Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1455250 | XP_003603909.1 | 99.436 | 887 | 5 | 0 | 1 | 887 | 1 | 887 | 0.0 | 1808 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1455250 | sp|Q0WW26|COPG_ARATH | 84.555 | 887 | 136 | 1 | 1 | 887 | 1 | 886 | 0.0 | 1564 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1455250 | G7J6K1 | 99.436 | 887 | 5 | 0 | 1 | 887 | 1 | 887 | 0.0 | 1808 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0523520 | Msa1455250 | 0.940861 | 1.129148e-100 | -8.615850e-47 |
| Msa0968210 | Msa1455250 | 0.955613 | 2.025082e-113 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1455250 | MtrunA17_Chr3g0144501 | 99.436 | 887 | 5 | 0 | 1 | 887 | 1 | 887 | 0.0 | 1808 |
| Msa1455250 | MtrunA17_Chr4g0034881 | 90.203 | 888 | 83 | 2 | 1 | 887 | 1 | 885 | 0.0 | 1631 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1455250 | AT4G34450.1 | 84.555 | 887 | 136 | 1 | 1 | 887 | 1 | 886 | 0.0 | 1564 |
| Msa1455250 | AT2G16200.1 | 60.870 | 69 | 27 | 0 | 819 | 887 | 1 | 69 | 6.14e-24 | 96.3 |
| Msa1455250 | AT2G16200.2 | 61.538 | 65 | 25 | 0 | 823 | 887 | 19 | 83 | 2.72e-22 | 92.0 |
Find 224 sgRNAs with CRISPR-Local
Find 651 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTCCTGAGTAACATTCTT+AGG | 0.185985 | tig0035626:-10651 | Msa1455250:CDS |
| TTTGTCCCTTACTGCATTCT+TGG | 0.197372 | tig0035626:-5875 | Msa1455250:three_prime_UTR |
| TTCTTCTTCTTGTTATTCTC+TGG | 0.225543 | tig0035626:-14926 | Msa1455250:five_prime_UTR |
| CTCCAAGTGTGTTTAGATAA+AGG | 0.246814 | tig0035626:+9735 | Msa1455250:intergenic |
| GTGCTTGTGCGGTTGTCTTT+TGG | 0.261791 | tig0035626:-6126 | Msa1455250:CDS |
| AATACTGTCATCAACCTTCT+TGG | 0.299187 | tig0035626:-8554 | Msa1455250:CDS |
| TGCTGCAGTTGATGAGTTAA+AGG | 0.303960 | tig0035626:-10252 | Msa1455250:intron |
| CAAGTGTATGAACCTTAAAA+AGG | 0.314495 | tig0035626:+9354 | Msa1455250:intergenic |
| AATTTCATTGCAACATCCTT+TGG | 0.320288 | tig0035626:+6093 | Msa1455250:intergenic |
| ATCCCTGATGCAAAGGAAAC+AGG | 0.331509 | tig0035626:-10565 | Msa1455250:CDS |
| GTGTGGCAATGCTTCTGTTC+TGG | 0.335873 | tig0035626:+10953 | Msa1455250:intergenic |
| CAAATCCTGAAATTGTAAAA+AGG | 0.336682 | tig0035626:-13402 | Msa1455250:CDS |
| CACTAACTGCAACATTGATA+TGG | 0.336809 | tig0035626:-10992 | Msa1455250:CDS |
| CCCTTTCATGGGAATTGAAA+AGG | 0.339316 | tig0035626:-14255 | Msa1455250:CDS |
| AGTCTAAAGATATGGGATTA+AGG | 0.341479 | tig0035626:-13877 | Msa1455250:CDS |
| ATTCCAGAGTTTGCAAACTT+TGG | 0.345897 | tig0035626:-9380 | Msa1455250:CDS |
| GCTGTAAAGGACTTCCTGTT+TGG | 0.348577 | tig0035626:-9683 | Msa1455250:CDS |
| GCTGCTATACCTACTGAATC+AGG | 0.351960 | tig0035626:-14044 | Msa1455250:CDS |
| TTCCAGAGTTTGCAAACTTT+GGG | 0.353146 | tig0035626:-9379 | Msa1455250:CDS |
| AACCCTGTTTCCTTTGCATC+AGG | 0.353442 | tig0035626:+10562 | Msa1455250:intergenic |
| AGCTGAGTATTCCCCTTTCA+TGG | 0.357213 | tig0035626:-14267 | Msa1455250:CDS |
| TAATGAGATTGGATTTAATC+AGG | 0.362311 | tig0035626:-5959 | Msa1455250:three_prime_UTR |
| GGTTGGGATTTGACTTCCTT+GGG | 0.363696 | tig0035626:+9506 | Msa1455250:intergenic |
| TAATTGCTGGATTTAATTCT+CGG | 0.364724 | tig0035626:+11292 | Msa1455250:intergenic |
| TCCAAGTGTGTTTAGATAAA+GGG | 0.365379 | tig0035626:+9736 | Msa1455250:intergenic |
| TCTTCTTCTTGTTATTCTCT+GGG | 0.371148 | tig0035626:-14925 | Msa1455250:five_prime_UTR |
| TTTCTTCTCTGCAAGTGGTT+GGG | 0.373606 | tig0035626:+9490 | Msa1455250:intergenic |
| AAGGTGGAGCAATGAGGTTC+AGG | 0.374504 | tig0035626:-13383 | Msa1455250:CDS |
| TGATATCCCGCTTGTCAATC+TGG | 0.376165 | tig0035626:-9654 | Msa1455250:CDS |
| GCTTCGGCCAAGCTCTCCCT+TGG | 0.377356 | tig0035626:+8581 | Msa1455250:intergenic |
| CTTTCTTCTCTGCAAGTGGT+TGG | 0.377425 | tig0035626:+9489 | Msa1455250:intergenic |
| TTGTTGTCGGGTGTATTCAT+AGG | 0.378216 | tig0035626:-6159 | Msa1455250:CDS |
| TAAAGAATTACAAAACTATT+CGG | 0.378988 | tig0035626:-5918 | Msa1455250:three_prime_UTR |
| CCAAGTGTTGGCACTCCCTC+AGG | 0.379387 | tig0035626:+8915 | Msa1455250:intergenic |
| ACCATAGATACTACACTTCC+TGG | 0.389860 | tig0035626:-10393 | Msa1455250:intron |
| AAGTGTATTCCAATAGTTAT+AGG | 0.393001 | tig0035626:+5817 | Msa1455250:intergenic |
| TCATCCACTCGCTCACAATC+AGG | 0.394231 | tig0035626:+8617 | Msa1455250:intergenic |
| CATCACGGTAGCTGAATCTC+AGG | 0.396731 | tig0035626:+14845 | Msa1455250:intergenic |
| TGGTTGGGATTTGACTTCCT+TGG | 0.403046 | tig0035626:+9505 | Msa1455250:intergenic |
| ACATGTGTGTGATCTTGAAT+TGG | 0.404356 | tig0035626:+6182 | Msa1455250:intergenic |
| AGCTGAAGAACAGTAATTGC+TGG | 0.405937 | tig0035626:+11279 | Msa1455250:intergenic |
| TGATATGCATCAGCTGTTGA+TGG | 0.408594 | tig0035626:+9419 | Msa1455250:intergenic |
| TGAATACCAGCTAGAGGATC+TGG | 0.409994 | tig0035626:-8711 | Msa1455250:CDS |
| ACTCTCAAGAAAATCATAGA+AGG | 0.412468 | tig0035626:+11389 | Msa1455250:intergenic |
| TCAGGAAATAATACACAGTC+AGG | 0.414520 | tig0035626:-11420 | Msa1455250:CDS |
| AATGGTGTATCTGATGATAA+AGG | 0.416830 | tig0035626:-13852 | Msa1455250:CDS |
| TTCCCAAAGTTTGCAAACTC+TGG | 0.416924 | tig0035626:+9377 | Msa1455250:intergenic |
| CCTTTCATGGGAATTGAAAA+GGG | 0.417082 | tig0035626:-14254 | Msa1455250:CDS |
| TGGCTAGCGGATAATCTATC+AGG | 0.417740 | tig0035626:-6020 | Msa1455250:exon |
| CTGTAAAGGACTTCCTGTTT+GGG | 0.418816 | tig0035626:-9682 | Msa1455250:CDS |
| TTGTAGGTTATCCGTGAGTC+AGG | 0.424440 | tig0035626:-11438 | Msa1455250:intron |
| ATCTGTCCAGGTGAATCATA+TGG | 0.426484 | tig0035626:+8957 | Msa1455250:intergenic |
| TGCACTGGGTTTGCTGCACC+AGG | 0.428277 | tig0035626:-13323 | Msa1455250:intron |
| TGTATTCATAGGAAATATAA+AGG | 0.434356 | tig0035626:-6148 | Msa1455250:CDS |
| GAATTACAAAACTATTCGGT+TGG | 0.435782 | tig0035626:-5914 | Msa1455250:three_prime_UTR |
| AAAGAAAACTTCTGTGGCTT+CGG | 0.436034 | tig0035626:+13919 | Msa1455250:intergenic |
| ACAGCAGCAAATCTTAAAAC+TGG | 0.438071 | tig0035626:+11237 | Msa1455250:intergenic |
| ACATGTTCTAATAATTGCTC+TGG | 0.438709 | tig0035626:+9133 | Msa1455250:intergenic |
| AAGGCAGCACTCGCAACAAT+TGG | 0.441719 | tig0035626:+13540 | Msa1455250:intergenic |
| CTACACTTCCTGGGAATTGA+AGG | 0.445284 | tig0035626:-10383 | Msa1455250:CDS |
| TCGTGTTTGTGCAGTTGTAC+TGG | 0.450538 | tig0035626:+9158 | Msa1455250:intergenic |
| TTAATCCCATATCTTTAGAC+TGG | 0.453175 | tig0035626:+13879 | Msa1455250:intergenic |
| GTGAGCACACTGGCAAAGTT+TGG | 0.453513 | tig0035626:-10275 | Msa1455250:CDS |
| AATGTTGGGCCTATAACTAT+TGG | 0.461648 | tig0035626:-5826 | Msa1455250:three_prime_UTR |
| TAGATGAATGCCACTGACTA+AGG | 0.465517 | tig0035626:+13521 | Msa1455250:intergenic |
| ACAAAGGCTTACCTTGTTCA+AGG | 0.466919 | tig0035626:+11209 | Msa1455250:intergenic |
| CTTCGGCCAAGCTCTCCCTT+GGG | 0.468883 | tig0035626:+8582 | Msa1455250:intergenic |
| TTTCCTGAGTAACATTCTTA+GGG | 0.469038 | tig0035626:-10650 | Msa1455250:CDS |
| TGCAGTTAGTGACTGATGTT+GGG | 0.469707 | tig0035626:+11004 | Msa1455250:intergenic |
| CCTGAGGGAGTGCCAACACT+TGG | 0.469769 | tig0035626:-8915 | Msa1455250:CDS |
| GGATATCAAATGGCCCAAAC+AGG | 0.470482 | tig0035626:+9669 | Msa1455250:intergenic |
| GATGACAGTATTTACAGCTT+CGG | 0.472343 | tig0035626:+8565 | Msa1455250:intergenic |
| TGGTAGACTAGCAACGATAC+TGG | 0.472490 | tig0035626:-5855 | Msa1455250:three_prime_UTR |
| AATTACAAAACTATTCGGTT+GGG | 0.473266 | tig0035626:-5913 | Msa1455250:three_prime_UTR |
| TGGAAGAGACTTGAGAGGCT+TGG | 0.479961 | tig0035626:+8977 | Msa1455250:intergenic |
| GATATGCATCAGCTGTTGAT+GGG | 0.483197 | tig0035626:+9420 | Msa1455250:intergenic |
| ATGATCCACAATTAGATGCT+AGG | 0.484554 | tig0035626:-14202 | Msa1455250:CDS |
| ATCACACACATGTTTGTTGT+CGG | 0.484824 | tig0035626:-6172 | Msa1455250:CDS |
| TGTCACAAGCTCTCTTATGA+AGG | 0.484923 | tig0035626:-13685 | Msa1455250:CDS |
| ATCAACAGGCACTGGGCTAA+AGG | 0.485148 | tig0035626:+11547 | Msa1455250:intergenic |
| ATGAAACGAATATATTTGCT+AGG | 0.487145 | tig0035626:+10344 | Msa1455250:intergenic |
| TGTGAGCGAGTGGATGAGTA+TGG | 0.487810 | tig0035626:-8611 | Msa1455250:CDS |
| TCACACACATGTTTGTTGTC+GGG | 0.490724 | tig0035626:-6171 | Msa1455250:CDS |
| TGTTCAGGTTATCGTAATTG+TGG | 0.491311 | tig0035626:-9036 | Msa1455250:intron |
| CTTCAGCCTCACCAGTGGTC+GGG | 0.493984 | tig0035626:+8750 | Msa1455250:intergenic |
| TCCTTGACCAATGTTTGTGT+CGG | 0.496168 | tig0035626:-5737 | Msa1455250:three_prime_UTR |
| GATGATGACCGCGACGATGA+AGG | 0.496667 | tig0035626:-14801 | Msa1455250:intron |
| TCTTGGCCCAAGGGAGAGCT+TGG | 0.497009 | tig0035626:-8588 | Msa1455250:CDS |
| TCAGCTTCAGTGAGCTCCAC+AGG | 0.501358 | tig0035626:+9235 | Msa1455250:intergenic |
| CAGTGGCATTCATCTACTAC+AGG | 0.502394 | tig0035626:-13514 | Msa1455250:intron |
| CTAAACACACTTGGAGGTGA+TGG | 0.503784 | tig0035626:-9728 | Msa1455250:CDS |
| CCTACGTCACAAGTCAGAAA+TGG | 0.504171 | tig0035626:-11364 | Msa1455250:CDS |
| CGATACTGGAAGTATAATGT+TGG | 0.504361 | tig0035626:-5841 | Msa1455250:three_prime_UTR |
| TGTAACGAATCAACAGGCAC+TGG | 0.507041 | tig0035626:+11539 | Msa1455250:intergenic |
| GAGGCTTTCTTCTCTGCAAG+TGG | 0.508958 | tig0035626:+9485 | Msa1455250:intergenic |
| GTTGATTCGTTACACAAGTC+AGG | 0.509253 | tig0035626:-11530 | Msa1455250:intron |
| AGCAGATTACACATTGAAAG+TGG | 0.510396 | tig0035626:-8678 | Msa1455250:CDS |
| TGAGACTGATAAAGCTGTAA+AGG | 0.512160 | tig0035626:-9696 | Msa1455250:CDS |
| CTTTATCTAAACACACTTGG+AGG | 0.512500 | tig0035626:-9734 | Msa1455250:CDS |
| GGGCAGTTCTTCAGGAAGCA+AGG | 0.513040 | tig0035626:-14232 | Msa1455250:CDS |
| GAATGAATGCACAACTCACT+CGG | 0.514915 | tig0035626:+14883 | Msa1455250:intergenic |
| AGTAACATTCTTAGGGAAGA+AGG | 0.515461 | tig0035626:-10643 | Msa1455250:CDS |
| CGAGTGGATGAGTATGGTCT+TGG | 0.517300 | tig0035626:-8605 | Msa1455250:CDS |
| CACAAGGCTGCAAGCCAAGA+AGG | 0.517906 | tig0035626:+8540 | Msa1455250:intergenic |
| TTAGAAAATTTCCCAAGTGT+TGG | 0.518435 | tig0035626:+8903 | Msa1455250:intergenic |
| TTTGTACAGTTTCATGCACT+GGG | 0.519283 | tig0035626:-13337 | Msa1455250:CDS |
| TTGACAAGCGGGATATCAAA+TGG | 0.520695 | tig0035626:+9659 | Msa1455250:intergenic |
| TCTTGGCTTGCAGCCTTGTG+AGG | 0.521858 | tig0035626:-8537 | Msa1455250:intron |
| AGATGCTAGGAGATGCTCAC+AGG | 0.523187 | tig0035626:-14189 | Msa1455250:intron |
| TGCCAGTGTGCTCACAGCAC+CGG | 0.525008 | tig0035626:+10283 | Msa1455250:intergenic |
| ACCCTTTATCTAAACACACT+TGG | 0.526555 | tig0035626:-9737 | Msa1455250:CDS |
| AGCTTGTTAGCAGCTTGACA+AGG | 0.527263 | tig0035626:-11585 | Msa1455250:CDS |
