Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1451940 | sp|Q923W1|TGS1_MOUSE | 53.125 | 192 | 69 | 4 | 498 | 685 | 636 | 810 | 7.50e-58 | 214 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1451940 | A0A396JQF6 | 90.401 | 698 | 47 | 4 | 1 | 695 | 1 | 681 | 0.0 | 1254 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0026710 | Msa1451940 | 0.836265 | 1.035511e-56 | -8.615850e-47 |
| Msa0052310 | Msa1451940 | 0.990626 | 1.552632e-183 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1451940 | MtrunA17_Chr1g0153291 | 90.401 | 698 | 47 | 4 | 1 | 695 | 1 | 681 | 0.0 | 1254 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1451940 | AT1G45231.2 | 56.538 | 260 | 92 | 2 | 462 | 721 | 290 | 528 | 5.75e-95 | 305 |
| Msa1451940 | AT1G30550.1 | 50.235 | 213 | 84 | 3 | 498 | 710 | 19 | 209 | 1.89e-69 | 227 |
| Msa1451940 | AT1G30550.2 | 47.619 | 231 | 99 | 3 | 480 | 710 | 19 | 227 | 5.50e-69 | 226 |
| Msa1451940 | AT1G30545.2 | 50.235 | 213 | 84 | 3 | 498 | 710 | 31 | 221 | 2.40e-68 | 224 |
| Msa1451940 | AT1G30545.1 | 46.087 | 115 | 56 | 2 | 596 | 710 | 2 | 110 | 1.51e-32 | 122 |
Find 188 sgRNAs with CRISPR-Local
Find 650 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGTCTCCCTCTTTCCTTTC+AGG | 0.117881 | tig0033638:+15943 | Msa1451940:CDS |
| ATACAGATTGTGAGACTATT+TGG | 0.181236 | tig0033638:+17606 | Msa1451940:CDS |
| TCAATTGATTGTGGTGAATT+TGG | 0.197179 | tig0033638:+17725 | Msa1451940:CDS |
| CGTCTTGGCACCAAAGTTAA+AGG | 0.213662 | tig0033638:+20396 | Msa1451940:CDS |
| AAATTCGGTGTTCAGGAAAA+TGG | 0.223587 | tig0033638:+24933 | Msa1451940:intron |
| TGGAGTCGCTGCTGGAAATT+TGG | 0.230378 | tig0033638:+18000 | Msa1451940:CDS |
| GTGTTATGGGATACTTTCTA+TGG | 0.231393 | tig0033638:+17758 | Msa1451940:CDS |
| TCAAATACTTGAGTCTTTCT+TGG | 0.262751 | tig0033638:+20177 | Msa1451940:CDS |
| TATAACCGATAAGATAGTTT+AGG | 0.272524 | tig0033638:-15363 | None:intergenic |
| TGTCACCAGCACCTGTTAAA+TGG | 0.276417 | tig0033638:-17514 | None:intergenic |
| CTACTCACCGTTGTGCAAAT+TGG | 0.278895 | tig0033638:-19057 | None:intergenic |
| TAGGCATGACATTGTTATAT+TGG | 0.292633 | tig0033638:+20154 | Msa1451940:intron |
| GAGCAAACAAATGAATGAAT+TGG | 0.294987 | tig0033638:+15922 | Msa1451940:CDS |
| TAAGATCAAAGTCACGGTTC+TGG | 0.303686 | tig0033638:-17451 | None:intergenic |
| TTGGAGATTGGATGGTGTTA+TGG | 0.306890 | tig0033638:+17744 | Msa1451940:CDS |
| AGAATCACTTCCCATGAGTT+TGG | 0.319721 | tig0033638:+17673 | Msa1451940:CDS |
| TGGTTGAAGTTGACATTTCT+TGG | 0.332160 | tig0033638:-22511 | None:intergenic |
| ATTGCACATGCCTCAGATAC+TGG | 0.337936 | tig0033638:+17476 | Msa1451940:CDS |
| TCAGATTTACTATCCAATTC+AGG | 0.343225 | tig0033638:-18396 | None:intergenic |
| TCGTCTACCAAGGTTTCTTC+AGG | 0.344527 | tig0033638:-17935 | None:intergenic |
| AGGGCTGATGAAGGTTAATA+AGG | 0.354816 | tig0033638:-15343 | None:intergenic |
| ATAACCGATAAGATAGTTTA+GGG | 0.358427 | tig0033638:-15362 | None:intergenic |
| TCAGCCCTAAACTATCTTAT+CGG | 0.360963 | tig0033638:+15358 | Msa1451940:five_prime_UTR |
| AACTTTAGCACCTTTAACTT+TGG | 0.367248 | tig0033638:-20406 | None:intergenic |
| TGTCTTCCTATCTCCACCTT+GGG | 0.368653 | tig0033638:+21704 | Msa1451940:CDS |
| TCATTTAGAGTTTCATCAAC+AGG | 0.375630 | tig0033638:-17191 | None:intergenic |
| TAGAAATGTGGACCAGTAAA+AGG | 0.376722 | tig0033638:+17122 | Msa1451940:intron |
| ATTGTTGCAGAATAAGCTTC+AGG | 0.377435 | tig0033638:-18860 | None:intergenic |
| GGTAATTGATACGCCTGAAT+TGG | 0.379166 | tig0033638:+18383 | Msa1451940:CDS |
| GGCGGCAATGTTTGCTTGGT+TGG | 0.381307 | tig0033638:+24981 | Msa1451940:CDS |
| TGGAGATTGGATGGTGTTAT+GGG | 0.383342 | tig0033638:+17745 | Msa1451940:CDS |
| TGAAGCTCTAAAGTCATTAG+AGG | 0.391197 | tig0033638:+17883 | Msa1451940:CDS |
| AAGATCAAAGTCACGGTTCT+GGG | 0.395925 | tig0033638:-17450 | None:intergenic |
| ATTATCTTGTATATCAATGC+TGG | 0.397234 | tig0033638:+17271 | Msa1451940:CDS |
| GCCGGAGACCGTAGTCAATA+TGG | 0.402820 | tig0033638:+15466 | Msa1451940:exon |
| GTCGCAACCTTGGCATAATC+TGG | 0.408300 | tig0033638:-21732 | None:intergenic |
| GCTGAGATTGGAGTCGCTGC+TGG | 0.424048 | tig0033638:+17992 | Msa1451940:CDS |
| CAAGGTTTGTGGGATAGAAC+TGG | 0.427058 | tig0033638:+17535 | Msa1451940:CDS |
| GATCAAATTGACTTCATAGT+TGG | 0.427835 | tig0033638:+20364 | Msa1451940:CDS |
| AGCAAACAAATGAATGAATT+GGG | 0.428976 | tig0033638:+15923 | Msa1451940:CDS |
| AATACCTAACGACGTGATCC+AGG | 0.429384 | tig0033638:-18132 | None:intergenic |
| ATCAATTAGCGAATCAATGA+AGG | 0.432023 | tig0033638:-25056 | None:intergenic |
| TAAAAGAAAGCGGCGCGCTC+CGG | 0.433840 | tig0033638:+15430 | Msa1451940:five_prime_UTR |
| TCTGCTGGAAGCCATTTAAC+AGG | 0.439865 | tig0033638:+17503 | Msa1451940:CDS |
| TATACTATTAATCCTTTCCT+CGG | 0.441008 | tig0033638:-17405 | None:intergenic |
| CTTCGGAAGATGGTTGAACT+TGG | 0.443338 | tig0033638:-15710 | None:intergenic |
| GCCATATTGACTACGGTCTC+CGG | 0.443709 | tig0033638:-15467 | None:intergenic |
| TTGGTAGACGAGAACTTATC+AGG | 0.445848 | tig0033638:+17947 | Msa1451940:CDS |
| TGCTGCACTGGGTTTGCTAA+TGG | 0.446709 | tig0033638:+17377 | Msa1451940:CDS |
| GATTCATCAAACCTCATTCC+TGG | 0.447006 | tig0033638:+15753 | Msa1451940:CDS |
| ATTGTGGTGAATTTGGAGAT+TGG | 0.448835 | tig0033638:+17732 | Msa1451940:CDS |
| ATGTCACCCAAGTCTTTCTC+TGG | 0.455587 | tig0033638:+15546 | Msa1451940:CDS |
| GACTGTTTCACCGGCGCTGG+TGG | 0.456267 | tig0033638:+19025 | Msa1451940:CDS |
| TCTACATGGGACCCACCCTC+AGG | 0.459782 | tig0033638:+17815 | Msa1451940:CDS |
| GTTGCATATGACAGAGTTGA+TGG | 0.460248 | tig0033638:+17701 | Msa1451940:CDS |
| AGTGATTCTGATTCGTTAGC+TGG | 0.461287 | tig0033638:-17659 | None:intergenic |
| AAATGTCAACTTCAACCAAT+TGG | 0.461325 | tig0033638:+22516 | Msa1451940:CDS |
| GGGATGGAGTATCTAGCATT+TGG | 0.461901 | tig0033638:+17836 | Msa1451940:CDS |
| GAAGAGTATTCAGCTGAGAT+TGG | 0.463111 | tig0033638:+17980 | Msa1451940:CDS |
| GATAATTCAACATGCTGCAC+TGG | 0.465684 | tig0033638:+17365 | Msa1451940:CDS |
| CTTTGGCGGCAATGTTTGCT+TGG | 0.467714 | tig0033638:+24977 | Msa1451940:CDS |
| TCCGGCTACCTCTCTCAAAC+CGG | 0.469747 | tig0033638:-15449 | None:intergenic |
| TTGTGATCAGCTTCGGAAGA+TGG | 0.482811 | tig0033638:-15720 | None:intergenic |
| TTCTTTGCCTGAAAGGAAAG+AGG | 0.484021 | tig0033638:-15950 | None:intergenic |
| TGATAATGTGCAATAATCTC+TGG | 0.484400 | tig0033638:-18971 | None:intergenic |
| ACTTGAGTCTTTCTTGGAGA+AGG | 0.486119 | tig0033638:+20183 | Msa1451940:CDS |
| ATACCCTGGATCACGTCGTT+AGG | 0.486600 | tig0033638:+18128 | Msa1451940:CDS |
| TTATTCTCTAGATTTGATGA+TGG | 0.486790 | tig0033638:+18911 | Msa1451940:CDS |
| TCAGATACTGGAATCTCTGC+TGG | 0.487274 | tig0033638:+17488 | Msa1451940:CDS |
| AGTTGGTGACTTCTTCGTCT+TGG | 0.487348 | tig0033638:+20381 | Msa1451940:CDS |
| ACAGTAATTGACTGTTTCAC+CGG | 0.491412 | tig0033638:+19016 | Msa1451940:CDS |
| ATATTGCAGCAGGGATACTT+TGG | 0.492621 | tig0033638:+24960 | Msa1451940:CDS |
| TGCAACCCCTTCCAAACTCA+TGG | 0.493145 | tig0033638:-17684 | None:intergenic |
| GTCCACCCCAAGGTGGAGAT+AGG | 0.493310 | tig0033638:-21710 | None:intergenic |
| TTTGCTCAATTCCAAATCCT+CGG | 0.493464 | tig0033638:-15906 | None:intergenic |
| ATTGTTGTTGTGATCAGCTT+CGG | 0.497624 | tig0033638:-15727 | None:intergenic |
| AAATGGATGGATATTGCAGC+AGG | 0.500907 | tig0033638:+24950 | Msa1451940:CDS |
| TTCCTTTCAGGCAAAGAATG+AGG | 0.501644 | tig0033638:+15955 | Msa1451940:CDS |
| TACCTCATTCTTTGCCTGAA+AGG | 0.504941 | tig0033638:-15957 | None:intergenic |
| TACTCTGTTCAGTGTTGCTA+AGG | 0.505931 | tig0033638:+22459 | Msa1451940:CDS |
| CATCTGAATGATGAAGAGAT+TGG | 0.506548 | tig0033638:-18051 | None:intergenic |
| ATTGACTGTTTCACCGGCGC+TGG | 0.506856 | tig0033638:+19022 | Msa1451940:CDS |
| ATAGAGATAACTCTGCCAAT+TGG | 0.508750 | tig0033638:-22531 | None:intergenic |
| CTGTCTTCCTATCTCCACCT+TGG | 0.509970 | tig0033638:+21703 | Msa1451940:CDS |
| CTAATGGTGTTTCCGAGGAA+AGG | 0.515247 | tig0033638:+17393 | Msa1451940:CDS |
| TGAAGTTGACATTTCTTGGA+AGG | 0.517744 | tig0033638:-22507 | None:intergenic |
| CACTTCCCATGAGTTTGGAA+GGG | 0.519103 | tig0033638:+17678 | Msa1451940:CDS |
| CTAGCATAATCAATCTTCAA+TGG | 0.520724 | tig0033638:-20313 | None:intergenic |
| TGAGAAGATTCAATCCAGTC+TGG | 0.523383 | tig0033638:-25020 | None:intergenic |
| AGATAGTTTAGGGCTGATGA+AGG | 0.527378 | tig0033638:-15352 | None:intergenic |
| TGGAAGGAACATGACAACTC+TGG | 0.528426 | tig0033638:-22491 | None:intergenic |
| TTATCTTGTATATCAATGCT+GGG | 0.528772 | tig0033638:+17272 | Msa1451940:CDS |
| TTGCTCAATTCCAAATCCTC+GGG | 0.531412 | tig0033638:-15905 | None:intergenic |
| GCTGCAAGTACGTGGCTGCT+TGG | 0.531513 | tig0033638:-17165 | None:intergenic |
| TTCCTATCTCCACCTTGGGG+TGG | 0.532270 | tig0033638:+21708 | Msa1451940:CDS |
| AGATACTCCATCCCTGAGGG+TGG | 0.532294 | tig0033638:-17827 | None:intergenic |
| TTGCAGCAGGGATACTTTGG+CGG | 0.533591 | tig0033638:+24963 | Msa1451940:CDS |
| TCACTTCCCATGAGTTTGGA+AGG | 0.534280 | tig0033638:+17677 | Msa1451940:CDS |
| ACTTCCCATGAGTTTGGAAG+GGG | 0.538055 | tig0033638:+17679 | Msa1451940:CDS |
| CACAGTAGGATGATTCACTT+TGG | 0.539774 | tig0033638:-17295 | None:intergenic |
| GGAAGCCATTTAACAGGTGC+TGG | 0.541054 | tig0033638:+17509 | Msa1451940:CDS |
| TCAAAACAGACACTTCTACA+TGG | 0.541812 | tig0033638:+17801 | Msa1451940:CDS |
| ACTGTTTCACCGGCGCTGGT+GGG | 0.542352 | tig0033638:+19026 | Msa1451940:CDS |
| TGGTGAATTTGGAGATTGGA+TGG | 0.548165 | tig0033638:+17736 | Msa1451940:CDS |
| TGGAGTATCTAGCATTTGGT+GGG | 0.549362 | tig0033638:+17840 | Msa1451940:CDS |
| ATGGAGTATCTAGCATTTGG+TGG | 0.551877 | tig0033638:+17839 | Msa1451940:CDS |
