AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0523520


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0523520 MtrunA17_Chr3g0144501 99.549 887 4 0 1 887 1 887 0.0 1812
Msa0523520 MtrunA17_Chr4g0034881 90.090 888 84 2 1 887 1 885 0.0 1627
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0523520 AT4G34450.1 84.442 887 137 1 1 887 1 886 0.0 1560
Msa0523520 AT2G16200.1 60.870 69 27 0 819 887 1 69 6.50e-24 96.3
Msa0523520 AT2G16200.2 61.538 65 25 0 823 887 19 83 2.92e-22 92.0

Find 223 sgRNAs with CRISPR-Local

Find 649 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTCCTGAGTAACATTCTT+AGG 0.185985 3_4:-76893947 Msa0523520:CDS
TTTGTCCCTTACTGCATTCT+TGG 0.197372 3_4:-76889164 Msa0523520:three_prime_UTR
TTCTTGTTATTCTCTTTCTC+TGG 0.216442 3_4:-76898226 Msa0523520:five_prime_UTR
CTCCAAGTGTGTTTAGATAA+AGG 0.246814 3_4:+76893028 None:intergenic
GTGCTTGTGCGGTTGTCTTT+TGG 0.261791 3_4:-76889415 Msa0523520:CDS
AATACTGTCATCAACCTTCT+TGG 0.299187 3_4:-76891846 Msa0523520:CDS
TGCTGCAGTTGATGAGTTAA+AGG 0.303960 3_4:-76893548 Msa0523520:intron
CAAGTGTATGAACCTTAAAA+AGG 0.314495 3_4:+76892646 None:intergenic
AATTTCATTGCAACATCCTT+TGG 0.320288 3_4:+76889382 None:intergenic
ATCCCTGATGCAAAGGAAAC+AGG 0.331509 3_4:-76893861 Msa0523520:CDS
GTGTGGCAATGCTTCTGTTC+TGG 0.335873 3_4:+76894249 None:intergenic
CAAATCCTGAAATTGTAAAA+AGG 0.336682 3_4:-76896704 Msa0523520:CDS
CACTAACTGCAACATTGATA+TGG 0.336809 3_4:-76894288 Msa0523520:CDS
CCCTTTCATGGGAATTGAAA+AGG 0.339316 3_4:-76897557 Msa0523520:CDS
AGTCTAAAGATATGGGATTA+AGG 0.341479 3_4:-76897179 Msa0523520:CDS
ATTCCAGAGTTTGCAAACTT+TGG 0.345897 3_4:-76892672 Msa0523520:CDS
GCTGTAAAGGACTTCCTGTT+TGG 0.348577 3_4:-76892976 Msa0523520:CDS
GCTGCTATACCTACTGAATC+AGG 0.351960 3_4:-76897346 Msa0523520:CDS
TTCCAGAGTTTGCAAACTTT+GGG 0.353146 3_4:-76892671 Msa0523520:CDS
AACCCTGTTTCCTTTGCATC+AGG 0.353442 3_4:+76893858 None:intergenic
AGCTGAGTATTCCCCTTTCA+TGG 0.357213 3_4:-76897569 Msa0523520:CDS
TAATGAGATTGGATTTAATC+AGG 0.362311 3_4:-76889248 Msa0523520:three_prime_UTR
GGTTGGGATTTGACTTCCTT+GGG 0.363696 3_4:+76892798 None:intergenic
TAATTGCTGGATTTAATTCT+CGG 0.364724 3_4:+76894588 None:intergenic
TCCAAGTGTGTTTAGATAAA+GGG 0.365379 3_4:+76893029 None:intergenic
TTTCTTCTCTGCAAGTGGTT+GGG 0.373606 3_4:+76892782 None:intergenic
AAGGTGGAGCAATGAGGTTC+AGG 0.374504 3_4:-76896685 Msa0523520:CDS
TGATATCCCGCTTGTCAATC+TGG 0.376165 3_4:-76892947 Msa0523520:CDS
GCTTCGGCCAAGCTCTCCCT+TGG 0.377356 3_4:+76891873 None:intergenic
CTTTCTTCTCTGCAAGTGGT+TGG 0.377425 3_4:+76892781 None:intergenic
TTGTTGTCGGGTGTATTCAT+AGG 0.378216 3_4:-76889448 Msa0523520:CDS
TAAAGAATTACAAAACTATT+CGG 0.378988 3_4:-76889207 Msa0523520:three_prime_UTR
CCAAGTGTTGGCACTCCCTC+AGG 0.379387 3_4:+76892207 None:intergenic
AAGGCAGCACTTGCAACAAT+TGG 0.379505 3_4:+76896842 None:intergenic
ACCATAGATACTACACTTCC+TGG 0.389860 3_4:-76893689 Msa0523520:intron
AAGTGTATTCCAATAGTTAT+AGG 0.393001 3_4:+76889106 Msa0523510:intron
TCATCCACTCGCTCACAATC+AGG 0.394231 3_4:+76891909 None:intergenic
CATCACGGTAGCTGAATCTC+AGG 0.396731 3_4:+76898145 None:intergenic
TGGTTGGGATTTGACTTCCT+TGG 0.403046 3_4:+76892797 None:intergenic
ACATGTGTGTGATCTTGAAT+TGG 0.404356 3_4:+76889471 None:intergenic
AGCTGAAGAACAGTAATTGC+TGG 0.405937 3_4:+76894575 None:intergenic
TCTTGTTATTCTCTTTCTCT+GGG 0.407110 3_4:-76898225 Msa0523520:five_prime_UTR
TGATATGCATCAGCTGTTGA+TGG 0.408594 3_4:+76892711 None:intergenic
TGAATACCAGCTAGAGGATC+TGG 0.409994 3_4:-76892003 Msa0523520:CDS
ACTCTCAAGAAAATCATAGA+AGG 0.412468 3_4:+76894685 None:intergenic
TCAGGAAATAATACACAGTC+AGG 0.414520 3_4:-76894716 Msa0523520:CDS
AATGGTGTATCTGATGATAA+AGG 0.416830 3_4:-76897154 Msa0523520:CDS
TTCCCAAAGTTTGCAAACTC+TGG 0.416924 3_4:+76892669 None:intergenic
CCTTTCATGGGAATTGAAAA+GGG 0.417082 3_4:-76897556 Msa0523520:CDS
TGGCTAGCGGATAATCTATC+AGG 0.417740 3_4:-76889309 Msa0523520:exon
CTGTAAAGGACTTCCTGTTT+GGG 0.418816 3_4:-76892975 Msa0523520:CDS
TTGTAGGTTATCTGTGAGTC+AGG 0.421092 3_4:-76894734 Msa0523520:intron
ATCTGTCCAGGTGAATCATA+TGG 0.426484 3_4:+76892249 None:intergenic
TGCACTGGGTTTGCTGCACC+AGG 0.428277 3_4:-76896625 Msa0523520:intron
TGTATTCATAGGAAATATAA+AGG 0.434356 3_4:-76889437 Msa0523520:CDS
GAATTACAAAACTATTCGGT+TGG 0.435782 3_4:-76889203 Msa0523520:three_prime_UTR
AAAGAAAACTTCTGTGGCTT+CGG 0.436034 3_4:+76897221 None:intergenic
ACAGCAGCAAATCTTAAAAC+TGG 0.438071 3_4:+76894533 None:intergenic
ACATGTTCTAATAATTGCTC+TGG 0.438709 3_4:+76892425 None:intergenic
CTACACTTCCTGGGAATTGA+AGG 0.445284 3_4:-76893679 Msa0523520:CDS
TCGTGTTTGTGCAGTTGTAC+TGG 0.450538 3_4:+76892450 None:intergenic
TTAATCCCATATCTTTAGAC+TGG 0.453175 3_4:+76897181 None:intergenic
GTGAGCACACTGGCAAAGTT+TGG 0.453513 3_4:-76893571 Msa0523520:CDS
AATGTTGGGCCTATAACTAT+TGG 0.461648 3_4:-76889115 Msa0523520:three_prime_UTR
TAGATGAATGCCACTGACTA+AGG 0.465517 3_4:+76896823 None:intergenic
ACAAAGGCTTACCTTGTTCA+AGG 0.466919 3_4:+76894505 None:intergenic
CTTCGGCCAAGCTCTCCCTT+GGG 0.468883 3_4:+76891874 None:intergenic
TTTCCTGAGTAACATTCTTA+GGG 0.469038 3_4:-76893946 Msa0523520:CDS
TGCAGTTAGTGACTGATGTT+GGG 0.469707 3_4:+76894300 None:intergenic
CCTGAGGGAGTGCCAACACT+TGG 0.469769 3_4:-76892207 Msa0523520:CDS
GGATATCAAATGGCCCAAAC+AGG 0.470482 3_4:+76892962 None:intergenic
GATGACAGTATTTACAGCTT+CGG 0.472343 3_4:+76891857 None:intergenic
TGGTAGACTAGCAACGATAC+TGG 0.472490 3_4:-76889144 Msa0523520:three_prime_UTR
AATTACAAAACTATTCGGTT+GGG 0.473266 3_4:-76889202 Msa0523520:three_prime_UTR
TGGAAGAGACTTGAGAGGCT+TGG 0.479961 3_4:+76892269 None:intergenic
GATATGCATCAGCTGTTGAT+GGG 0.483197 3_4:+76892712 None:intergenic
ATGATCCACAATTAGATGCT+AGG 0.484554 3_4:-76897504 Msa0523520:CDS
ATCACACACATGTTTGTTGT+CGG 0.484824 3_4:-76889461 Msa0523520:CDS
TGTCACAAGCTCTCTTATGA+AGG 0.484923 3_4:-76896987 Msa0523520:CDS
ATCAACAGGCACTGGGCTAA+AGG 0.485148 3_4:+76894843 None:intergenic
ATGAAACGAATATATTTGCT+AGG 0.487145 3_4:+76893640 None:intergenic
TGTGAGCGAGTGGATGAGTA+TGG 0.487810 3_4:-76891903 Msa0523520:CDS
TCACACACATGTTTGTTGTC+GGG 0.490724 3_4:-76889460 Msa0523520:CDS
TGTTCAGGTTATCGTAATTG+TGG 0.491311 3_4:-76892328 Msa0523520:intron
CTTCAGCCTCACCAGTGGTC+GGG 0.493984 3_4:+76892042 None:intergenic
GATGATGACCGCGACGATGA+AGG 0.496667 3_4:-76898101 Msa0523520:intron
TCTTGGCCCAAGGGAGAGCT+TGG 0.497009 3_4:-76891880 Msa0523520:CDS
TCAGCTTCAGTGAGCTCCAC+AGG 0.501358 3_4:+76892527 None:intergenic
CAGTGGCATTCATCTACTAC+AGG 0.502394 3_4:-76896816 Msa0523520:intron
CTAAACACACTTGGAGGTGA+TGG 0.503784 3_4:-76893021 Msa0523520:CDS
CCTACGTCACAAGTCAGAAA+TGG 0.504171 3_4:-76894660 Msa0523520:CDS
CGATACTGGAAGTATAATGT+TGG 0.504361 3_4:-76889130 Msa0523520:three_prime_UTR
TGTAACGAATCAACAGGCAC+TGG 0.507041 3_4:+76894835 None:intergenic
GAGGCTTTCTTCTCTGCAAG+TGG 0.508958 3_4:+76892777 None:intergenic
GTTGATTCGTTACACAAGTC+AGG 0.509253 3_4:-76894826 Msa0523520:intron
AGCAGATTACACATTGAAAG+TGG 0.510396 3_4:-76891970 Msa0523520:CDS
TGAGACTGATAAAGCTGTAA+AGG 0.512160 3_4:-76892989 Msa0523520:CDS
CTTTATCTAAACACACTTGG+AGG 0.512500 3_4:-76893027 Msa0523520:CDS
GAATGAATGCACAACTCACT+CGG 0.514915 3_4:+76898183 None:intergenic
AGTAACATTCTTAGGGAAGA+AGG 0.515461 3_4:-76893939 Msa0523520:CDS
CGAGTGGATGAGTATGGTCT+TGG 0.517300 3_4:-76891897 Msa0523520:CDS
ATTGAGCTCTGTAATAGCTC+TGG 0.517722 3_4:+76894622 None:intergenic
CACAAGGCTGCAAGCCAAGA+AGG 0.517906 3_4:+76891832 None:intergenic
TTAGAAAATTTCCCAAGTGT+TGG 0.518435 3_4:+76892195 None:intergenic
TTTGTACAGTTTCATGCACT+GGG 0.519283 3_4:-76896639 Msa0523520:CDS
TTGACAAGCGGGATATCAAA+TGG 0.520695 3_4:+76892952 None:intergenic
TCTTGGCTTGCAGCCTTGTG+AGG 0.521858 3_4:-76891829 Msa0523520:intron
AGATGCTAGGAGATGCTCAC+AGG 0.523187 3_4:-76897491 Msa0523520:intron
TGCCAGTGTGCTCACAGCAC+CGG 0.525008 3_4:+76893579 None:intergenic
ACCCTTTATCTAAACACACT+TGG 0.526555 3_4:-76893030 Msa0523520:CDS
AGCTTGTTAGCAGCTTGACA+AGG 0.527263 3_4:-76894881 Msa0523520:CDS
CAGGAATGCATGGGAAAGCA+TGG 0.529009 3_4:-76891934 Msa0523520:CDS
CTTCCCTAAGAATGTTACTC+AGG 0.529688 3_4:+76893943 None:intergenic
GGGCGGTTCTTCAGGAAGCA+AGG 0.530156 3_4:-76897534 Msa0523520:CDS