| CAGGAATGCATGGGAAAGCA+TGG | 0.529009 | tig0035626:-8642 | Msa1455250:CDS |
| CTTCCCTAAGAATGTTACTC+AGG | 0.529688 | tig0035626:+10647 | Msa1455250:intergenic |
| TTGCAGTTAGTGACTGATGT+TGG | 0.530937 | tig0035626:+11003 | Msa1455250:intergenic |
| TTTCAGGTTGACCCGACCAC+TGG | 0.531469 | tig0035626:-8761 | Msa1455250:intron |
| AATACCGCTCAATTTGTGCC+AGG | 0.533594 | tig0035626:+13589 | Msa1455250:intergenic |
| TCCCTGATGCAAAGGAAACA+GGG | 0.533650 | tig0035626:-10564 | Msa1455250:CDS |
| TATCTAATTTCAGGAATGCA+TGG | 0.536835 | tig0035626:-8652 | Msa1455250:CDS |
| AGATATGGGATTAAGGAGAA+TGG | 0.538106 | tig0035626:-13870 | Msa1455250:CDS |
| GATACTGGAAGTATAATGTT+GGG | 0.538272 | tig0035626:-5840 | Msa1455250:three_prime_UTR |
| CGATCTCCAGATCCTCTAGC+TGG | 0.539710 | tig0035626:+8705 | Msa1455250:intergenic |
| GCTAGCCACAATCTCATGAA+TGG | 0.540300 | tig0035626:+6035 | Msa1455250:intergenic |
| TCTTCAGCCTCACCAGTGGT+CGG | 0.543872 | tig0035626:+8749 | Msa1455250:intergenic |
| TGCAGATACGACAGAATGAT+CGG | 0.545783 | tig0035626:-11621 | Msa1455250:intron |
| GGCAGTTCTTCAGGAAGCAA+GGG | 0.545910 | tig0035626:-14231 | Msa1455250:CDS |
| TATCACAGACGGAACCCTCC+TGG | 0.546089 | tig0035626:-13607 | Msa1455250:CDS |
| ATCACTGACAGTTTCATCCT+CGG | 0.547476 | tig0035626:+6059 | Msa1455250:intergenic |
| GACTTGTGTAACGAATCAAC+AGG | 0.547682 | tig0035626:+11533 | Msa1455250:intergenic |
| ATGAGTATGGTCTTGGCCCA+AGG | 0.547932 | tig0035626:-8598 | Msa1455250:CDS |
| TGAAACGAATATATTTGCTA+GGG | 0.549359 | tig0035626:+10345 | Msa1455250:intergenic |
| TCATCATCTTTCTTCACGAG+TGG | 0.549801 | tig0035626:+14816 | Msa1455250:intergenic |
| AAAGTTTGCAAACTCTGGAA+TGG | 0.551843 | tig0035626:+9382 | Msa1455250:intergenic |
| TGCTGTTCGCACCTTGAACA+AGG | 0.552650 | tig0035626:-11220 | Msa1455250:intron |
| TTACCAGTCCTCAGCGCCTG+TGG | 0.552709 | tig0035626:-9251 | Msa1455250:intron |
| ACCCTGTTTCCTTTGCATCA+GGG | 0.556360 | tig0035626:+10563 | Msa1455250:intergenic |
| ATGTCAAAAGCCTCTTCTGA+AGG | 0.557152 | tig0035626:+9539 | Msa1455250:intergenic |
| TAGTCTCCAGATTGACAAGC+GGG | 0.559078 | tig0035626:+9648 | Msa1455250:intergenic |
| GTGTATTATTTCCTGACTCA+CGG | 0.561221 | tig0035626:+11427 | Msa1455250:intergenic |
| CATGTGTGTGATCTTGAATT+GGG | 0.562867 | tig0035626:+6183 | Msa1455250:intergenic |
| GCTGAGTATTCCCCTTTCAT+GGG | 0.563911 | tig0035626:-14266 | Msa1455250:CDS |
| TAGAGAAATCCCTGATGCAA+AGG | 0.564716 | tig0035626:-10572 | Msa1455250:CDS |
| GCAGATTACACATTGAAAGT+GGG | 0.566190 | tig0035626:-8677 | Msa1455250:CDS |
| GAATAACAAGAAGAAGAAGA+AGG | 0.566843 | tig0035626:+14931 | Msa1455250:intergenic |
| CACCACTGGCTTACCTCACA+AGG | 0.566963 | tig0035626:+8524 | Msa1455250:intergenic |
| AGTCTACCAAGAATGCAGTA+AGG | 0.567615 | tig0035626:+5869 | Msa1455250:intergenic |
| CATCCACTCGCTCACAATCA+GGG | 0.568503 | tig0035626:+8618 | Msa1455250:intergenic |
| ATCTAATTTCAGGAATGCAT+GGG | 0.569745 | tig0035626:-8651 | Msa1455250:CDS |
| CCGCTCAATTTGTGCCAGGA+GGG | 0.571229 | tig0035626:+13593 | Msa1455250:intergenic |
| TGACATTGATTCTGTGCCCA+AGG | 0.571264 | tig0035626:-9522 | Msa1455250:CDS |
| CCATAGATACTACACTTCCT+GGG | 0.571583 | tig0035626:-10392 | Msa1455250:intron |
| CACGAGTGGTTGAGCCATCA+CGG | 0.572119 | tig0035626:+14830 | Msa1455250:intergenic |
| TGAGTATGGTCTTGGCCCAA+GGG | 0.575644 | tig0035626:-8597 | Msa1455250:CDS |
| CTCTCAAGAAAATCATAGAA+GGG | 0.578640 | tig0035626:+11390 | Msa1455250:intergenic |
| CTTGCAGAGAAGAAAGCCTC+TGG | 0.580181 | tig0035626:-9482 | Msa1455250:CDS |
| CATCTCCTAGCATCTAATTG+TGG | 0.589567 | tig0035626:+14197 | Msa1455250:intergenic |
| GTTTGCAAACTCTGGAATGG+AGG | 0.589800 | tig0035626:+9385 | Msa1455250:intergenic |
| AAGTGTAGTAATAGCAAGTG+TGG | 0.589942 | tig0035626:+10936 | Msa1455250:intergenic |
| ATTACAGGAGCCTTCAGAAG+AGG | 0.591072 | tig0035626:-9549 | Msa1455250:intron |
| TCTGAAGTTTATTGTTCGAG+AGG | 0.592844 | tig0035626:-8877 | Msa1455250:intron |
| GAGAATGCAACAGTGAGGGC+CGG | 0.593593 | tig0035626:-10302 | Msa1455250:CDS |
| CTGCTATACCTACTGAATCA+GGG | 0.594281 | tig0035626:-14043 | Msa1455250:CDS |
| CTGAGGGAGTGCCAACACTT+GGG | 0.595169 | tig0035626:-8914 | Msa1455250:CDS |
| TCTTGAGAATGCAACAGTGA+GGG | 0.598523 | tig0035626:-10306 | Msa1455250:CDS |
| GTCTACCAAGAATGCAGTAA+GGG | 0.599744 | tig0035626:+5870 | Msa1455250:intergenic |
| GCTTGTTAGCAGCTTGACAA+GGG | 0.599912 | tig0035626:-11584 | Msa1455250:CDS |
| GACAGGAAATGAATCAAGTG+TGG | 0.601757 | tig0035626:-10908 | Msa1455250:CDS |
| CTGAGATTCAGCTACCGTGA+TGG | 0.604195 | tig0035626:-14844 | Msa1455250:exon |
| AATGAATGCACAACTCACTC+GGG | 0.605082 | tig0035626:+14884 | Msa1455250:intergenic |
| ACCGCTCAATTTGTGCCAGG+AGG | 0.606317 | tig0035626:+13592 | Msa1455250:intergenic |
| GTAACGAATCAACAGGCACT+GGG | 0.608764 | tig0035626:+11540 | Msa1455250:intergenic |
| CAAGTCACCTCGTCTGCAGA+GGG | 0.609015 | tig0035626:+13821 | Msa1455250:intergenic |
| GGAGGAGCACCCAAACCAGT+TGG | 0.609607 | tig0035626:+9452 | Msa1455250:intergenic |
| ACAAGTCACCTCGTCTGCAG+AGG | 0.609964 | tig0035626:+13820 | Msa1455250:intergenic |
| GCCGACACAAACATTGGTCA+AGG | 0.610770 | tig0035626:+5736 | Msa1455250:intergenic |
| CAGATTACACATTGAAAGTG+GGG | 0.612267 | tig0035626:-8676 | Msa1455250:CDS |
| TCTCTTCCATATGATTCACC+TGG | 0.612987 | tig0035626:-8963 | Msa1455250:CDS |
| AGGAATGCATGGGAAAGCAT+GGG | 0.615686 | tig0035626:-8641 | Msa1455250:CDS |
| AAGTCTCTCCCTGATTCAGT+AGG | 0.615879 | tig0035626:+14035 | Msa1455250:intergenic |
| GAAATATAAAGGTGCTTGTG+CGG | 0.616618 | tig0035626:-6137 | Msa1455250:CDS |
| GTGGCATTTGAGAAGCCTGA+GGG | 0.617748 | tig0035626:-8930 | Msa1455250:CDS |
| ACTGGTGAGGCTGAAGATGA+TGG | 0.618692 | tig0035626:-8743 | Msa1455250:CDS |
| ATATGCATCAGCTGTTGATG+GGG | 0.619854 | tig0035626:+9421 | Msa1455250:intergenic |
| AGAGCTATTACAGAGCTCAA+TGG | 0.619862 | tig0035626:-11324 | Msa1455250:CDS |
| GATATCTCCCTCTGCAGACG+AGG | 0.620675 | tig0035626:-13828 | Msa1455250:intron |
| CAGGAAATAATACACAGTCA+GGG | 0.625927 | tig0035626:-11419 | Msa1455250:CDS |
| GATACGACACAGCACTCGAA+TGG | 0.627712 | tig0035626:+13626 | Msa1455250:intergenic |
| CTTTCATGGGAATTGAAAAG+GGG | 0.630111 | tig0035626:-14253 | Msa1455250:CDS |
| GGTTTGGGTGCTCCTCCAAG+TGG | 0.630511 | tig0035626:-9446 | Msa1455250:CDS |
| AACATTCTTAGGGAAGAAGG+TGG | 0.632595 | tig0035626:-10640 | Msa1455250:CDS |
| TGTTAGCAGCTTGACAAGGG+GGG | 0.633188 | tig0035626:-11581 | Msa1455250:CDS |
| GGGCCCTGATTGTGAGCGAG+TGG | 0.633246 | tig0035626:-8621 | Msa1455250:CDS |
| TGATGCCATTCATGAGATTG+TGG | 0.633282 | tig0035626:-6040 | Msa1455250:CDS |
| CTTGTTAGCAGCTTGACAAG+GGG | 0.635426 | tig0035626:-11583 | Msa1455250:CDS |
| AGTGAGCTCCACAGGCGCTG+AGG | 0.636968 | tig0035626:+9243 | Msa1455250:intergenic |
| CAAGAAAATCATAGAAGGGG+CGG | 0.644100 | tig0035626:+11394 | Msa1455250:intergenic |
| CCCTCCTGGCACAAATTGAG+CGG | 0.644481 | tig0035626:-13593 | Msa1455250:CDS |
| TCATATGGAAGAGACTTGAG+AGG | 0.644642 | tig0035626:+8972 | Msa1455250:intergenic |
| AGGAAATAATACACAGTCAG+GGG | 0.645045 | tig0035626:-11418 | Msa1455250:CDS |
| TGAATTGGGTGGAACAACCT+CGG | 0.646733 | tig0035626:+6197 | Msa1455250:intergenic |
| TACACTTCCTGGGAATTGAA+GGG | 0.647378 | tig0035626:-10382 | Msa1455250:CDS |
| TCTCAAGAAAATCATAGAAG+GGG | 0.647603 | tig0035626:+11391 | Msa1455250:intergenic |
| GGTTGACCCGACCACTGGTG+AGG | 0.653086 | tig0035626:-8756 | Msa1455250:CDS |
| CCATTTCTGACTTGTGACGT+AGG | 0.654222 | tig0035626:+11364 | Msa1455250:intergenic |
| TTGTTAGCAGCTTGACAAGG+GGG | 0.655135 | tig0035626:-11582 | Msa1455250:CDS |
| TGTGGCATTTGAGAAGCCTG+AGG | 0.655854 | tig0035626:-8931 | Msa1455250:CDS |
| GAAATTGACTGTCAGATCCG+AGG | 0.656407 | tig0035626:-6076 | Msa1455250:CDS |
| ATCATCTTCAGCCTCACCAG+TGG | 0.659428 | tig0035626:+8745 | Msa1455250:intergenic |
| TGAAGATGAATACCAGCTAG+AGG | 0.659647 | tig0035626:-8717 | Msa1455250:CDS |
| GGCCGGTGCTGTGAGCACAC+TGG | 0.659994 | tig0035626:-10285 | Msa1455250:CDS |
| GACAGCAAAGAAAACTTCTG+TGG | 0.662155 | tig0035626:+13913 | Msa1455250:intergenic |
| GTGTGTGATCTTGAATTGGG+TGG | 0.662717 | tig0035626:+6186 | Msa1455250:intergenic |
| GTGGGCTGTGCAGGGTACCG+AGG | 0.663992 | tig0035626:-6214 | Msa1455250:intron |
| CTTAGCAAAACAAATATGCG+CGG | 0.667793 | tig0035626:+10114 | Msa1455250:intergenic |
| GTGCTGTGTCGTATCACAGA+CGG | 0.669972 | tig0035626:-13618 | Msa1455250:CDS |
| ATCACGGTAGCTGAATCTCA+GGG | 0.672400 | tig0035626:+14846 | Msa1455250:intergenic |
| TTTCATGGGAATTGAAAAGG+GGG | 0.673800 | tig0035626:-14252 | Msa1455250:CDS |
| GCGAGTGCTGCCTTAGTCAG+TGG | 0.676555 | tig0035626:-13531 | Msa1455250:CDS |
| ATCTTGAGAATGCAACAGTG+AGG | 0.681270 | tig0035626:-10307 | Msa1455250:CDS |
| CTAGTCTCCAGATTGACAAG+CGG | 0.684081 | tig0035626:+9647 | Msa1455250:intergenic |
| ATTCATGAGATTGTGGCTAG+CGG | 0.684649 | tig0035626:-6033 | Msa1455250:CDS |
| AGATTACACATTGAAAGTGG+GGG | 0.686745 | tig0035626:-8675 | Msa1455250:CDS |
| GTTCACTTATCTGTCTACGC+AGG | 0.694862 | tig0035626:-10506 | Msa1455250:intron |
| TATGCATCAGCTGTTGATGG+GGG | 0.711908 | tig0035626:+9422 | Msa1455240:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTAAAATTTTAAAAATA+TGG | - | tig0035626:10760-10779 | Msa1455250:intron | 0.0% |
| !!! | AAAATTTTAATAAATTGCAT+GGG | + | tig0035626:7717-7736 | Msa1455250:intergenic | 10.0% |
| !! | AATAAAATATATTTCACATT+AGG | + | tig0035626:7800-7819 | Msa1455250:intergenic | 10.0% |
| !!! | ATTAGTATAAATTCTAAAAA+GGG | - | tig0035626:8977-8996 | Msa1455250:CDS | 10.0% |
| !! | AAAAATATATACCATTATAA+AGG | + | tig0035626:12632-12651 | Msa1455250:intergenic | 10.0% |
| !! | TAAAATAAAAAATAAACACA+AGG | - | tig0035626:12858-12877 | Msa1455250:intron | 10.0% |
| !!! | AAAAAAAGAATTAAATTTTG+CGG | - | tig0035626:12889-12908 | Msa1455250:intron | 10.0% |
| !!! | GAAATATATTTTAATTGTAT+TGG | + | tig0035626:14235-14254 | Msa1455250:intergenic | 10.0% |
| !!! | TATAGTTTTTTAGATTTGTA+TGG | - | tig0035626:6864-6883 | Msa1455250:intron | 15.0% |
| !!! | GTGTTTTTTTCTTATAAATT+GGG | + | tig0035626:7623-7642 | Msa1455250:intergenic | 15.0% |
| !!! | AGTGTTTTTTTCTTATAAAT+TGG | + | tig0035626:7624-7643 | Msa1455250:intergenic | 15.0% |
| !!! | AAATTTTAATAAATTGCATG+GGG | + | tig0035626:7716-7735 | Msa1455250:intergenic | 15.0% |
| !!! | GAAAATTTTAATAAATTGCA+TGG | + | tig0035626:7718-7737 | Msa1455250:intergenic | 15.0% |