| GACATGGCTCAATCTGTCCC+TGG | 0.553310 | tig0033638:+17335 | Msa1451940:CDS |
| GCTAGATTTATAAAAGAAAG+CGG | 0.553632 | tig0033638:+15420 | Msa1451940:five_prime_UTR |
| CAATGCTTAGACCGCATGAT+GGG | 0.554402 | tig0033638:+21769 | Msa1451940:CDS |
| CTCAAGTGCTAGAACCAGAC+TGG | 0.555040 | tig0033638:+25006 | Msa1451940:CDS |
| AATAGCGGCGCCTTCATAGT+CGG | 0.558541 | tig0033638:-15501 | None:intergenic |
| AGAAGCACTCGCCAGGAATG+AGG | 0.559235 | tig0033638:-15764 | None:intergenic |
| TATCAAGCATCACGTTGTGC+AGG | 0.561730 | tig0033638:+18989 | Msa1451940:CDS |
| ATAATTCAACATGCTGCACT+GGG | 0.561985 | tig0033638:+17366 | Msa1451940:CDS |
| CAAACAACCTGAAGAAACCT+TGG | 0.563559 | tig0033638:+17928 | Msa1451940:CDS |
| CATTGAAGATTGATTATGCT+AGG | 0.564121 | tig0033638:+20314 | Msa1451940:CDS |
| GCTCAATCTGTCCCTGGTGA+AGG | 0.564856 | tig0033638:+17341 | Msa1451940:CDS |
| ACGACGATGGTGCTGCCACT+TGG | 0.565157 | tig0033638:+17630 | Msa1451940:CDS |
| GGTGCTGGTGACAAGGTTTG+TGG | 0.565223 | tig0033638:+17524 | Msa1451940:CDS |
| CATATCATAAGTCGCAACCT+TGG | 0.565614 | tig0033638:-21742 | None:intergenic |
| TTTAACAGGTGCTGGTGACA+AGG | 0.566075 | tig0033638:+17517 | Msa1451940:CDS |
| GATGGCATTCCCACCAGCGC+CGG | 0.573122 | tig0033638:-19035 | None:intergenic |
| CTCTATCTGCCTCTCCACCA+TGG | 0.573558 | tig0033638:+22548 | Msa1451940:CDS |
| GGCGCCGCTATTCAATCTCT+CGG | 0.575015 | tig0033638:+15512 | Msa1451940:CDS |
| GTGCTGGTGACAAGGTTTGT+GGG | 0.579936 | tig0033638:+17525 | Msa1451940:CDS |
| CATTTAGAGTTTCATCAACA+GGG | 0.579943 | tig0033638:-17190 | None:intergenic |
| GATGAAGGTTAATAAGGAGT+AGG | 0.580853 | tig0033638:-15337 | None:intergenic |
| CTGTTCTGTATCAAATACCC+TGG | 0.582745 | tig0033638:+18114 | Msa1451940:CDS |
| GTTGAATTATCTCCTTCACC+AGG | 0.585632 | tig0033638:-17353 | None:intergenic |
| TCTTTGCCTGAAAGGAAAGA+GGG | 0.587850 | tig0033638:-15949 | None:intergenic |
| ATGGGACCCACCCTCAGGGA+TGG | 0.588910 | tig0033638:+17820 | Msa1451940:CDS |
| CAAAACAGACACTTCTACAT+GGG | 0.589849 | tig0033638:+17802 | Msa1451940:CDS |
| GATACTCCATCCCTGAGGGT+GGG | 0.590428 | tig0033638:-17826 | None:intergenic |
| TCGGTGTTCAGGAAAATGGA+TGG | 0.591426 | tig0033638:+24937 | Msa1451940:intron |
| CTCTAGCGACCATGGTGGAG+AGG | 0.591857 | tig0033638:-22557 | None:intergenic |
| CTCTCCACCATGGTCGCTAG+AGG | 0.592850 | tig0033638:+22558 | Msa1451940:CDS |
| TGTTATGGGATACTTTCTAT+GGG | 0.593869 | tig0033638:+17759 | Msa1451940:CDS |
| GCATAATCTGGTCCACCCCA+AGG | 0.596449 | tig0033638:-21720 | None:intergenic |
| TCATACACCAACGGAAAACA+TGG | 0.596879 | tig0033638:+18362 | Msa1451940:CDS |
| CAAGCATCACGTTGTGCAGG+TGG | 0.596897 | tig0033638:+18992 | Msa1451940:CDS |
| GAAATTACCTCTAGCGACCA+TGG | 0.600107 | tig0033638:-22565 | None:intergenic |
| TAGTTACCAGAGAAAGACTT+GGG | 0.602158 | tig0033638:-15552 | None:intergenic |
| TCACCGTTGTGCAAATTGGA+TGG | 0.602384 | tig0033638:-19053 | None:intergenic |
| ATACCTAACGACGTGATCCA+GGG | 0.603439 | tig0033638:-18131 | None:intergenic |
| AAATGAAGTGAGTGCAGAGG+AGG | 0.606828 | tig0033638:+17208 | Msa1451940:CDS |
| AGCAGAGATTCCAGTATCTG+AGG | 0.607282 | tig0033638:-17486 | None:intergenic |
| GCTAGATACTCCATCCCTGA+GGG | 0.607652 | tig0033638:-17830 | None:intergenic |
| TCCGGTTTGAGAGAGGTAGC+CGG | 0.608768 | tig0033638:+15448 | Msa1451940:five_prime_UTR |
| ATCCTACTGTGATGGTGCAG+CGG | 0.609489 | tig0033638:+17307 | Msa1451940:CDS |
| ATCACCGACTCCGACTATGA+AGG | 0.610202 | tig0033638:+15491 | Msa1451940:CDS |
| ACAATGCTTAGACCGCATGA+TGG | 0.611631 | tig0033638:+21768 | Msa1451940:CDS |
| GCAACCCCTTCCAAACTCAT+GGG | 0.614097 | tig0033638:-17683 | None:intergenic |
| TAATGCTGCTATTTATCGAG+TGG | 0.614197 | tig0033638:+20339 | Msa1451940:CDS |
| CTACATGGGACCCACCCTCA+GGG | 0.614401 | tig0033638:+17816 | Msa1451940:CDS |
| GTTTGCTAATGGTGTTTCCG+AGG | 0.615324 | tig0033638:+17388 | Msa1451940:CDS |
| TGATAAGTTCTCGTCTACCA+AGG | 0.615470 | tig0033638:-17945 | None:intergenic |
| GGCGCGCTCCGGTTTGAGAG+AGG | 0.616944 | tig0033638:+15441 | Msa1451940:five_prime_UTR |
| CTTGAGAGAACTAGTTGCAA+CGG | 0.617983 | tig0033638:+18079 | Msa1451940:CDS |
| TGGTGCAGCGGAAGTTGACA+TGG | 0.618529 | tig0033638:+17319 | Msa1451940:CDS |
| AAATTATATTATGAAACTGA+AGG | 0.620563 | tig0033638:+18471 | Msa1451940:CDS |
| TTAGTTACCAGAGAAAGACT+TGG | 0.620694 | tig0033638:-15553 | None:intergenic |
| GGCGCCTTCATAGTCGGAGT+CGG | 0.622083 | tig0033638:-15495 | None:intergenic |
| AGAAAGTGAAAAGAAAACAC+AGG | 0.628636 | tig0033638:+18442 | Msa1451940:CDS |
| TCTATCTTGTCATAGAAATG+TGG | 0.633490 | tig0033638:+17110 | Msa1451940:intron |
| GTCTTCCTATCTCCACCTTG+GGG | 0.634884 | tig0033638:+21705 | Msa1451940:CDS |
| AAGGTTTGTGGGATAGAACT+GGG | 0.636682 | tig0033638:+17536 | Msa1451940:CDS |
| TTGCATATGACAGAGTTGAT+GGG | 0.643851 | tig0033638:+17702 | Msa1451940:CDS |
| GGGTGGACCAGATTATGCCA+AGG | 0.644458 | tig0033638:+21725 | Msa1451940:CDS |
| ATGTTACAGGTGCAGACATG+TGG | 0.644573 | tig0033638:+20273 | Msa1451940:intron |
| ACAGGGTTGCTGCAAGTACG+TGG | 0.644966 | tig0033638:-17173 | None:intergenic |
| GTTGATGGGTCAATTGATTG+TGG | 0.650295 | tig0033638:+17716 | Msa1451940:CDS |
| TCTAAATGAAGTGAGTGCAG+AGG | 0.654427 | tig0033638:+17205 | Msa1451940:CDS |
| AGTGAATCATCCTACTGTGA+TGG | 0.656530 | tig0033638:+17299 | Msa1451940:CDS |
| TTGAATTATCTCCTTCACCA+GGG | 0.659466 | tig0033638:-17352 | None:intergenic |
| GGTGATCGCCATATTGACTA+CGG | 0.659564 | tig0033638:-15474 | None:intergenic |
| TTCCGCTGCACCATCACAGT+AGG | 0.666655 | tig0033638:-17309 | None:intergenic |
| ATGCAGTCAAGCAACATCAG+AGG | 0.667380 | tig0033638:+18335 | Msa1451940:CDS |
| TGCTAGATACTCCATCCCTG+AGG | 0.677604 | tig0033638:-17831 | None:intergenic |
| ATGCCATCCAATTTGCACAA+CGG | 0.679134 | tig0033638:+19050 | Msa1451940:CDS |
| AGAGGTCGATCATACACCAA+CGG | 0.685453 | tig0033638:+18353 | Msa1451940:CDS |
| AAGTGAAAAGAAAACACAGG+CGG | 0.687466 | tig0033638:+18445 | Msa1451940:CDS |
| TAATCTGGTCCACCCCAAGG+TGG | 0.694203 | tig0033638:-21717 | None:intergenic |
| GCATCTACCTACCCATCATG+CGG | 0.705552 | tig0033638:-21780 | None:intergenic |
| GTTAGCTGGCGACTGCCAAG+TGG | 0.706012 | tig0033638:-17645 | None:intergenic |
| AATGGATGGATATTGCAGCA+GGG | 0.709139 | tig0033638:+24951 | Msa1451940:CDS |
| GAGACTATTTGGAACGACGA+TGG | 0.720881 | tig0033638:+17617 | Msa1451940:CDS |
| ATTACCTCTAGCGACCATGG+TGG | 0.725531 | tig0033638:-22562 | None:intergenic |
| AGAACCGAGAGATTGAATAG+CGG | 0.727660 | tig0033638:-15516 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTTTTTTTTGTAGTTTT+TGG | + | tig0033638:19625-19644 | Msa1451940:intron | 10.0% |
| !!! | TTGATTCTTTTTTTTTTTTT+TGG | + | tig0033638:20223-20242 | Msa1451940:intron | 10.0% |
| !!! | TATTTTGGATTTTTAAAAAT+AGG | + | tig0033638:20449-20468 | Msa1451940:intron | 10.0% |
| !!! | TATATGAAACAATATTTTAT+TGG | + | tig0033638:20721-20740 | Msa1451940:intron | 10.0% |
| !!! | ATATGAAACAATATTTTATT+GGG | + | tig0033638:20722-20741 | Msa1451940:intron | 10.0% |
| !!! | AACTTATTATATGTTTTATA+TGG | + | tig0033638:23273-23292 | Msa1451940:intron | 10.0% |
| !! | TAATAATTATTTCCTTAATA+AGG | - | tig0033638:24243-24262 | None:intergenic | 10.0% |
| !!! | TGTTTTATATTTTTGTAGAT+TGG | + | tig0033638:15864-15883 | Msa1451940:intron | 15.0% |
| !!! | TACTTTTCTTTTTTAAACTA+CGG | + | tig0033638:16473-16492 | Msa1451940:intron | 15.0% |
| !! | TGTCTAAATTATTACTATAA+AGG | + | tig0033638:16743-16762 | Msa1451940:intron | 15.0% |
| !! | GTCTAAATTATTACTATAAA+GGG | + | tig0033638:16744-16763 | Msa1451940:intron | 15.0% |
| !! | TCTAAATTATTACTATAAAG+GGG | + | tig0033638:16745-16764 | Msa1451940:intron | 15.0% |
| !! | CTATTATAAAACTATAACTA+TGG | - | tig0033638:16971-16990 | None:intergenic | 15.0% |
| !! | AAATTATATTATGAAACTGA+AGG | + | tig0033638:18471-18490 | Msa1451940:CDS | 15.0% |
| !! | AGACCAAAAAAATTAATATT+CGG | + | tig0033638:19204-19223 | Msa1451940:intron | 15.0% |
| !!! | TAACCGAATATTAATTTTTT+TGG | - | tig0033638:19210-19229 | None:intergenic | 15.0% |
| !! | AACTACAAAAAAAAATTACA+GGG | - | tig0033638:19623-19642 | None:intergenic | 15.0% |
| !! | AAACTACAAAAAAAAATTAC+AGG | - | tig0033638:19624-19643 | None:intergenic | 15.0% |
| !! | GATTTATATGAAATGAATAT+TGG | - | tig0033638:20014-20033 | None:intergenic | 15.0% |
| !!! | TATGAAACAATATTTTATTG+GGG | + | tig0033638:20723-20742 | Msa1451940:intron | 15.0% |
| !!! | TTATTTCTCCTATTTATATA+TGG | - | tig0033638:20931-20950 | None:intergenic | 15.0% |
| !! | TTAAATTTAATTAGAAGAGT+GGG | - | tig0033638:21555-21574 | None:intergenic | 15.0% |
| !! | TTTAAATTTAATTAGAAGAG+TGG | - | tig0033638:21556-21575 | None:intergenic | 15.0% |
| !! | AATTAAATTTACTTGTACTT+TGG | + | tig0033638:22061-22080 | Msa1451940:intron | 15.0% |
| !! | ATTAAATTTACTTGTACTTT+GGG | + | tig0033638:22062-22081 | Msa1451940:intron | 15.0% |
| !! | ATGTAAACAAAAAATGTATT+TGG | + | tig0033638:22945-22964 | Msa1451940:intron | 15.0% |
| !! | TAAATAAATAATATGACAGA+TGG | - | tig0033638:23999-24018 | None:intergenic | 15.0% |
| !! | CTATAAAATGTATTTGAATA+GGG | - | tig0033638:24139-24158 | None:intergenic | 15.0% |
| !!! | AATTTCAAGTATTAATTTCT+TGG | - | tig0033638:24918-24937 | None:intergenic | 15.0% |
| !! | AGAAATTAATACTTGAAATT+CGG | + | tig0033638:24918-24937 | Msa1451940:intron | 15.0% |
| !! | TTCTCTGATTAATTAATGAA+AGG | + | tig0033638:15807-15826 | Msa1451940:intron | 20.0% |
| !!! | GATTAATTAATGAAAGGTTT+TGG | + | tig0033638:15813-15832 | Msa1451940:intron | 20.0% |
| !!! | AGTGTAATTTGTATAACTAT+AGG | - | tig0033638:15983-16002 | None:intergenic | 20.0% |
| !! | TTCTACTATATCATAATATC+AGG | - | tig0033638:16011-16030 | None:intergenic | 20.0% |