TTGCAGTTAGTGACTGATGT+TGG 0.530937 3_4:+76894299 None:intergenic
TTTCAGGTTGACCCGACCAC+TGG 0.531469 3_4:-76892053 Msa0523520:intron
AATACCGCTCAATTTGTGCC+AGG 0.533594 3_4:+76896891 None:intergenic
TCCCTGATGCAAAGGAAACA+GGG 0.533650 3_4:-76893860 Msa0523520:CDS
AGAGAATAACAAGAAGAAGA+AGG 0.536117 3_4:+76898234 None:intergenic
TATCTAATTTCAGGAATGCA+TGG 0.536835 3_4:-76891944 Msa0523520:CDS
AGATATGGGATTAAGGAGAA+TGG 0.538106 3_4:-76897172 Msa0523520:CDS
GATACTGGAAGTATAATGTT+GGG 0.538272 3_4:-76889129 Msa0523520:three_prime_UTR
CGATCTCCAGATCCTCTAGC+TGG 0.539710 3_4:+76891997 None:intergenic
GCTAGCCACAATCTCATGAA+TGG 0.540300 3_4:+76889324 None:intergenic
TCTTCAGCCTCACCAGTGGT+CGG 0.543872 3_4:+76892041 None:intergenic
TGCAGATACGACAGAATGAT+CGG 0.545783 3_4:-76894917 Msa0523520:intron
TATCACAGACGGAACCCTCC+TGG 0.546089 3_4:-76896909 Msa0523520:CDS
ATCACTGACAGTTTCATCCT+CGG 0.547476 3_4:+76889348 None:intergenic
GACTTGTGTAACGAATCAAC+AGG 0.547682 3_4:+76894829 None:intergenic
ATGAGTATGGTCTTGGCCCA+AGG 0.547932 3_4:-76891890 Msa0523520:CDS
TGAAACGAATATATTTGCTA+GGG 0.549359 3_4:+76893641 None:intergenic
TCATCATCTTTCTTCACGAG+TGG 0.549801 3_4:+76898116 None:intergenic
AAAGTTTGCAAACTCTGGAA+TGG 0.551843 3_4:+76892674 None:intergenic
TGCTGTTCGCACCTTGAACA+AGG 0.552650 3_4:-76894516 Msa0523520:intron
TTACCAGTCCTCAGCGCCTG+TGG 0.552709 3_4:-76892543 Msa0523520:intron
GGCGGTTCTTCAGGAAGCAA+GGG 0.555669 3_4:-76897533 Msa0523520:CDS
ACCCTGTTTCCTTTGCATCA+GGG 0.556360 3_4:+76893859 None:intergenic
ATGTCAAAAGCCTCTTCTGA+AGG 0.557152 3_4:+76892831 None:intergenic
TAGTCTCCAGATTGACAAGC+GGG 0.559078 3_4:+76892941 None:intergenic
CATGTGTGTGATCTTGAATT+GGG 0.562867 3_4:+76889472 None:intergenic
GCTGAGTATTCCCCTTTCAT+GGG 0.563911 3_4:-76897568 Msa0523520:CDS
TAGAGAAATCCCTGATGCAA+AGG 0.564716 3_4:-76893868 Msa0523520:CDS
GCAGATTACACATTGAAAGT+GGG 0.566190 3_4:-76891969 Msa0523520:CDS
CACCACTGGCTTACCTCACA+AGG 0.566963 3_4:+76891816 None:intergenic
AGTCTACCAAGAATGCAGTA+AGG 0.567615 3_4:+76889158 Msa0523510:CDS
CATCCACTCGCTCACAATCA+GGG 0.568503 3_4:+76891910 None:intergenic
ATCTAATTTCAGGAATGCAT+GGG 0.569745 3_4:-76891943 Msa0523520:CDS
CCGCTCAATTTGTGCCAGGA+GGG 0.571229 3_4:+76896895 None:intergenic
TGACATTGATTCTGTGCCCA+AGG 0.571264 3_4:-76892814 Msa0523520:CDS
CCATAGATACTACACTTCCT+GGG 0.571583 3_4:-76893688 Msa0523520:intron
CACGAGTGGTTGAGCCATCA+CGG 0.572119 3_4:+76898130 None:intergenic
TGAGTATGGTCTTGGCCCAA+GGG 0.575644 3_4:-76891889 Msa0523520:CDS
CTCTCAAGAAAATCATAGAA+GGG 0.578640 3_4:+76894686 None:intergenic
CTTGCAGAGAAGAAAGCCTC+TGG 0.580181 3_4:-76892774 Msa0523520:CDS
CATCTCCTAGCATCTAATTG+TGG 0.589567 3_4:+76897499 None:intergenic
GTTTGCAAACTCTGGAATGG+AGG 0.589800 3_4:+76892677 None:intergenic
AAGTGTAGTAATAGCAAGTG+TGG 0.589942 3_4:+76894232 None:intergenic
ATTACAGGAGCCTTCAGAAG+AGG 0.591072 3_4:-76892841 Msa0523520:intron
GACGACACAAACATTGGTCA+AGG 0.591081 3_4:+76889025 Msa0523510:intron
TCTGAAGTTTATTGTTCGAG+AGG 0.592844 3_4:-76892169 Msa0523520:intron
GAGAATGCAACAGTGAGGGC+CGG 0.593593 3_4:-76893598 Msa0523520:CDS
CTGCTATACCTACTGAATCA+GGG 0.594281 3_4:-76897345 Msa0523520:CDS
CTGAGGGAGTGCCAACACTT+GGG 0.595169 3_4:-76892206 Msa0523520:CDS
TCTTGAGAATGCAACAGTGA+GGG 0.598523 3_4:-76893602 Msa0523520:CDS
GTCTACCAAGAATGCAGTAA+GGG 0.599744 3_4:+76889159 Msa0523510:CDS
GCTTGTTAGCAGCTTGACAA+GGG 0.599912 3_4:-76894880 Msa0523520:CDS
GACAGGAAATGAATCAAGTG+TGG 0.601757 3_4:-76894204 Msa0523520:CDS
CTGAGATTCAGCTACCGTGA+TGG 0.604195 3_4:-76898144 Msa0523520:exon
AATGAATGCACAACTCACTC+GGG 0.605082 3_4:+76898184 None:intergenic
ACCGCTCAATTTGTGCCAGG+AGG 0.606317 3_4:+76896894 None:intergenic
AGAGCTATTACAGAGCTCAA+TGG 0.608497 3_4:-76894620 Msa0523520:CDS
GTAACGAATCAACAGGCACT+GGG 0.608764 3_4:+76894836 None:intergenic
CAAGTCACCTCGTCTGCAGA+GGG 0.609015 3_4:+76897123 None:intergenic
GGAGGAGCACCCAAACCAGT+TGG 0.609607 3_4:+76892744 None:intergenic
ACAAGTCACCTCGTCTGCAG+AGG 0.609964 3_4:+76897122 None:intergenic
CAGATTACACATTGAAAGTG+GGG 0.612267 3_4:-76891968 Msa0523520:CDS
TCTCTTCCATATGATTCACC+TGG 0.612987 3_4:-76892255 Msa0523520:CDS
AGGAATGCATGGGAAAGCAT+GGG 0.615686 3_4:-76891933 Msa0523520:CDS
AAGTCTCTCCCTGATTCAGT+AGG 0.615879 3_4:+76897337 None:intergenic
GAAATATAAAGGTGCTTGTG+CGG 0.616618 3_4:-76889426 Msa0523520:CDS
GTGGCATTTGAGAAGCCTGA+GGG 0.617748 3_4:-76892222 Msa0523520:CDS
ACTGGTGAGGCTGAAGATGA+TGG 0.618692 3_4:-76892035 Msa0523520:CDS
ATATGCATCAGCTGTTGATG+GGG 0.619854 3_4:+76892713 None:intergenic
CTTTCATGGGAATTGAAAAG+GGG 0.620518 3_4:-76897555 Msa0523520:CDS
GATATCTCCCTCTGCAGACG+AGG 0.620675 3_4:-76897130 Msa0523520:intron
CAGGAAATAATACACAGTCA+GGG 0.625927 3_4:-76894715 Msa0523520:CDS
GATACGACACAGCACTCGAA+TGG 0.627712 3_4:+76896928 None:intergenic
GGTTTGGGTGCTCCTCCAAG+TGG 0.630511 3_4:-76892738 Msa0523520:CDS
AACATTCTTAGGGAAGAAGG+TGG 0.632595 3_4:-76893936 Msa0523520:CDS
TGTTAGCAGCTTGACAAGGG+GGG 0.633188 3_4:-76894877 Msa0523520:CDS
GGGCCCTGATTGTGAGCGAG+TGG 0.633246 3_4:-76891913 Msa0523520:CDS
TGATGCCATTCATGAGATTG+TGG 0.633282 3_4:-76889329 Msa0523520:CDS
CTTGTTAGCAGCTTGACAAG+GGG 0.635426 3_4:-76894879 Msa0523520:CDS
AGTGAGCTCCACAGGCGCTG+AGG 0.636968 3_4:+76892535 None:intergenic
CAAGAAAATCATAGAAGGGG+CGG 0.644100 3_4:+76894690 None:intergenic
CCCTCCTGGCACAAATTGAG+CGG 0.644481 3_4:-76896895 Msa0523520:CDS
TCATATGGAAGAGACTTGAG+AGG 0.644642 3_4:+76892264 None:intergenic
AGGAAATAATACACAGTCAG+GGG 0.645045 3_4:-76894714 Msa0523520:CDS
GCAAGTGCTGCCTTAGTCAG+TGG 0.646407 3_4:-76896833 Msa0523520:CDS
TGAATTGGGTGGAACAACCT+CGG 0.646733 3_4:+76889486 None:intergenic
TACACTTCCTGGGAATTGAA+GGG 0.647378 3_4:-76893678 Msa0523520:CDS
TCTCAAGAAAATCATAGAAG+GGG 0.647603 3_4:+76894687 None:intergenic
GGTTGACCCGACCACTGGTG+AGG 0.653086 3_4:-76892048 Msa0523520:CDS
CCATTTCTGACTTGTGACGT+AGG 0.654222 3_4:+76894660 None:intergenic
TTGTTAGCAGCTTGACAAGG+GGG 0.655135 3_4:-76894878 Msa0523520:CDS
TGTGGCATTTGAGAAGCCTG+AGG 0.655854 3_4:-76892223 Msa0523520:CDS
GAAATTGACTGTCAGATCCG+AGG 0.656407 3_4:-76889365 Msa0523520:CDS
ATCATCTTCAGCCTCACCAG+TGG 0.659428 3_4:+76892037 None:intergenic
TGAAGATGAATACCAGCTAG+AGG 0.659647 3_4:-76892009 Msa0523520:CDS
GGCCGGTGCTGTGAGCACAC+TGG 0.659994 3_4:-76893581 Msa0523520:CDS
GACAGCAAAGAAAACTTCTG+TGG 0.662155 3_4:+76897215 None:intergenic
GTGTGTGATCTTGAATTGGG+TGG 0.662717 3_4:+76889475 None:intergenic
GTGGGCTGTGCAGGGTACCG+AGG 0.663992 3_4:-76889503 Msa0523520:intron
CTTAGCAAAACAAATATGCG+CGG 0.667793 3_4:+76893410 None:intergenic
GTGCTGTGTCGTATCACAGA+CGG 0.669972 3_4:-76896920 Msa0523520:CDS
ATCACGGTAGCTGAATCTCA+GGG 0.672400 3_4:+76898146 None:intergenic
ATCTTGAGAATGCAACAGTG+AGG 0.681270 3_4:-76893603 Msa0523520:CDS
CTAGTCTCCAGATTGACAAG+CGG 0.684081 3_4:+76892940 None:intergenic
ATTCATGAGATTGTGGCTAG+CGG 0.684649 3_4:-76889322 Msa0523520:CDS
AGATTACACATTGAAAGTGG+GGG 0.686745 3_4:-76891967 Msa0523520:CDS
TTTCATGGGAATTGAAAAGG+GGG 0.693546 3_4:-76897554 Msa0523520:CDS
GTTCACTTATCTGTCTACGC+AGG 0.694862 3_4:-76893802 Msa0523520:intron
TATGCATCAGCTGTTGATGG+GGG 0.711908 3_4:+76892714 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAAAAAAAA+AGG + chr3_4:76892231-76892250 None:intergenic 0.0%
!!! TATTTAAAATTTTAAAAATA+TGG - chr3_4:76894053-76894072 Msa0523520:intron 0.0%
!!! AAAATTTTAATAAATTGCAT+GGG + chr3_4:76891004-76891023 None:intergenic 10.0%
!! AATAAAATATATTTCACATT+AGG + chr3_4:76891087-76891106 None:intergenic 10.0%
!!! ATTAGTATAAATTCTAAAAA+GGG - chr3_4:76892270-76892289 Msa0523520:CDS 10.0%
!! AAAAATATATACCATTATAA+AGG + chr3_4:76895930-76895949 None:intergenic 10.0%
!! TAAAATAAAAAATAAACACA+AGG - chr3_4:76896156-76896175 Msa0523520:intron 10.0%
!!! AAAAAAAGAATTAAATTTTG+CGG - chr3_4:76896189-76896208 Msa0523520:intron 10.0%
!!! GAAATATATTTTAATTGTAT+TGG + chr3_4:76897535-76897554 None:intergenic 10.0%
!!! TATAGTTTTTTAGATTTGTA+TGG - chr3_4:76890151-76890170 Msa0523520:intron 15.0%
!!! GTGTTTTTTTCTTATAAATT+GGG + chr3_4:76890910-76890929 None:intergenic 15.0%
!!! AGTGTTTTTTTCTTATAAAT+TGG + chr3_4:76890911-76890930 None:intergenic 15.0%
!!! AAATTTTAATAAATTGCATG+GGG + chr3_4:76891003-76891022 None:intergenic 15.0%
