784:32176-32195 | Msa1447540:intron | 40.0% | |
| ! | TCGGTGGCCGATTTAATAAT+CGG | + | tig0031784:32195-32214 | Msa1447540:intron | 40.0% |
| ! | TCGGCCACCGATTATTAAAT+CGG | - | tig0031784:32205-32224 | None:intergenic | 40.0% |
| !! | CTATTTTGAGAGAGATGAGG+GGG | + | tig0031784:32321-32340 | Msa1447540:intron | 40.0% |
| ! | GGTTTGAAGTGATTCACCTT+GGG | + | tig0031784:32407-32426 | Msa1447540:intron | 40.0% |
| TCACCTTGGGAAACACTATT+AGG | + | tig0031784:32420-32439 | Msa1447540:intron | 40.0% | |
| CATCCTAATAGTGTTTCCCA+AGG | - | tig0031784:32426-32445 | None:intergenic | 40.0% | |
| CACTATTAGGATGAGTCTCT+TGG | + | tig0031784:32433-32452 | Msa1447540:intron | 40.0% | |
| TAGGATGAGTCTCTTGGTTA+CGG | + | tig0031784:32439-32458 | Msa1447540:intron | 40.0% | |
| AACTGGGATTTGGGTAGAAT+AGG | + | tig0031784:32464-32483 | Msa1447540:intron | 40.0% | |
| GAGTAACGTTACCAAAGAGA+TGG | - | tig0031784:32510-32529 | None:intergenic | 40.0% | |
| ! | TTACTCATATAGTGGAACGG+AGG | + | tig0031784:32524-32543 | Msa1447540:intron | 40.0% |
| ! | TACTCATATAGTGGAACGGA+GGG | + | tig0031784:32525-32544 | Msa1447540:intron | 40.0% |
| TCTCTCAGACTAGGTCAATT+TGG | + | tig0031784:32554-32573 | Msa1447540:intron | 40.0% | |
| ACATTGACACCTGCTTATCT+TGG | + | tig0031784:32826-32845 | Msa1447540:intron | 40.0% | |
| ATGATCCATCCAAGATAAGC+AGG | - | tig0031784:32838-32857 | None:intergenic | 40.0% | |
| ATATGTAGCACGTTCCCTAT+TGG | - | tig0031784:33216-33235 | None:intergenic | 40.0% | |
| GGATGCACATGGATATTATG+TGG | - | tig0031784:33362-33381 | None:intergenic | 40.0% | |
| GAGTGAGGATTACTCAATTG+AGG | - | tig0031784:33481-33500 | None:intergenic | 40.0% | |
| CTCTAAATTCTCTTGGGGTA+AGG | - | tig0031784:33904-33923 | None:intergenic | 40.0% | |
| AAGAACTTCAACTTGCCATG+TGG | + | tig0031784:34267-34286 | Msa1447540:intron | 40.0% | |
| AGAACTTCAACTTGCCATGT+GGG | + | tig0031784:34268-34287 | Msa1447540:intron | 40.0% | |
| ! | GTGAATCTTGAGCCTTTTGT+GGG | - | tig0031784:34335-34354 | None:intergenic | 40.0% |
| ! | AGTGAATCTTGAGCCTTTTG+TGG | - | tig0031784:34336-34355 | None:intergenic | 40.0% |
| CTACCTCCTTAGAACACAAA+AGG | + | tig0031784:34380-34399 | Msa1447540:intron | 40.0% | |
| !!! | AGTCCTTTTGTGTTCTAAGG+AGG | - | tig0031784:34386-34405 | None:intergenic | 40.0% |
| ACACAAAGAGTCCAAGAACA+TGG | + | tig0031784:34796-34815 | Msa1447540:CDS | 40.0% | |
| TACCCCTGTAAGACTTAGAT+GGG | + | tig0031784:34823-34842 | Msa1447540:intron | 40.0% | |