| !! | TTATGATATAGTAGAAAGTT+AGG | + | tig0033638:16015-16034 | Msa1451940:intron | 20.0% |
| !! | CTAAATTATTACTATAAAGG+GGG | + | tig0033638:16746-16765 | Msa1451940:intron | 20.0% |
| !! | ATAACCTGAAAACAATTTAT+AGG | + | tig0033638:16843-16862 | Msa1451940:intron | 20.0% |
| !! | TCTTATATATATAAAGAGCA+GGG | - | tig0033638:17054-17073 | None:intergenic | 20.0% |
| !! | ATCTTATATATATAAAGAGC+AGG | - | tig0033638:17055-17074 | None:intergenic | 20.0% |
| !!! | TGAGATCAATGTTTTTTTAT+TGG | + | tig0033638:18496-18515 | Msa1451940:intron | 20.0% |
| !!! | TAATGAATCTTTAAGTTAAC+TGG | + | tig0033638:18565-18584 | Msa1451940:intron | 20.0% |
| !!! | TGATAAATTCATCTTGTTTT+TGG | + | tig0033638:19108-19127 | Msa1451940:intron | 20.0% |
| !! | AGAAACAGTAAATATATTCT+TGG | + | tig0033638:19285-19304 | Msa1451940:intron | 20.0% |
| !! | GAAACAGTAAATATATTCTT+GGG | + | tig0033638:19286-19305 | Msa1451940:intron | 20.0% |
| !! | GTATACATCAATATTAAATC+CGG | - | tig0033638:19471-19490 | None:intergenic | 20.0% |
| !! | AATTAAATTTGCAAATTACC+AGG | - | tig0033638:19541-19560 | None:intergenic | 20.0% |
| !! | TGCAAATTTAATTCTCATAA+AGG | + | tig0033638:19548-19567 | Msa1451940:intron | 20.0% |
| !!! | TTCAAAAACAATATTTTGCA+GGG | - | tig0033638:19652-19671 | None:intergenic | 20.0% |
| !!! | TTTCAAAAACAATATTTTGC+AGG | - | tig0033638:19653-19672 | None:intergenic | 20.0% |
| !!! | CCAAAAACAAAATATTTTAC+AGG | - | tig0033638:19753-19772 | None:intergenic | 20.0% |
| !!! | CCTGTAAAATATTTTGTTTT+TGG | + | tig0033638:19750-19769 | Msa1451940:intron | 20.0% |
| !!! | CAAAAACAAAATATTTTGCA+GGG | - | tig0033638:19783-19802 | None:intergenic | 20.0% |
| !!! | TCAAAAACAAAATATTTTGC+AGG | - | tig0033638:19784-19803 | None:intergenic | 20.0% |
| !! | ATTTATAAGAGGCTAAAATA+TGG | - | tig0033638:19834-19853 | None:intergenic | 20.0% |
| !! | ACATATATAAACTAAAGACA+AGG | - | tig0033638:19958-19977 | None:intergenic | 20.0% |
| !! | ATTACTAGACTAAAATAAAG+TGG | - | tig0033638:19989-20008 | None:intergenic | 20.0% |
| !! | TTTAAGAGAGATAATAAACA+GGG | - | tig0033638:20650-20669 | None:intergenic | 20.0% |
| !!! | TTTTAAGAGAGATAATAAAC+AGG | - | tig0033638:20651-20670 | None:intergenic | 20.0% |
| !!! | ATGAAACAATATTTTATTGG+GGG | + | tig0033638:20724-20743 | Msa1451940:intron | 20.0% |
| !! | TTATGAACTTATGATTATTC+AGG | + | tig0033638:20881-20900 | Msa1451940:intron | 20.0% |
| !! | TATGAACTTATGATTATTCA+GGG | + | tig0033638:20882-20901 | Msa1451940:intron | 20.0% |
| !! | TAAATTTAATTAGAAGAGTG+GGG | - | tig0033638:21554-21573 | None:intergenic | 20.0% |
| !!! | GATCAACTATTTTTCTTAAA+GGG | - | tig0033638:21861-21880 | None:intergenic | 20.0% |
| !!! | AGATCAACTATTTTTCTTAA+AGG | - | tig0033638:21862-21881 | None:intergenic | 20.0% |
| !!! | CAATAACCATTTTATTCTTA+GGG | - | tig0033638:21977-21996 | None:intergenic | 20.0% |
| !!! | TCAATAACCATTTTATTCTT+AGG | - | tig0033638:21978-21997 | None:intergenic | 20.0% |
| !! | AAATTAAGACCTTAATTAGT+TGG | + | tig0033638:21998-22017 | Msa1451940:intron | 20.0% |
| !! | AACTAGAAGATAAAATCAAA+AGG | - | tig0033638:22143-22162 | None:intergenic | 20.0% |
| !! | TTCATATTCAAATGTTAAGA+GGG | - | tig0033638:22642-22661 | None:intergenic | 20.0% |
| !! | ATTCATATTCAAATGTTAAG+AGG | - | tig0033638:22643-22662 | None:intergenic | 20.0% |
| !! | TCAGAAATAAAGTGAAAATA+AGG | + | tig0033638:22899-22918 | Msa1451940:intron | 20.0% |
| !! | TATACAATAAAACTCTTAGT+AGG | - | tig0033638:23061-23080 | None:intergenic | 20.0% |
| !!! | TGATTTTATGTGAAGTATAT+TGG | + | tig0033638:23241-23260 | Msa1451940:intron | 20.0% |
| !!! | AGATTTTTAAGTTATTCTTC+TGG | + | tig0033638:23521-23540 | Msa1451940:intron | 20.0% |
| !!! | TTTCATTGATTACTGAAAAA+CGG | + | tig0033638:23636-23655 | Msa1451940:intron | 20.0% |
| !!! | TACTTTTAATTTCATGAATG+TGG | + | tig0033638:24097-24116 | Msa1451940:intron | 20.0% |
| !! | GCTATAAAATGTATTTGAAT+AGG | - | tig0033638:24140-24159 | None:intergenic | 20.0% |
| !! | TGAAAGTAATTAATAGTAGT+GGG | - | tig0033638:24459-24478 | None:intergenic | 20.0% |
| !! | TTGAAAGTAATTAATAGTAG+TGG | - | tig0033638:24460-24479 | None:intergenic | 20.0% |
| ! | ATAACCGATAAGATAGTTTA+GGG | - | tig0033638:15365-15384 | None:intergenic | 25.0% |
| ! | TATAACCGATAAGATAGTTT+AGG | - | tig0033638:15366-15385 | None:intergenic | 25.0% |
| ! | GCTAGATTTATAAAAGAAAG+CGG | + | tig0033638:15420-15439 | Msa1451940:five_prime_UTR | 25.0% |
| ! | TGTAAAAAAGAAGGGTAAAA+AGG | - | tig0033638:15677-15696 | None:intergenic | 25.0% |
| !!! | TTTTTACCCTTCTTTTTTAC+AGG | + | tig0033638:15676-15695 | Msa1451940:intron | 25.0% |
| !!! | TTTTACCCTTCTTTTTTACA+GGG | + | tig0033638:15677-15696 | Msa1451940:intron | 25.0% |
| !!! | AAAGGTTTTGGATATTGAAA+GGG | + | tig0033638:15825-15844 | Msa1451940:intron | 25.0% |
| ! | AGCAAACAAATGAATGAATT+GGG | + | tig0033638:15923-15942 | Msa1451940:CDS | 25.0% |
| ! | GAATCAATTTAGTGTATGTT+TGG | + | tig0033638:16085-16104 | Msa1451940:intron | 25.0% |
| ! | AATTTAGTGTATGTTTGGAT+TGG | + | tig0033638:16090-16109 | Msa1451940:intron | 25.0% |
| ! | ACTTGAGTAAAATATGCATT+TGG | - | tig0033638:16390-16409 | None:intergenic | 25.0% |
| ! | TTAATTAAGCACTTGTGTAT+AGG | + | tig0033638:16785-16804 | Msa1451940:intron | 25.0% |
| !! | TAAGCCTATAAATTGTTTTC+AGG | - | tig0033638:16850-16869 | None:intergenic | 25.0% |
| ! | AAGCTTATAAAAATAACCTG+AGG | - | tig0033638:16875-16894 | None:intergenic | 25.0% |
| !! | AAAACTATAACTATGGCTTT+TGG | - | tig0033638:16964-16983 | None:intergenic | 25.0% |
| ! | GTATAAATGATAGAAGAGAA+GGG | - | tig0033638:17032-17051 | None:intergenic | 25.0% |
| ! | ATTATCTTGTATATCAATGC+TGG | + | tig0033638:17271-17290 | Msa1451940:CDS | 25.0% |
| ! | TTATCTTGTATATCAATGCT+GGG | + | tig0033638:17272-17291 | Msa1451940:CDS | 25.0% |
| ! | TATACTATTAATCCTTTCCT+CGG | - | tig0033638:17408-17427 | None:intergenic | 25.0% |
| !!! | CAATTTTAAGATCAAAGTCA+CGG | - | tig0033638:17460-17479 | None:intergenic | 25.0% |
| !!! | TCTGTATTTTTGAAAACAGA+TGG | - | tig0033638:17593-17612 | None:intergenic | 25.0% |
| ! | AGAGCAGATAAATATACATT+AGG | - | tig0033638:18279-18298 | None:intergenic | 25.0% |
| !!! | TGCAAAACATGTAATTTGTT+AGG | - | tig0033638:18302-18321 | None:intergenic | 25.0% |
| ! | AGAAAATATTGTCATAGACT+TGG | - | tig0033638:18593-18612 | None:intergenic | 25.0% |
| !! | GTCTATGACAATATTTTCTA+AGG | + | tig0033638:18594-18613 | Msa1451940:intron | 25.0% |
| ! | TAGTTAAATAGCTAGAATAC+TGG | + | tig0033638:18672-18691 | Msa1451940:intron | 25.0% |
| ! | ATTAATATCTAGCGTTACAT+TGG | - | tig0033638:18732-18751 | None:intergenic | 25.0% |
| ! | ATGAAAAATGTCCAATACAA+TGG | - | tig0033638:18813-18832 | None:intergenic | 25.0% |
| !! | ATTTTTCATTTTGCAGATCT+CGG | + | tig0033638:18824-18843 | Msa1451940:intron | 25.0% |
| ! | CTGCAACAATTGAAAAATAT+TGG | + | tig0033638:18873-18892 | Msa1451940:CDS | 25.0% |
| ! | TTATTCTCTAGATTTGATGA+TGG | + | tig0033638:18911-18930 | Msa1451940:CDS | 25.0% |
| !!! | ATTTGATGATGGTGTAAAAA+TGG | + | tig0033638:18922-18941 | Msa1451940:CDS | 25.0% |
| !!! | ACATCAATTATTTCTGAGTT+TGG | - | tig0033638:19174-19193 | None:intergenic | 25.0% |
| !! | GAAATAATTGATGTTTTCGT+AGG | + | tig0033638:19180-19199 | Msa1451940:intron | 25.0% |
| ! | TTAAGATTAATCTGTGCTTA+TGG | + | tig0033638:19231-19250 | Msa1451940:intron | 25.0% |
| !!! | TAATCTCAATGGATTGTTTA+TGG | + | tig0033638:19419-19438 | Msa1451940:intron | 25.0% |
| !!! | AATGTTTTTGTTTCACTCAA+TGG | + | tig0033638:19491-19510 | Msa1451940:intron | 25.0% |
| ! | TTCTCATAAAGGCTAAAATA+TGG | + | tig0033638:19559-19578 | Msa1451940:intron | 25.0% |
| !! | TAAAGGCTAAAATATGGTTT+TGG | + | tig0033638:19565-19584 | Msa1451940:intron | 25.0% |
| !!! | GGAACTTTTTTCTACAAAAT+GGG | - | tig0033638:19732-19751 | None:intergenic | 25.0% |
| !!! | AGGAACTTTTTTCTACAAAA+TGG | - | tig0033638:19733-19752 | None:intergenic | 25.0% |
| ! | TATATAAACTAAAGACAAGG+AGG | - | tig0033638:19955-19974 | None:intergenic | 25.0% |
| !! | TGATGACTAATCTAATTTGT+AGG | + | tig0033638:20135-20154 | Msa1451940:intron | 25.0% |
| ! | TTGATTCTATTTGATGTTAC+AGG | + | tig0033638:20260-20279 | Msa1451940:intron | 25.0% |
| !!! | ACAGAATCATTTGATTTTCA+AGG | - | tig0033638:20676-20695 | None:intergenic | 25.0% |
| ! | TCATCTAGAAATAAACAGTA+CGG | - | tig0033638:20786-20805 | None:intergenic | 25.0% |
| ! | GATTTCAGATATGTTATGTT+TGG | + | tig0033638:20831-20850 | Msa1451940:intron | 25.0% |
| ! | ATAGGAGAAATAAGAATGAA+AGG | + | tig0033638:20938-20957 | Msa1451940:intron | 25.0% |
| ! | AAGAATGAAAGGAATAGTTA+TGG | + | tig0033638:20949-20968 | Msa1451940:intron | 25.0% |
| ! | GAGAATATAATTCTTCACAA+AGG | - | tig0033638:21005-21024 | None:intergenic | 25.0% |
| ! | TTCTTTCATTTCAATTTCTC+TGG | + | tig0033638:21070-21089 | Msa1451940:intron | 25.0% |
| ! | GTCATAGAAAGAATAATTGA+TGG | - | tig0033638:21109-21128 | None:intergenic | 25.0% |
| !! | CAGTATTTCTAACTAAACTT+TGG | + | tig0033638:21237-21256 | Msa1451940:intron | 25.0% |
| ! | TTATGAAGAATGGGAAATAA+TGG | - | tig0033638:21444-21463 | None:intergenic | 25.0% |
| ! | CATAAGCTATTATGAAGAAT+GGG | - | tig0033638:21453-21472 | None:intergenic | 25.0% |
| !! | AATAGCTTATGCTTTTAGTA+TGG | + | tig0033638:21462-21481 | Msa1451940:intron | 25.0% |
| !!! | CATCAATATTTTGGACATAT+AGG | - | tig0033638:21603-21622 | None:intergenic | 25.0% |
| !! | AACGACTTTCATCAATATTT+TGG | - | tig0033638:21612-21631 | None:intergenic | 25.0% |
| !! | AATATTGATGAAAGTCGTTT+TGG | + | tig0033638:21613-21632 | Msa1451940:intron | 25.0% |
| !!! | ATATTGATGAAAGTCGTTTT+GGG | + | tig0033638:21614-21633 | Msa1451940:intron | 25.0% |