!!! GAAAATTTTAATAAATTGCA+TGG + chr3_4:76891005-76891024 None:intergenic 15.0%
!! TACATTAAATATCTTAAAGA+AGG - chr3_4:76891212-76891231 Msa0523520:intron 15.0%
!! ACATTAAATATCTTAAAGAA+GGG - chr3_4:76891213-76891232 Msa0523520:intron 15.0%
!!! TCTAGAATATTAATAAGAAT+TGG - chr3_4:76891270-76891289 Msa0523520:intron 15.0%
!!! ATCTTTTTTTGCTTATAAAT+TGG - chr3_4:76891323-76891342 Msa0523520:intron 15.0%
!!! TCTTTTTTTGCTTATAAATT+GGG - chr3_4:76891324-76891343 Msa0523520:intron 15.0%
!!! CATTAGTATAAATTCTAAAA+AGG - chr3_4:76892269-76892288 Msa0523520:CDS 15.0%
!! CAAATATTATGAGAATATTT+AGG + chr3_4:76892845-76892864 None:intergenic 15.0%
!!! TAGTAGTTTTATAATACTTT+TGG - chr3_4:76893754-76893773 Msa0523520:intron 15.0%
!!! AGTAGTTTTATAATACTTTT+GGG - chr3_4:76893755-76893774 Msa0523520:intron 15.0%
!!! TGCTTTTTTTTTTTTATGTA+TGG - chr3_4:76894149-76894168 Msa0523520:CDS 15.0%
!! TAATAAAATATGGTTTATCA+TGG + chr3_4:76895569-76895588 None:intergenic 15.0%
!!! AACCATTTTTCAATAAAAAA+AGG - chr3_4:76896787-76896806 Msa0523520:intron 15.0%
!!! TACCTTTTTTTATTGAAAAA+TGG + chr3_4:76896792-76896811 None:intergenic 15.0%
!!! CAAATAAACAAGATTATTTT+TGG + chr3_4:76896985-76897004 None:intergenic 15.0%
!!! TATCTTCTAATTTTTATTTG+TGG - chr3_4:76897714-76897733 Msa0523520:intron 15.0%
!!! ATCTTCTAATTTTTATTTGT+GGG - chr3_4:76897715-76897734 Msa0523520:intron 15.0%
!! TAAAGAATTACAAAACTATT+CGG - chr3_4:76898029-76898048 Msa0523520:intron 15.0%
!!! TTAATGTAATATGAATTTTG+AGG - chr3_4:76898183-76898202 Msa0523520:five_prime_UTR 15.0%
!!! TTAAGTACATTTCTTTTAAG+AGG - chr3_4:76890811-76890830 Msa0523520:intron 20.0%
!!! TTTTTTCTTATAAATTGGGA+CGG + chr3_4:76890906-76890925 None:intergenic 20.0%
!!! AATTTTAATAAATTGCATGG+GGG + chr3_4:76891002-76891021 None:intergenic 20.0%
!! CTTGAAACTAAATAAACATA+TGG + chr3_4:76891058-76891077 None:intergenic 20.0%
!! TGTATAAATAATTAATGCAG+AGG + chr3_4:76891112-76891131 None:intergenic 20.0%
!! GTGTTAATTATAATATGCAT+CGG + chr3_4:76891138-76891157 None:intergenic 20.0%
!! AATTTGCCAAAAATATAACT+AGG + chr3_4:76891251-76891270 None:intergenic 20.0%
!! GAATATTAATAAGAATTGGT+TGG - chr3_4:76891274-76891293 Msa0523520:intron 20.0%
!!! TAAATTGAATTTTTCCATCA+TGG + chr3_4:76892139-76892158 None:intergenic 20.0%
!!! AAACATTTAGAGAAGTATTA+CGG + chr3_4:76892175-76892194 None:intergenic 20.0%
!! CTATCTTCTATTATATTTGT+AGG - chr3_4:76892486-76892505 Msa0523520:CDS 20.0%
!! AAACGAAATACTTATTCAAT+GGG + chr3_4:76892811-76892830 None:intergenic 20.0%
!! AAAACGAAATACTTATTCAA+TGG + chr3_4:76892812-76892831 None:intergenic 20.0%
!!! TTTGTTATTTTAATTGAGTG+CGG - chr3_4:76892883-76892902 Msa0523520:intron 20.0%
!!! ACAGAGATCTATATTTTAAT+GGG + chr3_4:76893155-76893174 None:intergenic 20.0%
!!! TACAGAGATCTATATTTTAA+TGG + chr3_4:76893156-76893175 None:intergenic 20.0%
!!! GTAGTTTTATAATACTTTTG+GGG - chr3_4:76893756-76893775 Msa0523520:intron 20.0%
!! AATAGAAAATCATCTTCTTT+CGG + chr3_4:76894104-76894123 None:intergenic 20.0%
!! TGAAAAATTATGTAAGTCTT+TGG - chr3_4:76894321-76894340 Msa0523520:intron 20.0%
!! AATTATATATATCCTTGTTC+AGG - chr3_4:76894893-76894912 Msa0523520:CDS 20.0%
!! ATAAAAATCCCATAAATAGA+GGG + chr3_4:76895101-76895120 None:intergenic 20.0%
!! AATAAAAATCCCATAAATAG+AGG + chr3_4:76895102-76895121 None:intergenic 20.0%
!!! ATATTTCAAGTGTAAAATCT+CGG - chr3_4:76895148-76895167 Msa0523520:intron 20.0%
!! GACATAAATGCTAAATAAAA+TGG + chr3_4:76895477-76895496 None:intergenic 20.0%
!! AAATAACTCTACCTTTATAA+TGG - chr3_4:76895916-76895935 Msa0523520:intron 20.0%
!!! AACTAAAATGAATTTTCTTG+AGG - chr3_4:76896411-76896430 Msa0523520:intron 20.0%
!! CAAACTTATGGTATAAAAAA+AGG + chr3_4:76896437-76896456 None:intergenic 20.0%
!!! ATTTTAATGTTTTGTACTCA+GGG + chr3_4:76896494-76896513 None:intergenic 20.0%
!!! ATAAACAAGATTATTTTTGG+TGG + chr3_4:76896982-76897001 None:intergenic 20.0%
!!! TTTAGTCCCATATATTTTAT+TGG + chr3_4:76897259-76897278 None:intergenic 20.0%
!! AAATAAAAATATCAGCAACA+AGG - chr3_4:76897294-76897313 Msa0523520:intron 20.0%
!! TTTCTTTCTAAACATAAGTT+CGG - chr3_4:76897499-76897518 Msa0523520:CDS 20.0%
!! TGTATTCATAGGAAATATAA+AGG - chr3_4:76897799-76897818 Msa0523520:intron 20.0%
!!! AGATAAATTTTGATTCAAGA+TGG - chr3_4:76897951-76897970 Msa0523520:intron 20.0%
!! AATCTCATTAACAAAAAAGA+GGG + chr3_4:76897978-76897997 None:intergenic 20.0%
!! AATTGATTTCGATTCGTTAT+TGG - chr3_4:76889296-76889315 Msa0523520:three_prime_UTR 25.0%
!! ATTGTTGCTAATTGTGATTT+TGG - chr3_4:76889631-76889650 Msa0523520:intron 25.0%
! AATAACCTAGAAATTAGAGA+TGG + chr3_4:76889865-76889884 None:intergenic 25.0%
!! CTATTTCTTTGATCTTGTAA+AGG - chr3_4:76890219-76890238 Msa0523520:intron 25.0%
! ACAGAATTACAAATAGAACT+CGG + chr3_4:76890451-76890470 None:intergenic 25.0%
! CAAATCCTGAAATTGTAAAA+AGG - chr3_4:76890532-76890551 Msa0523520:intron 25.0%
!! GTCTCTTTTGCTTATAATTT+GGG + chr3_4:76890941-76890960 None:intergenic 25.0%
! TTGGAACAATAGAATTAAGT+AGG + chr3_4:76890974-76890993 None:intergenic 25.0%
! TAAACATATGGATGATTCAT+CGG + chr3_4:76891046-76891065 None:intergenic 25.0%
!! TTTTTGCTTATAAATTGGGA+CGG - chr3_4:76891328-76891347 Msa0523520:intron 25.0%
! AACTGTTAAGAAAGAATTAG+AGG - chr3_4:76891750-76891769 Msa0523520:intron 25.0%
! AAGAAAGAATTAGAGGTTAA+TGG - chr3_4:76891757-76891776 Msa0523520:intron 25.0%
!! TATCTATATTGCTGTTGAAA+TGG - chr3_4:76891997-76892016 Msa0523520:CDS 25.0%
!! ATTATCATCGCTGTAAATTT+TGG - chr3_4:76892052-76892071 Msa0523520:intron 25.0%
! GTAATTATCTTGTTGAATTC+TGG - chr3_4:76892102-76892121 Msa0523520:intron 25.0%
!! TAAATTCTAAAAAGGGTTTG+TGG - chr3_4:76892277-76892296 Msa0523520:CDS 25.0%
! TAATTGCTGGATTTAATTCT+CGG + chr3_4:76892651-76892670 None:intergenic 25.0%
!! AAAATTTGAGTTATCGACAA+AGG + chr3_4:76892750-76892769 None:intergenic 25.0%
! AACGAAATACTTATTCAATG+GGG + chr3_4:76892810-76892829 None:intergenic 25.0%
! TATTCTCATAATATTTGCCT+TGG - chr3_4:76892848-76892867 Msa0523520:intron 25.0%
!!! TATATTTTAATGGGAACTTC+TGG + chr3_4:76893146-76893165 None:intergenic 25.0%
! TATGCAAGATATAGAATTTG+AGG + chr3_4:76893205-76893224 None:intergenic 25.0%
! ATAATTTATACCACTCGTTA+AGG + chr3_4:76893237-76893256 None:intergenic 25.0%
!! TGAAACGAATATATTTGCTA+GGG + chr3_4:76893598-76893617 None:intergenic 25.0%
! ATGAAACGAATATATTTGCT+AGG + chr3_4:76893599-76893618 None:intergenic 25.0%
!!! TAATACTTTTGGGGAATATT+TGG - chr3_4:76893765-76893784 Msa0523520:intron 25.0%
! TCTCAAAAAATGCATCATAA+AGG + chr3_4:76893894-76893913 None:intergenic 25.0%
!! AGAAGATGATTTTCTATTTC+TGG - chr3_4:76894106-76894125 Msa0523520:CDS 25.0%
!!! TGGTATTTTGATTTATTTGC+AGG - chr3_4:76894169-76894188 Msa0523520:CDS 25.0%
!!! TTTGTTTTTTGTTCCTTCAA+TGG - chr3_4:76894635-76894654 Msa0523520:CDS 25.0%
! TATATTGTATTAGCCATTGA+AGG + chr3_4:76894651-76894670 None:intergenic 25.0%
!! TCGTTAAACACATTTTTGAT+AGG - chr3_4:76894752-76894771 Msa0523520:intron 25.0%
! ATATAATTACAAACAAGACC+TGG + chr3_4:76894881-76894900 None:intergenic 25.0%
! TAAAAATCCCATAAATAGAG+GGG + chr3_4:76895100-76895119 None:intergenic 25.0%
!! TATTAATAGGCTAGTTAAGT+TGG - chr3_4:76895806-76895825 Msa0523520:intron 25.0%
!!! GTTGGTTGATATAAAGATTT+TGG - chr3_4:76895824-76895843 Msa0523520:intron 25.0%
! TAAAGATTTGATCCTAAGTA+TGG - chr3_4:76896215-76896234 Msa0523520:intron 25.0%
! TTCTATCAAAAACCATACTT+AGG + chr3_4:76896230-76896249 None:intergenic 25.0%
!!! GATTTTAATGTTTTGTACTC+AGG + chr3_4:76896495-76896514 None:intergenic 25.0%
!!! TCGTTTTTCCAAAGATTATT+GGG + chr3_4:76897012-76897031 None:intergenic 25.0%
!!! ATCGTTTTTCCAAAGATTAT+TGG + chr3_4:76897013-76897032 None:intergenic 25.0%
! TCATTGACAACTAATCTAAT+TGG - chr3_4:76897038-76897057 Msa0523520:intron 25.0%
! ATGCAAGCCAATAAAATATA+TGG - chr3_4:76897249-76897268 Msa0523520:intron 25.0%
! TGCAAGCCAATAAAATATAT+GGG - chr3_4:76897250-76897269 Msa0523520:intron 25.0%
! TGTTAAGTGAAGATAAAGAA+TGG - chr3_4:76897397-76897416 Msa0523520:intron 25.0%
! AGATAGATAGGAAAGAAAAT+GGG + chr3_4:76897561-76897580 None:intergenic 25.0%
!!! ACCAATAATATTTTAGAGTG+GGG + chr3_4:76897659-76897678 None:intergenic 25.0%
!!! CACCAATAATATTTTAGAGT+GGG + chr3_4:76897660-76897679 None:intergenic 25.0%