| AACCCATCTAAGTCTTACAG+GGG | - | tig0031784:34828-34847 | None:intergenic | 40.0% | |
| GAAACCCATCTAAGTCTTAC+AGG | - | tig0031784:34830-34849 | None:intergenic | 40.0% | |
| GCTCAAATTCTTCAAGTAGG+TGG | + | tig0031784:35027-35046 | Msa1447540:CDS | 40.0% | |
| AATTCTTCAAGTAGGTGGAG+TGG | + | tig0031784:35032-35051 | Msa1447540:CDS | 40.0% | |
| ! | CCTTTTCATTGGAGATGAAG+AGG | - | tig0031784:30759-30778 | None:intergenic | 40.0% |
| CCTCTTCATCTCCAATGAAA+AGG | + | tig0031784:30756-30775 | Msa1447540:CDS | 40.0% | |
| TATTGTTCTCTCACTGCAGA+AGG | - | tig0031784:30785-30804 | None:intergenic | 40.0% | |
| ATCAGAAAGGTCAAATGCGT+AGG | + | tig0031784:30815-30834 | Msa1447540:CDS | 40.0% | |
| !!! | GCCTATTTTGAGGTCAATGA+AGG | + | tig0031784:35853-35872 | Msa1447540:three_prime_UTR | 40.0% |
| CCCTTCATTGACCTCAAAAT+AGG | - | tig0031784:35857-35876 | None:intergenic | 40.0% | |
| !! | AAGGGTACTCACCATGTTCT+TGG | - | tig0031784:30457-30476 | None:intergenic | 45.0% |
| GTGAGTACCCTTGTAAGACT+TGG | + | tig0031784:30465-30484 | Msa1447540:intron | 45.0% | |
| ! | GTACCCTTGTAAGACTTGGT+TGG | + | tig0031784:30469-30488 | Msa1447540:intron | 45.0% |
| TTAGTGTGACAGAAGGGGAA+AGG | + | tig0031784:30677-30696 | Msa1447540:CDS | 45.0% | |
| TGTTATCTCTCCACCACATC+TGG | + | tig0031784:30718-30737 | Msa1447540:CDS | 45.0% | |
| ATGAAGAGGAGACCAGATAG+AGG | - | tig0031784:30745-30764 | None:intergenic | 45.0% | |
| ! | GCAGAAGGCAACCTTTTCAT+TGG | - | tig0031784:30770-30789 | None:intergenic | 45.0% |
| AATGCGTAGGATCCGCTATA+AGG | + | tig0031784:30828-30847 | Msa1447540:CDS | 45.0% | |
| TCATTAACAGCCACTGCTTG+GGG | - | tig0031784:31362-31381 | None:intergenic | 45.0% | |
| GTCATTAACAGCCACTGCTT+GGG | - | tig0031784:31363-31382 | None:intergenic | 45.0% | |
| TGTCATTAACAGCCACTGCT+TGG | - | tig0031784:31364-31383 | None:intergenic | 45.0% | |
| AGCAGTGGCTGTTAATGACA+AGG | + | tig0031784:31364-31383 | Msa1447540:intron | 45.0% | |
| ACAAGGACCATACTGGTAGA+AGG | + | tig0031784:31381-31400 | Msa1447540:intron | 45.0% | |
| !! | GAAGGTATCCATCCATCCAT+AGG | + | tig0031784:31399-31418 | Msa1447540:intron | 45.0% |
| AAGAACTGGCTGTAGGTGAA+GGG | - | tig0031784:31696-31715 | None:intergenic | 45.0% | |
| AAAGAACTGGCTGTAGGTGA+AGG | - | tig0031784:31697-31716 | None:intergenic | 45.0% | |
| !! | TCTTGTAGGGGTTGATTTGG+TGG | - | tig0031784:31817-31836 | None:intergenic | 45.0% |
| AGTACAATCGTTGGCCGATT+TGG | + | tig0031784:32119-32138 | Msa1447540:intron | 45.0% | |