| !! | TATCAACTGTATTTTCTTTC+AGG | + | tig0033638:21674-21693 | Msa1451940:intron | 25.0% |
| ! | ATTATCCAAATTGTCCTTTA+TGG | + | tig0033638:21942-21961 | Msa1451940:intron | 25.0% |
| ! | TTATCCAAATTGTCCTTTAT+GGG | + | tig0033638:21943-21962 | Msa1451940:intron | 25.0% |
| ! | TTTGTTCCCTAAGAATAAAA+TGG | + | tig0033638:21968-21987 | Msa1451940:intron | 25.0% |
| ! | AGTATATACTACTGAGATAA+AGG | + | tig0033638:22702-22721 | Msa1451940:intron | 25.0% |
| ! | ACAAAATAAAAACAAGGTCA+TGG | - | tig0033638:22762-22781 | None:intergenic | 25.0% |
| ! | CAGGAAACAAAATAAAAACA+AGG | - | tig0033638:22768-22787 | None:intergenic | 25.0% |
| !!! | AGAAACATTTTACTGTTTCT+TGG | + | tig0033638:22860-22879 | Msa1451940:intron | 25.0% |
| ! | CAAAATGATATTAAGACTAG+TGG | - | tig0033638:22983-23002 | None:intergenic | 25.0% |
| !!! | TATCATTTTGTTTCATCAAC+TGG | + | tig0033638:22993-23012 | Msa1451940:intron | 25.0% |
| !!! | TTTTAGTTGTAACACCTTTA+AGG | - | tig0033638:23121-23140 | None:intergenic | 25.0% |
| ! | TGACATAGATGTAAAATAGA+AGG | + | tig0033638:23143-23162 | Msa1451940:intron | 25.0% |
| ! | ATAGATGTAAAATAGAAGGA+CGG | + | tig0033638:23147-23166 | Msa1451940:intron | 25.0% |
| ! | ACTTCACATAAAATCACTAA+AGG | - | tig0033638:23237-23256 | None:intergenic | 25.0% |
| !!! | CATAACTTCATTATTTTGGT+TGG | + | tig0033638:23299-23318 | Msa1451940:intron | 25.0% |
| ! | GATAGAAGAGTTAATTTACT+AGG | - | tig0033638:23335-23354 | None:intergenic | 25.0% |
| ! | GTAAATTAACTCTTCTATCA+TGG | + | tig0033638:23336-23355 | Msa1451940:intron | 25.0% |
| ! | GTGGAGAAAATTCATTTAAA+TGG | + | tig0033638:23365-23384 | Msa1451940:intron | 25.0% |
| !! | AAATTAAAAGTATGCTTGGA+TGG | - | tig0033638:24089-24108 | None:intergenic | 25.0% |
| !! | CATGAAATTAAAAGTATGCT+TGG | - | tig0033638:24093-24112 | None:intergenic | 25.0% |
| ! | TGAACACAATTTCCTTATTA+AGG | + | tig0033638:24228-24247 | Msa1451940:intron | 25.0% |
| !! | AGATACATAAAAGTATGTAG+TGG | + | tig0033638:24414-24433 | Msa1451940:intron | 25.0% |
| !! | GATACATAAAAGTATGTAGT+GGG | + | tig0033638:24415-24434 | Msa1451940:intron | 25.0% |
| !!! | GAAAGGTTTTGGATATTGAA+AGG | + | tig0033638:15824-15843 | Msa1451940:intron | 30.0% |
| GAGCAAACAAATGAATGAAT+TGG | + | tig0033638:15922-15941 | Msa1451940:CDS | 30.0% | |
| GTTTCCATATTCAATGTCTA+AGG | + | tig0033638:16037-16056 | Msa1451940:intron | 30.0% | |
| CTGTGAATTAGACGAAATAA+TGG | - | tig0033638:16175-16194 | None:intergenic | 30.0% | |
| TATCAACAATCAAGCCTTAA+GGG | - | tig0033638:16669-16688 | None:intergenic | 30.0% | |
| TTATCAACAATCAAGCCTTA+AGG | - | tig0033638:16670-16689 | None:intergenic | 30.0% | |
| AATTTATAGGCTTATACCTC+AGG | + | tig0033638:16856-16875 | Msa1451940:intron | 30.0% | |
| TATTCATTTGTGTATGTGCT+TGG | - | tig0033638:16900-16919 | None:intergenic | 30.0% | |
| GGTATAAATGATAGAAGAGA+AGG | - | tig0033638:17033-17052 | None:intergenic | 30.0% | |
| ATAGACCAACATATGATTGA+TGG | - | tig0033638:17095-17114 | None:intergenic | 30.0% | |
| TCTATCTTGTCATAGAAATG+TGG | + | tig0033638:17110-17129 | Msa1451940:intron | 30.0% | |
| ! | CATTTAGAGTTTCATCAACA+GGG | - | tig0033638:17193-17212 | None:intergenic | 30.0% |
| ! | TCATTTAGAGTTTCATCAAC+AGG | - | tig0033638:17194-17213 | None:intergenic | 30.0% |
| ATACAGATTGTGAGACTATT+TGG | + | tig0033638:17606-17625 | Msa1451940:CDS | 30.0% | |
| TCAATTGATTGTGGTGAATT+TGG | + | tig0033638:17725-17744 | Msa1451940:CDS | 30.0% | |
| TGTTATGGGATACTTTCTAT+GGG | + | tig0033638:17759-17778 | Msa1451940:CDS | 30.0% | |
| ! | TTGTCGAGAAAAATTTGCTT+TGG | - | tig0033638:18219-18238 | None:intergenic | 30.0% |
| GCAAATAACAATATAAGTGC+TGG | + | tig0033638:18252-18271 | Msa1451940:intron | 30.0% | |
| TCAGATTTACTATCCAATTC+AGG | - | tig0033638:18399-18418 | None:intergenic | 30.0% | |
| AGAAAGTGAAAAGAAAACAC+AGG | + | tig0033638:18442-18461 | Msa1451940:CDS | 30.0% | |
| CATATGTTGTTCAAAGTTGA+CGG | + | tig0033638:18782-18801 | Msa1451940:intron | 30.0% | |
| !! | TTGAAAAATATTGGTGTCAG+AGG | + | tig0033638:18882-18901 | Msa1451940:CDS | 30.0% |
| ! | TGATAATGTGCAATAATCTC+TGG | - | tig0033638:18974-18993 | None:intergenic | 30.0% |
| AATAAGAAGATACCATAGCA+AGG | + | tig0033638:19261-19280 | Msa1451940:intron | 30.0% | |
| ATAAGAAGATACCATAGCAA+GGG | + | tig0033638:19262-19281 | Msa1451940:intron | 30.0% | |
| ATTTGCCTTCATAATCTCAA+TGG | + | tig0033638:19408-19427 | Msa1451940:intron | 30.0% | |
| ACAATCCATTGAGATTATGA+AGG | - | tig0033638:19416-19435 | None:intergenic | 30.0% | |
| TCAATGGTGTTTGTTCTAAT+TGG | + | tig0033638:19507-19526 | Msa1451940:intron | 30.0% | |
| !!! | TTGTTTTTGAAAATAGTCCC+TGG | + | tig0033638:19661-19680 | Msa1451940:intron | 30.0% |
| ATGCAAAACATCACAAAAGT+GGG | - | tig0033638:19688-19707 | None:intergenic | 30.0% | |
| TATGCAAAACATCACAAAAG+TGG | - | tig0033638:19689-19708 | None:intergenic | 30.0% | |
| ! | AAGAGGCTAAAATATGGTTT+TGG | - | tig0033638:19828-19847 | None:intergenic | 30.0% |
| AGAATGGTGCAATTTATAAG+AGG | - | tig0033638:19845-19864 | None:intergenic | 30.0% | |
| TAGGCATGACATTGTTATAT+TGG | + | tig0033638:20154-20173 | Msa1451940:intron | 30.0% | |
| TCAAATACTTGAGTCTTTCT+TGG | + | tig0033638:20177-20196 | Msa1451940:CDS | 30.0% | |
| CTAGCATAATCAATCTTCAA+TGG | - | tig0033638:20316-20335 | None:intergenic | 30.0% | |
| CATTGAAGATTGATTATGCT+AGG | + | tig0033638:20314-20333 | Msa1451940:CDS | 30.0% | |
| ! | GATCAAATTGACTTCATAGT+TGG | + | tig0033638:20364-20383 | Msa1451940:CDS | 30.0% |
| ! | AACTTTAGCACCTTTAACTT+TGG | - | tig0033638:20409-20428 | None:intergenic | 30.0% |
| AATCCAAAATAAATGCGACA+TGG | - | tig0033638:20440-20459 | None:intergenic | 30.0% | |
| AAATAGGAGTAGCATTAGAA+AGG | + | tig0033638:20465-20484 | Msa1451940:intron | 30.0% | |
| TTCCTAACTTTAACAAACCT+AGG | + | tig0033638:20549-20568 | Msa1451940:intron | 30.0% | |
| !! | TACCTAGGTTTGTTAAAGTT+AGG | - | tig0033638:20554-20573 | None:intergenic | 30.0% |
| AATCAAATGATTCTGTCAAC+TGG | + | tig0033638:20680-20699 | Msa1451940:intron | 30.0% | |
| ATCAAATGATTCTGTCAACT+GGG | + | tig0033638:20681-20700 | Msa1451940:intron | 30.0% | |
| ! | AAACAATATTTTATTGGGGG+TGG | + | tig0033638:20727-20746 | Msa1451940:intron | 30.0% |
| ! | AACAATATTTTATTGGGGGT+GGG | + | tig0033638:20728-20747 | Msa1451940:intron | 30.0% |
| AGAAATAAACAGTACGGTAA+TGG | - | tig0033638:20780-20799 | None:intergenic | 30.0% | |
| GATATGTTATGTTTGGATGA+AGG | + | tig0033638:20838-20857 | Msa1451940:intron | 30.0% | |
| ATGTTTGGATGAAGGATATA+AGG | + | tig0033638:20846-20865 | Msa1451940:intron | 30.0% | |
| TGTTTGGATGAAGGATATAA+GGG | + | tig0033638:20847-20866 | Msa1451940:intron | 30.0% | |
| AGGGGATACCATATATAAAT+AGG | + | tig0033638:20920-20939 | Msa1451940:intron | 30.0% | |
| ! | CATTTGATAGTTGTGATGAA+AGG | + | tig0033638:20973-20992 | Msa1451940:intron | 30.0% |
| AGAAAGATAGAAAGAGTCAA+GGG | - | tig0033638:21054-21073 | None:intergenic | 30.0% | |
| AAGAAAGATAGAAAGAGTCA+AGG | - | tig0033638:21055-21074 | None:intergenic | 30.0% | |
| ATGACTTAGTTGTTGCATTT+AGG | + | tig0033638:21124-21143 | Msa1451940:intron | 30.0% | |
| TATAGCCCAGAAAAAATCTT+TGG | - | tig0033638:21185-21204 | None:intergenic | 30.0% | |
| ! | ATGTTTCTACTTTCTAGTCA+TGG | + | tig0033638:21294-21313 | Msa1451940:intron | 30.0% |
| GCATAAGCTATTATGAAGAA+TGG | - | tig0033638:21454-21473 | None:intergenic | 30.0% | |
| ! | AAATTTAAAATGCATGCCTG+AGG | + | tig0033638:21567-21586 | Msa1451940:intron | 30.0% |
| !! | TATTTTTCTTAAAGGGTGTG+AGG | - | tig0033638:21854-21873 | None:intergenic | 30.0% |
| AATTCCCATAAAGGACAATT+TGG | - | tig0033638:21950-21969 | None:intergenic | 30.0% | |
| TTAAGACCTTAATTAGTTGG+AGG | + | tig0033638:22001-22020 | Msa1451940:intron | 30.0% | |
| TAAGACCTTAATTAGTTGGA+GGG | + | tig0033638:22002-22021 | Msa1451940:intron | 30.0% | |
| TAATACCCTCCAACTAATTA+AGG | - | tig0033638:22010-22029 | None:intergenic | 30.0% | |
| !! | AATTAGTTGGAGGGTATTAT+AGG | + | tig0033638:22011-22030 | Msa1451940:intron | 30.0% |
| ! | ATGTTGCTTATATTCAAGAC+CGG | + | tig0033638:22104-22123 | Msa1451940:intron | 30.0% |
| AAAAGGAAAACTACTCAATC+CGG | - | tig0033638:22126-22145 | None:intergenic | 30.0% | |
| CTTGTGCTATATGTTAATTG+TGG | - | tig0033638:22335-22354 | None:intergenic | 30.0% | |
| ATGCAGCATTTAGTCAAAAT+GGG | - | tig0033638:22428-22447 | None:intergenic | 30.0% | |
| AAATGTCAACTTCAACCAAT+TGG | + | tig0033638:22516-22535 | Msa1451940:CDS | 30.0% | |
| AAGCATATCAAACAGACAAA+AGG | - | tig0033638:22593-22612 | None:intergenic | 30.0% | |
| ! | CTGTTTGATATGCTTCATTT+TGG | + | tig0033638:22598-22617 | Msa1451940:intron | 30.0% |
| TATTGTCTACTATAGTGTGA+AGG | + | tig0033638:22667-22686 | Msa1451940:intron | 30.0% | |
| ATTGTCTACTATAGTGTGAA+GGG | + | tig0033638:22668-22687 | Msa1451940:intron | 30.0% | |
| !! | ACGTACAAAACTTTGAAATC+AGG | - | tig0033638:22787-22806 | None:intergenic | 30.0% |
| TGTGAAAACTATTGCTTCTA+CGG | - | tig0033638:22814-22833 | None:intergenic | 30.0% | |
| ATTACAACATCCAACCTTAA+AGG | + | tig0033638:23104-23123 | Msa1451940:intron | 30.0% | |
| CATAAGGAGAAAAAAAAGCA+AGG | + | tig0033638:23184-23203 | Msa1451940:intron | 30.0% | |
| TTTATGTGAAGTATATTGGC+AGG | + | tig0033638:23245-23264 | Msa1451940:intron | 30.0% | |
| ! | GCAGCATAACTTCATTATTT+TGG | + | tig0033638:23295-23314 | Msa1451940:intron | 30.0% |
| TATTTCAGTTGTACATGAGA+TGG | + | tig0033638:23410-23429 | Msa1451940:intron | 30.0% | |
| ATTACTGAAAAACGGTTACA+AGG | + | tig0033638:23644-23663 | Msa1451940:intron | 30.0% | |
| AGTTCACACTTCACATATTT+CGG | + | tig0033638:24195-24214 | Msa1451940:intron | 30.0% | |
| ! | TCCATTACGTGATTTTTGAA+GGG | - | tig0033638:24308-24327 | None:intergenic | 30.0% |