| !! | TACATTAAATATCTTAAAGA+AGG | - | tig0035626:7925-7944 | Msa1455250:intron | 15.0% |
| !! | ACATTAAATATCTTAAAGAA+GGG | - | tig0035626:7926-7945 | Msa1455250:intron | 15.0% |
| !!! | TCTAGAATATTAATAAGAAT+TGG | - | tig0035626:7983-8002 | Msa1455250:intron | 15.0% |
| !!! | ATCTTTTTTTGCTTATAAAT+TGG | - | tig0035626:8036-8055 | Msa1455250:intron | 15.0% |
| !!! | TCTTTTTTTGCTTATAAATT+GGG | - | tig0035626:8037-8056 | Msa1455250:intron | 15.0% |
| !!! | CATTAGTATAAATTCTAAAA+AGG | - | tig0035626:8976-8995 | Msa1455250:CDS | 15.0% |
| !! | CAAATATTATGAGAATATTT+AGG | + | tig0035626:9552-9571 | Msa1455250:intergenic | 15.0% |
| !!! | TAGTAGTTTTATAATACTTT+TGG | - | tig0035626:10461-10480 | Msa1455250:intron | 15.0% |
| !!! | AGTAGTTTTATAATACTTTT+GGG | - | tig0035626:10462-10481 | Msa1455250:intron | 15.0% |
| !!! | AATTGCTTTTTTTTTATGTA+TGG | - | tig0035626:10853-10872 | Msa1455250:CDS | 15.0% |
| !! | TAATAAAATATGGTTTATCA+TGG | + | tig0035626:12272-12291 | Msa1455250:intergenic | 15.0% |
| !!! | GCAATTAGTTTAATAAAATA+TGG | + | tig0035626:12282-12301 | Msa1455250:intergenic | 15.0% |
| !!! | AACCATTTTTCAATAAAAAA+AGG | - | tig0035626:13487-13506 | Msa1455250:intron | 15.0% |
| !!! | TACCTTTTTTTATTGAAAAA+TGG | + | tig0035626:13492-13511 | Msa1455250:intergenic | 15.0% |
| !!! | CAAATAAACAAGATTATTTT+TGG | + | tig0035626:13685-13704 | Msa1455250:intergenic | 15.0% |
| !!! | TATCTTCTAATTTTTATTTG+TGG | - | tig0035626:14414-14433 | Msa1455250:intron | 15.0% |
| !!! | ATCTTCTAATTTTTATTTGT+GGG | - | tig0035626:14415-14434 | Msa1455250:intron | 15.0% |
| !! | TAAAGAATTACAAAACTATT+CGG | - | tig0035626:14729-14748 | Msa1455250:intron | 15.0% |
| !!! | TTAATGTAATATGAATTTTG+AGG | - | tig0035626:14883-14902 | Msa1455250:five_prime_UTR | 15.0% |
| !!! | TTAAGTACATTTCTTTTAAG+AGG | - | tig0035626:7524-7543 | Msa1455250:intron | 20.0% |
| !!! | TTTTTTCTTATAAATTGGGA+CGG | + | tig0035626:7619-7638 | Msa1455250:intergenic | 20.0% |
| !!! | AATTTTAATAAATTGCATGG+GGG | + | tig0035626:7715-7734 | Msa1455250:intergenic | 20.0% |
| !! | CTTGAAACTAAATAAACATA+TGG | + | tig0035626:7771-7790 | Msa1455250:intergenic | 20.0% |
| !! | TGTATAAATAATTAATGCAG+AGG | + | tig0035626:7825-7844 | Msa1455250:intergenic | 20.0% |
| !! | GTGTTAATTATAATATGCAT+CGG | + | tig0035626:7851-7870 | Msa1455250:intergenic | 20.0% |
| !! | AATTTGCCAAAAATATAACT+AGG | + | tig0035626:7964-7983 | Msa1455250:intergenic | 20.0% |
| !! | GAATATTAATAAGAATTGGT+TGG | - | tig0035626:7987-8006 | Msa1455250:intron | 20.0% |
| !!! | TAAATTGAATTTTTCCATCA+TGG | + | tig0035626:8852-8871 | Msa1455250:intergenic | 20.0% |
| !!! | AAACATTTAGAGAAGTATTA+CGG | + | tig0035626:8888-8907 | Msa1455250:intergenic | 20.0% |
| !! | CTATCTTCTATTATATTTGT+AGG | - | tig0035626:9193-9212 | Msa1455250:CDS | 20.0% |
| !! | AAACGAAATACTTATTCAAT+GGG | + | tig0035626:9518-9537 | Msa1455250:intergenic | 20.0% |
| !! | AAAACGAAATACTTATTCAA+TGG | + | tig0035626:9519-9538 | Msa1455250:intergenic | 20.0% |
| !!! | TTTGTTATTTTAATTGAGTG+CGG | - | tig0035626:9590-9609 | Msa1455250:intron | 20.0% |
| !!! | ACAGAGATCTATATTTTAAT+GGG | + | tig0035626:9862-9881 | Msa1455250:intergenic | 20.0% |
| !!! | TACAGAGATCTATATTTTAA+TGG | + | tig0035626:9863-9882 | Msa1455250:intergenic | 20.0% |
| !!! | GTAGTTTTATAATACTTTTG+GGG | - | tig0035626:10463-10482 | Msa1455250:intron | 20.0% |
| !!! | GATGAGATTTTAAATTAAGT+TGG | + | tig0035626:10500-10519 | Msa1455250:intergenic | 20.0% |
| !! | AATAGAAAATCATCTTCTTT+CGG | + | tig0035626:10811-10830 | Msa1455250:intergenic | 20.0% |
| !! | TTGAAAAATTATGTAAGTCT+TGG | - | tig0035626:11024-11043 | Msa1455250:intron | 20.0% |
| !! | AATTATATATATCCTTGTTC+AGG | - | tig0035626:11596-11615 | Msa1455250:CDS | 20.0% |
| !! | ATAAAAATCCCATAAATAGA+GGG | + | tig0035626:11804-11823 | Msa1455250:intergenic | 20.0% |
| !! | AATAAAAATCCCATAAATAG+AGG | + | tig0035626:11805-11824 | Msa1455250:intergenic | 20.0% |
| !!! | ATATTTCAAGTGTAAAATCT+CGG | - | tig0035626:11851-11870 | Msa1455250:intron | 20.0% |
| !! | GACATAAATGCTAAATAAAA+TGG | + | tig0035626:12180-12199 | Msa1455250:intergenic | 20.0% |
| !! | AAATAACTCTACCTTTATAA+TGG | - | tig0035626:12618-12637 | Msa1455250:intron | 20.0% |
| !!! | CTAAAGCAAATTTTATAATG+AGG | - | tig0035626:12830-12849 | Msa1455250:intron | 20.0% |
| !! | CAAACTTATGGTATAAAAAA+AGG | + | tig0035626:13137-13156 | Msa1455250:intergenic | 20.0% |
| !!! | ATTTTAATGTTTTGTACTCA+GGG | + | tig0035626:13194-13213 | Msa1455250:intergenic | 20.0% |
| !!! | ATAAACAAGATTATTTTTGG+TGG | + | tig0035626:13682-13701 | Msa1455250:intergenic | 20.0% |
| !!! | TTTAGTCCCATATATTTTAT+TGG | + | tig0035626:13959-13978 | Msa1455250:intergenic | 20.0% |
| !! | AAATAAAAATATCAGCAACA+AGG | - | tig0035626:13994-14013 | Msa1455250:intron | 20.0% |
| !! | TTTCTTTCTAAACATAAGTT+CGG | - | tig0035626:14199-14218 | Msa1455250:CDS | 20.0% |
| !! | TGTATTCATAGGAAATATAA+AGG | - | tig0035626:14499-14518 | Msa1455250:intron | 20.0% |
| !!! | AGATAAATTTTGATTCAAGA+TGG | - | tig0035626:14651-14670 | Msa1455250:intron | 20.0% |
| !! | AATCTCATTAACAAAAAAGA+GGG | + | tig0035626:14678-14697 | Msa1455250:intergenic | 20.0% |
| !! | AAAAATGAAGTATAATCATG+AGG | + | tig0035626:14856-14875 | Msa1455250:intergenic | 20.0% |
| !! | AATTGATTTCGATTCGTTAT+TGG | - | tig0035626:6007-6026 | Msa1455250:three_prime_UTR | 25.0% |
| !! | ATTGTTGCTAATTGTGATTT+TGG | - | tig0035626:6344-6363 | Msa1455250:intron | 25.0% |
| ! | AATAACCTAGAAATTAGAGA+TGG | + | tig0035626:6578-6597 | Msa1455250:intergenic | 25.0% |
| !! | CTATTTCTTTGATCTTGTAA+AGG | - | tig0035626:6932-6951 | Msa1455250:intron | 25.0% |
| ! | ACAGAATTACAAATAGAACT+CGG | + | tig0035626:7164-7183 | Msa1455250:intergenic | 25.0% |
| ! | CAAATCCTGAAATTGTAAAA+AGG | - | tig0035626:7245-7264 | Msa1455250:intron | 25.0% |
| !! | GTCTCTTTTGCTTATAATTT+GGG | + | tig0035626:7654-7673 | Msa1455250:intergenic | 25.0% |
| ! | TTGGAACAATAGAATTAAGT+AGG | + | tig0035626:7687-7706 | Msa1455250:intergenic | 25.0% |
| ! | TAAACATATGGATGATTCAT+CGG | + | tig0035626:7759-7778 | Msa1455250:intergenic | 25.0% |
| !! | TTTTTGCTTATAAATTGGGA+CGG | - | tig0035626:8041-8060 | Msa1455250:intron | 25.0% |
| ! | AACTGTTAAGAAAGAATTAG+AGG | - | tig0035626:8463-8482 | Msa1455250:intron | 25.0% |
| ! | AAGAAAGAATTAGAGGTTAA+TGG | - | tig0035626:8470-8489 | Msa1455250:intron | 25.0% |
| !! | TATCTATATTGCTGTTGAAA+TGG | - | tig0035626:8710-8729 | Msa1455250:CDS | 25.0% |
| !! | ATTATCATCGCTGTAAATTT+TGG | - | tig0035626:8765-8784 | Msa1455250:intron | 25.0% |
| ! | GTAATTATCTTGTTGAATTC+TGG | - | tig0035626:8815-8834 | Msa1455250:intron | 25.0% |
| !! | TAAATTCTAAAAAGGGTTTG+TGG | - | tig0035626:8984-9003 | Msa1455250:CDS | 25.0% |
| ! | TAATTGCTGGATTTAATTCT+CGG | + | tig0035626:9358-9377 | Msa1455250:intergenic | 25.0% |
| !! | AAAATTTGAGTTATCGACAA+AGG | + | tig0035626:9457-9476 | Msa1455250:intergenic | 25.0% |
| ! | AACGAAATACTTATTCAATG+GGG | + | tig0035626:9517-9536 | Msa1455250:intergenic | 25.0% |
| ! | TATTCTCATAATATTTGCCT+TGG | - | tig0035626:9555-9574 | Msa1455250:intron | 25.0% |
| !!! | TATATTTTAATGGGAACTTC+TGG | + | tig0035626:9853-9872 | Msa1455250:intergenic | 25.0% |
| ! | TATGCAAGATATAGAATTTG+AGG | + | tig0035626:9912-9931 | Msa1455250:intergenic | 25.0% |
| ! | ATAATTTATACCACTCGTTA+AGG | + | tig0035626:9944-9963 | Msa1455250:intergenic | 25.0% |
| !! | TGAAACGAATATATTTGCTA+GGG | + | tig0035626:10305-10324 | Msa1455250:intergenic | 25.0% |
| ! | ATGAAACGAATATATTTGCT+AGG | + | tig0035626:10306-10325 | Msa1455250:intergenic | 25.0% |
| !!! | TAATACTTTTGGGGAATATT+TGG | - | tig0035626:10472-10491 | Msa1455250:intron | 25.0% |
| ! | TCTCAAAAAATGCATCATAA+AGG | + | tig0035626:10601-10620 | Msa1455250:intergenic | 25.0% |
| !! | AGAAGATGATTTTCTATTTC+TGG | - | tig0035626:10813-10832 | Msa1455250:CDS | 25.0% |
| !!! | TGGTATTTTGATTTATTTGC+AGG | - | tig0035626:10873-10892 | Msa1455250:CDS | 25.0% |
| !!! | TTTGTTTTTTGTTCCTTCAA+TGG | - | tig0035626:11338-11357 | Msa1455250:CDS | 25.0% |
| ! | TATATTGTATTAGCCATTGA+AGG | + | tig0035626:11354-11373 | Msa1455250:intergenic | 25.0% |
| !! | TCGTTAAACACATTTTTGAT+AGG | - | tig0035626:11455-11474 | Msa1455250:intron | 25.0% |
| ! | ATATAATTACAAACAAGACC+TGG | + | tig0035626:11584-11603 | Msa1455250:intergenic | 25.0% |
| ! | TAAAAATCCCATAAATAGAG+GGG | + | tig0035626:11803-11822 | Msa1455250:intergenic | 25.0% |
| !! | TATTAATAGGCTAGTTAAGT+TGG | - | tig0035626:12508-12527 | Msa1455250:intron | 25.0% |
| !!! | GTTGGTTGATATAAAGATTT+TGG | - | tig0035626:12526-12545 | Msa1455250:intron | 25.0% |
| ! | ATTATAGTGCTGTACTTTAT+AGG | - | tig0035626:12762-12781 | Msa1455250:intron | 25.0% |
| ! | TAAAGATTTGATCCTAAGTA+TGG | - | tig0035626:12915-12934 | Msa1455250:intron | 25.0% |
| ! | TTCTATCAAAAACCATACTT+AGG | + | tig0035626:12930-12949 | Msa1455250:intergenic | 25.0% |
| !! | AACCAAATTGAATTTTCTTG+AGG | - | tig0035626:13111-13130 | Msa1455250:intron | 25.0% |
| !!! | GATTTTAATGTTTTGTACTC+AGG | + | tig0035626:13195-13214 | Msa1455250:intergenic | 25.0% |
| !!! | TCGTTTTTCCAAAGATTATT+GGG | + | tig0035626:13712-13731 | Msa1455250:intergenic | 25.0% |
| !!! | ATCGTTTTTCCAAAGATTAT+TGG | + | tig0035626:13713-13732 | Msa1455250:intergenic | 25.0% |
| ! | TCATTGACAACTAATCTAAT+TGG | - | tig0035626:13738-13757 | Msa1455250:intron | 25.0% |
| !! | TTTGGTTTCAAAATCCAAAA+TGG | + | tig0035626:13793-13812 | Msa1455250:intergenic | 25.0% |
| ! | ATGCAAGCCAATAAAATATA+TGG | - | tig0035626:13949-13968 | Msa1455250:intron | 25.0% |
| ! | TGCAAGCCAATAAAATATAT+GGG | - | tig0035626:13950-13969 | Msa1455250:intron | 25.0% |
| ! | TGTTAAGTGAAGATAAAGAA+TGG | - | tig0035626:14097-14116 | Msa1455250:intron | 25.0% |
| ! | AGATAGATAGGAAAGAAAAT+GGG | + | tig0035626:14261-14280 | Msa1455250:intergenic | 25.0% |
| !!! | ACCAATAATATTTTAGAGTG+GGG | + | tig0035626:14359-14378 | Msa1455250:intergenic | 25.0% |
| !!! | CACCAATAATATTTTAGAGT+GGG | + | tig0035626:14360-14379 | Msa1455250:intergenic | 25.0% |
| !!! | ACACCAATAATATTTTAGAG+TGG | + | tig0035626:14361-14380 | Msa1455250:intergenic | 25.0% |
| ! | ATCTCATTAACAAAAAAGAG+GGG | + | tig0035626:14677-14696 | Msa1455250:intergenic | 25.0% |
| ! | CAATCTCATTAACAAAAAAG+AGG | + | tig0035626:14679-14698 | Msa1455250:intergenic | 25.0% |
| !!! | CTCTTTTTTGTTAATGAGAT+TGG | - | tig0035626:14677-14696 | Msa1455250:intron | 25.0% |
| ! | TAATGAGATTGGATTTAATC+AGG | - | tig0035626:14688-14707 | Msa1455250:intron | 25.0% |