!!! ACACCAATAATATTTTAGAG+TGG + chr3_4:76897661-76897680 None:intergenic 25.0%
! ATCTCATTAACAAAAAAGAG+GGG + chr3_4:76897977-76897996 None:intergenic 25.0%
! CAATCTCATTAACAAAAAAG+AGG + chr3_4:76897979-76897998 None:intergenic 25.0%
!!! CTCTTTTTTGTTAATGAGAT+TGG - chr3_4:76897977-76897996 Msa0523520:intron 25.0%
! TAATGAGATTGGATTTAATC+AGG - chr3_4:76897988-76898007 Msa0523520:intron 25.0%
! AATTACAAAACTATTCGGTT+GGG - chr3_4:76898034-76898053 Msa0523520:intron 25.0%
! AAGTGTATTCCAATAGTTAT+AGG + chr3_4:76898133-76898152 None:intergenic 25.0%
! AAAAATGACGTATAATCATG+AGG + chr3_4:76898156-76898175 None:intergenic 25.0%
AGAGAATAACAAGAAGAAGA+AGG + chr3_4:76889005-76889024 Msa0523510:intron 30.0%
!! TTCTTGTTATTCTCTTTCTC+TGG - chr3_4:76889010-76889029 Msa0523520:three_prime_UTR 30.0%
!! TCTTGTTATTCTCTTTCTCT+GGG - chr3_4:76889011-76889030 Msa0523520:three_prime_UTR 30.0%
AATACTACAGAAACGAGAAT+TGG + chr3_4:76889251-76889270 None:intergenic 30.0%
!!! GTGTATAGATCTTTTAGCTT+TGG - chr3_4:76889587-76889606 Msa0523520:intron 30.0%
! AGGTTTTTATCTTCAGCTAA+AGG - chr3_4:76889765-76889784 Msa0523520:intron 30.0%
CAGCATCAAAATTCAAATTC+TGG + chr3_4:76889831-76889850 None:intergenic 30.0%
! TTTTGCCATCTCTAATTTCT+AGG - chr3_4:76889857-76889876 Msa0523520:intron 30.0%
TAAATCTTCGTGCTTATTTG+TGG - chr3_4:76889932-76889951 Msa0523520:intron 30.0%
! CTTTTCCAGTCTAAAGATAT+GGG - chr3_4:76890050-76890069 Msa0523520:intron 30.0%
TTAATCCCATATCTTTAGAC+TGG + chr3_4:76890058-76890077 None:intergenic 30.0%
AGTCTAAAGATATGGGATTA+AGG - chr3_4:76890057-76890076 Msa0523520:intron 30.0%
AATGGTGTATCTGATGATAA+AGG - chr3_4:76890082-76890101 Msa0523520:intron 30.0%
ATCCTGAAATTGTAAAAAGG+TGG - chr3_4:76890535-76890554 Msa0523520:intron 30.0%
! GGTCTCTTTTGCTTATAATT+TGG + chr3_4:76890942-76890961 None:intergenic 30.0%
GAATTAAGTAGGTCAAAAGT+GGG + chr3_4:76890963-76890982 None:intergenic 30.0%
AGAATTAAGTAGGTCAAAAG+TGG + chr3_4:76890964-76890983 None:intergenic 30.0%
TAACACTACATATGCTTCTA+TGG - chr3_4:76891152-76891171 Msa0523520:intron 30.0%
GAAGCATAATTATACCTCTA+CGG + chr3_4:76891185-76891204 None:intergenic 30.0%
ATCTTAAAGAAGGGTAGTTT+AGG - chr3_4:76891222-76891241 Msa0523520:intron 30.0%
! AGGAAGCCTAGTTATATTTT+TGG - chr3_4:76891242-76891261 Msa0523520:intron 30.0%
!!! TTGTATCATGCTGACTTTTA+TGG - chr3_4:76891366-76891385 Msa0523520:intron 30.0%
TGTCATTGCATTAAGAATGT+GGG + chr3_4:76891548-76891567 None:intergenic 30.0%
TTGTCATTGCATTAAGAATG+TGG + chr3_4:76891549-76891568 None:intergenic 30.0%
! TCAACCATCTTTTCTACAAT+GGG + chr3_4:76891598-76891617 None:intergenic 30.0%
! TTCAACCATCTTTTCTACAA+TGG + chr3_4:76891599-76891618 None:intergenic 30.0%
TTCCTCTACATCTAACAATT+AGG + chr3_4:76891709-76891728 None:intergenic 30.0%
TAATTGTTAGATGTAGAGGA+AGG - chr3_4:76891708-76891727 Msa0523520:intron 30.0%
AGAATTAGAGGTTAATGGTT+TGG - chr3_4:76891762-76891781 Msa0523520:intron 30.0%
CAACTCCAGTAATTTATAAG+TGG - chr3_4:76891950-76891969 Msa0523520:CDS 30.0%
AGGAACCACTTATAAATTAC+TGG + chr3_4:76891958-76891977 None:intergenic 30.0%
! TTATAAGTGGTTCCTTTTCA+AGG - chr3_4:76891963-76891982 Msa0523520:CDS 30.0%
! AAAAAAAAAGGCCTTTGAGA+AGG + chr3_4:76892220-76892239 None:intergenic 30.0%
TAAAAAGGGTTTGTGGTATT+TGG - chr3_4:76892284-76892303 Msa0523520:CDS 30.0%
TCTCAAGAAAATCATAGAAG+GGG + chr3_4:76892552-76892571 None:intergenic 30.0%
CTCTCAAGAAAATCATAGAA+GGG + chr3_4:76892553-76892572 None:intergenic 30.0%
ACTCTCAAGAAAATCATAGA+AGG + chr3_4:76892554-76892573 None:intergenic 30.0%
! TAGCAGAAGTGATTTTTAAC+AGG - chr3_4:76892769-76892788 Msa0523520:CDS 30.0%
!! ATTACTACACTTTTGAAGAC+AGG - chr3_4:76893015-76893034 Msa0523520:CDS 30.0%
!!! AATCTTTTTTCCTTAACGAG+TGG - chr3_4:76893224-76893243 Msa0523520:intron 30.0%
ATTTCCTGAGTAACATTCTT+AGG - chr3_4:76893289-76893308 Msa0523520:intron 30.0%
TTTCCTGAGTAACATTCTTA+GGG - chr3_4:76893290-76893309 Msa0523520:intron 30.0%
! CAGTTTGTTCATATTTCTTC+TGG - chr3_4:76893485-76893504 Msa0523520:intron 30.0%
CAACTTGGTTAACAACAAAA+AGG + chr3_4:76893517-76893536 None:intergenic 30.0%
!!! GTTACTAGTTTTTCAGACAA+AGG + chr3_4:76894033-76894052 None:intergenic 30.0%
TCCAAGTGTGTTTAGATAAA+GGG + chr3_4:76894210-76894229 None:intergenic 30.0%
CATGTGTTTGATATGATTAC+AGG - chr3_4:76894380-76894399 Msa0523520:intron 30.0%
!! AAACTTTGGGAACCTTTTTA+AGG - chr3_4:76894578-76894597 Msa0523520:CDS 30.0%
CAAGTGTATGAACCTTAAAA+AGG + chr3_4:76894593-76894612 None:intergenic 30.0%
ACATGTTCTAATAATTGCTC+TGG + chr3_4:76894814-76894833 None:intergenic 30.0%
TCATAAAACAATCCAAATCC+AGG - chr3_4:76894860-76894879 Msa0523520:CDS 30.0%
TTAGAAAATTTCCCAAGTGT+TGG + chr3_4:76895044-76895063 None:intergenic 30.0%
TGTAAAATCTCGGCATAAAT+TGG - chr3_4:76895158-76895177 Msa0523520:intron 30.0%
TATCTAATTTCAGGAATGCA+TGG - chr3_4:76895292-76895311 Msa0523520:intron 30.0%
ATCTAATTTCAGGAATGCAT+GGG - chr3_4:76895293-76895312 Msa0523520:intron 30.0%
ATGTCTGTGTTTGTGTAAAA+TGG - chr3_4:76895492-76895511 Msa0523520:intron 30.0%
AATATGGTTTATCATGGTGA+GGG + chr3_4:76895563-76895582 None:intergenic 30.0%
AAATATGGTTTATCATGGTG+AGG + chr3_4:76895564-76895583 None:intergenic 30.0%
TATGCAGATAAATACTGACA+GGG - chr3_4:76896083-76896102 Msa0523520:intron 30.0%
! TTTAGACCTCTAAAGATGTT+TGG + chr3_4:76896113-76896132 None:intergenic 30.0%
! TGGTTTTTGATAGAACACTA+TGG - chr3_4:76896235-76896254 Msa0523520:intron 30.0%
AAAGATTTGATCCTAAGTCA+AGG - chr3_4:76896321-76896340 Msa0523520:intron 30.0%
AAATAGAATAAGACGATCAC+AGG + chr3_4:76896536-76896555 None:intergenic 30.0%
! TCCATTACAGATTAGTTGTT+TGG - chr3_4:76896607-76896626 Msa0523520:intron 30.0%
TCCAAACAACTAATCTGTAA+TGG + chr3_4:76896611-76896630 None:intergenic 30.0%
CAATATGATATCCAAGAGAT+TGG - chr3_4:76896685-76896704 Msa0523520:CDS 30.0%
! GTTCATTTTATTGTAGTTCC+CGG + chr3_4:76896713-76896732 None:intergenic 30.0%
CAATAAAATGAACGCAAGAA+AGG - chr3_4:76896720-76896739 Msa0523520:intron 30.0%
CATGAAGAAATCTGACAATT+AGG + chr3_4:76896833-76896852 None:intergenic 30.0%
CTAATTGTCAGATTTCTTCA+TGG - chr3_4:76896831-76896850 Msa0523520:CDS 30.0%
AATACCCTAATCTTTCTTTG+GGG + chr3_4:76896866-76896885 None:intergenic 30.0%
CAATACCCTAATCTTTCTTT+GGG + chr3_4:76896867-76896886 None:intergenic 30.0%
ACAATACCCTAATCTTTCTT+TGG + chr3_4:76896868-76896887 None:intergenic 30.0%
!! AAAGAAAGATTAGGGTATTG+TGG - chr3_4:76896867-76896886 Msa0523520:CDS 30.0%
! CGTTTTTCCAAAGATTATTG+GGG + chr3_4:76897011-76897030 None:intergenic 30.0%
! AATTCCTCATCATTCCATTT+TGG - chr3_4:76897076-76897095 Msa0523520:intron 30.0%
AAATCCAAAATGGAATGATG+AGG + chr3_4:76897083-76897102 None:intergenic 30.0%
TTGGGTTTCAAAATCCAAAA+TGG + chr3_4:76897093-76897112 None:intergenic 30.0%
CATCTCAGAAAAGAAAACTA+AGG - chr3_4:76897216-76897235 Msa0523520:CDS 30.0%
ATGGGACTAAAAAAACATCA+AGG - chr3_4:76897268-76897287 Msa0523520:intron 30.0%
GAGATAGATAGGAAAGAAAA+TGG + chr3_4:76897562-76897581 None:intergenic 30.0%
! AGAGGAGACAATATAAGTTT+TGG - chr3_4:76897617-76897636 Msa0523520:intron 30.0%
!! TCCCCACTCTAAAATATTAT+TGG - chr3_4:76897655-76897674 Msa0523520:intron 30.0%
CTTTCAGTTATTCACTGTTA+TGG - chr3_4:76897684-76897703 Msa0523520:intron 30.0%
AATTTCATTGCAACATCCTT+TGG + chr3_4:76897857-76897876 None:intergenic 30.0%
GAATTACAAAACTATTCGGT+TGG - chr3_4:76898033-76898052 Msa0523520:intron 30.0%
! GATACTGGAAGTATAATGTT+GGG - chr3_4:76898107-76898126 Msa0523520:CDS 30.0%
AAAAATGACGACACAAACAT+TGG + chr3_4:76898220-76898239 None:intergenic 30.0%
!! TTGATAGTGTATCTGATCGA+AGG - chr3_4:76889377-76889396 Msa0523520:CDS 35.0%
ACTATCAACTCATCACTAGA+AGG + chr3_4:76889569-76889588 None:intergenic 35.0%
! CTTTTCAATTCCCATGAAAG+GGG + chr3_4:76889681-76889700 None:intergenic 35.0%
! CCTTTTCAATTCCCATGAAA+GGG + chr3_4:76889682-76889701 None:intergenic 35.0%
CCTTTCATGGGAATTGAAAA+GGG - chr3_4:76889680-76889699 Msa0523520:intron 35.0%
CTTTCATGGGAATTGAAAAG+GGG - chr3_4:76889681-76889700 Msa0523520:intron 35.0%
TTTCATGGGAATTGAAAAGG+GGG - chr3_4:76889682-76889701 Msa0523520:intron 35.0%
ATGATCCACAATTAGATGCT+AGG - chr3_4:76889732-76889751 Msa0523520:intron 35.0%
AAAGAAAACTTCTGTGGCTT+CGG + chr3_4:76890018-76890037 None:intergenic 35.0%
! GCTTTTCCAGTCTAAAGATA+TGG - chr3_4:76890049-76890068 Msa0523520:intron 35.0%