| ! | ATCCATTACGTGATTTTTGA+AGG | - | tig0033638:24309-24328 | None:intergenic | 30.0% |
| TATGTTATAGTCTCATTTGG+AGG | - | tig0033638:24357-24376 | None:intergenic | 30.0% | |
| TGCTATGTTATAGTCTCATT+TGG | - | tig0033638:24360-24379 | None:intergenic | 30.0% | |
| TATCTCTCACTAAATGACAT+AGG | - | tig0033638:24395-24414 | None:intergenic | 30.0% | |
| AATCACATGTGTTAGTGTTA+GGG | - | tig0033638:24856-24875 | None:intergenic | 30.0% | |
| TAATCACATGTGTTAGTGTT+AGG | - | tig0033638:24857-24876 | None:intergenic | 30.0% | |
| GATGAAGGTTAATAAGGAGT+AGG | - | tig0033638:15340-15359 | None:intergenic | 35.0% | |
| TCAGCCCTAAACTATCTTAT+CGG | + | tig0033638:15358-15377 | Msa1451940:five_prime_UTR | 35.0% | |
| TAGTTACCAGAGAAAGACTT+GGG | - | tig0033638:15555-15574 | None:intergenic | 35.0% | |
| TTAGTTACCAGAGAAAGACT+TGG | - | tig0033638:15556-15575 | None:intergenic | 35.0% | |
| ATCGTCCCTGTAAAAAAGAA+GGG | - | tig0033638:15685-15704 | None:intergenic | 35.0% | |
| ! | ATTGTTGTTGTGATCAGCTT+CGG | - | tig0033638:15730-15749 | None:intergenic | 35.0% |
| !! | TGAGATTATTGTTTTACCCG+AGG | + | tig0033638:15889-15908 | Msa1451940:CDS | 35.0% |
| !! | TATTGTTTTACCCGAGGATT+TGG | + | tig0033638:15895-15914 | Msa1451940:CDS | 35.0% |
| TTTGCTCAATTCCAAATCCT+CGG | - | tig0033638:15909-15928 | None:intergenic | 35.0% | |
| CACTCCTTAGACATTGAATA+TGG | - | tig0033638:16044-16063 | None:intergenic | 35.0% | |
| CAGTATATGTAGTGCATGTT+TGG | - | tig0033638:16203-16222 | None:intergenic | 35.0% | |
| CAAACATGCACTACATATAC+TGG | + | tig0033638:16201-16220 | Msa1451940:intron | 35.0% | |
| !! | TACATATACTGGCTCCAATT+AGG | + | tig0033638:16212-16231 | Msa1451940:intron | 35.0% |
| TGAGCTAATAATAGCTAGCT+TGG | - | tig0033638:16436-16455 | None:intergenic | 35.0% | |
| AGCTATTATTAGCTCACAAG+TGG | + | tig0033638:16440-16459 | Msa1451940:intron | 35.0% | |
| GCTATTATTAGCTCACAAGT+GGG | + | tig0033638:16441-16460 | Msa1451940:intron | 35.0% | |
| !! | ATTACTATAAAGGGGGTGTT+TGG | + | tig0033638:16753-16772 | Msa1451940:intron | 35.0% |
| !! | TTACTATAAAGGGGGTGTTT+GGG | + | tig0033638:16754-16773 | Msa1451940:intron | 35.0% |
| AAGTGCCATCAATCATATGT+TGG | + | tig0033638:17087-17106 | Msa1451940:intron | 35.0% | |
| TAGAAATGTGGACCAGTAAA+AGG | + | tig0033638:17122-17141 | Msa1451940:intron | 35.0% | |
| ACCAGTAAAAGGCAAAAAGA+AGG | + | tig0033638:17133-17152 | Msa1451940:CDS | 35.0% | |
| CCAGTAAAAGGCAAAAAGAA+GGG | + | tig0033638:17134-17153 | Msa1451940:CDS | 35.0% | |
| TTGAATTATCTCCTTCACCA+GGG | - | tig0033638:17355-17374 | None:intergenic | 35.0% | |
| ATAATTCAACATGCTGCACT+GGG | + | tig0033638:17366-17385 | Msa1451940:CDS | 35.0% | |
| ! | TTGCATATGACAGAGTTGAT+GGG | + | tig0033638:17702-17721 | Msa1451940:CDS | 35.0% |
| ATTGTGGTGAATTTGGAGAT+TGG | + | tig0033638:17732-17751 | Msa1451940:CDS | 35.0% | |
| GTGTTATGGGATACTTTCTA+TGG | + | tig0033638:17758-17777 | Msa1451940:CDS | 35.0% | |
| TCAAAACAGACACTTCTACA+TGG | + | tig0033638:17801-17820 | Msa1451940:CDS | 35.0% | |
| CAAAACAGACACTTCTACAT+GGG | + | tig0033638:17802-17821 | Msa1451940:CDS | 35.0% | |
| !! | TGAAGCTCTAAAGTCATTAG+AGG | + | tig0033638:17883-17902 | Msa1451940:CDS | 35.0% |
| CATCTGAATGATGAAGAGAT+TGG | - | tig0033638:18054-18073 | None:intergenic | 35.0% | |
| ! | TCAATTACCATGTTTTCCGT+TGG | - | tig0033638:18372-18391 | None:intergenic | 35.0% |
| AAGTGAAAAGAAAACACAGG+CGG | + | tig0033638:18445-18464 | Msa1451940:CDS | 35.0% | |
| ACTGGACAAAACTTATATGC+AGG | - | tig0033638:18756-18775 | None:intergenic | 35.0% | |
| CGTCAACTTTGAACAACATA+TGG | - | tig0033638:18784-18803 | None:intergenic | 35.0% | |
| ATTGTTGCAGAATAAGCTTC+AGG | - | tig0033638:18863-18882 | None:intergenic | 35.0% | |
| ! | TGATGGTGTAAAAATGGATG+AGG | + | tig0033638:18928-18947 | Msa1451940:CDS | 35.0% |
| TAAAAATGGATGAGGAAGGA+TGG | + | tig0033638:18936-18955 | Msa1451940:CDS | 35.0% | |
| ACAGTAATTGACTGTTTCAC+CGG | + | tig0033638:19016-19035 | Msa1451940:CDS | 35.0% | |
| ! | AATGTGTTCCAACTTGCTTT+GGG | + | tig0033638:19336-19355 | Msa1451940:intron | 35.0% |
| CAAATCCATTGAGAACATGA+AGG | - | tig0033638:19393-19412 | None:intergenic | 35.0% | |
| ! | ATCACTCTTCACTCTTTTAC+CGG | + | tig0033638:19449-19468 | Msa1451940:intron | 35.0% |
| TTCTAATTGGATTGTTCACC+TGG | + | tig0033638:19520-19539 | Msa1451940:intron | 35.0% | |
| TGCAAAACATCACAAAAGTG+GGG | - | tig0033638:19687-19706 | None:intergenic | 35.0% | |
| ! | TTTGTGATGTTTTGCATACG+TGG | + | tig0033638:19691-19710 | Msa1451940:intron | 35.0% |
| TTGAAACCAGACATATTTGC+AGG | + | tig0033638:19800-19819 | Msa1451940:intron | 35.0% | |
| TGAAACCAGACATATTTGCA+GGG | + | tig0033638:19801-19820 | Msa1451940:intron | 35.0% | |
| AACAAATACTGCTCACAGAA+TGG | - | tig0033638:19861-19880 | None:intergenic | 35.0% | |
| ATAAACTAAAGACAAGGAGG+AGG | - | tig0033638:19952-19971 | None:intergenic | 35.0% | |
| TGTAGACAAGTGATTCATGT+TGG | + | tig0033638:20077-20096 | Msa1451940:intron | 35.0% | |
| GTAGACAAGTGATTCATGTT+GGG | + | tig0033638:20078-20097 | Msa1451940:intron | 35.0% | |
| ! | TAATGCTGCTATTTATCGAG+TGG | + | tig0033638:20339-20358 | Msa1451940:CDS | 35.0% |
| AATAAATGCGACATGGCTAA+AGG | - | tig0033638:20433-20452 | None:intergenic | 35.0% | |
| ! | TAGCCATGTCGCATTTATTT+TGG | + | tig0033638:20434-20453 | Msa1451940:intron | 35.0% |
| ACAATTAGACGGATAAAGAC+GGG | - | tig0033638:20516-20535 | None:intergenic | 35.0% | |
| CACAATTAGACGGATAAAGA+CGG | - | tig0033638:20517-20536 | None:intergenic | 35.0% | |
| !! | GGTTTGTTAAAGTTAGGAAG+AGG | - | tig0033638:20548-20567 | None:intergenic | 35.0% |
| GCATAGCACAAATATTACCT+AGG | - | tig0033638:20569-20588 | None:intergenic | 35.0% | |
| ! | ACAATATTTTATTGGGGGTG+GGG | + | tig0033638:20729-20748 | Msa1451940:intron | 35.0% |
| TTATGATTATTCAGGGCAGT+TGG | + | tig0033638:20889-20908 | Msa1451940:intron | 35.0% | |
| TTTACTATTTCCACTGCTTC+TGG | + | tig0033638:21159-21178 | Msa1451940:intron | 35.0% | |
| !!! | TTCTGGCCAAAGATTTTTTC+TGG | + | tig0033638:21176-21195 | Msa1451940:intron | 35.0% |
| !!! | TCTGGCCAAAGATTTTTTCT+GGG | + | tig0033638:21177-21196 | Msa1451940:intron | 35.0% |
| GAAAGTAGAAACATGTCACA+TGG | - | tig0033638:21288-21307 | None:intergenic | 35.0% | |
| TCTTTCCTTCAAGTCAAGTT+AGG | + | tig0033638:21336-21355 | Msa1451940:intron | 35.0% | |
| ! | GCTTATGCTTTTAGTATGGT+TGG | + | tig0033638:21466-21485 | Msa1451940:intron | 35.0% |
| TAGGGAACAAATTCCCATAA+AGG | - | tig0033638:21959-21978 | None:intergenic | 35.0% | |
| TATGTAGAGCTATTGCATAG+CGG | + | tig0033638:22187-22206 | Msa1451940:intron | 35.0% | |
| TTGTGAAATAGCTGCTATAG+CGG | + | tig0033638:22256-22275 | Msa1451940:intron | 35.0% | |
| AGCATTTAGTCAAAATGGGA+GGG | - | tig0033638:22424-22443 | None:intergenic | 35.0% | |
| GATGCAGCATTTAGTCAAAA+TGG | - | tig0033638:22429-22448 | None:intergenic | 35.0% | |
| TGAAGTTGACATTTCTTGGA+AGG | - | tig0033638:22510-22529 | None:intergenic | 35.0% | |
| TGGTTGAAGTTGACATTTCT+TGG | - | tig0033638:22514-22533 | None:intergenic | 35.0% | |
| ATAGAGATAACTCTGCCAAT+TGG | - | tig0033638:22534-22553 | None:intergenic | 35.0% | |
| !! | AGTTGTAACACCTTTAAGGT+TGG | - | tig0033638:23117-23136 | None:intergenic | 35.0% |
| TTAGTTAGAAGCTTGTGATG+AGG | - | tig0033638:23700-23719 | None:intergenic | 35.0% | |
| ACATGATAAGAAGAATGCAG+AGG | - | tig0033638:23802-23821 | None:intergenic | 35.0% | |
| ACTCTAACTTACGTCATGTT+TGG | + | tig0033638:23860-23879 | Msa1451940:intron | 35.0% | |
| TTACGTCATGTTTGGATAGA+TGG | + | tig0033638:23868-23887 | Msa1451940:intron | 35.0% | |
| TACGTCATGTTTGGATAGAT+GGG | + | tig0033638:23869-23888 | Msa1451940:intron | 35.0% | |
| ! | GGTTAACTGAGTCTACATTT+TGG | - | tig0033638:24040-24059 | None:intergenic | 35.0% |
| ! | TAAAAGTATGCTTGGATGGA+GGG | - | tig0033638:24085-24104 | None:intergenic | 35.0% |
| ! | TTAAAAGTATGCTTGGATGG+AGG | - | tig0033638:24086-24105 | None:intergenic | 35.0% |
| CCATTCTGATTTCATGGAAA+GGG | - | tig0033638:24169-24188 | None:intergenic | 35.0% | |
| CATATGCCATTCTGATTTCA+TGG | - | tig0033638:24175-24194 | None:intergenic | 35.0% | |
| AATGTAGCAAGGTGCAATTA+AGG | - | tig0033638:24333-24352 | None:intergenic | 35.0% | |
| TAATAACGTGTAAGCAGTTG+CGG | - | tig0033638:24517-24536 | None:intergenic | 35.0% | |
| TGTAGTGAACGAATGAATGA+AGG | - | tig0033638:24585-24604 | None:intergenic | 35.0% | |
| ! | TTTGTTTGAGACTTGAGAAG+AGG | - | tig0033638:24612-24631 | None:intergenic | 35.0% |
| !! | ATACTTGAAATTCGGTGTTC+AGG | + | tig0033638:24926-24945 | Msa1451940:intron | 35.0% |
| !! | AAATTCGGTGTTCAGGAAAA+TGG | + | tig0033638:24933-24952 | Msa1451940:intron | 35.0% |
| AGGGCTGATGAAGGTTAATA+AGG | - | tig0033638:15346-15365 | None:intergenic | 40.0% | |
| ! | AGATAGTTTAGGGCTGATGA+AGG | - | tig0033638:15355-15374 | None:intergenic | 40.0% |
| AGAACCGAGAGATTGAATAG+CGG | - | tig0033638:15519-15538 | None:intergenic | 40.0% | |
| CATCGTCCCTGTAAAAAAGA+AGG | - | tig0033638:15686-15705 | None:intergenic | 40.0% | |
| !!! | CTTCTTTTTTACAGGGACGA+TGG | + | tig0033638:15684-15703 | Msa1451940:intron | 40.0% |
| GATTCATCAAACCTCATTCC+TGG | + | tig0033638:15753-15772 | Msa1451940:CDS | 40.0% | |
| TTGCTCAATTCCAAATCCTC+GGG | - | tig0033638:15908-15927 | None:intergenic | 40.0% | |
| TCTTTGCCTGAAAGGAAAGA+GGG | - | tig0033638:15952-15971 | None:intergenic | 40.0% | |
| TTCTTTGCCTGAAAGGAAAG+AGG | - | tig0033638:15953-15972 | None:intergenic | 40.0% | |
| TTCCTTTCAGGCAAAGAATG+AGG | + | tig0033638:15955-15974 | Msa1451940:CDS | 40.0% | |
| TACCTCATTCTTTGCCTGAA+AGG | - | tig0033638:15960-15979 | None:intergenic | 40.0% | |