| !! | CGTTGGCCGATTTGGAAAAT+CGG | + | tig0031784:32127-32146 | Msa1447540:intron | 45.0% |
| CTCCAAAAGGCAGCCAAAAT+CGG | - | tig0031784:32156-32175 | None:intergenic | 45.0% | |
| !! | CCTTTTGGAGGCTTTCTGTT+CGG | + | tig0031784:32166-32185 | Msa1447540:intron | 45.0% |
| !! | CTTTTGGAGGCTTTCTGTTC+GGG | + | tig0031784:32167-32186 | Msa1447540:intron | 45.0% |
| TTCTGTTCGGGAAAAATCGG+TGG | + | tig0031784:32179-32198 | Msa1447540:intron | 45.0% | |
| ! | GTGGCCGATTTAATAATCGG+TGG | + | tig0031784:32198-32217 | Msa1447540:intron | 45.0% |
| ! | GGGTTTGAAGTGATTCACCT+TGG | + | tig0031784:32406-32425 | Msa1447540:intron | 45.0% |
| AGGATGAGTCTCTTGGTTAC+GGG | + | tig0031784:32440-32459 | Msa1447540:intron | 45.0% | |
| TCTCTTGGTTACGGGAAACT+GGG | + | tig0031784:32448-32467 | Msa1447540:intron | 45.0% | |
| GTTACGGGAAACTGGGATTT+GGG | + | tig0031784:32455-32474 | Msa1447540:intron | 45.0% | |
| TGGGATTTGGGTAGAATAGG+CGG | + | tig0031784:32467-32486 | Msa1447540:intron | 45.0% | |
| TAGGTCAATTTGGACCGAAC+TGG | + | tig0031784:32564-32583 | Msa1447540:intron | 45.0% | |
| CAACTTGATGTGTGGAGCAA+GGG | - | tig0031784:32697-32716 | None:intergenic | 45.0% | |
| ACAACTTGATGTGTGGAGCA+AGG | - | tig0031784:32698-32717 | None:intergenic | 45.0% | |
| TGACACCTGCTTATCTTGGA+TGG | + | tig0031784:32830-32849 | Msa1447540:intron | 45.0% | |
| TGGTGTTCCCTAATGCCAAT+AGG | + | tig0031784:33198-33217 | Msa1447540:intron | 45.0% | |
| GGTGTTCCCTAATGCCAATA+GGG | + | tig0031784:33199-33218 | Msa1447540:intron | 45.0% | |
| CACGTTCCCTATTGGCATTA+GGG | - | tig0031784:33208-33227 | None:intergenic | 45.0% | |
| AGCACCATATTGGATGCACA+TGG | - | tig0031784:33373-33392 | None:intergenic | 45.0% | |
| TTGCAGCAGTAGCACCATAT+TGG | - | tig0031784:33383-33402 | None:intergenic | 45.0% | |
| TGAGAGTGGGTAGCAACAAA+TGG | + | tig0031784:33407-33426 | Msa1447540:intron | 45.0% | |
| GAGAGTGGGTAGCAACAAAT+GGG | + | tig0031784:33408-33427 | Msa1447540:intron | 45.0% | |
| TGAGGGACTGCATCTTGAAA+TGG | - | tig0031784:33463-33482 | None:intergenic | 45.0% | |
| TAGTGTATAGGGCCTGTTGT+CGG | - | tig0031784:34074-34093 | None:intergenic | 45.0% | |
| ACAACAGGCCCTATACACTA+CGG | + | tig0031784:34074-34093 | Msa1447540:intron | 45.0% | |
| GGATGACTCAACCATGATCT+TGG | - | tig0031784:34314-34333 | None:intergenic | 45.0% | |
| TGGTTGAGTCATCCCACAAA+AGG | + | tig0031784:34320-34339 | Msa1447540:intron | 45.0% | |