AGATATGGGATTAAGGAGAA+TGG - chr3_4:76890064-76890083 Msa0523520:intron 35.0%
AATAAGCATGTCGCATACAT+GGG + chr3_4:76890492-76890511 None:intergenic 35.0%
AAATAAGCATGTCGCATACA+TGG + chr3_4:76890493-76890512 None:intergenic 35.0%
TCAGGATTTGTCTGTAAAGA+GGG + chr3_4:76890522-76890541 None:intergenic 35.0%
TTCAGGATTTGTCTGTAAAG+AGG + chr3_4:76890523-76890542 None:intergenic 35.0%
! CTCCACCTTTTTACAATTTC+AGG + chr3_4:76890540-76890559 None:intergenic 35.0%
! TTTTGTACAGTTTCATGCAC+TGG - chr3_4:76890596-76890615 Msa0523520:intron 35.0%
TTTGTACAGTTTCATGCACT+GGG - chr3_4:76890597-76890616 Msa0523520:intron 35.0%
TTCTTATAAATTGGGACGGA+GGG + chr3_4:76890902-76890921 None:intergenic 35.0%
TTTCTTATAAATTGGGACGG+AGG + chr3_4:76890903-76890922 None:intergenic 35.0%
!!! AAATTGCATGGGGGTATTTT+TGG + chr3_4:76890993-76891012 None:intergenic 35.0%
TCGGCAAATGTATAAACATG+TGG + chr3_4:76891027-76891046 None:intergenic 35.0%
TCTATGGAATTAAACCGTAG+AGG - chr3_4:76891168-76891187 Msa0523520:intron 35.0%
AGATGGTTGAATCTCGATTT+AGG - chr3_4:76891608-76891627 Msa0523520:intron 35.0%
AGCCTAATTGTTAGATGTAG+AGG - chr3_4:76891704-76891723 Msa0523520:intron 35.0%
GGTTTGGATATAGACATACA+TGG - chr3_4:76891778-76891797 Msa0523520:intron 35.0%
ATCATAAAACATGTCCCACT+AGG + chr3_4:76891852-76891871 None:intergenic 35.0%
TGATAATCAATGTAGGTCCT+AGG + chr3_4:76892039-76892058 None:intergenic 35.0%
ACAGCGATGATAATCAATGT+AGG + chr3_4:76892046-76892065 None:intergenic 35.0%
TCAGGAAATAATACACAGTC+AGG - chr3_4:76892520-76892539 Msa0523520:CDS 35.0%
CAGGAAATAATACACAGTCA+GGG - chr3_4:76892521-76892540 Msa0523520:CDS 35.0%
AGGAAATAATACACAGTCAG+GGG - chr3_4:76892522-76892541 Msa0523520:CDS 35.0%
ACAGCAGCAAATCTTAAAAC+TGG + chr3_4:76892706-76892725 None:intergenic 35.0%
ACAAAGCTCAAGTTTAACCA+AGG + chr3_4:76892868-76892887 None:intergenic 35.0%
CACTAACTGCAACATTGATA+TGG - chr3_4:76892948-76892967 Msa0523520:CDS 35.0%
AAGTGTAGTAATAGCAAGTG+TGG + chr3_4:76893007-76893026 None:intergenic 35.0%
AGTAACATTCTTAGGGAAGA+AGG - chr3_4:76893297-76893316 Msa0523520:intron 35.0%
TGTAGTATCTATGGTTCAAG+GGG + chr3_4:76893542-76893561 None:intergenic 35.0%
GTGTAGTATCTATGGTTCAA+GGG + chr3_4:76893543-76893562 None:intergenic 35.0%
AGTGTAGTATCTATGGTTCA+AGG + chr3_4:76893544-76893563 None:intergenic 35.0%
CTTAGCAAAACAAATATGCG+CGG + chr3_4:76893829-76893848 None:intergenic 35.0%
!! TCTTTTTGACAGTGATGATG+AGG - chr3_4:76893855-76893874 Msa0523520:CDS 35.0%
AGAAAATCATCTTCTTTCGG+CGG + chr3_4:76894101-76894120 None:intergenic 35.0%
ACCCTTTATCTAAACACACT+TGG - chr3_4:76894206-76894225 Msa0523520:CDS 35.0%
CTCCAAGTGTGTTTAGATAA+AGG + chr3_4:76894211-76894230 None:intergenic 35.0%
CTTTATCTAAACACACTTGG+AGG - chr3_4:76894209-76894228 Msa0523520:CDS 35.0%
TGAGACTGATAAAGCTGTAA+AGG - chr3_4:76894247-76894266 Msa0523520:CDS 35.0%
! AAAGTTTGCAAACTCTGGAA+TGG + chr3_4:76894565-76894584 None:intergenic 35.0%
ATTCCAGAGTTTGCAAACTT+TGG - chr3_4:76894564-76894583 Msa0523520:CDS 35.0%
TTCCAGAGTTTGCAAACTTT+GGG - chr3_4:76894565-76894584 Msa0523520:CDS 35.0%
TTACAAACAAGACCTGGATT+TGG + chr3_4:76894875-76894894 None:intergenic 35.0%
CAATTACGATAACCTGAACA+AGG + chr3_4:76894908-76894927 None:intergenic 35.0%
! TGTTCAGGTTATCGTAATTG+TGG - chr3_4:76894908-76894927 Msa0523520:CDS 35.0%
! TCTGAAGTTTATTGTTCGAG+AGG - chr3_4:76895067-76895086 Msa0523520:intron 35.0%
! TCGGCATAAATTGGATTTTC+AGG - chr3_4:76895167-76895186 Msa0523520:intron 35.0%
AGCAGATTACACATTGAAAG+TGG - chr3_4:76895266-76895285 Msa0523520:intron 35.0%
GCAGATTACACATTGAAAGT+GGG - chr3_4:76895267-76895286 Msa0523520:intron 35.0%
CAGATTACACATTGAAAGTG+GGG - chr3_4:76895268-76895287 Msa0523520:intron 35.0%
AGATTACACATTGAAAGTGG+GGG - chr3_4:76895269-76895288 Msa0523520:intron 35.0%
GATGACAGTATTTACAGCTT+CGG + chr3_4:76895382-76895401 None:intergenic 35.0%
AATACTGTCATCAACCTTCT+TGG - chr3_4:76895390-76895409 Msa0523520:intron 35.0%
ACGAAGAGTTCAAAAGAAAC+AGG + chr3_4:76895449-76895468 None:intergenic 35.0%
GTTTGTGTAAAATGGTTGTG+AGG - chr3_4:76895500-76895519 Msa0523520:intron 35.0%
TTACTGTAGCATAGTTACTG+TGG - chr3_4:76895627-76895646 Msa0523520:intron 35.0%
ATGAAAACATACACCCAAAG+TGG - chr3_4:76895744-76895763 Msa0523520:intron 35.0%
TGAAAACATACACCCAAAGT+GGG - chr3_4:76895745-76895764 Msa0523520:intron 35.0%
TGTTTGAGAAAACCCACTTT+GGG + chr3_4:76895760-76895779 None:intergenic 35.0%
ATGTTTGAGAAAACCCACTT+TGG + chr3_4:76895761-76895780 None:intergenic 35.0%
! AGAGTGTTTAGTTCAACAGA+GGG - chr3_4:76895848-76895867 Msa0523520:intron 35.0%
GATATAACCCTCTCTTTGTT+TGG - chr3_4:76895877-76895896 Msa0523520:intron 35.0%
TGACAAACCAAACAAAGAGA+GGG + chr3_4:76895887-76895906 None:intergenic 35.0%
GTATGCAGATAAATACTGAC+AGG - chr3_4:76896082-76896101 Msa0523520:intron 35.0%
!!! GGTTTTAGACTGCAAACTTA+TGG + chr3_4:76896449-76896468 None:intergenic 35.0%
AAGTCAGCAAGTTCAAAAGA+TGG - chr3_4:76896565-76896584 Msa0523520:intron 35.0%
! TTTGAGACCCCAATAATCTT+TGG - chr3_4:76897001-76897020 Msa0523520:intron 35.0%
GAGGAATTGCTTCAACTTAA+TGG + chr3_4:76897064-76897083 None:intergenic 35.0%
AAACTGGTTGCAGAATGTAT+AGG + chr3_4:76897131-76897150 None:intergenic 35.0%
TATACATTCTGCAACCAGTT+TGG - chr3_4:76897130-76897149 Msa0523520:intron 35.0%
GGTAAATGAGTGCAGTATTT+AGG - chr3_4:76897151-76897170 Msa0523520:CDS 35.0%
! TGAGTGCAGTATTTAGGATT+AGG - chr3_4:76897157-76897176 Msa0523520:CDS 35.0%
!! TTTTGTCACTTGGATTGTTC+TGG + chr3_4:76897192-76897211 None:intergenic 35.0%
! GAGATGTTCATTTTGTCACT+TGG + chr3_4:76897202-76897221 None:intergenic 35.0%
ATTTGTGAAGATGCAAGAAG+AGG - chr3_4:76897428-76897447 Msa0523520:intron 35.0%
TACAGTAGGAAATTGTGTCA+TGG - chr3_4:76897461-76897480 Msa0523520:intron 35.0%
ATGTTGGAGAAGAGATAGAT+AGG + chr3_4:76897573-76897592 None:intergenic 35.0%
ATCTATCTCTTCTCCAACAT+TGG - chr3_4:76897573-76897592 Msa0523520:intron 35.0%
CATGTGTGTGATCTTGAATT+GGG + chr3_4:76897767-76897786 None:intergenic 35.0%
ACATGTGTGTGATCTTGAAT+TGG + chr3_4:76897768-76897787 None:intergenic 35.0%
!! ATCACACACATGTTTGTTGT+CGG - chr3_4:76897775-76897794 Msa0523520:intron 35.0%
!! GAAATATAAAGGTGCTTGTG+CGG - chr3_4:76897810-76897829 Msa0523520:intron 35.0%
! CGATACTGGAAGTATAATGT+TGG - chr3_4:76898106-76898125 Msa0523520:CDS 35.0%
AATGTTGGGCCTATAACTAT+TGG - chr3_4:76898121-76898140 Msa0523520:CDS 35.0%
AATGAATGCACAACTCACTC+GGG + chr3_4:76889055-76889074 Msa0523510:intron 40.0%
GAATGAATGCACAACTCACT+CGG + chr3_4:76889056-76889075 Msa0523510:intron 40.0%
TCATCATCTTTCTTCACGAG+TGG + chr3_4:76889123-76889142 Msa0523510:intron 40.0%
TTGGAAACGAAACATGGATC+TGG + chr3_4:76889232-76889251 None:intergenic 40.0%
CGAGAATTGGAAACGAAACA+TGG + chr3_4:76889238-76889257 None:intergenic 40.0%
AGTCAGTATTCGTGCTTCAT+AGG - chr3_4:76889410-76889429 Msa0523520:CDS 40.0%
CCCTTTCATGGGAATTGAAA+AGG - chr3_4:76889679-76889698 Msa0523520:intron 40.0%
! CCCTTTTCAATTCCCATGAA+AGG + chr3_4:76889683-76889702 None:intergenic 40.0%
CATCTCCTAGCATCTAATTG+TGG + chr3_4:76889740-76889759 None:intergenic 40.0%
CTGCTATACCTACTGAATCA+GGG - chr3_4:76889891-76889910 Msa0523520:intron 40.0%
! TCAGGGAGAGACTTTTACAA+AGG - chr3_4:76889908-76889927 Msa0523520:intron 40.0%
GACAGCAAAGAAAACTTCTG+TGG + chr3_4:76890024-76890043 None:intergenic 40.0%
TGTCACAAGCTCTCTTATGA+AGG - chr3_4:76890249-76890268 Msa0523520:intron 40.0%
! TAGATGAATGCCACTGACTA+AGG + chr3_4:76890416-76890435 None:intergenic 40.0%
ATAAGCATGTCGCATACATG+GGG + chr3_4:76890491-76890510 None:intergenic 40.0%
TGTAAAAAGGTGGAGCAATG+AGG - chr3_4:76890545-76890564 Msa0523520:intron 40.0%
GTGAATTATAGTTCGCTTGC+TGG - chr3_4:76890680-76890699 Msa0523520:intron 40.0%
TTGCTTATAAATTGGGACGG+AGG - chr3_4:76891331-76891350 Msa0523520:intron 40.0%
TGCTTATAAATTGGGACGGA+GGG - chr3_4:76891332-76891351 Msa0523520:intron 40.0%
TTACTATCTCTCCATCCACT+CGG - chr3_4:76891393-76891412 Msa0523520:intron 40.0%
! CATTGATTGTGGGGTATTTC+TGG + chr3_4:76891419-76891438 None:intergenic 40.0%
CAGAAATACCCCACAATCAA+TGG - chr3_4:76891417-76891436 Msa0523520:intron 40.0%
GTTTGCAAGTCTAAGAAGTC+AGG + chr3_4:76891456-76891475 None:intergenic 40.0%
AGCACCCATTGTAGAAAAGA+TGG - chr3_4:76891591-76891610 Msa0523520:intron 40.0%