| CGCTGAGTTTCACAGAATTA+CGG | + | tig0033638:16115-16134 | Msa1451940:intron | 40.0% | |
| !!! | ACTCTGGTTTTAGCGAATCA+CGG | + | tig0033638:16144-16163 | Msa1451940:intron | 40.0% |
| ! | CCCTTCTTTTTGCCTTTTAC+TGG | - | tig0033638:17137-17156 | None:intergenic | 40.0% |
| TCTAAATGAAGTGAGTGCAG+AGG | + | tig0033638:17205-17224 | Msa1451940:CDS | 40.0% | |
| CACAGTAGGATGATTCACTT+TGG | - | tig0033638:17298-17317 | None:intergenic | 40.0% | |
| AGTGAATCATCCTACTGTGA+TGG | + | tig0033638:17299-17318 | Msa1451940:CDS | 40.0% | |
| GTTGAATTATCTCCTTCACC+AGG | - | tig0033638:17356-17375 | None:intergenic | 40.0% | |
| GATAATTCAACATGCTGCAC+TGG | + | tig0033638:17365-17384 | Msa1451940:CDS | 40.0% | |
| AAGATCAAAGTCACGGTTCT+GGG | - | tig0033638:17453-17472 | None:intergenic | 40.0% | |
| TAAGATCAAAGTCACGGTTC+TGG | - | tig0033638:17454-17473 | None:intergenic | 40.0% | |
| AAGGTTTGTGGGATAGAACT+GGG | + | tig0033638:17536-17555 | Msa1451940:CDS | 40.0% | |
| ! | AGTGATTCTGATTCGTTAGC+TGG | - | tig0033638:17662-17681 | None:intergenic | 40.0% |
| AGAATCACTTCCCATGAGTT+TGG | + | tig0033638:17673-17692 | Msa1451940:CDS | 40.0% | |
| GTTGCATATGACAGAGTTGA+TGG | + | tig0033638:17701-17720 | Msa1451940:CDS | 40.0% | |
| ! | GTTGATGGGTCAATTGATTG+TGG | + | tig0033638:17716-17735 | Msa1451940:CDS | 40.0% |
| TGGTGAATTTGGAGATTGGA+TGG | + | tig0033638:17736-17755 | Msa1451940:CDS | 40.0% | |
| ! | TTGGAGATTGGATGGTGTTA+TGG | + | tig0033638:17744-17763 | Msa1451940:CDS | 40.0% |
| !! | TGGAGATTGGATGGTGTTAT+GGG | + | tig0033638:17745-17764 | Msa1451940:CDS | 40.0% |
| ! | ATGGAGTATCTAGCATTTGG+TGG | + | tig0033638:17839-17858 | Msa1451940:CDS | 40.0% |
| ! | TGGAGTATCTAGCATTTGGT+GGG | + | tig0033638:17840-17859 | Msa1451940:CDS | 40.0% |
| CAAACAACCTGAAGAAACCT+TGG | + | tig0033638:17928-17947 | Msa1451940:CDS | 40.0% | |
| TGATAAGTTCTCGTCTACCA+AGG | - | tig0033638:17948-17967 | None:intergenic | 40.0% | |
| TTGGTAGACGAGAACTTATC+AGG | + | tig0033638:17947-17966 | Msa1451940:CDS | 40.0% | |
| !! | GAAGAGTATTCAGCTGAGAT+TGG | + | tig0033638:17980-17999 | Msa1451940:CDS | 40.0% |
| CTTGAGAGAACTAGTTGCAA+CGG | + | tig0033638:18079-18098 | Msa1451940:CDS | 40.0% | |
| CTGTTCTGTATCAAATACCC+TGG | + | tig0033638:18114-18133 | Msa1451940:CDS | 40.0% | |
| TCATACACCAACGGAAAACA+TGG | + | tig0033638:18362-18381 | Msa1451940:CDS | 40.0% | |
| GGTAATTGATACGCCTGAAT+TGG | + | tig0033638:18383-18402 | Msa1451940:CDS | 40.0% | |
| GAATAGCAACATACTGCAGA+AGG | - | tig0033638:18545-18564 | None:intergenic | 40.0% | |
| GGTGTAAAAATGGATGAGGA+AGG | + | tig0033638:18932-18951 | Msa1451940:CDS | 40.0% | |
| ATGCCATCCAATTTGCACAA+CGG | + | tig0033638:19050-19069 | Msa1451940:CDS | 40.0% | |
| ! | TTACTGTTTCTCCCTTGCTA+TGG | - | tig0033638:19276-19295 | None:intergenic | 40.0% |
| ! | CAATGTGTTCCAACTTGCTT+TGG | + | tig0033638:19335-19354 | Msa1451940:intron | 40.0% |
| ATACTGAACCCAAAGCAAGT+TGG | - | tig0033638:19347-19366 | None:intergenic | 40.0% | |
| !! | GAACATGAAGGCACTCATAT+AGG | - | tig0033638:19381-19400 | None:intergenic | 40.0% |
| CAAAACGAGGCATATTTGCA+GGG | - | tig0033638:19592-19611 | None:intergenic | 40.0% | |
| GTGTGATTGTATGCTTGCAT+CGG | + | tig0033638:19893-19912 | Msa1451940:intron | 40.0% | |
| GAGGAGGACAATATGAATGA+TGG | - | tig0033638:19936-19955 | None:intergenic | 40.0% | |
| ACTTGAGTCTTTCTTGGAGA+AGG | + | tig0033638:20183-20202 | Msa1451940:CDS | 40.0% | |
| AAAGGCAAGCATAAAACGTC+AGG | + | tig0033638:20483-20502 | Msa1451940:intron | 40.0% | |
| TCATCAAGAGGATACAGATG+AGG | - | tig0033638:20618-20637 | None:intergenic | 40.0% | |
| ! | CAATATTTTATTGGGGGTGG+GGG | + | tig0033638:20730-20749 | Msa1451940:intron | 40.0% |
| AATAATTGATGGAGCGCGTT+AGG | - | tig0033638:21098-21117 | None:intergenic | 40.0% | |
| ACATGTCACATGGAACTCTT+GGG | - | tig0033638:21278-21297 | None:intergenic | 40.0% | |
| AACATGTCACATGGAACTCT+TGG | - | tig0033638:21279-21298 | None:intergenic | 40.0% | |
| TTCCTTCAAGTCAAGTTAGG+AGG | + | tig0033638:21339-21358 | Msa1451940:intron | 40.0% | |
| GTATGCTTCTTTGACCATCA+AGG | + | tig0033638:21504-21523 | Msa1451940:intron | 40.0% | |
| TAAAATGCATGCCTGAGGTT+AGG | + | tig0033638:21572-21591 | Msa1451940:intron | 40.0% | |
| AAAATGCATGCCTGAGGTTA+GGG | + | tig0033638:21573-21592 | Msa1451940:intron | 40.0% | |
| CATATCATAAGTCGCAACCT+TGG | - | tig0033638:21745-21764 | None:intergenic | 40.0% | |
| GCTATAGCAATACTGCATAG+TGG | + | tig0033638:22280-22299 | Msa1451940:intron | 40.0% | |
| CAGCATTTAGTCAAAATGGG+AGG | - | tig0033638:22425-22444 | None:intergenic | 40.0% | |
| ! | TACTCTGTTCAGTGTTGCTA+AGG | + | tig0033638:22459-22478 | Msa1451940:CDS | 40.0% |
| TTGTTTGAACTTCAACCGCT+TGG | + | tig0033638:23034-23053 | Msa1451940:intron | 40.0% | |
| TGTTTGAACTTCAACCGCTT+GGG | + | tig0033638:23035-23054 | Msa1451940:intron | 40.0% | |
| GGAACACTCATGTACACATA+AGG | + | tig0033638:23168-23187 | Msa1451940:intron | 40.0% | |
| TGTGAAGTATATTGGCAGGT+AGG | + | tig0033638:23249-23268 | Msa1451940:intron | 40.0% | |
| GTGAAGTATATTGGCAGGTA+GGG | + | tig0033638:23250-23269 | Msa1451940:intron | 40.0% | |
| AACTCTTCTATCATGGTGAC+AGG | + | tig0033638:23343-23362 | Msa1451940:intron | 40.0% | |
| TTCAGTTGTACATGAGATGG+AGG | + | tig0033638:23413-23432 | Msa1451940:intron | 40.0% | |
| TCAGTTGTACATGAGATGGA+GGG | + | tig0033638:23414-23433 | Msa1451940:intron | 40.0% | |
| GCTACAAGTGAATCAAGCAA+AGG | + | tig0033638:23462-23481 | Msa1451940:intron | 40.0% | |
| !! | TCTTCAGCTAGTCTTTGTTC+TGG | - | tig0033638:23502-23521 | None:intergenic | 40.0% |
| TTGTTCTTAGAGAGTTGCTC+AGG | - | tig0033638:23565-23584 | None:intergenic | 40.0% | |
| ! | CTCTAAGAACAAAAACGCCA+TGG | + | tig0033638:23573-23592 | Msa1451940:intron | 40.0% |
| CAATCTTCAAGCTTCATCCA+TGG | - | tig0033638:23593-23612 | None:intergenic | 40.0% | |
| GAAGAATGCAGAGGTTACTT+AGG | - | tig0033638:23793-23812 | None:intergenic | 40.0% | |
| TTTGAAAGGGAGGGTTTGAA+GGG | - | tig0033638:24061-24080 | None:intergenic | 40.0% | |
| !! | TTTTGAAAGGGAGGGTTTGA+AGG | - | tig0033638:24062-24081 | None:intergenic | 40.0% |
| !!! | TTGGATGGAGGGTTTTGAAA+GGG | - | tig0033638:24074-24093 | None:intergenic | 40.0% |
| GATTTCATGGAAAGGGACAT+GGG | - | tig0033638:24162-24181 | None:intergenic | 40.0% | |
| TGATTTCATGGAAAGGGACA+TGG | - | tig0033638:24163-24182 | None:intergenic | 40.0% | |
| CCCTTTCCATGAAATCAGAA+TGG | + | tig0033638:24166-24185 | Msa1451940:intron | 40.0% | |
| GCCATTCTGATTTCATGGAA+AGG | - | tig0033638:24170-24189 | None:intergenic | 40.0% | |
| GCCCTTCAAAAATCACGTAA+TGG | + | tig0033638:24304-24323 | Msa1451940:intron | 40.0% | |
| CATTTGGAGGAAATGTAGCA+AGG | - | tig0033638:24344-24363 | None:intergenic | 40.0% | |
| TTGGGGATGGAAAACATAAC+CGG | - | tig0033638:24676-24695 | None:intergenic | 40.0% | |
| ATGTTTGTGTTAGCGGTTTC+TGG | - | tig0033638:24715-24734 | None:intergenic | 40.0% | |
| CCGTATGATGTTTGTGTTAG+CGG | - | tig0033638:24722-24741 | None:intergenic | 40.0% | |
| CCGCTAACACAAACATCATA+CGG | + | tig0033638:24719-24738 | Msa1451940:intron | 40.0% | |
| ! | GTCATCGGTAACTTGCATTA+CGG | - | tig0033638:24762-24781 | None:intergenic | 40.0% |
| !! | TCCTGGCTTTTCTTAGAACT+CGG | - | tig0033638:24789-24808 | None:intergenic | 40.0% |
| CAGGATTTCGAAATCATCTC+CGG | + | tig0033638:24804-24823 | Msa1451940:intron | 40.0% | |
| !!! | GTGTTAGGGTTTTGTTACCA+GGG | - | tig0033638:24842-24861 | None:intergenic | 40.0% |
| !!! | AGTGTTAGGGTTTTGTTACC+AGG | - | tig0033638:24843-24862 | None:intergenic | 40.0% |
| AAATGGATGGATATTGCAGC+AGG | + | tig0033638:24950-24969 | Msa1451940:CDS | 40.0% | |
| AATGGATGGATATTGCAGCA+GGG | + | tig0033638:24951-24970 | Msa1451940:CDS | 40.0% | |
| ATATTGCAGCAGGGATACTT+TGG | + | tig0033638:24960-24979 | Msa1451940:CDS | 40.0% | |
| TGAGAAGATTCAATCCAGTC+TGG | - | tig0033638:25023-25042 | None:intergenic | 40.0% | |
| ! | GGTGATCGCCATATTGACTA+CGG | - | tig0033638:15477-15496 | None:intergenic | 45.0% |
| ATGTCACCCAAGTCTTTCTC+TGG | + | tig0033638:15546-15565 | Msa1451940:CDS | 45.0% | |
| CTTCGGAAGATGGTTGAACT+TGG | - | tig0033638:15713-15732 | None:intergenic | 45.0% | |
| TTGTGATCAGCTTCGGAAGA+TGG | - | tig0033638:15723-15742 | None:intergenic | 45.0% | |
| ! | GAGTGACAGTGTTCAAGTTC+TGG | + | tig0033638:16059-16078 | Msa1451940:intron | 45.0% |
| AGAATTACGGTGTAGCACTC+TGG | + | tig0033638:16128-16147 | Msa1451940:intron | 45.0% | |
| TGAGCTCAGAGTAGCCTAAT+TGG | - | tig0033638:16229-16248 | None:intergenic | 45.0% | |
| CGCTCACTATCTAAGTTGCT+GGG | - | tig0033638:16293-16312 | None:intergenic | 45.0% | |
| TCGCTCACTATCTAAGTTGC+TGG | - | tig0033638:16294-16313 | None:intergenic | 45.0% | |
| CTTAGATAGTGAGCGAAGCT+CGG | + | tig0033638:16298-16317 | Msa1451940:intron | 45.0% | |
| TTTGGATGGAGGGTTTAGGA+GGG | - | tig0033638:16642-16661 | None:intergenic | 45.0% | |
| TGTGTTTGGATGGAGGGTTT+AGG | - | tig0033638:16646-16665 | None:intergenic | 45.0% | |
| ! | TAAGGGTGTGTTTGGATGGA+GGG | - | tig0033638:16652-16671 | None:intergenic | 45.0% |
| ! | TTAAGGGTGTGTTTGGATGG+AGG | - | tig0033638:16653-16672 | None:intergenic | 45.0% |
| TCCATCCAAACACACCCTTA+AGG | + | tig0033638:16652-16671 | Msa1451940:intron | 45.0% | |
| ! | TCAAGCCTTAAGGGTGTGTT+TGG | - | tig0033638:16660-16679 | None:intergenic | 45.0% |
| AAATGAAGTGAGTGCAGAGG+AGG | + | tig0033638:17208-17227 | Msa1451940:CDS | 45.0% | |
| ! | GTTTGCTAATGGTGTTTCCG+AGG | + | tig0033638:17388-17407 | Msa1451940:CDS | 45.0% |
| CTAATGGTGTTTCCGAGGAA+AGG | + | tig0033638:17393-17412 | Msa1451940:CDS | 45.0% | |
| ATTGCACATGCCTCAGATAC+TGG | + | tig0033638:17476-17495 | Msa1451940:CDS | 45.0% | |