| GACTAGCACTAGGTTAAGAG+AGG | - | tig0031784:34457-34476 | None:intergenic | 45.0% | |
| !! | CCTTTGCTTTGGTGTTTGGT+TGG | - | tig0031784:34630-34649 | None:intergenic | 45.0% |
| CCAACCAAACACCAAAGCAA+AGG | + | tig0031784:34627-34646 | Msa1447540:intron | 45.0% | |
| AATTCCAACCAGCAAAAGCG+CGG | + | tig0031784:34754-34773 | Msa1447540:CDS | 45.0% | |
| GTACCCCTGTAAGACTTAGA+TGG | + | tig0031784:34822-34841 | Msa1447540:intron | 45.0% | |
| TGCTCAAGTCAACTAGCAAG+TGG | - | tig0031784:34919-34938 | None:intergenic | 45.0% | |
| GGGGCTCAAATTCTTCAAGT+AGG | + | tig0031784:35024-35043 | Msa1447540:CDS | 45.0% | |
| TTAGTGTGAGAGAAGGAGAG+AGG | + | tig0031784:35076-35095 | Msa1447540:CDS | 45.0% | |
| TGTTATCTCTCCACCACATC+CGG | + | tig0031784:30718-30737 | Msa1447540:CDS | 45.0% | |
| ! | GCAGAAGGCAACCTTTTCAT+TGG | - | tig0031784:30770-30789 | None:intergenic | 45.0% |
| !! | CTTTGAAATGAGGGACTTCG+TGG | + | tig0031784:35606-35625 | Msa1447540:three_prime_UTR | 45.0% |
| CATTCATCGACAGAGAAGAG+AGG | + | tig0031784:35831-35850 | Msa1447540:three_prime_UTR | 45.0% | |
| ! | GAGAAGAGAGGCCTATTTTG+AGG | + | tig0031784:35843-35862 | Msa1447540:three_prime_UTR | 45.0% |
| !!! | AATTTTATTAAATATTTGAA+TGG | - | tig0031784:31561-31580 | None:intergenic | 5.0% |
| !! | TAGATTTAATTAATTAATAA+TGG | + | tig0031784:31948-31967 | Msa1447540:intron | 5.0% |
| AGATAGAGGACCAGATGTGG+TGG | - | tig0031784:30731-30750 | None:intergenic | 50.0% | |
| ACCACATCTGGTCCTCTATC+TGG | + | tig0031784:30730-30749 | Msa1447540:CDS | 50.0% | |
| ACCAGATAGAGGACCAGATG+TGG | - | tig0031784:30734-30753 | None:intergenic | 50.0% | |
| !! | GATGAGGTGTTTTGTCCACG+AGG | - | tig0031784:31236-31255 | None:intergenic | 50.0% |
| TGCTTTGTAACCCCAAGCAG+TGG | + | tig0031784:31349-31368 | Msa1447540:intron | 50.0% | |
| GTATCCATCCATCCATAGGG+AGG | + | tig0031784:31403-31422 | Msa1447540:intron | 50.0% | |
| AATTCAGGCCTCCCTATGGA+TGG | - | tig0031784:31414-31433 | None:intergenic | 50.0% | |
| !! | TGGCCGATTTGGAAAATCGG+TGG | + | tig0031784:32130-32149 | Msa1447540:intron | 50.0% |
| !!! | CGGCCACCGATTTTCCAAAT+CGG | - | tig0031784:32136-32155 | None:intergenic | 50.0% |
| !! | GGAAAATCGGTGGCCGATTT+TGG | + | tig0031784:32140-32159 | Msa1447540:intron | 50.0% |
| !!! | CGATTTTGGCTGCCTTTTGG+AGG | + | tig0031784:32154-32173 | Msa1447540:intron | 50.0% |
| CCGAACAGAAAGCCTCCAAA+AGG | - | tig0031784:32169-32188 | None:intergenic | 50.0% | |
| AGATGAGGGGGCTGAACAAA+GGG | + | tig0031784:32333-32352 | Msa1447540:intron | 50.0% | |