| ! | AATTACAAAACTATTCGGTT+GGG | - | tig0035626:14734-14753 | Msa1455250:intron | 25.0% |
| ! | AAGTGTATTCCAATAGTTAT+AGG | + | tig0035626:14833-14852 | Msa1455250:intergenic | 25.0% |
| GAATAACAAGAAGAAGAAGA+AGG | + | tig0035626:5719-5738 | Msa1203530:intergenic | 30.0% | |
| !! | TTCTTCTTCTTGTTATTCTC+TGG | - | tig0035626:5721-5740 | Msa1455250:three_prime_UTR | 30.0% |
| !! | TCTTCTTCTTGTTATTCTCT+GGG | - | tig0035626:5722-5741 | Msa1455250:three_prime_UTR | 30.0% |
| AATACTACAGAAACGAGAAT+TGG | + | tig0035626:5962-5981 | Msa1455250:intergenic | 30.0% | |
| !!! | GTGTATAGATCTTTTAGCTT+TGG | - | tig0035626:6300-6319 | Msa1455250:intron | 30.0% |
| ! | AGGTTTTTATCTTCAGCTAA+AGG | - | tig0035626:6478-6497 | Msa1455250:intron | 30.0% |
| CAGCATCAAAATTCAAATTC+TGG | + | tig0035626:6544-6563 | Msa1455250:intergenic | 30.0% | |
| TATTGCCATCTCTAATTTCT+AGG | - | tig0035626:6570-6589 | Msa1455250:intron | 30.0% | |
| TAAATCTTCGTGCTTATTTG+TGG | - | tig0035626:6645-6664 | Msa1455250:intron | 30.0% | |
| ! | CTTTTCCAGTCTAAAGATAT+GGG | - | tig0035626:6763-6782 | Msa1455250:intron | 30.0% |
| TTAATCCCATATCTTTAGAC+TGG | + | tig0035626:6771-6790 | Msa1455250:intergenic | 30.0% | |
| AGTCTAAAGATATGGGATTA+AGG | - | tig0035626:6770-6789 | Msa1455250:intron | 30.0% | |
| AATGGTGTATCTGATGATAA+AGG | - | tig0035626:6795-6814 | Msa1455250:intron | 30.0% | |
| ATCCTGAAATTGTAAAAAGG+TGG | - | tig0035626:7248-7267 | Msa1455250:intron | 30.0% | |
| ! | GGTCTCTTTTGCTTATAATT+TGG | + | tig0035626:7655-7674 | Msa1455250:intergenic | 30.0% |
| GAATTAAGTAGGTCAAAAGT+GGG | + | tig0035626:7676-7695 | Msa1455250:intergenic | 30.0% | |
| AGAATTAAGTAGGTCAAAAG+TGG | + | tig0035626:7677-7696 | Msa1455250:intergenic | 30.0% | |
| TAACACTACATATGCTTCTA+TGG | - | tig0035626:7865-7884 | Msa1455250:intron | 30.0% | |
| GAAGCATAATTATACCTCTA+CGG | + | tig0035626:7898-7917 | Msa1455250:intergenic | 30.0% | |
| ATCTTAAAGAAGGGTAGTTT+AGG | - | tig0035626:7935-7954 | Msa1455250:intron | 30.0% | |
| ! | AGGAAGCCTAGTTATATTTT+TGG | - | tig0035626:7955-7974 | Msa1455250:intron | 30.0% |
| !!! | TTGTATCATGCTGACTTTTA+TGG | - | tig0035626:8079-8098 | Msa1455250:intron | 30.0% |
| TGTCATTGCATTAAGAATGT+GGG | + | tig0035626:8261-8280 | Msa1455250:intergenic | 30.0% | |
| TTGTCATTGCATTAAGAATG+TGG | + | tig0035626:8262-8281 | Msa1455250:intergenic | 30.0% | |
| ! | TCAACCATCTTTTCTACAAT+GGG | + | tig0035626:8311-8330 | Msa1455250:intergenic | 30.0% |
| ! | TTCAACCATCTTTTCTACAA+TGG | + | tig0035626:8312-8331 | Msa1455250:intergenic | 30.0% |
| TTCCTCTACATCTAACAATT+AGG | + | tig0035626:8422-8441 | Msa1455250:intergenic | 30.0% | |
| TAATTGTTAGATGTAGAGGA+AGG | - | tig0035626:8421-8440 | Msa1455250:intron | 30.0% | |
| AGAATTAGAGGTTAATGGTT+TGG | - | tig0035626:8475-8494 | Msa1455250:intron | 30.0% | |
| CAACTCCAGTAATTTATAAG+TGG | - | tig0035626:8663-8682 | Msa1455250:CDS | 30.0% | |
| AGGAACCACTTATAAATTAC+TGG | + | tig0035626:8671-8690 | Msa1455250:intergenic | 30.0% | |
| ! | TTATAAGTGGTTCCTTTTCA+AGG | - | tig0035626:8676-8695 | Msa1455250:CDS | 30.0% |
| TAAAAAGGGTTTGTGGTATT+TGG | - | tig0035626:8991-9010 | Msa1455250:CDS | 30.0% | |
| TCTCAAGAAAATCATAGAAG+GGG | + | tig0035626:9259-9278 | Msa1455250:intergenic | 30.0% | |
| CTCTCAAGAAAATCATAGAA+GGG | + | tig0035626:9260-9279 | Msa1455250:intergenic | 30.0% | |
| ACTCTCAAGAAAATCATAGA+AGG | + | tig0035626:9261-9280 | Msa1455250:intergenic | 30.0% | |
| ! | TAGCAGAAGTGATTTTTAAC+AGG | - | tig0035626:9476-9495 | Msa1455250:CDS | 30.0% |
| !! | ATTACTACACTTTTGAAGAC+AGG | - | tig0035626:9722-9741 | Msa1455250:CDS | 30.0% |
| !!! | AATCTTTTTTCCTTAACGAG+TGG | - | tig0035626:9931-9950 | Msa1455250:intron | 30.0% |
| ATTTCCTGAGTAACATTCTT+AGG | - | tig0035626:9996-10015 | Msa1455250:intron | 30.0% | |
| TTTCCTGAGTAACATTCTTA+GGG | - | tig0035626:9997-10016 | Msa1455250:intron | 30.0% | |
| ! | CAGTTTGTTCATATTTCTTC+TGG | - | tig0035626:10192-10211 | Msa1455250:intron | 30.0% |
| !!! | GTTACTAGTTTTTCAGACAA+AGG | + | tig0035626:10740-10759 | Msa1455250:intergenic | 30.0% |
| TCCAAGTGTGTTTAGATAAA+GGG | + | tig0035626:10914-10933 | Msa1455250:intergenic | 30.0% | |
| CATGTGTTTGATATGATTAC+AGG | - | tig0035626:11083-11102 | Msa1455250:intron | 30.0% | |
| !! | AAACTTTGGGAACCTTTTTA+AGG | - | tig0035626:11281-11300 | Msa1455250:CDS | 30.0% |
| CAAGTGTATGAACCTTAAAA+AGG | + | tig0035626:11296-11315 | Msa1455250:intergenic | 30.0% | |
| ACATGTTCTAATAATTGCTC+TGG | + | tig0035626:11517-11536 | Msa1455250:intergenic | 30.0% | |
| TCATAAAACAATCCAAATCC+AGG | - | tig0035626:11563-11582 | Msa1455250:CDS | 30.0% | |
| TTAGAAAATTTCCCAAGTGT+TGG | + | tig0035626:11747-11766 | Msa1455250:intergenic | 30.0% | |
| TGTAAAATCTCGGCATAAAT+TGG | - | tig0035626:11861-11880 | Msa1455250:intron | 30.0% | |
| TATCTAATTTCAGGAATGCA+TGG | - | tig0035626:11995-12014 | Msa1455250:intron | 30.0% | |
| ATCTAATTTCAGGAATGCAT+GGG | - | tig0035626:11996-12015 | Msa1455250:intron | 30.0% | |
| ATGTCTGTGTTTGTGTAAAA+TGG | - | tig0035626:12195-12214 | Msa1455250:intron | 30.0% | |
| AATATGGTTTATCATGGTGA+GGG | + | tig0035626:12266-12285 | Msa1455250:intergenic | 30.0% | |
| AAATATGGTTTATCATGGTG+AGG | + | tig0035626:12267-12286 | Msa1455250:intergenic | 30.0% | |
| TATGCAGATAAATACTGACA+GGG | - | tig0035626:12785-12804 | Msa1455250:intron | 30.0% | |
| ! | TTTAGACCTCTAAAGATGTT+TGG | + | tig0035626:12815-12834 | Msa1455250:intergenic | 30.0% |
| ! | TGGTTTTTGATAGAACACTA+TGG | - | tig0035626:12935-12954 | Msa1455250:intron | 30.0% |
| AAAGATTTGATCCTAAGTCA+AGG | - | tig0035626:13021-13040 | Msa1455250:intron | 30.0% | |
| AAATAGAATAAGACGATCAC+AGG | + | tig0035626:13236-13255 | Msa1455250:intergenic | 30.0% | |
| ! | TCCATTACAGATTAGTTGTT+TGG | - | tig0035626:13307-13326 | Msa1455250:intron | 30.0% |
| TCCAAACAACTAATCTGTAA+TGG | + | tig0035626:13311-13330 | Msa1455250:intergenic | 30.0% | |
| CAATATGATATCCAAGAGAT+TGG | - | tig0035626:13385-13404 | Msa1455250:CDS | 30.0% | |
| ! | GTTCATTTTATTGTAGTTCC+CGG | + | tig0035626:13413-13432 | Msa1455250:intergenic | 30.0% |
| CAATAAAATGAACGCAAGAA+AGG | - | tig0035626:13420-13439 | Msa1455250:intron | 30.0% | |
| CATGAAGAAATCTGACAATT+AGG | + | tig0035626:13533-13552 | Msa1455250:intergenic | 30.0% | |
| CTAATTGTCAGATTTCTTCA+TGG | - | tig0035626:13531-13550 | Msa1455250:CDS | 30.0% | |
| AATACCCTAATCTTTCTTTG+GGG | + | tig0035626:13566-13585 | Msa1455250:intergenic | 30.0% | |
| CAATACCCTAATCTTTCTTT+GGG | + | tig0035626:13567-13586 | Msa1455250:intergenic | 30.0% | |
| ACAATACCCTAATCTTTCTT+TGG | + | tig0035626:13568-13587 | Msa1455250:intergenic | 30.0% | |
| !! | AAAGAAAGATTAGGGTATTG+TGG | - | tig0035626:13567-13586 | Msa1455250:CDS | 30.0% |
| ! | CGTTTTTCCAAAGATTATTG+GGG | + | tig0035626:13711-13730 | Msa1455250:intergenic | 30.0% |
| ! | AATTCCTCATCATTCCATTT+TGG | - | tig0035626:13776-13795 | Msa1455250:intron | 30.0% |
| AAATCCAAAATGGAATGATG+AGG | + | tig0035626:13783-13802 | Msa1455250:intergenic | 30.0% | |
| CATCTCAGAAAAGAAAACTA+AGG | - | tig0035626:13916-13935 | Msa1455250:CDS | 30.0% | |
| ATGGGACTAAAAAAACATCA+AGG | - | tig0035626:13968-13987 | Msa1455250:intron | 30.0% | |
| GAGATAGATAGGAAAGAAAA+TGG | + | tig0035626:14262-14281 | Msa1455250:intergenic | 30.0% | |
| !! | TCCCCACTCTAAAATATTAT+TGG | - | tig0035626:14355-14374 | Msa1455250:intron | 30.0% |
| CTTTCAGTTATTCACTGTTA+TGG | - | tig0035626:14384-14403 | Msa1455250:intron | 30.0% | |
| AATTTCATTGCAACATCCTT+TGG | + | tig0035626:14557-14576 | Msa1455250:intergenic | 30.0% | |
| GAATTACAAAACTATTCGGT+TGG | - | tig0035626:14733-14752 | Msa1455250:intron | 30.0% | |
| ! | GATACTGGAAGTATAATGTT+GGG | - | tig0035626:14807-14826 | Msa1455250:CDS | 30.0% |
| !! | TTGATAGTGTATCTGATCGA+AGG | - | tig0035626:6088-6107 | Msa1455250:CDS | 35.0% |
| ACTATCAACTCATCACTAGA+AGG | + | tig0035626:6282-6301 | Msa1455250:intergenic | 35.0% | |
| ! | CTTTTCAATTCCCATGAAAG+GGG | + | tig0035626:6394-6413 | Msa1455250:intergenic | 35.0% |
| ! | CCTTTTCAATTCCCATGAAA+GGG | + | tig0035626:6395-6414 | Msa1455250:intergenic | 35.0% |
| CCTTTCATGGGAATTGAAAA+GGG | - | tig0035626:6393-6412 | Msa1455250:intron | 35.0% | |
| CTTTCATGGGAATTGAAAAG+GGG | - | tig0035626:6394-6413 | Msa1455250:intron | 35.0% | |
| TTTCATGGGAATTGAAAAGG+GGG | - | tig0035626:6395-6414 | Msa1455250:intron | 35.0% | |
| ATGATCCACAATTAGATGCT+AGG | - | tig0035626:6445-6464 | Msa1455250:intron | 35.0% | |
| AAAGAAAACTTCTGTGGCTT+CGG | + | tig0035626:6731-6750 | Msa1455250:intergenic | 35.0% | |
| ! | GCTTTTCCAGTCTAAAGATA+TGG | - | tig0035626:6762-6781 | Msa1455250:intron | 35.0% |
| AGATATGGGATTAAGGAGAA+TGG | - | tig0035626:6777-6796 | Msa1455250:intron | 35.0% | |
| AATAAGCATGTCGCATACAT+GGG | + | tig0035626:7205-7224 | Msa1455250:intergenic | 35.0% | |
| AAATAAGCATGTCGCATACA+TGG | + | tig0035626:7206-7225 | Msa1455250:intergenic | 35.0% | |
| TCAGGATTTGTCTGTAAAGA+GGG | + | tig0035626:7235-7254 | Msa1455250:intergenic | 35.0% | |
| TTCAGGATTTGTCTGTAAAG+AGG | + | tig0035626:7236-7255 | Msa1455250:intergenic | 35.0% | |
| ! | CTCCACCTTTTTACAATTTC+AGG | + | tig0035626:7253-7272 | Msa1455250:intergenic | 35.0% |
| ! | TTTTGTACAGTTTCATGCAC+TGG | - | tig0035626:7309-7328 | Msa1455250:intron | 35.0% |
| TTTGTACAGTTTCATGCACT+GGG | - | tig0035626:7310-7329 | Msa1455250:intron | 35.0% | |
| TTCTTATAAATTGGGACGGA+GGG | + | tig0035626:7615-7634 | Msa1455250:intergenic | 35.0% | |
| TTTCTTATAAATTGGGACGG+AGG | + | tig0035626:7616-7635 | Msa1455250:intergenic | 35.0% | |
| !!! | AAATTGCATGGGGGTATTTT+TGG | + | tig0035626:7706-7725 | Msa1455250:intergenic | 35.0% |
| TCGGCAAATGTATAAACATG+TGG | + | tig0035626:7740-7759 | Msa1455250:intergenic | 35.0% | |
| TCTATGGAATTAAACCGTAG+AGG | - | tig0035626:7881-7900 | Msa1455250:intron | 35.0% | |
| AGATGGTTGAATCTCGATTT+AGG | - | tig0035626:8321-8340 | Msa1455250:intron | 35.0% | |
| AGCCTAATTGTTAGATGTAG+AGG | - | tig0035626:8417-8436 | Msa1455250:intron | 35.0% | |
| GGTTTGGATATAGACATACA+TGG | - | tig0035626:8491-8510 | Msa1455250:intron | 35.0% | |
| ATCATAAAACATGTCCCACT+AGG | + | tig0035626:8565-8584 | Msa1455250:intergenic | 35.0% | |
| TGATAATCAATGTAGGTCCT+AGG | + | tig0035626:8752-8771 | Msa1455250:intergenic | 35.0% | |
| ACAGCGATGATAATCAATGT+AGG | + | tig0035626:8759-8778 | Msa1455250:intergenic | 35.0% | |
| ! | AAAAAAGAAGGCCTTTGAGA+AGG | + | tig0035626:8933-8952 | Msa1455250:intergenic | 35.0% |