| AGCAGAGATTCCAGTATCTG+AGG | - | tig0033638:17489-17508 | None:intergenic | 45.0% | |
| TCAGATACTGGAATCTCTGC+TGG | + | tig0033638:17488-17507 | Msa1451940:CDS | 45.0% | |
| TCTGCTGGAAGCCATTTAAC+AGG | + | tig0033638:17503-17522 | Msa1451940:CDS | 45.0% | |
| TGTCACCAGCACCTGTTAAA+TGG | - | tig0033638:17517-17536 | None:intergenic | 45.0% | |
| !! | TTTAACAGGTGCTGGTGACA+AGG | + | tig0033638:17517-17536 | Msa1451940:CDS | 45.0% |
| CAAGGTTTGTGGGATAGAAC+TGG | + | tig0033638:17535-17554 | Msa1451940:CDS | 45.0% | |
| ! | GAGACTATTTGGAACGACGA+TGG | + | tig0033638:17617-17636 | Msa1451940:CDS | 45.0% |
| TCACTTCCCATGAGTTTGGA+AGG | + | tig0033638:17677-17696 | Msa1451940:CDS | 45.0% | |
| CACTTCCCATGAGTTTGGAA+GGG | + | tig0033638:17678-17697 | Msa1451940:CDS | 45.0% | |
| ACTTCCCATGAGTTTGGAAG+GGG | + | tig0033638:17679-17698 | Msa1451940:CDS | 45.0% | |
| ! | GGGATGGAGTATCTAGCATT+TGG | + | tig0033638:17836-17855 | Msa1451940:CDS | 45.0% |
| TCGTCTACCAAGGTTTCTTC+AGG | - | tig0033638:17938-17957 | None:intergenic | 45.0% | |
| ATACCTAACGACGTGATCCA+GGG | - | tig0033638:18134-18153 | None:intergenic | 45.0% | |
| AATACCTAACGACGTGATCC+AGG | - | tig0033638:18135-18154 | None:intergenic | 45.0% | |
| ATGCAGTCAAGCAACATCAG+AGG | + | tig0033638:18335-18354 | Msa1451940:CDS | 45.0% | |
| AGAGGTCGATCATACACCAA+CGG | + | tig0033638:18353-18372 | Msa1451940:CDS | 45.0% | |
| GAACAACATATGGCAGCTAC+TGG | - | tig0033638:18774-18793 | None:intergenic | 45.0% | |
| TGACGGCGATACCATTGTAT+TGG | + | tig0033638:18799-18818 | Msa1451940:intron | 45.0% | |
| TATCAAGCATCACGTTGTGC+AGG | + | tig0033638:18989-19008 | Msa1451940:CDS | 45.0% | |
| TCACCGTTGTGCAAATTGGA+TGG | - | tig0033638:19056-19075 | None:intergenic | 45.0% | |
| CTACTCACCGTTGTGCAAAT+TGG | - | tig0033638:19060-19079 | None:intergenic | 45.0% | |
| ATTTGCACAACGGTGAGTAG+TGG | + | tig0033638:19060-19079 | Msa1451940:intron | 45.0% | |
| TTTGCACAACGGTGAGTAGT+GGG | + | tig0033638:19061-19080 | Msa1451940:intron | 45.0% | |
| GAGTGCCTTCATGTTCTCAA+TGG | + | tig0033638:19385-19404 | Msa1451940:intron | 45.0% | |
| CCAAAACGAGGCATATTTGC+AGG | - | tig0033638:19593-19612 | None:intergenic | 45.0% | |
| ! | CCTGCAAATATGCCTCGTTT+TGG | + | tig0033638:19590-19609 | Msa1451940:intron | 45.0% |
| CAGGGACTAAAACCAAAACG+AGG | - | tig0033638:19605-19624 | None:intergenic | 45.0% | |
| TTGGTCCCTGCAAATATGTC+TGG | - | tig0033638:19809-19828 | None:intergenic | 45.0% | |
| ATGTTACAGGTGCAGACATG+TGG | + | tig0033638:20273-20292 | Msa1451940:intron | 45.0% | |
| !! | AGTTGGTGACTTCTTCGTCT+TGG | + | tig0033638:20381-20400 | Msa1451940:CDS | 45.0% |
| CGTCTTGGCACCAAAGTTAA+AGG | + | tig0033638:20396-20415 | Msa1451940:CDS | 45.0% | |
| ! | TGCTATGCGCTGTTGCTTAT+TGG | + | tig0033638:20581-20600 | Msa1451940:intron | 45.0% |
| GGGAGATCATGATCATCAAG+AGG | - | tig0033638:20630-20649 | None:intergenic | 45.0% | |
| ATTCTGTCAACTGGGATGTC+AGG | + | tig0033638:20689-20708 | Msa1451940:intron | 45.0% | |
| ! | AGGGCAGTTGGTTAGTTAGA+GGG | + | tig0033638:20901-20920 | Msa1451940:intron | 45.0% |
| AAATCTTTGGCCAGAAGCAG+TGG | - | tig0033638:21172-21191 | None:intergenic | 45.0% | |
| TCACATGGAACTCTTGGGAT+AGG | - | tig0033638:21273-21292 | None:intergenic | 45.0% | |
| ! | TGCCTCCTAACTTGACTTGA+AGG | - | tig0033638:21344-21363 | None:intergenic | 45.0% |
| TCTTTGACCATCAAGGTCTC+CGG | + | tig0033638:21511-21530 | Msa1451940:intron | 45.0% | |
| GGACAGTAAGGATTTGATCC+CGG | - | tig0033638:21533-21552 | None:intergenic | 45.0% | |
| TTAGAAGAGTGGGGACAGTA+AGG | - | tig0033638:21545-21564 | None:intergenic | 45.0% | |
| TGTCTTCCTATCTCCACCTT+GGG | + | tig0033638:21704-21723 | Msa1451940:CDS | 45.0% | |
| ACAATGCTTAGACCGCATGA+TGG | + | tig0033638:21768-21787 | Msa1451940:CDS | 45.0% | |
| CAATGCTTAGACCGCATGAT+GGG | + | tig0033638:21769-21788 | Msa1451940:CDS | 45.0% | |
| AGCACAAGTATCTGCTGCAT+AGG | + | tig0033638:22347-22366 | Msa1451940:intron | 45.0% | |
| TGGAAGGAACATGACAACTC+TGG | - | tig0033638:22494-22513 | None:intergenic | 45.0% | |
| GAAATTACCTCTAGCGACCA+TGG | - | tig0033638:22568-22587 | None:intergenic | 45.0% | |
| !! | CTATAGTGTGAAGGGTGTTG+TGG | + | tig0033638:22676-22695 | Msa1451940:intron | 45.0% |
| AAACTCTTAGTAGGCCCAAG+CGG | - | tig0033638:23052-23071 | None:intergenic | 45.0% | |
| TCTTCTATCATGGTGACAGG+TGG | + | tig0033638:23346-23365 | Msa1451940:intron | 45.0% | |
| !! | CAGCTAGTCTTTGTTCTGGA+AGG | - | tig0033638:23498-23517 | None:intergenic | 45.0% |
| GGTTACTTAGGACACAAGCT+AGG | - | tig0033638:23781-23800 | None:intergenic | 45.0% | |
| ! | CATGTTTGGATAGATGGGCT+TGG | + | tig0033638:23874-23893 | Msa1451940:intron | 45.0% |
| ! | TTTGGATAGATGGGCTTGGA+GGG | + | tig0033638:23878-23897 | Msa1451940:intron | 45.0% |
| !!! | ATGGAGGGTTTTGAAAGGGA+GGG | - | tig0033638:24070-24089 | None:intergenic | 45.0% |
| !!! | CTTGGATGGAGGGTTTTGAA+AGG | - | tig0033638:24075-24094 | None:intergenic | 45.0% |
| ! | TAGTGGGTCCTATCACTAAG+TGG | + | tig0033638:24431-24450 | Msa1451940:intron | 45.0% |
| AGTGGGTCCTATCACTAAGT+GGG | + | tig0033638:24432-24451 | Msa1451940:intron | 45.0% | |
| AGCAGTTGCGGAGAAGAAAT+TGG | - | tig0033638:24505-24524 | None:intergenic | 45.0% | |
| !! | GAACGAGAGGATGATGGTTT+TGG | - | tig0033638:24648-24667 | None:intergenic | 45.0% |
| ATGGAAAACATAACCGGACC+GGG | - | tig0033638:24670-24689 | None:intergenic | 45.0% | |
| GATGGAAAACATAACCGGAC+CGG | - | tig0033638:24671-24690 | None:intergenic | 45.0% | |
| !! | TGTGTTAGCGGTTTCTGGTT+CGG | - | tig0033638:24710-24729 | None:intergenic | 45.0% |
| TTAGAACTCGGACACGTCAT+CGG | - | tig0033638:24777-24796 | None:intergenic | 45.0% | |
| !! | TCCGAGTTCTAAGAAAAGCC+AGG | + | tig0033638:24785-24804 | Msa1451940:intron | 45.0% |
| CGGAGATGATTTCGAAATCC+TGG | - | tig0033638:24806-24825 | None:intergenic | 45.0% | |
| !!! | TTAGGGTTTTGTTACCAGGG+CGG | - | tig0033638:24839-24858 | None:intergenic | 45.0% |
| ! | TCGGTGTTCAGGAAAATGGA+TGG | + | tig0033638:24937-24956 | Msa1451940:intron | 45.0% |
| !! | ATAAATTCAATAATATTTAT+AGG | + | tig0033638:16702-16721 | Msa1451940:intron | 5.0% |
| !! | ATATAAATCTTAATTATAAA+CGG | + | tig0033638:20025-20044 | Msa1451940:intron | 5.0% |
| !!! | TATTTTTATTTTGTAAATTA+AGG | + | tig0033638:23920-23939 | Msa1451940:intron | 5.0% |
| !! | TAATTATTAATTAAAACTAT+TGG | + | tig0033638:24254-24273 | Msa1451940:intron | 5.0% |
| !! | AATTATATCATTATTATTAT+CGG | + | tig0033638:24882-24901 | Msa1451940:intron | 5.0% |
| ! | GCCATATTGACTACGGTCTC+CGG | - | tig0033638:15470-15489 | None:intergenic | 50.0% |
| !! | ATCACCGACTCCGACTATGA+AGG | + | tig0033638:15491-15510 | Msa1451940:CDS | 50.0% |
| AATAGCGGCGCCTTCATAGT+CGG | - | tig0033638:15504-15523 | None:intergenic | 50.0% | |
| !! | AAGAATGAGAAGCACTCGCC+AGG | - | tig0033638:15774-15793 | None:intergenic | 50.0% |
| TCTAAGTTGCTGGGCAGCAA+AGG | - | tig0033638:16284-16303 | None:intergenic | 50.0% | |
| TTGGATGGAGGGTTTAGGAG+GGG | - | tig0033638:16641-16660 | None:intergenic | 50.0% | |
| GTTTGGATGGAGGGTTTAGG+AGG | - | tig0033638:16643-16662 | None:intergenic | 50.0% | |
| ! | GCCTTAAGGGTGTGTTTGGA+TGG | - | tig0033638:16656-16675 | None:intergenic | 50.0% |
| ! | ATCCTACTGTGATGGTGCAG+CGG | + | tig0033638:17307-17326 | Msa1451940:CDS | 50.0% |
| !! | TGCTGCACTGGGTTTGCTAA+TGG | + | tig0033638:17377-17396 | Msa1451940:CDS | 50.0% |
| GGAAGCCATTTAACAGGTGC+TGG | + | tig0033638:17509-17528 | Msa1451940:CDS | 50.0% | |
| ! | GTGCTGGTGACAAGGTTTGT+GGG | + | tig0033638:17525-17544 | Msa1451940:CDS | 50.0% |
| GCAACCCCTTCCAAACTCAT+GGG | - | tig0033638:17686-17705 | None:intergenic | 50.0% | |
| TGCAACCCCTTCCAAACTCA+TGG | - | tig0033638:17687-17706 | None:intergenic | 50.0% | |
| GCTAGATACTCCATCCCTGA+GGG | - | tig0033638:17833-17852 | None:intergenic | 50.0% | |
| TGCTAGATACTCCATCCCTG+AGG | - | tig0033638:17834-17853 | None:intergenic | 50.0% | |
| TGGAGTCGCTGCTGGAAATT+TGG | + | tig0033638:18000-18019 | Msa1451940:CDS | 50.0% | |
| ATACCCTGGATCACGTCGTT+AGG | + | tig0033638:18128-18147 | Msa1451940:CDS | 50.0% | |
| ACATCACAAAAGTGGGGCCA+GGG | - | tig0033638:19681-19700 | None:intergenic | 50.0% | |
| AACATCACAAAAGTGGGGCC+AGG | - | tig0033638:19682-19701 | None:intergenic | 50.0% | |
| ! | CAGGGCAGTTGGTTAGTTAG+AGG | + | tig0033638:20900-20919 | Msa1451940:intron | 50.0% |
| ! | GGGCAGTTGGTTAGTTAGAG+GGG | + | tig0033638:20902-20921 | Msa1451940:intron | 50.0% |
| CTTTGACCATCAAGGTCTCC+GGG | + | tig0033638:21512-21531 | Msa1451940:intron | 50.0% | |
| TTTGATCCCGGAGACCTTGA+TGG | - | tig0033638:21521-21540 | None:intergenic | 50.0% | |
| CTGTCTTCCTATCTCCACCT+TGG | + | tig0033638:21703-21722 | Msa1451940:CDS | 50.0% | |
| GTCTTCCTATCTCCACCTTG+GGG | + | tig0033638:21705-21724 | Msa1451940:CDS | 50.0% | |
| GTCGCAACCTTGGCATAATC+TGG | - | tig0033638:21735-21754 | None:intergenic | 50.0% | |
| GCATCTACCTACCCATCATG+CGG | - | tig0033638:21783-21802 | None:intergenic | 50.0% | |
| ATTACCTCTAGCGACCATGG+TGG | - | tig0033638:22565-22584 | None:intergenic | 50.0% | |
| ! | GTTTGGATAGATGGGCTTGG+AGG | + | tig0033638:23877-23896 | Msa1451940:intron | 50.0% |
| ! | TTGGATAGATGGGCTTGGAG+GGG | + | tig0033638:23879-23898 | Msa1451940:intron | 50.0% |
| !!! | GATGGAGGGTTTTGAAAGGG+AGG | - | tig0033638:24071-24090 | None:intergenic | 50.0% |
| AGTGGGACCCACTTAGTGAT+AGG | - | tig0033638:24442-24461 | None:intergenic | 50.0% | |
| !!! | AGGATGATGGTTTTGGTGGC+TGG | - | tig0033638:24641-24660 | None:intergenic | 50.0% |
| !!! | CGAGAGGATGATGGTTTTGG+TGG | - | tig0033638:24645-24664 | None:intergenic | 50.0% |