TGGTTGAATCTCGATTTAGG+TGG - chr3_4:76891611-76891630 Msa0523520:intron 40.0%
GATCGGCTACATAGATCAAA+CGG + chr3_4:76891826-76891845 None:intergenic 40.0%
ATCAACTCTCTGCCTTGAAA+AGG + chr3_4:76891978-76891997 None:intergenic 40.0%
! GCGAAGTTTTTATCTCACCT+AGG - chr3_4:76892019-76892038 Msa0523520:CDS 40.0%
TGCAGATACGACAGAATGAT+CGG - chr3_4:76892319-76892338 Msa0523520:CDS 40.0%
GACTTGTGTAACGAATCAAC+AGG + chr3_4:76892410-76892429 None:intergenic 40.0%
!! GTTGATTCGTTACACAAGTC+AGG - chr3_4:76892410-76892429 Msa0523520:intron 40.0%
TCCTTTCACGTGAATCTTGT+TGG - chr3_4:76892440-76892459 Msa0523520:CDS 40.0%
TCCAACAAGATTCACGTGAA+AGG + chr3_4:76892444-76892463 None:intergenic 40.0%
TTGTAGGTTATCTGTGAGTC+AGG - chr3_4:76892502-76892521 Msa0523520:CDS 40.0%
CAAGAAAATCATAGAAGGGG+CGG + chr3_4:76892549-76892568 None:intergenic 40.0%
ATTGAGCTCTGTAATAGCTC+TGG + chr3_4:76892617-76892636 None:intergenic 40.0%
AGAGCTATTACAGAGCTCAA+TGG - chr3_4:76892616-76892635 Msa0523520:intron 40.0%
AGCTGAAGAACAGTAATTGC+TGG + chr3_4:76892664-76892683 None:intergenic 40.0%
ACAAAGGCTTACCTTGTTCA+AGG + chr3_4:76892734-76892753 None:intergenic 40.0%
TGCAGTTAGTGACTGATGTT+GGG + chr3_4:76892939-76892958 None:intergenic 40.0%
TTGCAGTTAGTGACTGATGT+TGG + chr3_4:76892940-76892959 None:intergenic 40.0%
GACAGGAAATGAATCAAGTG+TGG - chr3_4:76893032-76893051 Msa0523520:CDS 40.0%
TCTGTATGTGTGCTGTACTA+CGG - chr3_4:76893170-76893189 Msa0523520:intron 40.0%
CTTCCCTAAGAATGTTACTC+AGG + chr3_4:76893296-76893315 None:intergenic 40.0%
AACATTCTTAGGGAAGAAGG+TGG - chr3_4:76893300-76893319 Msa0523520:intron 40.0%
!!! AGGTGGTTTTGAGTACAAGA+AGG - chr3_4:76893317-76893336 Msa0523520:intron 40.0%
TAGAGAAATCCCTGATGCAA+AGG - chr3_4:76893368-76893387 Msa0523520:intron 40.0%
! CTACGCAGGTATTTCTTTTG+CGG - chr3_4:76893448-76893467 Msa0523520:intron 40.0%
ACCATAGATACTACACTTCC+TGG - chr3_4:76893547-76893566 Msa0523520:intron 40.0%
CCATAGATACTACACTTCCT+GGG - chr3_4:76893548-76893567 Msa0523520:intron 40.0%
TACACTTCCTGGGAATTGAA+GGG - chr3_4:76893558-76893577 Msa0523520:CDS 40.0%
! TTGCTAGGGTCTGATGTTTT+TGG + chr3_4:76893584-76893603 None:intergenic 40.0%
!! TGCTGCAGTTGATGAGTTAA+AGG - chr3_4:76893688-76893707 Msa0523520:intron 40.0%
!!! CGCGCATATTTGTTTTGCTA+AGG - chr3_4:76893827-76893846 Msa0523520:CDS 40.0%
CTGTAAAGGACTTCCTGTTT+GGG - chr3_4:76894261-76894280 Msa0523520:CDS 40.0%
TTGACAAGCGGGATATCAAA+TGG + chr3_4:76894287-76894306 None:intergenic 40.0%
ATGTCAAAAGCCTCTTCTGA+AGG + chr3_4:76894408-76894427 None:intergenic 40.0%
TTTCTTCTCTGCAAGTGGTT+GGG + chr3_4:76894457-76894476 None:intergenic 40.0%
TGGTAAAAAGCCAACTGGTT+TGG - chr3_4:76894482-76894501 Msa0523520:intron 40.0%
! GGTAAAAAGCCAACTGGTTT+GGG - chr3_4:76894483-76894502 Msa0523520:intron 40.0%
ATATGCATCAGCTGTTGATG+GGG + chr3_4:76894526-76894545 None:intergenic 40.0%
GATATGCATCAGCTGTTGAT+GGG + chr3_4:76894527-76894546 None:intergenic 40.0%
TGATATGCATCAGCTGTTGA+TGG + chr3_4:76894528-76894547 None:intergenic 40.0%
TTCCCAAAGTTTGCAAACTC+TGG + chr3_4:76894570-76894589 None:intergenic 40.0%
! AGAAGCAGATGAGTTTTCAG+AGG - chr3_4:76894938-76894957 Msa0523520:intron 40.0%
TCATATGGAAGAGACTTGAG+AGG + chr3_4:76894975-76894994 None:intergenic 40.0%
TCTCTTCCATATGATTCACC+TGG - chr3_4:76894981-76895000 Msa0523520:intron 40.0%
ATCTGTCCAGGTGAATCATA+TGG + chr3_4:76894990-76895009 None:intergenic 40.0%
! TTCACCTGGACAGATTTTTG+TGG - chr3_4:76894995-76895014 Msa0523520:intron 40.0%
AATGCCACAAAAATCTGTCC+AGG + chr3_4:76895002-76895021 None:intergenic 40.0%
TACTCGTCCCCTCTATTTAT+GGG - chr3_4:76895090-76895109 Msa0523520:intron 40.0%
TGAAGATGAATACCAGCTAG+AGG - chr3_4:76895227-76895246 Msa0523520:intron 40.0%
!! AAGTGGGGGTATCTAATTTC+AGG - chr3_4:76895283-76895302 Msa0523520:intron 40.0%
AAAGAAACAGGTAACACCAC+TGG + chr3_4:76895437-76895456 None:intergenic 40.0%
! GGCATTGGGTAATTAACAAG+AGG + chr3_4:76895542-76895561 None:intergenic 40.0%
!! TTTATCATGGTGAGGGCATT+GGG + chr3_4:76895556-76895575 None:intergenic 40.0%
TGTAGCATAGTTACTGTGGT+GGG - chr3_4:76895631-76895650 Msa0523520:intron 40.0%
! CAGAGTGTTTAGTTCAACAG+AGG - chr3_4:76895847-76895866 Msa0523520:intron 40.0%
! GAGTGTTTAGTTCAACAGAG+GGG - chr3_4:76895849-76895868 Msa0523520:intron 40.0%
! TTTAGTTCAACAGAGGGGAA+GGG - chr3_4:76895854-76895873 Msa0523520:intron 40.0%
CTGACAAACCAAACAAAGAG+AGG + chr3_4:76895888-76895907 None:intergenic 40.0%
GGTATTACACTGGTAGAACA+GGG + chr3_4:76895958-76895977 None:intergenic 40.0%
TGGTATTACACTGGTAGAAC+AGG + chr3_4:76895959-76895978 None:intergenic 40.0%
TGATCAATAACAGCTGTCAG+AGG + chr3_4:76895986-76896005 None:intergenic 40.0%
! TAATGTTTTGTACTCAGGGC+CGG + chr3_4:76896490-76896509 None:intergenic 40.0%
TAAGACGATCACAGGTATGT+AGG + chr3_4:76896528-76896547 None:intergenic 40.0%
AGCAAGTTCAAAAGATGGTG+AGG - chr3_4:76896570-76896589 Msa0523520:intron 40.0%
GCAAGTTCAAAAGATGGTGA+GGG - chr3_4:76896571-76896590 Msa0523520:intron 40.0%
TAGTTGTTTGGATGTGTTGC+TGG - chr3_4:76896619-76896638 Msa0523520:intron 40.0%
GACTGATGTATTTGTCAAGC+AGG + chr3_4:76896648-76896667 None:intergenic 40.0%
GATATCCAAGAGATTGGATC+CGG - chr3_4:76896691-76896710 Msa0523520:CDS 40.0%
ATATCCAAGAGATTGGATCC+GGG - chr3_4:76896692-76896711 Msa0523520:CDS 40.0%
AATGAACGCAAGAAAGGAAC+AGG - chr3_4:76896726-76896745 Msa0523520:intron 40.0%
ATTTACTAGTGCCTGCATGT+TGG - chr3_4:76896760-76896779 Msa0523520:intron 40.0%
TTTACTAGTGCCTGCATGTT+GGG - chr3_4:76896761-76896780 Msa0523520:intron 40.0%
AATGGTTATACCCAACATGC+AGG + chr3_4:76896774-76896793 None:intergenic 40.0%
AGATTTCTTCATGGTCCAAC+AGG - chr3_4:76896840-76896859 Msa0523520:CDS 40.0%
!! TTAGGGTATTGTGGCTTACT+CGG - chr3_4:76896876-76896895 Msa0523520:CDS 40.0%
ACTGCACTCATTTACCAAAC+TGG + chr3_4:76897147-76897166 None:intergenic 40.0%
!!! TTTTAGAGTGGGGAGAGAAA+TGG + chr3_4:76897649-76897668 None:intergenic 40.0%
!! TTTTTATTTGTGGGCTGTGC+AGG - chr3_4:76897724-76897743 Msa0523520:intron 40.0%
!! TTTTATTTGTGGGCTGTGCA+GGG - chr3_4:76897725-76897744 Msa0523520:intron 40.0%
!! TCACACACATGTTTGTTGTC+GGG - chr3_4:76897776-76897795 Msa0523520:intron 40.0%
TTGTTGTCGGGTGTATTCAT+AGG - chr3_4:76897788-76897807 Msa0523520:intron 40.0%
ATCACTGACAGTTTCATCCT+CGG + chr3_4:76897891-76897910 None:intergenic 40.0%
TGATGCCATTCATGAGATTG+TGG - chr3_4:76897907-76897926 Msa0523520:intron 40.0%
ATTCATGAGATTGTGGCTAG+CGG - chr3_4:76897914-76897933 Msa0523520:intron 40.0%
TTTGTCCCTTACTGCATTCT+TGG - chr3_4:76898072-76898091 Msa0523520:intron 40.0%
GTCTACCAAGAATGCAGTAA+GGG + chr3_4:76898080-76898099 None:intergenic 40.0%
AGTCTACCAAGAATGCAGTA+AGG + chr3_4:76898081-76898100 None:intergenic 40.0%
ATCACGGTAGCTGAATCTCA+GGG + chr3_4:76889093-76889112 Msa0523510:intron 45.0%
GAGAAAAACCTTCATCGTCG+CGG + chr3_4:76889146-76889165 Msa0523510:CDS 45.0%
AGCTGAGTATTCCCCTTTCA+TGG - chr3_4:76889667-76889686 Msa0523520:intron 45.0%
GCTGAGTATTCCCCTTTCAT+GGG - chr3_4:76889668-76889687 Msa0523520:intron 45.0%
GCTGCTATACCTACTGAATC+AGG - chr3_4:76889890-76889909 Msa0523520:intron 45.0%
AAGTCTCTCCCTGATTCAGT+AGG + chr3_4:76889902-76889921 None:intergenic 45.0%
AATACCGCTCAATTTGTGCC+AGG + chr3_4:76890348-76890367 None:intergenic 45.0%
AAGGCAGCACTTGCAACAAT+TGG + chr3_4:76890397-76890416 None:intergenic 45.0%
CAGTGGCATTCATCTACTAC+AGG - chr3_4:76890420-76890439 Msa0523520:intron 45.0%
AACCAATCTTGCAGCATACC+TGG + chr3_4:76890632-76890651 None:intergenic 45.0%
! GGTATGCTGCAAGATTGGTT+TGG - chr3_4:76890632-76890651 Msa0523520:intron 45.0%
!! GTTCGCTTGCTGGCTTATAT+CGG - chr3_4:76890690-76890709 Msa0523520:intron 45.0%
ATGTTCAGCACGAGCTAATC+AGG - chr3_4:76890757-76890776 Msa0523520:intron 45.0%
! ACGGAGGGAGTACAATACAT+AGG + chr3_4:76890887-76890906 None:intergenic 45.0%
! TACCCCACAATCAATGGACT+AGG - chr3_4:76891423-76891442 Msa0523520:intron 45.0%
!! ACCCCACAATCAATGGACTA+GGG - chr3_4:76891424-76891443 Msa0523520:intron 45.0%
! ACCCCTAGTCCATTGATTGT+GGG + chr3_4:76891429-76891448 None:intergenic 45.0%
TCGATCTACTCTCCTTCCTA+TGG + chr3_4:76891675-76891694 None:intergenic 45.0%
AGGAAGGAGAGTAGATCGAA+TGG - chr3_4:76891676-76891695 Msa0523520:intron 45.0%
AAGGAGAGTAGATCGAATGG+AGG - chr3_4:76891679-76891698 Msa0523520:intron 45.0%