| GTGTATTATTTCCTGACTCA+CGG | + | tig0035626:9223-9242 | Msa1455250:intergenic | 35.0% | |
| TCAGGAAATAATACACAGTC+AGG | - | tig0035626:9227-9246 | Msa1455250:CDS | 35.0% | |
| CAGGAAATAATACACAGTCA+GGG | - | tig0035626:9228-9247 | Msa1455250:CDS | 35.0% | |
| AGGAAATAATACACAGTCAG+GGG | - | tig0035626:9229-9248 | Msa1455250:CDS | 35.0% | |
| ACAGCAGCAAATCTTAAAAC+TGG | + | tig0035626:9413-9432 | Msa1455250:intergenic | 35.0% | |
| ACAAAGCTCAAGTTTAACCA+AGG | + | tig0035626:9575-9594 | Msa1455250:intergenic | 35.0% | |
| CACTAACTGCAACATTGATA+TGG | - | tig0035626:9655-9674 | Msa1455250:CDS | 35.0% | |
| AAGTGTAGTAATAGCAAGTG+TGG | + | tig0035626:9714-9733 | Msa1455250:intergenic | 35.0% | |
| AGTAACATTCTTAGGGAAGA+AGG | - | tig0035626:10004-10023 | Msa1455250:intron | 35.0% | |
| TGTAGTATCTATGGTTCAAG+GGG | + | tig0035626:10249-10268 | Msa1455250:intergenic | 35.0% | |
| GTGTAGTATCTATGGTTCAA+GGG | + | tig0035626:10250-10269 | Msa1455250:intergenic | 35.0% | |
| AGTGTAGTATCTATGGTTCA+AGG | + | tig0035626:10251-10270 | Msa1455250:intergenic | 35.0% | |
| CTTAGCAAAACAAATATGCG+CGG | + | tig0035626:10536-10555 | Msa1455250:intergenic | 35.0% | |
| !! | TCTTTTTGACAGTGATGATG+AGG | - | tig0035626:10562-10581 | Msa1455250:CDS | 35.0% |
| AGAAAATCATCTTCTTTCGG+CGG | + | tig0035626:10808-10827 | Msa1455250:intergenic | 35.0% | |
| ACCCTTTATCTAAACACACT+TGG | - | tig0035626:10910-10929 | Msa1455250:CDS | 35.0% | |
| CTCCAAGTGTGTTTAGATAA+AGG | + | tig0035626:10915-10934 | Msa1455250:intergenic | 35.0% | |
| CTTTATCTAAACACACTTGG+AGG | - | tig0035626:10913-10932 | Msa1455250:CDS | 35.0% | |
| TGAGACTGATAAAGCTGTAA+AGG | - | tig0035626:10951-10970 | Msa1455250:CDS | 35.0% | |
| ! | AAAGTTTGCAAACTCTGGAA+TGG | + | tig0035626:11268-11287 | Msa1455250:intergenic | 35.0% |
| ATTCCAGAGTTTGCAAACTT+TGG | - | tig0035626:11267-11286 | Msa1455250:CDS | 35.0% | |
| TTCCAGAGTTTGCAAACTTT+GGG | - | tig0035626:11268-11287 | Msa1455250:CDS | 35.0% | |
| TTACAAACAAGACCTGGATT+TGG | + | tig0035626:11578-11597 | Msa1455250:intergenic | 35.0% | |
| CAATTACGATAACCTGAACA+AGG | + | tig0035626:11611-11630 | Msa1455250:intergenic | 35.0% | |
| ! | TGTTCAGGTTATCGTAATTG+TGG | - | tig0035626:11611-11630 | Msa1455250:CDS | 35.0% |
| ! | TCTGAAGTTTATTGTTCGAG+AGG | - | tig0035626:11770-11789 | Msa1455250:intron | 35.0% |
| ! | TCGGCATAAATTGGATTTTC+AGG | - | tig0035626:11870-11889 | Msa1455250:intron | 35.0% |
| AGCAGATTACACATTGAAAG+TGG | - | tig0035626:11969-11988 | Msa1455250:intron | 35.0% | |
| GCAGATTACACATTGAAAGT+GGG | - | tig0035626:11970-11989 | Msa1455250:intron | 35.0% | |
| CAGATTACACATTGAAAGTG+GGG | - | tig0035626:11971-11990 | Msa1455250:intron | 35.0% | |
| AGATTACACATTGAAAGTGG+GGG | - | tig0035626:11972-11991 | Msa1455250:intron | 35.0% | |
| GATGACAGTATTTACAGCTT+CGG | + | tig0035626:12085-12104 | Msa1455250:intergenic | 35.0% | |
| AATACTGTCATCAACCTTCT+TGG | - | tig0035626:12093-12112 | Msa1455250:intron | 35.0% | |
| ACGAAGAGTTCAAAAGAAAC+AGG | + | tig0035626:12152-12171 | Msa1455250:intergenic | 35.0% | |
| GTTTGTGTAAAATGGTTGTG+AGG | - | tig0035626:12203-12222 | Msa1455250:intron | 35.0% | |
| TTACTGTAGCATAGTTACTG+TGG | - | tig0035626:12329-12348 | Msa1455250:intron | 35.0% | |
| ATGAAAACATACACCCAAAG+TGG | - | tig0035626:12446-12465 | Msa1455250:intron | 35.0% | |
| TGAAAACATACACCCAAAGT+GGG | - | tig0035626:12447-12466 | Msa1455250:intron | 35.0% | |
| TGTTTGAGAAAACCCACTTT+GGG | + | tig0035626:12462-12481 | Msa1455250:intergenic | 35.0% | |
| ATGTTTGAGAAAACCCACTT+TGG | + | tig0035626:12463-12482 | Msa1455250:intergenic | 35.0% | |
| ! | AGAGTGTTTAGTTCAACAGA+GGG | - | tig0035626:12550-12569 | Msa1455250:intron | 35.0% |
| GATATAACCCTCTCTTTGTT+TGG | - | tig0035626:12579-12598 | Msa1455250:intron | 35.0% | |
| TGACAAACCAAACAAAGAGA+GGG | + | tig0035626:12589-12608 | Msa1455250:intergenic | 35.0% | |
| !! | TCTCTTTGTTTGGTTTGTCA+GGG | - | tig0035626:12589-12608 | Msa1455250:intron | 35.0% |
| GTATGCAGATAAATACTGAC+AGG | - | tig0035626:12784-12803 | Msa1455250:intron | 35.0% | |
| GGCCTCAAGAAAATTCAATT+TGG | + | tig0035626:13116-13135 | Msa1455250:intergenic | 35.0% | |
| !!! | GGTTTTAGACTGCAAACTTA+TGG | + | tig0035626:13149-13168 | Msa1455250:intergenic | 35.0% |
| AAGTCAGCAAGTTCAAAAGA+TGG | - | tig0035626:13265-13284 | Msa1455250:intron | 35.0% | |
| ! | TTTGAGACCCCAATAATCTT+TGG | - | tig0035626:13701-13720 | Msa1455250:intron | 35.0% |
| GAGGAATTGCTTCAACTTAA+TGG | + | tig0035626:13764-13783 | Msa1455250:intergenic | 35.0% | |
| AAACTGGTTGCAGAATGTAT+AGG | + | tig0035626:13831-13850 | Msa1455250:intergenic | 35.0% | |
| TATACATTCTGCAACCAGTT+TGG | - | tig0035626:13830-13849 | Msa1455250:CDS | 35.0% | |
| GGTAAATGAGTGCAGTATTT+AGG | - | tig0035626:13851-13870 | Msa1455250:CDS | 35.0% | |
| ! | TGAGTGCAGTATTTAGGATT+AGG | - | tig0035626:13857-13876 | Msa1455250:CDS | 35.0% |
| !! | TTTTGTCACTTGGATTGTTC+TGG | + | tig0035626:13892-13911 | Msa1455250:intergenic | 35.0% |
| ! | GAGATGTTCATTTTGTCACT+TGG | + | tig0035626:13902-13921 | Msa1455250:intergenic | 35.0% |
| ATTTGTGAAGATGCAAGAAG+AGG | - | tig0035626:14128-14147 | Msa1455250:intron | 35.0% | |
| TACAGTAGGAAATTGTGTCA+TGG | - | tig0035626:14161-14180 | Msa1455250:intron | 35.0% | |
| ATGTTGGAGAAGAGATAGAT+AGG | + | tig0035626:14273-14292 | Msa1455250:intergenic | 35.0% | |
| ATCTATCTCTTCTCCAACAT+TGG | - | tig0035626:14273-14292 | Msa1455250:intron | 35.0% | |
| CATGTGTGTGATCTTGAATT+GGG | + | tig0035626:14467-14486 | Msa1455250:intergenic | 35.0% | |
| ACATGTGTGTGATCTTGAAT+TGG | + | tig0035626:14468-14487 | Msa1455250:intergenic | 35.0% | |
| !! | ATCACACACATGTTTGTTGT+CGG | - | tig0035626:14475-14494 | Msa1455250:intron | 35.0% |
| !! | GAAATATAAAGGTGCTTGTG+CGG | - | tig0035626:14510-14529 | Msa1455250:intron | 35.0% |
| ! | CGATACTGGAAGTATAATGT+TGG | - | tig0035626:14806-14825 | Msa1455250:CDS | 35.0% |
| AATGTTGGGCCTATAACTAT+TGG | - | tig0035626:14821-14840 | Msa1455250:CDS | 35.0% | |
| AAAAATGCCGACACAAACAT+TGG | + | tig0035626:14920-14939 | Msa1455250:intergenic | 35.0% | |
| AATGAATGCACAACTCACTC+GGG | + | tig0035626:5766-5785 | Msa1455250:intergenic | 40.0% | |
| GAATGAATGCACAACTCACT+CGG | + | tig0035626:5767-5786 | Msa1455250:intergenic | 40.0% | |
| TCATCATCTTTCTTCACGAG+TGG | + | tig0035626:5834-5853 | Msa1455250:intergenic | 40.0% | |
| TTGGAAACGAAACATGGATC+TGG | + | tig0035626:5943-5962 | Msa1455250:intergenic | 40.0% | |
| CGAGAATTGGAAACGAAACA+TGG | + | tig0035626:5949-5968 | Msa1455250:intergenic | 40.0% | |
| AGTCAGTATTCGTGCTTCAT+AGG | - | tig0035626:6121-6140 | Msa1455250:CDS | 40.0% | |
| CCCTTTCATGGGAATTGAAA+AGG | - | tig0035626:6392-6411 | Msa1455250:intron | 40.0% | |
| ! | CCCTTTTCAATTCCCATGAA+AGG | + | tig0035626:6396-6415 | Msa1455250:intergenic | 40.0% |
| CATCTCCTAGCATCTAATTG+TGG | + | tig0035626:6453-6472 | Msa1455250:intergenic | 40.0% | |
| CTGCTATACCTACTGAATCA+GGG | - | tig0035626:6604-6623 | Msa1455250:intron | 40.0% | |
| ! | TCAGGGAGAGACTTTTACAA+AGG | - | tig0035626:6621-6640 | Msa1455250:intron | 40.0% |
| GACAGCAAAGAAAACTTCTG+TGG | + | tig0035626:6737-6756 | Msa1455250:intergenic | 40.0% | |
| TGTCACAAGCTCTCTTATGA+AGG | - | tig0035626:6962-6981 | Msa1455250:intron | 40.0% | |
| ! | TAGATGAATGCCACTGACTA+AGG | + | tig0035626:7129-7148 | Msa1455250:intergenic | 40.0% |
| ATAAGCATGTCGCATACATG+GGG | + | tig0035626:7204-7223 | Msa1455250:intergenic | 40.0% | |
| TGTAAAAAGGTGGAGCAATG+AGG | - | tig0035626:7258-7277 | Msa1455250:intron | 40.0% | |
| GTGAATTATAGTTCGCTTGC+TGG | - | tig0035626:7393-7412 | Msa1455250:intron | 40.0% | |
| TTGCTTATAAATTGGGACGG+AGG | - | tig0035626:8044-8063 | Msa1455250:intron | 40.0% | |
| TGCTTATAAATTGGGACGGA+GGG | - | tig0035626:8045-8064 | Msa1455250:intron | 40.0% | |
| TTACTATCTCTCCATCCACT+CGG | - | tig0035626:8106-8125 | Msa1455250:intron | 40.0% | |
| ! | CATTGATTGTGGGGTATTTC+TGG | + | tig0035626:8132-8151 | Msa1455250:intergenic | 40.0% |
| CAGAAATACCCCACAATCAA+TGG | - | tig0035626:8130-8149 | Msa1455250:intron | 40.0% | |
| GTTTGCAAGTCTAAGAAGTC+AGG | + | tig0035626:8169-8188 | Msa1455250:intergenic | 40.0% | |
| AGCACCCATTGTAGAAAAGA+TGG | - | tig0035626:8304-8323 | Msa1455250:intron | 40.0% | |
| TGGTTGAATCTCGATTTAGG+TGG | - | tig0035626:8324-8343 | Msa1455250:intron | 40.0% | |
| GATCGGCTACATAGATCAAA+CGG | + | tig0035626:8539-8558 | Msa1455250:intergenic | 40.0% | |
| ATCAACTCTCTGCCTTGAAA+AGG | + | tig0035626:8691-8710 | Msa1455250:intergenic | 40.0% | |
| ! | GCGAAGTTTTTATCTCACCT+AGG | - | tig0035626:8732-8751 | Msa1455250:CDS | 40.0% |
| TGCAGATACGACAGAATGAT+CGG | - | tig0035626:9026-9045 | Msa1455250:CDS | 40.0% | |
| GACTTGTGTAACGAATCAAC+AGG | + | tig0035626:9117-9136 | Msa1455250:intergenic | 40.0% | |
| !! | GTTGATTCGTTACACAAGTC+AGG | - | tig0035626:9117-9136 | Msa1455250:intron | 40.0% |
| TCCTTTCACGTGAATCTTGT+TGG | - | tig0035626:9147-9166 | Msa1455250:CDS | 40.0% | |
| TCCAACAAGATTCACGTGAA+AGG | + | tig0035626:9151-9170 | Msa1455250:intergenic | 40.0% | |
| CAAGAAAATCATAGAAGGGG+CGG | + | tig0035626:9256-9275 | Msa1455250:intergenic | 40.0% | |
| AGAGCTATTACAGAGCTCAA+TGG | - | tig0035626:9323-9342 | Msa1455250:intron | 40.0% | |
| AGCTGAAGAACAGTAATTGC+TGG | + | tig0035626:9371-9390 | Msa1455250:intergenic | 40.0% | |
| ACAAAGGCTTACCTTGTTCA+AGG | + | tig0035626:9441-9460 | Msa1455250:intergenic | 40.0% | |
| TGCAGTTAGTGACTGATGTT+GGG | + | tig0035626:9646-9665 | Msa1455250:intergenic | 40.0% | |
| TTGCAGTTAGTGACTGATGT+TGG | + | tig0035626:9647-9666 | Msa1455250:intergenic | 40.0% | |
| GACAGGAAATGAATCAAGTG+TGG | - | tig0035626:9739-9758 | Msa1455250:CDS | 40.0% | |
| TCTGTATGTGTGCTGTACTA+CGG | - | tig0035626:9877-9896 | Msa1455250:intron | 40.0% | |
| CTTCCCTAAGAATGTTACTC+AGG | + | tig0035626:10003-10022 | Msa1455250:intergenic | 40.0% | |
| AACATTCTTAGGGAAGAAGG+TGG | - | tig0035626:10007-10026 | Msa1455250:intron | 40.0% | |
| !!! | AGGTGGTTTTGAGTACAAGA+AGG | - | tig0035626:10024-10043 | Msa1455250:intron | 40.0% |
| TAGAGAAATCCCTGATGCAA+AGG | - | tig0035626:10075-10094 | Msa1455250:intron | 40.0% | |
| ! | CTACGCAGGTATTTCTTTTG+CGG | - | tig0035626:10155-10174 | Msa1455250:intron | 40.0% |
| ACCATAGATACTACACTTCC+TGG | - | tig0035626:10254-10273 | Msa1455250:CDS | 40.0% | |
| CCATAGATACTACACTTCCT+GGG | - | tig0035626:10255-10274 | Msa1455250:CDS | 40.0% | |