| GTCTCTTGGTTACGGGAAAC+TGG | + | tig0031784:32447-32466 | Msa1447540:intron | 50.0% | |
| GGTTACGGGAAACTGGGATT+TGG | + | tig0031784:32454-32473 | Msa1447540:intron | 50.0% | |
| GGGATTTGGGTAGAATAGGC+GGG | + | tig0031784:32468-32487 | Msa1447540:intron | 50.0% | |
| GCACGTTCCCTATTGGCATT+AGG | - | tig0031784:33209-33228 | None:intergenic | 50.0% | |
| ACTGCTGCAACTTGTGAGAG+TGG | + | tig0031784:33393-33412 | Msa1447540:intron | 50.0% | |
| CTGCTGCAACTTGTGAGAGT+GGG | + | tig0031784:33394-33413 | Msa1447540:intron | 50.0% | |
| GGTGCATTTCTCCAAAGGGT+TGG | + | tig0031784:34048-34067 | Msa1447540:intron | 50.0% | |
| ! | GGAATGCTCTGAGCTACTAG+AGG | - | tig0031784:34436-34455 | None:intergenic | 50.0% |
| !! | AGGGGTACTCACCATGTTCT+TGG | - | tig0031784:34810-34829 | None:intergenic | 50.0% |
| ATGAAGAGGAGACCAGCTAG+AGG | - | tig0031784:35144-35163 | None:intergenic | 50.0% | |
| !! | CTAACCAGGAAAAGCGCTGC+AGG | + | tig0031784:30405-30424 | Msa1447540:CDS | 55.0% |
| !! | CTTTGAAACGAGGGACCTCG+TGG | + | tig0031784:31218-31237 | Msa1447540:intron | 55.0% |
| !!! | GGCCGATTTTGGCTGCCTTT+TGG | + | tig0031784:32151-32170 | Msa1447540:intron | 55.0% |
| GAGATGAGGGGGCTGAACAA+AGG | + | tig0031784:32332-32351 | Msa1447540:intron | 55.0% | |
| CCAAACACATGTGACCGACG+CGG | + | tig0031784:33164-33183 | Msa1447540:intron | 55.0% | |
| CCAATAGCAAGTGACCGCGT+CGG | - | tig0031784:33181-33200 | None:intergenic | 55.0% | |
| ! | CCTTCCTGCAGCGCTTTTCC+TGG | - | tig0031784:30412-30431 | None:intergenic | 60.0% |
| !! | CCAGGAAAAGCGCTGCAGGA+AGG | + | tig0031784:30409-30428 | Msa1447540:CDS | 60.0% |
| CAGGCCTCCCTATGGATGGA+TGG | - | tig0031784:31410-31429 | None:intergenic | 60.0% | |
| GGGCTGCTCTCTCTCAGACT+AGG | + | tig0031784:32545-32564 | Msa1447540:intron | 60.0% | |
| ! | CCGCGTCGGTCACATGTGTT+TGG | - | tig0031784:33167-33186 | None:intergenic | 60.0% |
| !! | CCGACGCGGTCACTTGCTAT+TGG | + | tig0031784:33178-33197 | Msa1447540:intron | 60.0% |
| CCTGTTGTCGGCCAACCCTT+TGG | - | tig0031784:34062-34081 | None:intergenic | 60.0% | |
| !! | CCAAAGGGTTGGCCGACAAC+AGG | + | tig0031784:34059-34078 | Msa1447540:intron | 60.0% |
| ! | TCTGCCGCGCTTTTGCTGGT+TGG | - | tig0031784:34761-34780 | None:intergenic | 60.0% |
| ! | CTGTTCTGCCGCGCTTTTGC+TGG | - | tig0031784:34765-34784 | None:intergenic | 60.0% |
| AGCTAGAGGACCGGATGTGG+TGG | - | tig0031784:35130-35149 | None:intergenic | 60.0% | |