AGGAGAGTAGATCGAATGGA+GGG - chr3_4:76891680-76891699 Msa0523520:intron 45.0%
TAAAACATGTCCCACTAGGC+AGG + chr3_4:76891848-76891867 None:intergenic 45.0%
!! AGCTTGTTAGCAGCTTGACA+AGG - chr3_4:76892355-76892374 Msa0523520:intron 45.0%
! GCTTGTTAGCAGCTTGACAA+GGG - chr3_4:76892356-76892375 Msa0523520:intron 45.0%
CTTGTTAGCAGCTTGACAAG+GGG - chr3_4:76892357-76892376 Msa0523520:intron 45.0%
TTGTTAGCAGCTTGACAAGG+GGG - chr3_4:76892358-76892377 Msa0523520:intron 45.0%
GTAACGAATCAACAGGCACT+GGG + chr3_4:76892403-76892422 None:intergenic 45.0%
TGTAACGAATCAACAGGCAC+TGG + chr3_4:76892404-76892423 None:intergenic 45.0%
! CCATTTCTGACTTGTGACGT+AGG + chr3_4:76892579-76892598 None:intergenic 45.0%
CCTACGTCACAAGTCAGAAA+TGG - chr3_4:76892576-76892595 Msa0523520:intron 45.0%
!! GTGCGGCTTTAAAACTTTGC+AGG - chr3_4:76892900-76892919 Msa0523520:intron 45.0%
!! CGGCTTTAAAACTTTGCAGG+TGG - chr3_4:76892903-76892922 Msa0523520:intron 45.0%
ATCCCTGATGCAAAGGAAAC+AGG - chr3_4:76893375-76893394 Msa0523520:intron 45.0%
TCCCTGATGCAAAGGAAACA+GGG - chr3_4:76893376-76893395 Msa0523520:intron 45.0%
ACCCTGTTTCCTTTGCATCA+GGG + chr3_4:76893380-76893399 None:intergenic 45.0%
AACCCTGTTTCCTTTGCATC+AGG + chr3_4:76893381-76893400 None:intergenic 45.0%
GTTCACTTATCTGTCTACGC+AGG - chr3_4:76893434-76893453 Msa0523520:intron 45.0%
ATGGTTCAAGGGGAACAACT+TGG + chr3_4:76893532-76893551 None:intergenic 45.0%
! CCCAGGAAGTGTAGTATCTA+TGG + chr3_4:76893551-76893570 None:intergenic 45.0%
CTACACTTCCTGGGAATTGA+AGG - chr3_4:76893557-76893576 Msa0523520:CDS 45.0%
!! TTTTTGGCCCTTCAATTCCC+AGG + chr3_4:76893568-76893587 None:intergenic 45.0%
AATCATCTTCTTTCGGCGGA+GGG + chr3_4:76894097-76894116 None:intergenic 45.0%
AAATCATCTTCTTTCGGCGG+AGG + chr3_4:76894098-76894117 None:intergenic 45.0%
CTAAACACACTTGGAGGTGA+TGG - chr3_4:76894215-76894234 Msa0523520:CDS 45.0%
GCTGTAAAGGACTTCCTGTT+TGG - chr3_4:76894260-76894279 Msa0523520:CDS 45.0%
GGATATCAAATGGCCCAAAC+AGG + chr3_4:76894277-76894296 None:intergenic 45.0%
TGATATCCCGCTTGTCAATC+TGG - chr3_4:76894289-76894308 Msa0523520:CDS 45.0%
TAGTCTCCAGATTGACAAGC+GGG + chr3_4:76894298-76894317 None:intergenic 45.0%
CTAGTCTCCAGATTGACAAG+CGG + chr3_4:76894299-76894318 None:intergenic 45.0%
ATTACAGGAGCCTTCAGAAG+AGG - chr3_4:76894395-76894414 Msa0523520:intron 45.0%
!! TGACATTGATTCTGTGCCCA+AGG - chr3_4:76894422-76894441 Msa0523520:intron 45.0%
! GGTTGGGATTTGACTTCCTT+GGG + chr3_4:76894441-76894460 None:intergenic 45.0%
! TGGTTGGGATTTGACTTCCT+TGG + chr3_4:76894442-76894461 None:intergenic 45.0%
CTTTCTTCTCTGCAAGTGGT+TGG + chr3_4:76894458-76894477 None:intergenic 45.0%
!!! ACCAGTTGGCTTTTTACCAG+AGG + chr3_4:76894481-76894500 None:intergenic 45.0%
! TATGCATCAGCTGTTGATGG+GGG + chr3_4:76894525-76894544 None:intergenic 45.0%
!! GTTTGCAAACTCTGGAATGG+AGG + chr3_4:76894562-76894581 None:intergenic 45.0%
TCGTGTTTGTGCAGTTGTAC+TGG + chr3_4:76894789-76894808 None:intergenic 45.0%
GTACTCGTCCCCTCTATTTA+TGG - chr3_4:76895089-76895108 Msa0523520:intron 45.0%
TGAATACCAGCTAGAGGATC+TGG - chr3_4:76895233-76895252 Msa0523520:intron 45.0%
! AGGAATGCATGGGAAAGCAT+GGG - chr3_4:76895303-76895322 Msa0523520:intron 45.0%
! GTTTATCATGGTGAGGGCAT+TGG + chr3_4:76895557-76895576 None:intergenic 45.0%
CTGTAGCATAGTTACTGTGG+TGG - chr3_4:76895630-76895649 Msa0523520:intron 45.0%
ACGAGTCTGTGATACTAACG+TGG + chr3_4:76895706-76895725 None:intergenic 45.0%
! CACAGACTCGTTTTCGATGA+AGG - chr3_4:76895715-76895734 Msa0523520:intron 45.0%
! GTTTAGTTCAACAGAGGGGA+AGG - chr3_4:76895853-76895872 Msa0523520:intron 45.0%
TTAGTTCAACAGAGGGGAAG+GGG - chr3_4:76895855-76895874 Msa0523520:intron 45.0%
AGAGGCTCTTGGTATTACAC+TGG + chr3_4:76895968-76895987 None:intergenic 45.0%
CAGATAAATACTGACAGGGC+CGG - chr3_4:76896087-76896106 Msa0523520:intron 45.0%
! GACCTCTAAAGATGTTTGGC+CGG + chr3_4:76896109-76896128 None:intergenic 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + chr3_4:76896284-76896303 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + chr3_4:76896285-76896304 None:intergenic 45.0%
! AAGGCTTGGTTGTTGGTTGT+TGG - chr3_4:76896297-76896316 Msa0523520:intron 45.0%
TTCTCCAGCTCAGTTGGTTA+GGG + chr3_4:76896362-76896381 None:intergenic 45.0%
TTTCTCCAGCTCAGTTGGTT+AGG + chr3_4:76896363-76896382 None:intergenic 45.0%
ACATGTTTCTCCAGCTCAGT+TGG + chr3_4:76896368-76896387 None:intergenic 45.0%
!! AATCTTTCTTTGGGGCCTGT+TGG + chr3_4:76896858-76896877 None:intergenic 45.0%
ACAGGCCCCAAAGAAAGATT+AGG - chr3_4:76896858-76896877 Msa0523520:CDS 45.0%
CAGGCCCCAAAGAAAGATTA+GGG - chr3_4:76896859-76896878 Msa0523520:CDS 45.0%
!! TAGGGTATTGTGGCTTACTC+GGG - chr3_4:76896877-76896896 Msa0523520:CDS 45.0%
CTTACTCGGGCAATTTCGTA+TGG - chr3_4:76896890-76896909 Msa0523520:CDS 45.0%
TTGCAGAATGTATAGGCTGG+GGG + chr3_4:76897124-76897143 None:intergenic 45.0%
GTTGCAGAATGTATAGGCTG+GGG + chr3_4:76897125-76897144 None:intergenic 45.0%
GGTTGCAGAATGTATAGGCT+GGG + chr3_4:76897126-76897145 None:intergenic 45.0%
TGGTTGCAGAATGTATAGGC+TGG + chr3_4:76897127-76897146 None:intergenic 45.0%
! GTGTCATGGAGCACAAGTTT+TGG - chr3_4:76897475-76897494 Msa0523520:intron 45.0%
TCTCTTCTCCAACATTGGAG+AGG - chr3_4:76897578-76897597 Msa0523520:intron 45.0%
TGAATTGGGTGGAACAACCT+CGG + chr3_4:76897753-76897772 None:intergenic 45.0%
GTGTGTGATCTTGAATTGGG+TGG + chr3_4:76897764-76897783 None:intergenic 45.0%
! CGGTTGTCTTTTGGACTTGA+CGG - chr3_4:76897830-76897849 Msa0523520:intron 45.0%
! TTTTGGACTTGACGGTCCAA+AGG - chr3_4:76897838-76897857 Msa0523520:intron 45.0%
GAAATTGACTGTCAGATCCG+AGG - chr3_4:76897871-76897890 Msa0523520:intron 45.0%
GCTAGCCACAATCTCATGAA+TGG + chr3_4:76897915-76897934 None:intergenic 45.0%
! TGGCTAGCGGATAATCTATC+AGG - chr3_4:76897927-76897946 Msa0523520:intron 45.0%
TGGTAGACTAGCAACGATAC+TGG - chr3_4:76898092-76898111 Msa0523520:intron 45.0%
GACGACACAAACATTGGTCA+AGG + chr3_4:76898214-76898233 None:intergenic 45.0%
!!! TAATTAGTTTTAATAAAATA+TGG + chr3_4:76895579-76895598 None:intergenic 5.0%
!! AATATTAAGAAAATATTAAT+AGG - chr3_4:76895793-76895812 Msa0523520:intron 5.0%
!!! TGTTTATTTTTTATTTTAAA+AGG + chr3_4:76896154-76896173 None:intergenic 5.0%
CATCACGGTAGCTGAATCTC+AGG + chr3_4:76889094-76889113 Msa0523510:intron 50.0%
CTGAGATTCAGCTACCGTGA+TGG - chr3_4:76889092-76889111 Msa0523520:three_prime_UTR 50.0%
! ATCTGATCGAAGGCGTGTGT+CGG - chr3_4:76889387-76889406 Msa0523520:CDS 50.0%
CATAGGCTCTGTCACGATTG+CGG - chr3_4:76889427-76889446 Msa0523520:CDS 50.0%
CATGGGAATTGAAAAGGGGG+CGG - chr3_4:76889685-76889704 Msa0523520:intron 50.0%
AGATGCTAGGAGATGCTCAC+AGG - chr3_4:76889745-76889764 Msa0523520:intron 50.0%
GATACGACACAGCACTCGAA+TGG + chr3_4:76890311-76890330 None:intergenic 50.0%
GTGCTGTGTCGTATCACAGA+CGG - chr3_4:76890316-76890335 Msa0523520:intron 50.0%
AAGGTGGAGCAATGAGGTTC+AGG - chr3_4:76890551-76890570 Msa0523520:intron 50.0%
CACCAGGTATGCTGCAAGAT+TGG - chr3_4:76890627-76890646 Msa0523520:intron 50.0%
AAATTGGGACGGAGGGAGTA+TGG - chr3_4:76891339-76891358 Msa0523520:intron 50.0%
! CCCCTAGTCCATTGATTGTG+GGG + chr3_4:76891428-76891447 None:intergenic 50.0%
!! CCCCACAATCAATGGACTAG+GGG - chr3_4:76891425-76891444 Msa0523520:intron 50.0%
! CACCCCTAGTCCATTGATTG+TGG + chr3_4:76891430-76891449 None:intergenic 50.0%
TTAGGTGGTTTGAGCATGCG+TGG - chr3_4:76891626-76891645 Msa0523520:intron 50.0%
CTATGGAATCGACACTCGAC+AGG + chr3_4:76891658-76891677 None:intergenic 50.0%
!! CTGTCGAGTGTCGATTCCAT+AGG - chr3_4:76891656-76891675 Msa0523520:intron 50.0%
!! CGAGTGTCGATTCCATAGGA+AGG - chr3_4:76891660-76891679 Msa0523520:intron 50.0%
! CAACCAAGCCTTATCCCACT+AGG + chr3_4:76891915-76891934 None:intergenic 50.0%
TGGTCTGAGCTGAACCATGA+TGG - chr3_4:76892122-76892141 Msa0523520:intron 50.0%
! AGGCGCAATCGTGCATTTTG+CGG + chr3_4:76892200-76892219 None:intergenic 50.0%
TGTTAGCAGCTTGACAAGGG+GGG - chr3_4:76892359-76892378 Msa0523520:intron 50.0%
!! ATCAACAGGCACTGGGCTAA+AGG + chr3_4:76892396-76892415 None:intergenic 50.0%
TGCTGTTCGCACCTTGAACA+AGG - chr3_4:76892720-76892739 Msa0523520:CDS 50.0%
CAATGGGGAAGTTGCTTGAG+AGG + chr3_4:76892795-76892814 None:intergenic 50.0%
GTGTGGCAATGCTTCTGTTC+TGG + chr3_4:76892990-76893009 None:intergenic 50.0%