| TACACTTCCTGGGAATTGAA+GGG | - | tig0035626:10265-10284 | Msa1455250:CDS | 40.0% | |
| ! | TTGCTAGGGTCTGATGTTTT+TGG | + | tig0035626:10291-10310 | Msa1455250:intergenic | 40.0% |
| !! | TGCTGCAGTTGATGAGTTAA+AGG | - | tig0035626:10395-10414 | Msa1455250:intron | 40.0% |
| !!! | CGCGCATATTTGTTTTGCTA+AGG | - | tig0035626:10534-10553 | Msa1455250:CDS | 40.0% |
| CTGTAAAGGACTTCCTGTTT+GGG | - | tig0035626:10965-10984 | Msa1455250:CDS | 40.0% | |
| TTGACAAGCGGGATATCAAA+TGG | + | tig0035626:10991-11010 | Msa1455250:intergenic | 40.0% | |
| ATGTCAAAAGCCTCTTCTGA+AGG | + | tig0035626:11111-11130 | Msa1455250:intergenic | 40.0% | |
| TTTCTTCTCTGCAAGTGGTT+GGG | + | tig0035626:11160-11179 | Msa1455250:intergenic | 40.0% | |
| TGGTAAAAAGCCAACTGGTT+TGG | - | tig0035626:11185-11204 | Msa1455250:intron | 40.0% | |
| ! | GGTAAAAAGCCAACTGGTTT+GGG | - | tig0035626:11186-11205 | Msa1455250:intron | 40.0% |
| ATATGCATCAGCTGTTGATG+GGG | + | tig0035626:11229-11248 | Msa1455250:intergenic | 40.0% | |
| GATATGCATCAGCTGTTGAT+GGG | + | tig0035626:11230-11249 | Msa1455250:intergenic | 40.0% | |
| TGATATGCATCAGCTGTTGA+TGG | + | tig0035626:11231-11250 | Msa1455250:intergenic | 40.0% | |
| TTCCCAAAGTTTGCAAACTC+TGG | + | tig0035626:11273-11292 | Msa1455250:intergenic | 40.0% | |
| ! | AGAAGCAGATGAGTTTTCAG+AGG | - | tig0035626:11641-11660 | Msa1455250:intron | 40.0% |
| TCATATGGAAGAGACTTGAG+AGG | + | tig0035626:11678-11697 | Msa1455250:intergenic | 40.0% | |
| TCTCTTCCATATGATTCACC+TGG | - | tig0035626:11684-11703 | Msa1455250:intron | 40.0% | |
| ATCTGTCCAGGTGAATCATA+TGG | + | tig0035626:11693-11712 | Msa1455250:intergenic | 40.0% | |
| ! | TTCACCTGGACAGATTTTTG+TGG | - | tig0035626:11698-11717 | Msa1455250:intron | 40.0% |
| AATGCCACAAAAATCTGTCC+AGG | + | tig0035626:11705-11724 | Msa1455250:intergenic | 40.0% | |
| TACTCGTCCCCTCTATTTAT+GGG | - | tig0035626:11793-11812 | Msa1455250:intron | 40.0% | |
| TGAAGATGAATACCAGCTAG+AGG | - | tig0035626:11930-11949 | Msa1455250:intron | 40.0% | |
| !! | AAGTGGGGGTATCTAATTTC+AGG | - | tig0035626:11986-12005 | Msa1455250:intron | 40.0% |
| AAAGAAACAGGTAACACCAC+TGG | + | tig0035626:12140-12159 | Msa1455250:intergenic | 40.0% | |
| ! | GGCATTGGGTAATTAACAAG+AGG | + | tig0035626:12245-12264 | Msa1455250:intergenic | 40.0% |
| !! | TTTATCATGGTGAGGGCATT+GGG | + | tig0035626:12259-12278 | Msa1455250:intergenic | 40.0% |
| TGTAGCATAGTTACTGTGGT+GGG | - | tig0035626:12333-12352 | Msa1455250:intron | 40.0% | |
| ! | CAGAGTGTTTAGTTCAACAG+AGG | - | tig0035626:12549-12568 | Msa1455250:intron | 40.0% |
| ! | GAGTGTTTAGTTCAACAGAG+GGG | - | tig0035626:12551-12570 | Msa1455250:intron | 40.0% |
| ! | TTTAGTTCAACAGAGGGGAA+GGG | - | tig0035626:12556-12575 | Msa1455250:intron | 40.0% |
| CTGACAAACCAAACAAAGAG+AGG | + | tig0035626:12590-12609 | Msa1455250:intergenic | 40.0% | |
| !! | CTCTCTTTGTTTGGTTTGTC+AGG | - | tig0035626:12588-12607 | Msa1455250:intron | 40.0% |
| !! | CTCTTTGTTTGGTTTGTCAG+GGG | - | tig0035626:12590-12609 | Msa1455250:intron | 40.0% |
| GGTATTACACTGGTAGAACA+GGG | + | tig0035626:12660-12679 | Msa1455250:intergenic | 40.0% | |
| TGGTATTACACTGGTAGAAC+AGG | + | tig0035626:12661-12680 | Msa1455250:intergenic | 40.0% | |
| TGATCAATAACAGCTGTCAG+AGG | + | tig0035626:12688-12707 | Msa1455250:intergenic | 40.0% | |
| ! | TAATGTTTTGTACTCAGGGC+CGG | + | tig0035626:13190-13209 | Msa1455250:intergenic | 40.0% |
| TAAGACGATCACAGGTATGT+AGG | + | tig0035626:13228-13247 | Msa1455250:intergenic | 40.0% | |
| AGCAAGTTCAAAAGATGGTG+AGG | - | tig0035626:13270-13289 | Msa1455250:intron | 40.0% | |
| GCAAGTTCAAAAGATGGTGA+GGG | - | tig0035626:13271-13290 | Msa1455250:intron | 40.0% | |
| TAGTTGTTTGGATGTGTTGC+TGG | - | tig0035626:13319-13338 | Msa1455250:intron | 40.0% | |
| GACTGATGTATTTGTCAAGC+AGG | + | tig0035626:13348-13367 | Msa1455250:intergenic | 40.0% | |
| GATATCCAAGAGATTGGATC+CGG | - | tig0035626:13391-13410 | Msa1455250:CDS | 40.0% | |
| ATATCCAAGAGATTGGATCC+GGG | - | tig0035626:13392-13411 | Msa1455250:CDS | 40.0% | |
| AATGAACGCAAGAAAGGAAC+AGG | - | tig0035626:13426-13445 | Msa1455250:intron | 40.0% | |
| ATTTACTAGTGCCTGCATGT+TGG | - | tig0035626:13460-13479 | Msa1455250:intron | 40.0% | |
| TTTACTAGTGCCTGCATGTT+GGG | - | tig0035626:13461-13480 | Msa1455250:intron | 40.0% | |
| AATGGTTATACCCAACATGC+AGG | + | tig0035626:13474-13493 | Msa1455250:intergenic | 40.0% | |
| AGATTTCTTCATGGTCCAAC+AGG | - | tig0035626:13540-13559 | Msa1455250:CDS | 40.0% | |
| !! | TTAGGGTATTGTGGCTTACT+CGG | - | tig0035626:13576-13595 | Msa1455250:CDS | 40.0% |
| ACTGCACTCATTTACCAAAC+TGG | + | tig0035626:13847-13866 | Msa1455250:intergenic | 40.0% | |
| !!! | TTTTAGAGTGGGGAGAGAAA+TGG | + | tig0035626:14349-14368 | Msa1455250:intergenic | 40.0% |
| !! | TTTTTATTTGTGGGCTGTGC+AGG | - | tig0035626:14424-14443 | Msa1455250:intron | 40.0% |
| !! | TTTTATTTGTGGGCTGTGCA+GGG | - | tig0035626:14425-14444 | Msa1455250:intron | 40.0% |
| !! | TCACACACATGTTTGTTGTC+GGG | - | tig0035626:14476-14495 | Msa1455250:intron | 40.0% |
| TTGTTGTCGGGTGTATTCAT+AGG | - | tig0035626:14488-14507 | Msa1455250:intron | 40.0% | |
| ATCACTGACAGTTTCATCCT+CGG | + | tig0035626:14591-14610 | Msa1455250:intergenic | 40.0% | |
| TGATGCCATTCATGAGATTG+TGG | - | tig0035626:14607-14626 | Msa1455250:intron | 40.0% | |
| ATTCATGAGATTGTGGCTAG+CGG | - | tig0035626:14614-14633 | Msa1455250:intron | 40.0% | |
| TTTGTCCCTTACTGCATTCT+TGG | - | tig0035626:14772-14791 | Msa1455250:intron | 40.0% | |
| GTCTACCAAGAATGCAGTAA+GGG | + | tig0035626:14780-14799 | Msa1455250:intergenic | 40.0% | |
| AGTCTACCAAGAATGCAGTA+AGG | + | tig0035626:14781-14800 | Msa1455250:intergenic | 40.0% | |
| TCCTTGACCAATGTTTGTGT+CGG | - | tig0035626:14910-14929 | Msa1455250:five_prime_UTR | 40.0% | |
| ATCACGGTAGCTGAATCTCA+GGG | + | tig0035626:5804-5823 | Msa1455250:intergenic | 45.0% | |
| GAGAAAAACCTTCATCGTCG+CGG | + | tig0035626:5857-5876 | Msa1455250:intergenic | 45.0% | |
| AGCTGAGTATTCCCCTTTCA+TGG | - | tig0035626:6380-6399 | Msa1455250:intron | 45.0% | |
| GCTGAGTATTCCCCTTTCAT+GGG | - | tig0035626:6381-6400 | Msa1455250:intron | 45.0% | |
| GCTGCTATACCTACTGAATC+AGG | - | tig0035626:6603-6622 | Msa1455250:intron | 45.0% | |
| AAGTCTCTCCCTGATTCAGT+AGG | + | tig0035626:6615-6634 | Msa1455250:intergenic | 45.0% | |
| AATACCGCTCAATTTGTGCC+AGG | + | tig0035626:7061-7080 | Msa1455250:intergenic | 45.0% | |
| CAGTGGCATTCATCTACTAC+AGG | - | tig0035626:7133-7152 | Msa1455250:intron | 45.0% | |
| AACCAATCTTGCAGCATACC+TGG | + | tig0035626:7345-7364 | Msa1455250:intergenic | 45.0% | |
| ! | GGTATGCTGCAAGATTGGTT+TGG | - | tig0035626:7345-7364 | Msa1455250:intron | 45.0% |
| !! | GTTCGCTTGCTGGCTTATAT+CGG | - | tig0035626:7403-7422 | Msa1455250:intron | 45.0% |
| ATGTTCAGCACGAGCTAATC+AGG | - | tig0035626:7470-7489 | Msa1455250:intron | 45.0% | |
| ! | ACGGAGGGAGTACAATACAT+AGG | + | tig0035626:7600-7619 | Msa1455250:intergenic | 45.0% |
| ! | TACCCCACAATCAATGGACT+AGG | - | tig0035626:8136-8155 | Msa1455250:intron | 45.0% |
| !! | ACCCCACAATCAATGGACTA+GGG | - | tig0035626:8137-8156 | Msa1455250:intron | 45.0% |
| ! | ACCCCTAGTCCATTGATTGT+GGG | + | tig0035626:8142-8161 | Msa1455250:intergenic | 45.0% |
| TCGATCTACTCTCCTTCCTA+TGG | + | tig0035626:8388-8407 | Msa1455250:intergenic | 45.0% | |
| AGGAAGGAGAGTAGATCGAA+TGG | - | tig0035626:8389-8408 | Msa1455250:intron | 45.0% | |
| AAGGAGAGTAGATCGAATGG+AGG | - | tig0035626:8392-8411 | Msa1455250:intron | 45.0% | |
| AGGAGAGTAGATCGAATGGA+GGG | - | tig0035626:8393-8412 | Msa1455250:intron | 45.0% | |
| TAAAACATGTCCCACTAGGC+AGG | + | tig0035626:8561-8580 | Msa1455250:intergenic | 45.0% | |
| !! | AGCTTGTTAGCAGCTTGACA+AGG | - | tig0035626:9062-9081 | Msa1455250:intron | 45.0% |
| ! | GCTTGTTAGCAGCTTGACAA+GGG | - | tig0035626:9063-9082 | Msa1455250:intron | 45.0% |
| CTTGTTAGCAGCTTGACAAG+GGG | - | tig0035626:9064-9083 | Msa1455250:intron | 45.0% | |
| TTGTTAGCAGCTTGACAAGG+GGG | - | tig0035626:9065-9084 | Msa1455250:intron | 45.0% | |
| GTAACGAATCAACAGGCACT+GGG | + | tig0035626:9110-9129 | Msa1455250:intergenic | 45.0% | |
| TGTAACGAATCAACAGGCAC+TGG | + | tig0035626:9111-9130 | Msa1455250:intergenic | 45.0% | |
| TTGTAGGTTATCCGTGAGTC+AGG | - | tig0035626:9209-9228 | Msa1455250:CDS | 45.0% | |
| ! | CCATTTCTGACTTGTGACGT+AGG | + | tig0035626:9286-9305 | Msa1455250:intergenic | 45.0% |
| CCTACGTCACAAGTCAGAAA+TGG | - | tig0035626:9283-9302 | Msa1455250:intron | 45.0% | |
| !! | GTGCGGCTTTAAAACTTTGC+AGG | - | tig0035626:9607-9626 | Msa1455250:intron | 45.0% |
| !! | CGGCTTTAAAACTTTGCAGG+TGG | - | tig0035626:9610-9629 | Msa1455250:intron | 45.0% |
| ATCCCTGATGCAAAGGAAAC+AGG | - | tig0035626:10082-10101 | Msa1455250:intron | 45.0% | |
| TCCCTGATGCAAAGGAAACA+GGG | - | tig0035626:10083-10102 | Msa1455250:intron | 45.0% | |
| ACCCTGTTTCCTTTGCATCA+GGG | + | tig0035626:10087-10106 | Msa1455250:intergenic | 45.0% | |
| AACCCTGTTTCCTTTGCATC+AGG | + | tig0035626:10088-10107 | Msa1455250:intergenic | 45.0% | |
| GTTCACTTATCTGTCTACGC+AGG | - | tig0035626:10141-10160 | Msa1455250:intron | 45.0% | |
| ATGGTTCAAGGGGAACAACT+TGG | + | tig0035626:10239-10258 | Msa1455250:intergenic | 45.0% | |
| ! | CCCAGGAAGTGTAGTATCTA+TGG | + | tig0035626:10258-10277 | Msa1455250:intergenic | 45.0% |
| CTACACTTCCTGGGAATTGA+AGG | - | tig0035626:10264-10283 | Msa1455250:CDS | 45.0% | |
| !! | TTTTTGGCCCTTCAATTCCC+AGG | + | tig0035626:10275-10294 | Msa1455250:intergenic | 45.0% |
| AATCATCTTCTTTCGGCGGA+GGG | + | tig0035626:10804-10823 | Msa1455250:intergenic | 45.0% | |
| AAATCATCTTCTTTCGGCGG+AGG | + | tig0035626:10805-10824 | Msa1455250:intergenic | 45.0% | |
| CTAAACACACTTGGAGGTGA+TGG | - | tig0035626:10919-10938 | Msa1455250:CDS | 45.0% | |
| GCTGTAAAGGACTTCCTGTT+TGG | - | tig0035626:10964-10983 | Msa1455250:CDS | 45.0% | |
| GGATATCAAATGGCCCAAAC+AGG | + | tig0035626:10981-11000 | Msa1455250:intergenic | 45.0% | |
| TGATATCCCGCTTGTCAATC+TGG | - | tig0035626:10993-11012 | Msa1455250:CDS | 45.0% | |
| TAGTCTCCAGATTGACAAGC+GGG | + | tig0035626:11002-11021 | Msa1455250:intergenic | 45.0% | |
| CTAGTCTCCAGATTGACAAG+CGG | + | tig0035626:11003-11022 | Msa1455250:intergenic | 45.0% | |
| ATTACAGGAGCCTTCAGAAG+AGG | - | tig0035626:11098-11117 | Msa1455250:intron | 45.0% | |
| !! | TGACATTGATTCTGTGCCCA+AGG | - | tig0035626:11125-11144 | Msa1455250:intron | 45.0% |