| AACCATCATCCTCTCGTTCC+CGG | + | tig0033638:24649-24668 | Msa1451940:intron | 50.0% | |
| TTCCATCCCCAAACCCAAAC+CGG | + | tig0033638:24684-24703 | Msa1451940:intron | 50.0% | |
| TCATACGGTTCCGATCCAGT+CGG | + | tig0033638:24734-24753 | Msa1451940:intron | 50.0% | |
| !!! | TAGGGTTTTGTTACCAGGGC+GGG | - | tig0033638:24838-24857 | None:intergenic | 50.0% |
| TTGCAGCAGGGATACTTTGG+CGG | + | tig0033638:24963-24982 | Msa1451940:CDS | 50.0% | |
| CTTTGGCGGCAATGTTTGCT+TGG | + | tig0033638:24977-24996 | Msa1451940:CDS | 50.0% | |
| CTCAAGTGCTAGAACCAGAC+TGG | + | tig0033638:25006-25025 | Msa1451940:CDS | 50.0% | |
| TAAAAGAAAGCGGCGCGCTC+CGG | + | tig0033638:15430-15449 | Msa1451940:five_prime_UTR | 55.0% | |
| ! | TCCGGTTTGAGAGAGGTAGC+CGG | + | tig0033638:15448-15467 | Msa1451940:five_prime_UTR | 55.0% |
| TCCGGCTACCTCTCTCAAAC+CGG | - | tig0033638:15452-15471 | None:intergenic | 55.0% | |
| GCCGGAGACCGTAGTCAATA+TGG | + | tig0033638:15466-15485 | Msa1451940:exon | 55.0% | |
| GGCGCCGCTATTCAATCTCT+CGG | + | tig0033638:15512-15531 | Msa1451940:CDS | 55.0% | |
| !! | AGAAGCACTCGCCAGGAATG+AGG | - | tig0033638:15767-15786 | None:intergenic | 55.0% |
| GGGTCTCCCTCTTTCCTTTC+AGG | + | tig0033638:15943-15962 | Msa1451940:CDS | 55.0% | |
| GAGCTCACTAGCTGTCAGCT+TGG | + | tig0033638:16242-16261 | Msa1451940:intron | 55.0% | |
| TGGAGGGTTTAGGAGGGGAA+GGG | - | tig0033638:16636-16655 | None:intergenic | 55.0% | |
| ATGGAGGGTTTAGGAGGGGA+AGG | - | tig0033638:16637-16656 | None:intergenic | 55.0% | |
| ACAGGGTTGCTGCAAGTACG+TGG | - | tig0033638:17176-17195 | None:intergenic | 55.0% | |
| TTCCGCTGCACCATCACAGT+AGG | - | tig0033638:17312-17331 | None:intergenic | 55.0% | |
| TGGTGCAGCGGAAGTTGACA+TGG | + | tig0033638:17319-17338 | Msa1451940:CDS | 55.0% | |
| GACATGGCTCAATCTGTCCC+TGG | + | tig0033638:17335-17354 | Msa1451940:CDS | 55.0% | |
| GCTCAATCTGTCCCTGGTGA+AGG | + | tig0033638:17341-17360 | Msa1451940:CDS | 55.0% | |
| !! | GGTGCTGGTGACAAGGTTTG+TGG | + | tig0033638:17524-17543 | Msa1451940:CDS | 55.0% |
| GATACTCCATCCCTGAGGGT+GGG | - | tig0033638:17829-17848 | None:intergenic | 55.0% | |
| AGATACTCCATCCCTGAGGG+TGG | - | tig0033638:17830-17849 | None:intergenic | 55.0% | |
| CAAGCATCACGTTGTGCAGG+TGG | + | tig0033638:18992-19011 | Msa1451940:CDS | 55.0% | |
| ATTGACTGTTTCACCGGCGC+TGG | + | tig0033638:19022-19041 | Msa1451940:CDS | 55.0% | |
| ATGCATGCCTGAGGTTAGGG+TGG | + | tig0033638:21576-21595 | Msa1451940:intron | 55.0% | |
| TGCATGCCTGAGGTTAGGGT+GGG | + | tig0033638:21577-21596 | Msa1451940:intron | 55.0% | |
| TATAGGCCCACCCTAACCTC+AGG | - | tig0033638:21586-21605 | None:intergenic | 55.0% | |
| TTCCTATCTCCACCTTGGGG+TGG | + | tig0033638:21708-21727 | Msa1451940:CDS | 55.0% | |
| TAATCTGGTCCACCCCAAGG+TGG | - | tig0033638:21720-21739 | None:intergenic | 55.0% | |
| GCATAATCTGGTCCACCCCA+AGG | - | tig0033638:21723-21742 | None:intergenic | 55.0% | |
| GGGTGGACCAGATTATGCCA+AGG | + | tig0033638:21725-21744 | Msa1451940:CDS | 55.0% | |
| !! | GCTTAGACCGCATGATGGGT+AGG | + | tig0033638:21773-21792 | Msa1451940:intron | 55.0% |
| CTCTATCTGCCTCTCCACCA+TGG | + | tig0033638:22548-22567 | Msa1451940:CDS | 55.0% | |
| !! | GTTTCTGGTTCGGCCGGTTT+GGG | - | tig0033638:24700-24719 | None:intergenic | 55.0% |
| !! | TTAGCGGTTTCTGGTTCGGC+CGG | - | tig0033638:24706-24725 | None:intergenic | 55.0% |
| GGCGGCAATGTTTGCTTGGT+TGG | + | tig0033638:24981-25000 | Msa1451940:CDS | 55.0% | |
| GGCGCCTTCATAGTCGGAGT+CGG | - | tig0033638:15498-15517 | None:intergenic | 60.0% | |
| GGTTTAGGAGGGGAAGGGAG+GGG | - | tig0033638:16631-16650 | None:intergenic | 60.0% | |
| GGGTTTAGGAGGGGAAGGGA+GGG | - | tig0033638:16632-16651 | None:intergenic | 60.0% | |
| AGGGTTTAGGAGGGGAAGGG+AGG | - | tig0033638:16633-16652 | None:intergenic | 60.0% | |
| GCTGCAAGTACGTGGCTGCT+TGG | - | tig0033638:17168-17187 | None:intergenic | 60.0% | |
| !! | ACGACGATGGTGCTGCCACT+TGG | + | tig0033638:17630-17649 | Msa1451940:CDS | 60.0% |
| GTTAGCTGGCGACTGCCAAG+TGG | - | tig0033638:17648-17667 | None:intergenic | 60.0% | |
| TCTACATGGGACCCACCCTC+AGG | + | tig0033638:17815-17834 | Msa1451940:CDS | 60.0% | |
| CTACATGGGACCCACCCTCA+GGG | + | tig0033638:17816-17835 | Msa1451940:CDS | 60.0% | |
| GCTGAGATTGGAGTCGCTGC+TGG | + | tig0033638:17992-18011 | Msa1451940:CDS | 60.0% | |
| !! | ACTGTTTCACCGGCGCTGGT+GGG | + | tig0033638:19026-19045 | Msa1451940:CDS | 60.0% |
| GTCCACCCCAAGGTGGAGAT+AGG | - | tig0033638:21713-21732 | None:intergenic | 60.0% | |
| ! | CTCTAGCGACCATGGTGGAG+AGG | - | tig0033638:22560-22579 | None:intergenic | 60.0% |
| CTCTCCACCATGGTCGCTAG+AGG | + | tig0033638:22558-22577 | Msa1451940:CDS | 60.0% | |
| ! | TAGATGGGCTTGGAGGGGAG+AGG | + | tig0033638:23884-23903 | Msa1451940:intron | 60.0% |
| GACCGGGAACGAGAGGATGA+TGG | - | tig0033638:24654-24673 | None:intergenic | 60.0% | |
| TCATCCTCTCGTTCCCGGTC+CGG | + | tig0033638:24654-24673 | Msa1451940:intron | 60.0% | |
| ATAACCGGACCGGGAACGAG+AGG | - | tig0033638:24661-24680 | None:intergenic | 60.0% | |
| !! | GTTCGGCCGGTTTGGGTTTG+GGG | - | tig0033638:24693-24712 | None:intergenic | 60.0% |
| !! | GGTTCGGCCGGTTTGGGTTT+GGG | - | tig0033638:24694-24713 | None:intergenic | 60.0% |
| !! | TGGTTCGGCCGGTTTGGGTT+TGG | - | tig0033638:24695-24714 | None:intergenic | 60.0% |
| !! | GGTTTCTGGTTCGGCCGGTT+TGG | - | tig0033638:24701-24720 | None:intergenic | 60.0% |
| !! | CATTACGGCGCCGACTGGAT+CGG | - | tig0033638:24747-24766 | None:intergenic | 60.0% |
| !! | ACTTGCATTACGGCGCCGAC+TGG | - | tig0033638:24752-24771 | None:intergenic | 60.0% |
| ! | TTTTGTTACCAGGGCGGGCG+AGG | - | tig0033638:24833-24852 | None:intergenic | 60.0% |
| TAGGAGGGGAAGGGAGGGGA+GGG | - | tig0033638:16627-16646 | None:intergenic | 65.0% | |
| TTAGGAGGGGAAGGGAGGGG+AGG | - | tig0033638:16628-16647 | None:intergenic | 65.0% | |
| ATGGGACCCACCCTCAGGGA+TGG | + | tig0033638:17820-17839 | Msa1451940:CDS | 65.0% | |
| ! | GACTGTTTCACCGGCGCTGG+TGG | + | tig0033638:19025-19044 | Msa1451940:CDS | 65.0% |
| GATGGCATTCCCACCAGCGC+CGG | - | tig0033638:19038-19057 | None:intergenic | 65.0% | |
| ATGGGCTTGGAGGGGAGAGG+AGG | + | tig0033638:23887-23906 | Msa1451940:intron | 65.0% | |
| TGGGCTTGGAGGGGAGAGGA+GGG | + | tig0033638:23888-23907 | Msa1451940:intron | 65.0% | |
| !! | GGCCGGTTTGGGTTTGGGGA+TGG | - | tig0033638:24689-24708 | None:intergenic | 65.0% |
| ! | GGCGCGCTCCGGTTTGAGAG+AGG | + | tig0033638:15441-15460 | Msa1451940:five_prime_UTR | 70.0% |
| ! | GGGGTGGGGGAGCACATGAG+TGG | + | tig0033638:20743-20762 | Msa1451940:intron | 70.0% |
| GGGCTTGGAGGGGAGAGGAG+GGG | + | tig0033638:23889-23908 | Msa1451940:intron | 70.0% | |
| TGTTACCAGGGCGGGCGAGG+CGG | - | tig0033638:24830-24849 | None:intergenic | 70.0% | |
| ! | ACCAGGGCGGGCGAGGCGGC+CGG | - | tig0033638:24826-24845 | None:intergenic | 85.0% |
| ! | TCCGGCCGCCTCGCCCGCCC+TGG | + | tig0033638:24822-24841 | Msa1451940:intron | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0033638 | gene | 15337 | 25073 | 15337 | ID=Msa1451940;Name=Msa1451940 |
| tig0033638 | mRNA | 15337 | 25073 | 15337 | ID=Msa1451940-mRNA-1;Parent=Msa1451940;Name=Msa1451940-mRNA-1;_AED=0.15;_eAED=0.15;_QI=148|0.7|0.81|0.81|1|1|11|0|736 |
| tig0033638 | exon | 15337 | 15567 | 15337 | ID=Msa1451940-mRNA-1:exon:18289;Parent=Msa1451940-mRNA-1 |
| tig0033638 | exon | 15698 | 15774 | 15698 | ID=Msa1451940-mRNA-1:exon:18290;Parent=Msa1451940-mRNA-1 |
| tig0033638 | exon | 15882 | 15976 | 15882 | ID=Msa1451940-mRNA-1:exon:18291;Parent=Msa1451940-mRNA-1 |
| tig0033638 | exon | 17125 | 18149 | 17125 | ID=Msa1451940-mRNA-1:exon:18292;Parent=Msa1451940-mRNA-1 |
| tig0033638 | exon | 18323 | 18492 | 18323 | ID=Msa1451940-mRNA-1:exon:18293;Parent=Msa1451940-mRNA-1 |
| tig0033638 | exon | 18840 | 19071 | 18840 | ID=Msa1451940-mRNA-1:exon:18294;Parent=Msa1451940-mRNA-1 |
| tig0033638 | exon | 20157 | 20204 | 20157 | ID=Msa1451940-mRNA-1:exon:18295;Parent=Msa1451940-mRNA-1 |
| tig0033638 | exon | 20282 | 20417 | 20282 | ID=Msa1451940-mRNA-1:exon:18296;Parent=Msa1451940-mRNA-1 |
| tig0033638 | exon | 21696 | 21790 | 21696 | ID=Msa1451940-mRNA-1:exon:18297;Parent=Msa1451940-mRNA-1 |
| tig0033638 | exon | 22456 | 22579 | 22456 | ID=Msa1451940-mRNA-1:exon:18298;Parent=Msa1451940-mRNA-1 |
| tig0033638 | exon | 24948 | 25073 | 24948 | ID=Msa1451940-mRNA-1:exon:18299;Parent=Msa1451940-mRNA-1 |
| tig0033638 | five_prime_UTR | 15337 | 15484 | 15337 | ID=Msa1451940-mRNA-1:five_prime_utr;Parent=Msa1451940-mRNA-1 |
| tig0033638 | CDS | 15485 | 15567 | 15485 | ID=Msa1451940-mRNA-1:cds;Parent=Msa1451940-mRNA-1 |
| tig0033638 | CDS | 15698 | 15774 | 15698 | ID=Msa1451940-mRNA-1:cds;Parent=Msa1451940-mRNA-1 |
| tig0033638 | CDS | 15882 | 15976 | 15882 | ID=Msa1451940-mRNA-1:cds;Parent=Msa1451940-mRNA-1 |
| tig0033638 | CDS | 17125 | 18149 | 17125 | ID=Msa1451940-mRNA-1:cds;Parent=Msa1451940-mRNA-1 |
| tig0033638 | CDS | 18323 | 18492 | 18323 | ID=Msa1451940-mRNA-1:cds;Parent=Msa1451940-mRNA-1 |
| tig0033638 | CDS | 18840 | 19071 | 18840 | ID=Msa1451940-mRNA-1:cds;Parent=Msa1451940-mRNA-1 |
| tig0033638 | CDS | 20157 | 20204 | 20157 | ID=Msa1451940-mRNA-1:cds;Parent=Msa1451940-mRNA-1 |
| tig0033638 | CDS | 20282 | 20417 | 20282 | ID=Msa1451940-mRNA-1:cds;Parent=Msa1451940-mRNA-1 |
| tig0033638 | CDS | 21696 | 21790 | 21696 | ID=Msa1451940-mRNA-1:cds;Parent=Msa1451940-mRNA-1 |
| tig0033638 | CDS | 22456 | 22579 | 22456 | ID=Msa1451940-mRNA-1:cds;Parent=Msa1451940-mRNA-1 |
| tig0033638 | CDS | 24948 | 25073 | 24948 | ID=Msa1451940-mRNA-1:cds;Parent=Msa1451940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