| ACCACATCCGGTCCTCTAGC+TGG | + | tig0031784:35129-35148 | Msa1447540:CDS | 60.0% | |
| ACCAGCTAGAGGACCGGATG+TGG | - | tig0031784:35133-35152 | None:intergenic | 60.0% | |
| GAGGAGACCAGCTAGAGGAC+CGG | - | tig0031784:35139-35158 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0031784 | gene | 30007 | 35936 | 30007 | ID=Msa1447540;Name=Msa1447540 |
| tig0031784 | mRNA | 30007 | 35936 | 30007 | ID=Msa1447540-mRNA-1;Parent=Msa1447540;Name=Msa1447540-mRNA-1;_AED=0.24;_eAED=0.24;_QI=152|0.85|0.75|1|0.85|0.75|8|367|377 |
| tig0031784 | exon | 30007 | 30303 | 30007 | ID=Msa1447540-mRNA-1:exon:15949;Parent=Msa1447540-mRNA-1 |
| tig0031784 | exon | 30393 | 30464 | 30393 | ID=Msa1447540-mRNA-1:exon:15950;Parent=Msa1447540-mRNA-1 |
| tig0031784 | exon | 30575 | 30849 | 30575 | ID=Msa1447540-mRNA-1:exon:15951;Parent=Msa1447540-mRNA-1 |
| tig0031784 | exon | 30931 | 30998 | 30931 | ID=Msa1447540-mRNA-1:exon:15952;Parent=Msa1447540-mRNA-1 |
| tig0031784 | exon | 34729 | 34817 | 34729 | ID=Msa1447540-mRNA-1:exon:15953;Parent=Msa1447540-mRNA-1 |
| tig0031784 | exon | 34974 | 35248 | 34974 | ID=Msa1447540-mRNA-1:exon:15954;Parent=Msa1447540-mRNA-1 |
| tig0031784 | exon | 35330 | 35653 | 35330 | ID=Msa1447540-mRNA-1:exon:15955;Parent=Msa1447540-mRNA-1 |
| tig0031784 | exon | 35684 | 35936 | 35684 | ID=Msa1447540-mRNA-1:exon:15956;Parent=Msa1447540-mRNA-1 |
| tig0031784 | five_prime_UTR | 30007 | 30158 | 30007 | ID=Msa1447540-mRNA-1:five_prime_utr;Parent=Msa1447540-mRNA-1 |
| tig0031784 | CDS | 30159 | 30303 | 30159 | ID=Msa1447540-mRNA-1:cds;Parent=Msa1447540-mRNA-1 |
| tig0031784 | CDS | 30393 | 30464 | 30393 | ID=Msa1447540-mRNA-1:cds;Parent=Msa1447540-mRNA-1 |
| tig0031784 | CDS | 30575 | 30849 | 30575 | ID=Msa1447540-mRNA-1:cds;Parent=Msa1447540-mRNA-1 |
| tig0031784 | CDS | 30931 | 30998 | 30931 | ID=Msa1447540-mRNA-1:cds;Parent=Msa1447540-mRNA-1 |
| tig0031784 | CDS | 34729 | 34817 | 34729 | ID=Msa1447540-mRNA-1:cds;Parent=Msa1447540-mRNA-1 |
| tig0031784 | CDS | 34974 | 35248 | 34974 | ID=Msa1447540-mRNA-1:cds;Parent=Msa1447540-mRNA-1 |
| tig0031784 | CDS | 35330 | 35539 | 35330 | ID=Msa1447540-mRNA-1:cds;Parent=Msa1447540-mRNA-1 |
| tig0031784 | three_prime_UTR | 35540 | 35653 | 35540 | ID=Msa1447540-mRNA-1:three_prime_utr;Parent=Msa1447540-mRNA-1 |
| tig0031784 | three_prime_UTR | 35684 | 35936 | 35684 | ID=Msa1447540-mRNA-1:three_prime_utr;Parent=Msa1447540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