| ! | GGTTGGGATTTGACTTCCTT+GGG | + | tig0035626:11144-11163 | Msa1455250:intergenic | 45.0% |
| ! | TGGTTGGGATTTGACTTCCT+TGG | + | tig0035626:11145-11164 | Msa1455250:intergenic | 45.0% |
| CTTTCTTCTCTGCAAGTGGT+TGG | + | tig0035626:11161-11180 | Msa1455250:intergenic | 45.0% | |
| !!! | ACCAGTTGGCTTTTTACCAG+AGG | + | tig0035626:11184-11203 | Msa1455250:intergenic | 45.0% |
| ! | TATGCATCAGCTGTTGATGG+GGG | + | tig0035626:11228-11247 | Msa1455250:intergenic | 45.0% |
| !! | GTTTGCAAACTCTGGAATGG+AGG | + | tig0035626:11265-11284 | Msa1455250:intergenic | 45.0% |
| TCGTGTTTGTGCAGTTGTAC+TGG | + | tig0035626:11492-11511 | Msa1455250:intergenic | 45.0% | |
| GTACTCGTCCCCTCTATTTA+TGG | - | tig0035626:11792-11811 | Msa1455250:intron | 45.0% | |
| TGAATACCAGCTAGAGGATC+TGG | - | tig0035626:11936-11955 | Msa1455250:intron | 45.0% | |
| ! | AGGAATGCATGGGAAAGCAT+GGG | - | tig0035626:12006-12025 | Msa1455250:intron | 45.0% |
| ! | GTTTATCATGGTGAGGGCAT+TGG | + | tig0035626:12260-12279 | Msa1455250:intergenic | 45.0% |
| CTGTAGCATAGTTACTGTGG+TGG | - | tig0035626:12332-12351 | Msa1455250:intron | 45.0% | |
| ACGAGTCTGTGATACTAACG+TGG | + | tig0035626:12408-12427 | Msa1455250:intergenic | 45.0% | |
| ! | CACAGACTCGTTTTCGATGA+AGG | - | tig0035626:12417-12436 | Msa1455250:intron | 45.0% |
| ! | GTTTAGTTCAACAGAGGGGA+AGG | - | tig0035626:12555-12574 | Msa1455250:intron | 45.0% |
| TTAGTTCAACAGAGGGGAAG+GGG | - | tig0035626:12557-12576 | Msa1455250:intron | 45.0% | |
| AGAGGCTCTTGGTATTACAC+TGG | + | tig0035626:12670-12689 | Msa1455250:intergenic | 45.0% | |
| CAGATAAATACTGACAGGGC+CGG | - | tig0035626:12789-12808 | Msa1455250:intron | 45.0% | |
| ! | GACCTCTAAAGATGTTTGGC+CGG | + | tig0035626:12811-12830 | Msa1455250:intergenic | 45.0% |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | tig0035626:12984-13003 | Msa1455250:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | tig0035626:12985-13004 | Msa1455250:intergenic | 45.0% |
| ! | AAGGCTTGGTTGTTGGTTGT+TGG | - | tig0035626:12997-13016 | Msa1455250:intron | 45.0% |
| TTCTCCAGCTCAGTTGGTTA+GGG | + | tig0035626:13062-13081 | Msa1455250:intergenic | 45.0% | |
| TTTCTCCAGCTCAGTTGGTT+AGG | + | tig0035626:13063-13082 | Msa1455250:intergenic | 45.0% | |
| ACATGTTTCTCCAGCTCAGT+TGG | + | tig0035626:13068-13087 | Msa1455250:intergenic | 45.0% | |
| !! | AATCTTTCTTTGGGGCCTGT+TGG | + | tig0035626:13558-13577 | Msa1455250:intergenic | 45.0% |
| ACAGGCCCCAAAGAAAGATT+AGG | - | tig0035626:13558-13577 | Msa1455250:CDS | 45.0% | |
| CAGGCCCCAAAGAAAGATTA+GGG | - | tig0035626:13559-13578 | Msa1455250:CDS | 45.0% | |
| !! | TAGGGTATTGTGGCTTACTC+GGG | - | tig0035626:13577-13596 | Msa1455250:CDS | 45.0% |
| CTTACTCGGGCAATTTCGTA+TGG | - | tig0035626:13590-13609 | Msa1455250:CDS | 45.0% | |
| TTGCAGAATGTATAGGCTGG+GGG | + | tig0035626:13824-13843 | Msa1455250:intergenic | 45.0% | |
| GTTGCAGAATGTATAGGCTG+GGG | + | tig0035626:13825-13844 | Msa1455250:intergenic | 45.0% | |
| GGTTGCAGAATGTATAGGCT+GGG | + | tig0035626:13826-13845 | Msa1455250:intergenic | 45.0% | |
| TGGTTGCAGAATGTATAGGC+TGG | + | tig0035626:13827-13846 | Msa1455250:intergenic | 45.0% | |
| ! | GTGTCATGGAGCACAAGTTT+TGG | - | tig0035626:14175-14194 | Msa1455250:intron | 45.0% |
| TCTCTTCTCCAACATTGGAG+AGG | - | tig0035626:14278-14297 | Msa1455250:intron | 45.0% | |
| TGAATTGGGTGGAACAACCT+CGG | + | tig0035626:14453-14472 | Msa1455250:intergenic | 45.0% | |
| GTGTGTGATCTTGAATTGGG+TGG | + | tig0035626:14464-14483 | Msa1455250:intergenic | 45.0% | |
| ! | CGGTTGTCTTTTGGACTTGA+CGG | - | tig0035626:14530-14549 | Msa1455250:intron | 45.0% |
| ! | TTTTGGACTTGACGGTCCAA+AGG | - | tig0035626:14538-14557 | Msa1455250:intron | 45.0% |
| GAAATTGACTGTCAGATCCG+AGG | - | tig0035626:14571-14590 | Msa1455250:intron | 45.0% | |
| GCTAGCCACAATCTCATGAA+TGG | + | tig0035626:14615-14634 | Msa1455250:intergenic | 45.0% | |
| ! | TGGCTAGCGGATAATCTATC+AGG | - | tig0035626:14627-14646 | Msa1455250:intron | 45.0% |
| TGGTAGACTAGCAACGATAC+TGG | - | tig0035626:14792-14811 | Msa1455250:intron | 45.0% | |
| !! | AAAAAAAAAAAAAAAAAAGA+AGG | + | tig0035626:8945-8964 | Msa1455250:intergenic | 5.0% |
| !! | AATATTAAGAAAATATTAAT+AGG | - | tig0035626:12495-12514 | Msa1455250:intron | 5.0% |
| !!! | TGTTTATTTTTTATTTTAAA+AGG | + | tig0035626:12856-12875 | Msa1455250:intergenic | 5.0% |
| CATCACGGTAGCTGAATCTC+AGG | + | tig0035626:5805-5824 | Msa1455250:intergenic | 50.0% | |
| CTGAGATTCAGCTACCGTGA+TGG | - | tig0035626:5803-5822 | Msa1455250:three_prime_UTR | 50.0% | |
| ! | ATCTGATCGAAGGCGTGTGT+CGG | - | tig0035626:6098-6117 | Msa1455250:CDS | 50.0% |
| CATAGGCTCTGTCACGATTG+CGG | - | tig0035626:6138-6157 | Msa1455250:CDS | 50.0% | |
| TGAAAAGGGGGCAGTTCTTC+AGG | - | tig0035626:6407-6426 | Msa1455250:intron | 50.0% | |
| GGCAGTTCTTCAGGAAGCAA+GGG | - | tig0035626:6416-6435 | Msa1455250:intron | 50.0% | |
| AGATGCTAGGAGATGCTCAC+AGG | - | tig0035626:6458-6477 | Msa1455250:intron | 50.0% | |
| GATACGACACAGCACTCGAA+TGG | + | tig0035626:7024-7043 | Msa1455250:intergenic | 50.0% | |
| GTGCTGTGTCGTATCACAGA+CGG | - | tig0035626:7029-7048 | Msa1455250:intron | 50.0% | |
| AAGGCAGCACTCGCAACAAT+TGG | + | tig0035626:7110-7129 | Msa1455250:intergenic | 50.0% | |
| AAGGTGGAGCAATGAGGTTC+AGG | - | tig0035626:7264-7283 | Msa1455250:intron | 50.0% | |
| CACCAGGTATGCTGCAAGAT+TGG | - | tig0035626:7340-7359 | Msa1455250:intron | 50.0% | |
| AAATTGGGACGGAGGGAGTA+TGG | - | tig0035626:8052-8071 | Msa1455250:intron | 50.0% | |
| ! | CCCCTAGTCCATTGATTGTG+GGG | + | tig0035626:8141-8160 | Msa1455250:intergenic | 50.0% |
| !! | CCCCACAATCAATGGACTAG+GGG | - | tig0035626:8138-8157 | Msa1455250:intron | 50.0% |
| ! | CACCCCTAGTCCATTGATTG+TGG | + | tig0035626:8143-8162 | Msa1455250:intergenic | 50.0% |
| TTAGGTGGTTTGAGCATGCG+TGG | - | tig0035626:8339-8358 | Msa1455250:intron | 50.0% | |
| CTATGGAATCGACACTCGAC+AGG | + | tig0035626:8371-8390 | Msa1455250:intergenic | 50.0% | |
| !! | CTGTCGAGTGTCGATTCCAT+AGG | - | tig0035626:8369-8388 | Msa1455250:intron | 50.0% |
| !! | CGAGTGTCGATTCCATAGGA+AGG | - | tig0035626:8373-8392 | Msa1455250:intron | 50.0% |
| ! | CAACCAAGCCTTATCCCACT+AGG | + | tig0035626:8628-8647 | Msa1455250:intergenic | 50.0% |
| TGGTCTGAGCTGAACCATGA+TGG | - | tig0035626:8835-8854 | Msa1455250:intron | 50.0% | |
| TGTTAGCAGCTTGACAAGGG+GGG | - | tig0035626:9066-9085 | Msa1455250:intron | 50.0% | |
| !! | ATCAACAGGCACTGGGCTAA+AGG | + | tig0035626:9103-9122 | Msa1455250:intergenic | 50.0% |
| TGCTGTTCGCACCTTGAACA+AGG | - | tig0035626:9427-9446 | Msa1455250:CDS | 50.0% | |
| CAATGGGGAAGTTGCTTGAG+AGG | + | tig0035626:9502-9521 | Msa1455250:intergenic | 50.0% | |
| GTGTGGCAATGCTTCTGTTC+TGG | + | tig0035626:9697-9716 | Msa1455250:intergenic | 50.0% | |
| GTGAGCACACTGGCAAAGTT+TGG | - | tig0035626:10372-10391 | Msa1455250:CDS | 50.0% | |
| GAGGCTTTCTTCTCTGCAAG+TGG | + | tig0035626:11165-11184 | Msa1455250:intergenic | 50.0% | |
| CTTGCAGAGAAGAAAGCCTC+TGG | - | tig0035626:11165-11184 | Msa1455250:intron | 50.0% | |
| GCCTCTGGTAAAAAGCCAAC+TGG | - | tig0035626:11180-11199 | Msa1455250:intron | 50.0% | |
| TGGAAGAGACTTGAGAGGCT+TGG | + | tig0035626:11673-11692 | Msa1455250:intergenic | 50.0% | |
| TGTGGCATTTGAGAAGCCTG+AGG | - | tig0035626:11716-11735 | Msa1455250:intron | 50.0% | |
| GTGGCATTTGAGAAGCCTGA+GGG | - | tig0035626:11717-11736 | Msa1455250:intron | 50.0% | |
| ATCATCTTCAGCCTCACCAG+TGG | + | tig0035626:11905-11924 | Msa1455250:intergenic | 50.0% | |
| ACTGGTGAGGCTGAAGATGA+TGG | - | tig0035626:11904-11923 | Msa1455250:intron | 50.0% | |
| CAGGAATGCATGGGAAAGCA+TGG | - | tig0035626:12005-12024 | Msa1455250:intron | 50.0% | |
| CATCCACTCGCTCACAATCA+GGG | + | tig0035626:12032-12051 | Msa1455250:intergenic | 50.0% | |
| TCATCCACTCGCTCACAATC+AGG | + | tig0035626:12033-12052 | Msa1455250:intergenic | 50.0% | |
| TGTGAGCGAGTGGATGAGTA+TGG | - | tig0035626:12036-12055 | Msa1455250:intron | 50.0% | |
| CGAGTGGATGAGTATGGTCT+TGG | - | tig0035626:12042-12061 | Msa1455250:intron | 50.0% | |
| ! | ATGAGTATGGTCTTGGCCCA+AGG | - | tig0035626:12049-12068 | Msa1455250:intron | 50.0% |
| ! | TGAGTATGGTCTTGGCCCAA+GGG | - | tig0035626:12050-12069 | Msa1455250:intron | 50.0% |
| ! | TGTGGTGGGACAATTCTGCT+TGG | - | tig0035626:12347-12366 | Msa1455250:intron | 50.0% |
| TAACAGCTGTCAGAGGCTCT+TGG | + | tig0035626:12681-12700 | Msa1455250:intergenic | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | + | tig0035626:12980-12999 | Msa1455250:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | tig0035626:12986-13005 | Msa1455250:intergenic | 50.0% |
| CCACTTAGTGGGATAAGGCT+TGG | - | tig0035626:12983-13002 | Msa1455250:intron | 50.0% | |
| ! | GTGGGATAAGGCTTGGTTGT+TGG | - | tig0035626:8629-8648 | Msa1455250:CDS | 50.0% |
| ATCCTAAGTCAAGGCGTGTG+AGG | - | tig0035626:13030-13049 | Msa1455250:intron | 50.0% | |
| ! | GCAGTCTAAAACCCCTAGCT+TGG | - | tig0035626:13156-13175 | Msa1455250:intron | 50.0% |
| ACGATCACAGGTATGTAGGC+TGG | + | tig0035626:13224-13243 | Msa1455250:intergenic | 50.0% | |
| AGTTCCCGGATCCAATCTCT+TGG | + | tig0035626:13399-13418 | Msa1455250:intergenic | 50.0% | |
| GAACGCAAGAAAGGAACAGG+AGG | - | tig0035626:13429-13448 | Msa1455250:intron | 50.0% | |
| ! | AGCTCCAGAGAAGTTTGCTC+AGG | - | tig0035626:13619-13638 | Msa1455250:CDS | 50.0% |
| TGTGCCTGAGCAAACTTCTC+TGG | + | tig0035626:13626-13645 | Msa1455250:intergenic | 50.0% | |
| CTTCGTCTCCTCTCCAATGT+TGG | + | tig0035626:14289-14308 | Msa1455250:intergenic | 50.0% | |
| GGAGACGAAGTCAAGAGTAG+AGG | - | tig0035626:14299-14318 | Msa1455250:intron | 50.0% | |
| AGAGTGGGGAGAGAAATGGA+GGG | + | tig0035626:14345-14364 | Msa1455250:intergenic | 50.0% | |
| TAGAGTGGGGAGAGAAATGG+AGG | + | tig0035626:14346-14365 | Msa1455250:intergenic | 50.0% | |
| ! | GTGCTTGTGCGGTTGTCTTT+TGG | - | tig0035626:14521-14540 | Msa1455250:intron | 50.0% |
| GCCGACACAAACATTGGTCA+AGG | + | tig0035626:14914-14933 | Msa1455250:intergenic | 50.0% | |
| CACGAGTGGTTGAGCCATCA+CGG | + | tig0035626:5820-5839 | Msa1455250:intergenic | 55.0% | |
| GATGATGACCGCGACGATGA+AGG | - | tig0035626:5846-5865 | Msa1455250:three_prime_UTR | 55.0% | |
| GGGCAGTTCTTCAGGAAGCA+AGG | - | tig0035626:6415-6434 | Msa1455250:intron | 55.0% | |
| GATATCTCCCTCTGCAGACG+AGG | - | tig0035626:6819-6838 | Msa1455250:intron | 55.0% | |
| CAAGTCACCTCGTCTGCAGA+GGG | + | tig0035626:6829-6848 | Msa1455250:intergenic | 55.0% | |
| ACAAGTCACCTCGTCTGCAG+AGG | + | tig0035626:6830-6849 | Msa1455250:intergenic | 55.0% | |
| TATCACAGACGGAACCCTCC+TGG | - | tig0035626:7040-7059 | Msa1455250:intron | 55.0% | |
| CCGCTCAATTTGTGCCAGGA+GGG | + | tig0035626:7057-7076 | Msa1455250:intergenic | 55.0% | |
| CCCTCCTGGCACAAATTGAG+CGG | - | tig0035626:7054-7073 | Msa1455250:intron | 55.0% | |
| ACCGCTCAATTTGTGCCAGG+AGG | + | tig0035626:7058-7077 | Msa1455250:intergenic | 55.0% | |
| !! | GGTATTTCTGGCCGAGTGGA+TGG | + | tig0035626:8120-8139 | Msa1455250:intergenic | 55.0% |
| ATGTAGCCGATCCTGCCTAG+TGG | - | tig0035626:8547-8566 | Msa1455250:CDS | 55.0% | |
| TGTAGCCGATCCTGCCTAGT+GGG | - | tig0035626:8548-8567 | Msa1455250:CDS | 55.0% | |
| CATGTCCCACTAGGCAGGAT+CGG | + | tig0035626:8556-8575 | Msa1455250:intergenic | 55.0% | |
| CTTATCCCACTAGGCGGGAT+CGG | + | tig0035626:8619-8638 | Msa1455250:intergenic | 55.0% | |
| ! | CAAGCCTTATCCCACTAGGC+GGG | + | tig0035626:8624-8643 | Msa1455250:intergenic | 55.0% |
| ! | CCAAGCCTTATCCCACTAGG+CGG | + | tig0035626:8625-8644 | Msa1455250:intergenic | 55.0% |
| GCACGATTGCGCCTTCTCAA+AGG | - | tig0035626:8919-8938 | Msa1455250:CDS | 55.0% | |
| TCAGCTTCAGTGAGCTCCAC+AGG | + | tig0035626:11415-11434 | Msa1455250:intergenic | 55.0% | |
| !! | CTGAGGGAGTGCCAACACTT+GGG | - | tig0035626:11733-11752 | Msa1455250:intron | 55.0% |
| !! | TTTCAGGTTGACCCGACCAC+TGG | - | tig0035626:11886-11905 | Msa1455250:intron | 55.0% |
| TCTTCAGCCTCACCAGTGGT+CGG | + | tig0035626:11901-11920 | Msa1455250:intergenic | 55.0% | |
| CGATCTCCAGATCCTCTAGC+TGG | + | tig0035626:11945-11964 | Msa1455250:intergenic | 55.0% | |
| CACAAGGCTGCAAGCCAAGA+AGG | + | tig0035626:12110-12129 | Msa1455250:intergenic | 55.0% | |
| !! | TCTTGGCTTGCAGCCTTGTG+AGG | - | tig0035626:12110-12129 | Msa1455250:intron | 55.0% |
| ! | AGCCTTGTGAGGTAAGCCAG+TGG | - | tig0035626:12121-12140 | Msa1455250:intron | 55.0% |
| !! | CACCACTGGCTTACCTCACA+AGG | + | tig0035626:12126-12145 | Msa1455250:intergenic | 55.0% |
| GGCCGGCCAAACATCTTTAG+AGG | - | tig0035626:12806-12825 | Msa1455250:intron | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | + | tig0035626:12972-12991 | Msa1455250:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | tig0035626:12971-12990 | Msa1455250:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | tig0035626:12972-12991 | Msa1455250:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | tig0035626:12978-12997 | Msa1455250:intron | 55.0% | |
| TGCCTCACACGCCTTGACTT+AGG | + | tig0035626:13035-13054 | Msa1455250:intergenic | 55.0% | |
| CTCACCCTAACCAACTGAGC+TGG | - | tig0035626:13055-13074 | Msa1455250:intron | 55.0% | |
| AAAACCCCTAGCTTGGCCCT+TGG | - | tig0035626:13163-13182 | Msa1455250:intron | 55.0% | |
| AAACCCCTAGCTTGGCCCTT+GGG | - | tig0035626:13164-13183 | Msa1455250:intron | 55.0% | |
| AGGCTGGGGGAGAGTAACTT+TGG | + | tig0035626:13811-13830 | Msa1455250:intergenic | 55.0% | |
| GAGGCGCGTACAACTACAGT+AGG | - | tig0035626:14147-14166 | Msa1455250:intron | 55.0% | |
| ! | GCGAGTGCTGCCTTAGTCAG+TGG | - | tig0035626:7116-7135 | Msa1455250:intron | 60.0% |
| !! | TGCACTGGGTTTGCTGCACC+AGG | - | tig0035626:7324-7343 | Msa1455250:intron | 60.0% |
| !! | GTGGGGTATTTCTGGCCGAG+TGG | + | tig0035626:8124-8143 | Msa1455250:intergenic | 60.0% |
| GGTGGTTTGAGCATGCGTGG+AGG | - | tig0035626:8342-8361 | Msa1455250:intron | 60.0% | |
| ATGTAGCCGATCCCGCCTAG+TGG | - | tig0035626:8610-8629 | Msa1455250:CDS | 60.0% | |
| TGTAGCCGATCCCGCCTAGT+GGG | - | tig0035626:8611-8630 | Msa1455250:CDS | 60.0% | |
| CGATCCCGCCTAGTGGGATA+AGG | - | tig0035626:8617-8636 | Msa1455250:CDS | 60.0% | |
| CCGCCTAGTGGGATAAGGCT+TGG | - | tig0035626:8622-8641 | Msa1455250:CDS | 60.0% | |
| TGCCAGTGTGCTCACAGCAC+CGG | + | tig0035626:10367-10386 | Msa1455250:intergenic | 60.0% | |
| TCTTCTTTCGGCGGAGGGTG+AGG | + | tig0035626:10799-10818 | Msa1455250:intergenic | 60.0% | |
| !! | GGAGGAGCACCCAAACCAGT+TGG | + | tig0035626:11198-11217 | Msa1455250:intergenic | 60.0% |
| GGTTTGGGTGCTCCTCCAAG+TGG | - | tig0035626:11201-11220 | Msa1455250:intron | 60.0% | |
| ! | GTTGATGGGGGACCACTTGG+AGG | + | tig0035626:11216-11235 | Msa1455250:intergenic | 60.0% |
| ! | GCTGTTGATGGGGGACCACT+TGG | + | tig0035626:11219-11238 | Msa1455250:intergenic | 60.0% |
| TTACCAGTCCTCAGCGCCTG+TGG | - | tig0035626:11396-11415 | Msa1455250:CDS | 60.0% | |
| !! | CCAAGTGTTGGCACTCCCTC+AGG | + | tig0035626:11735-11754 | Msa1455250:intergenic | 60.0% |
| !! | CCTGAGGGAGTGCCAACACT+TGG | - | tig0035626:11732-11751 | Msa1455250:intron | 60.0% |
| CTTCAGCCTCACCAGTGGTC+GGG | + | tig0035626:11900-11919 | Msa1455250:intergenic | 60.0% | |
| TCTTGGCCCAAGGGAGAGCT+TGG | - | tig0035626:12059-12078 | Msa1455250:intron | 60.0% | |
| CTTCGGCCAAGCTCTCCCTT+GGG | + | tig0035626:12068-12087 | Msa1455250:intergenic | 60.0% | |
| CTTTCGGCGGAGGGTGAGGA+GGG | + | tig0035626:10795-10814 | Msa1455250:intergenic | 65.0% | |
| TCTTTCGGCGGAGGGTGAGG+AGG | + | tig0035626:10796-10815 | Msa1455250:intergenic | 65.0% | |
| ! | AGTGAGCTCCACAGGCGCTG+AGG | + | tig0035626:11407-11426 | Msa1455250:intergenic | 65.0% |
| GGTTGACCCGACCACTGGTG+AGG | - | tig0035626:11891-11910 | Msa1455250:intron | 65.0% | |
| GGGCCCTGATTGTGAGCGAG+TGG | - | tig0035626:12026-12045 | Msa1455250:intron | 65.0% | |
| GCTTCGGCCAAGCTCTCCCT+TGG | + | tig0035626:12069-12088 | Msa1455250:intergenic | 65.0% | |
| TGTACTCAGGGCCGGCCCAA+GGG | + | tig0035626:13182-13201 | Msa1455250:intergenic | 65.0% | |
| TTGTACTCAGGGCCGGCCCA+AGG | + | tig0035626:13183-13202 | Msa1455250:intergenic | 65.0% | |
| !! | GGCCGGTGCTGTGAGCACAC+TGG | - | tig0035626:10362-10381 | Msa1455250:CDS | 70.0% |
| !! | GCTCCACAGGCGCTGAGGAC+TGG | + | tig0035626:11402-11421 | Msa1455250:intergenic | 70.0% |
| CGGCCCAAGGGCCAAGCTAG+GGG | + | tig0035626:13170-13189 | Msa1455250:intergenic | 70.0% | |
| CCGGCCCAAGGGCCAAGCTA+GGG | + | tig0035626:13171-13190 | Msa1455250:intergenic | 70.0% | |
| CCCTAGCTTGGCCCTTGGGC+CGG | - | tig0035626:13168-13187 | Msa1455250:intron | 70.0% | |
| !! | GTGGGCTGTGCAGGGTACCG+AGG | - | tig0035626:14433-14452 | Msa1455250:intron | 70.0% |
| GCCGGCCCAAGGGCCAAGCT+AGG | + | tig0035626:13172-13191 | Msa1455250:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0035626 | gene | 5646 | 15023 | 5646 | ID=Msa1455250;Name=Msa1455250 |
| tig0035626 | mRNA | 5646 | 15023 | 5646 | ID=Msa1455250-mRNA-1;Parent=Msa1455250;Name=Msa1455250-mRNA-1;_AED=0.10;_eAED=0.10;_QI=176|1|1|1|1|1|18|383|887 |
| tig0035626 | exon | 5646 | 6223 | 5646 | ID=Msa1455250-mRNA-1:exon:20198;Parent=Msa1455250-mRNA-1 |
| tig0035626 | exon | 8538 | 8777 | 8538 | ID=Msa1455250-mRNA-1:exon:20197;Parent=Msa1455250-mRNA-1 |
| tig0035626 | exon | 8878 | 9051 | 8878 | ID=Msa1455250-mRNA-1:exon:20196;Parent=Msa1455250-mRNA-1 |
| tig0035626 | exon | 9135 | 9266 | 9135 | ID=Msa1455250-mRNA-1:exon:20195;Parent=Msa1455250-mRNA-1 |
| tig0035626 | exon | 9367 | 9564 | 9367 | ID=Msa1455250-mRNA-1:exon:20194;Parent=Msa1455250-mRNA-1 |
| tig0035626 | exon | 9634 | 9774 | 9634 | ID=Msa1455250-mRNA-1:exon:20193;Parent=Msa1455250-mRNA-1 |
| tig0035626 | exon | 10086 | 10136 | 10086 | ID=Msa1455250-mRNA-1:exon:20192;Parent=Msa1455250-mRNA-1 |
| tig0035626 | exon | 10253 | 10408 | 10253 | ID=Msa1455250-mRNA-1:exon:20191;Parent=Msa1455250-mRNA-1 |
| tig0035626 | exon | 10507 | 10678 | 10507 | ID=Msa1455250-mRNA-1:exon:20190;Parent=Msa1455250-mRNA-1 |
| tig0035626 | exon | 10790 | 11040 | 10790 | ID=Msa1455250-mRNA-1:exon:20189;Parent=Msa1455250-mRNA-1 |
| tig0035626 | exon | 11221 | 11454 | 11221 | ID=Msa1455250-mRNA-1:exon:20188;Parent=Msa1455250-mRNA-1 |
| tig0035626 | exon | 11531 | 11638 | 11531 | ID=Msa1455250-mRNA-1:exon:20187;Parent=Msa1455250-mRNA-1 |
| tig0035626 | exon | 13324 | 13425 | 13324 | ID=Msa1455250-mRNA-1:exon:20186;Parent=Msa1455250-mRNA-1 |
| tig0035626 | exon | 13515 | 13715 | 13515 | ID=Msa1455250-mRNA-1:exon:20185;Parent=Msa1455250-mRNA-1 |
| tig0035626 | exon | 13829 | 13942 | 13829 | ID=Msa1455250-mRNA-1:exon:20184;Parent=Msa1455250-mRNA-1 |
| tig0035626 | exon | 14027 | 14077 | 14027 | ID=Msa1455250-mRNA-1:exon:20183;Parent=Msa1455250-mRNA-1 |
| tig0035626 | exon | 14190 | 14287 | 14190 | ID=Msa1455250-mRNA-1:exon:20182;Parent=Msa1455250-mRNA-1 |
| tig0035626 | exon | 14802 | 15023 | 14802 | ID=Msa1455250-mRNA-1:exon:20181;Parent=Msa1455250-mRNA-1 |
| tig0035626 | five_prime_UTR | 14848 | 15023 | 14848 | ID=Msa1455250-mRNA-1:five_prime_utr;Parent=Msa1455250-mRNA-1 |
| tig0035626 | CDS | 14802 | 14847 | 14802 | ID=Msa1455250-mRNA-1:cds;Parent=Msa1455250-mRNA-1 |
| tig0035626 | CDS | 14190 | 14287 | 14190 | ID=Msa1455250-mRNA-1:cds;Parent=Msa1455250-mRNA-1 |
| tig0035626 | CDS | 14027 | 14077 | 14027 | ID=Msa1455250-mRNA-1:cds;Parent=Msa1455250-mRNA-1 |
| tig0035626 | CDS | 13829 | 13942 | 13829 | ID=Msa1455250-mRNA-1:cds;Parent=Msa1455250-mRNA-1 |
| tig0035626 | CDS | 13515 | 13715 | 13515 | ID=Msa1455250-mRNA-1:cds;Parent=Msa1455250-mRNA-1 |
| tig0035626 | CDS | 13324 | 13425 | 13324 | ID=Msa1455250-mRNA-1:cds;Parent=Msa1455250-mRNA-1 |
| tig0035626 | CDS | 11531 | 11638 | 11531 | ID=Msa1455250-mRNA-1:cds;Parent=Msa1455250-mRNA-1 |
| tig0035626 | CDS | 11221 | 11454 | 11221 | ID=Msa1455250-mRNA-1:cds;Parent=Msa1455250-mRNA-1 |
| tig0035626 | CDS | 10790 | 11040 | 10790 | ID=Msa1455250-mRNA-1:cds;Parent=Msa1455250-mRNA-1 |
| tig0035626 | CDS | 10507 | 10678 | 10507 | ID=Msa1455250-mRNA-1:cds;Parent=Msa1455250-mRNA-1 |
| tig0035626 | CDS | 10253 | 10408 | 10253 | ID=Msa1455250-mRNA-1:cds;Parent=Msa1455250-mRNA-1 |
| tig0035626 | CDS | 10086 | 10136 | 10086 | ID=Msa1455250-mRNA-1:cds;Parent=Msa1455250-mRNA-1 |
| tig0035626 | CDS | 9634 | 9774 | 9634 | ID=Msa1455250-mRNA-1:cds;Parent=Msa1455250-mRNA-1 |
| tig0035626 | CDS | 9367 | 9564 | 9367 | ID=Msa1455250-mRNA-1:cds;Parent=Msa1455250-mRNA-1 |
| tig0035626 | CDS | 9135 | 9266 | 9135 | ID=Msa1455250-mRNA-1:cds;Parent=Msa1455250-mRNA-1 |
| tig0035626 | CDS | 8878 | 9051 | 8878 | ID=Msa1455250-mRNA-1:cds;Parent=Msa1455250-mRNA-1 |
| tig0035626 | CDS | 8538 | 8777 | 8538 | ID=Msa1455250-mRNA-1:cds;Parent=Msa1455250-mRNA-1 |
| tig0035626 | CDS | 6029 | 6223 | 6029 | ID=Msa1455250-mRNA-1:cds;Parent=Msa1455250-mRNA-1 |
| tig0035626 | three_prime_UTR | 5646 | 6028 | 5646 | ID=Msa1455250-mRNA-1:three_prime_utr;Parent=Msa1455250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