GTGAGCACACTGGCAAAGTT+TGG - chr3_4:76893665-76893684 Msa0523520:CDS 50.0%
GAGGCTTTCTTCTCTGCAAG+TGG + chr3_4:76894462-76894481 None:intergenic 50.0%
CTTGCAGAGAAGAAAGCCTC+TGG - chr3_4:76894462-76894481 Msa0523520:intron 50.0%
GCCTCTGGTAAAAAGCCAAC+TGG - chr3_4:76894477-76894496 Msa0523520:intron 50.0%
TGGAAGAGACTTGAGAGGCT+TGG + chr3_4:76894970-76894989 None:intergenic 50.0%
TGTGGCATTTGAGAAGCCTG+AGG - chr3_4:76895013-76895032 Msa0523520:intron 50.0%
GTGGCATTTGAGAAGCCTGA+GGG - chr3_4:76895014-76895033 Msa0523520:intron 50.0%
ATCATCTTCAGCCTCACCAG+TGG + chr3_4:76895202-76895221 None:intergenic 50.0%
ACTGGTGAGGCTGAAGATGA+TGG - chr3_4:76895201-76895220 Msa0523520:intron 50.0%
CAGGAATGCATGGGAAAGCA+TGG - chr3_4:76895302-76895321 Msa0523520:intron 50.0%
CATCCACTCGCTCACAATCA+GGG + chr3_4:76895329-76895348 None:intergenic 50.0%
TCATCCACTCGCTCACAATC+AGG + chr3_4:76895330-76895349 None:intergenic 50.0%
TGTGAGCGAGTGGATGAGTA+TGG - chr3_4:76895333-76895352 Msa0523520:intron 50.0%
CGAGTGGATGAGTATGGTCT+TGG - chr3_4:76895339-76895358 Msa0523520:intron 50.0%
! ATGAGTATGGTCTTGGCCCA+AGG - chr3_4:76895346-76895365 Msa0523520:intron 50.0%
! TGAGTATGGTCTTGGCCCAA+GGG - chr3_4:76895347-76895366 Msa0523520:intron 50.0%
! TGTGGTGGGACAATTCTGCT+TGG - chr3_4:76895645-76895664 Msa0523520:intron 50.0%
TAACAGCTGTCAGAGGCTCT+TGG + chr3_4:76895979-76895998 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG + chr3_4:76896280-76896299 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + chr3_4:76896286-76896305 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG - chr3_4:76896283-76896302 Msa0523520:intron 50.0%
! GTGGGATAAGGCTTGGTTGT+TGG - chr3_4:76891916-76891935 Msa0523520:CDS 50.0%
ATCCTAAGTCAAGGCGTGTG+AGG - chr3_4:76896330-76896349 Msa0523520:intron 50.0%
! GCAGTCTAAAACCCCTAGCT+TGG - chr3_4:76896456-76896475 Msa0523520:intron 50.0%
ACGATCACAGGTATGTAGGC+TGG + chr3_4:76896524-76896543 None:intergenic 50.0%
AGTTCCCGGATCCAATCTCT+TGG + chr3_4:76896699-76896718 None:intergenic 50.0%
GAACGCAAGAAAGGAACAGG+AGG - chr3_4:76896729-76896748 Msa0523520:intron 50.0%
! AGCTCCAGAGAAGTTTGCTC+AGG - chr3_4:76896919-76896938 Msa0523520:CDS 50.0%
TGTGCCTGAGCAAACTTCTC+TGG + chr3_4:76896926-76896945 None:intergenic 50.0%
CTTCGTCTCCTCTCCAATGT+TGG + chr3_4:76897589-76897608 None:intergenic 50.0%
GGAGACGAAGTCAAGAGTAG+AGG - chr3_4:76897599-76897618 Msa0523520:intron 50.0%
AGAGTGGGGAGAGAAATGGA+GGG + chr3_4:76897645-76897664 None:intergenic 50.0%
TAGAGTGGGGAGAGAAATGG+AGG + chr3_4:76897646-76897665 None:intergenic 50.0%
! GTGCTTGTGCGGTTGTCTTT+TGG - chr3_4:76897821-76897840 Msa0523520:intron 50.0%
CACGAGTGGTTGAGCCATCA+CGG + chr3_4:76889109-76889128 Msa0523510:intron 55.0%
GATGATGACCGCGACGATGA+AGG - chr3_4:76889135-76889154 Msa0523520:three_prime_UTR 55.0%
TGAAAAGGGGGCGGTTCTTC+AGG - chr3_4:76889694-76889713 Msa0523520:intron 55.0%
GGCGGTTCTTCAGGAAGCAA+GGG - chr3_4:76889703-76889722 Msa0523520:intron 55.0%
GATATCTCCCTCTGCAGACG+AGG - chr3_4:76890106-76890125 Msa0523520:intron 55.0%
CAAGTCACCTCGTCTGCAGA+GGG + chr3_4:76890116-76890135 None:intergenic 55.0%
ACAAGTCACCTCGTCTGCAG+AGG + chr3_4:76890117-76890136 None:intergenic 55.0%
TATCACAGACGGAACCCTCC+TGG - chr3_4:76890327-76890346 Msa0523520:intron 55.0%
CCGCTCAATTTGTGCCAGGA+GGG + chr3_4:76890344-76890363 None:intergenic 55.0%
CCCTCCTGGCACAAATTGAG+CGG - chr3_4:76890341-76890360 Msa0523520:intron 55.0%
ACCGCTCAATTTGTGCCAGG+AGG + chr3_4:76890345-76890364 None:intergenic 55.0%
! GCAAGTGCTGCCTTAGTCAG+TGG - chr3_4:76890403-76890422 Msa0523520:intron 55.0%
!! GGTATTTCTGGCCGAGTGGA+TGG + chr3_4:76891407-76891426 None:intergenic 55.0%
ATGTAGCCGATCCTGCCTAG+TGG - chr3_4:76891834-76891853 Msa0523520:CDS 55.0%
TGTAGCCGATCCTGCCTAGT+GGG - chr3_4:76891835-76891854 Msa0523520:CDS 55.0%
CATGTCCCACTAGGCAGGAT+CGG + chr3_4:76891843-76891862 None:intergenic 55.0%
CTTATCCCACTAGGCGGGAT+CGG + chr3_4:76891906-76891925 None:intergenic 55.0%
! CAAGCCTTATCCCACTAGGC+GGG + chr3_4:76891911-76891930 None:intergenic 55.0%
! CCAAGCCTTATCCCACTAGG+CGG + chr3_4:76891912-76891931 None:intergenic 55.0%
GCACGATTGCGCCTTCTCAA+AGG - chr3_4:76892206-76892225 Msa0523520:CDS 55.0%
GAGAATGCAACAGTGAGGGC+CGG - chr3_4:76893638-76893657 Msa0523520:CDS 55.0%
TCAGCTTCAGTGAGCTCCAC+AGG + chr3_4:76894712-76894731 None:intergenic 55.0%
!! CTGAGGGAGTGCCAACACTT+GGG - chr3_4:76895030-76895049 Msa0523520:intron 55.0%
!! TTTCAGGTTGACCCGACCAC+TGG - chr3_4:76895183-76895202 Msa0523520:intron 55.0%
TCTTCAGCCTCACCAGTGGT+CGG + chr3_4:76895198-76895217 None:intergenic 55.0%
CGATCTCCAGATCCTCTAGC+TGG + chr3_4:76895242-76895261 None:intergenic 55.0%
CACAAGGCTGCAAGCCAAGA+AGG + chr3_4:76895407-76895426 None:intergenic 55.0%
!! TCTTGGCTTGCAGCCTTGTG+AGG - chr3_4:76895407-76895426 Msa0523520:intron 55.0%
! AGCCTTGTGAGGTAAGCCAG+TGG - chr3_4:76895418-76895437 Msa0523520:intron 55.0%
!! CACCACTGGCTTACCTCACA+AGG + chr3_4:76895423-76895442 None:intergenic 55.0%
GGCCGGCCAAACATCTTTAG+AGG - chr3_4:76896104-76896123 Msa0523520:intron 55.0%
ACTAAGTGGGGTCGGCTACA+TGG + chr3_4:76896272-76896291 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG - chr3_4:76896271-76896290 Msa0523520:intron 55.0%
TGTAGCCGACCCCACTTAGT+GGG - chr3_4:76896272-76896291 Msa0523520:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG - chr3_4:76896278-76896297 Msa0523520:intron 55.0%
TGCCTCACACGCCTTGACTT+AGG + chr3_4:76896335-76896354 None:intergenic 55.0%
CTCACCCTAACCAACTGAGC+TGG - chr3_4:76896355-76896374 Msa0523520:intron 55.0%
AAAACCCCTAGCTTGGCCCT+TGG - chr3_4:76896463-76896482 Msa0523520:intron 55.0%
AAACCCCTAGCTTGGCCCTT+GGG - chr3_4:76896464-76896483 Msa0523520:intron 55.0%
AGGCTGGGGGAGAGTAACTT+GGG + chr3_4:76897111-76897130 None:intergenic 55.0%
TAGGCTGGGGGAGAGTAACT+TGG + chr3_4:76897112-76897131 None:intergenic 55.0%
GAGGCGCGTACAACTACAGT+AGG - chr3_4:76897447-76897466 Msa0523520:intron 55.0%
GGGCGGTTCTTCAGGAAGCA+AGG - chr3_4:76889702-76889721 Msa0523520:intron 60.0%
!! TGCACTGGGTTTGCTGCACC+AGG - chr3_4:76890611-76890630 Msa0523520:intron 60.0%
!! GTGGGGTATTTCTGGCCGAG+TGG + chr3_4:76891411-76891430 None:intergenic 60.0%
GGTGGTTTGAGCATGCGTGG+AGG - chr3_4:76891629-76891648 Msa0523520:intron 60.0%
ATGTAGCCGATCCCGCCTAG+TGG - chr3_4:76891897-76891916 Msa0523520:CDS 60.0%
TGTAGCCGATCCCGCCTAGT+GGG - chr3_4:76891898-76891917 Msa0523520:CDS 60.0%
CGATCCCGCCTAGTGGGATA+AGG - chr3_4:76891904-76891923 Msa0523520:CDS 60.0%
CCGCCTAGTGGGATAAGGCT+TGG - chr3_4:76891909-76891928 Msa0523520:CDS 60.0%
TGCCAGTGTGCTCACAGCAC+CGG + chr3_4:76893660-76893679 None:intergenic 60.0%
TCTTCTTTCGGCGGAGGGTG+AGG + chr3_4:76894092-76894111 None:intergenic 60.0%
!! GGAGGAGCACCCAAACCAGT+TGG + chr3_4:76894495-76894514 None:intergenic 60.0%
GGTTTGGGTGCTCCTCCAAG+TGG - chr3_4:76894498-76894517 Msa0523520:intron 60.0%
! GTTGATGGGGGACCACTTGG+AGG + chr3_4:76894513-76894532 None:intergenic 60.0%
! GCTGTTGATGGGGGACCACT+TGG + chr3_4:76894516-76894535 None:intergenic 60.0%
TTACCAGTCCTCAGCGCCTG+TGG - chr3_4:76894693-76894712 Msa0523520:CDS 60.0%
!! CCAAGTGTTGGCACTCCCTC+AGG + chr3_4:76895032-76895051 None:intergenic 60.0%
!! CCTGAGGGAGTGCCAACACT+TGG - chr3_4:76895029-76895048 Msa0523520:intron 60.0%
CTTCAGCCTCACCAGTGGTC+GGG + chr3_4:76895197-76895216 None:intergenic 60.0%
TCTTGGCCCAAGGGAGAGCT+TGG - chr3_4:76895356-76895375 Msa0523520:intron 60.0%
CTTCGGCCAAGCTCTCCCTT+GGG + chr3_4:76895365-76895384 None:intergenic 60.0%
CTTTCGGCGGAGGGTGAGGA+GGG + chr3_4:76894088-76894107 None:intergenic 65.0%
TCTTTCGGCGGAGGGTGAGG+AGG + chr3_4:76894089-76894108 None:intergenic 65.0%
! AGTGAGCTCCACAGGCGCTG+AGG + chr3_4:76894704-76894723 None:intergenic 65.0%
GGTTGACCCGACCACTGGTG+AGG - chr3_4:76895188-76895207 Msa0523520:intron 65.0%
GGGCCCTGATTGTGAGCGAG+TGG - chr3_4:76895323-76895342 Msa0523520:intron 65.0%
GCTTCGGCCAAGCTCTCCCT+TGG + chr3_4:76895366-76895385 None:intergenic 65.0%
TGTACTCAGGGCCGGCCCAA+GGG + chr3_4:76896482-76896501 None:intergenic 65.0%
TTGTACTCAGGGCCGGCCCA+AGG + chr3_4:76896483-76896502 None:intergenic 65.0%
!! GGCCGGTGCTGTGAGCACAC+TGG - chr3_4:76893655-76893674 Msa0523520:CDS 70.0%
!! GCTCCACAGGCGCTGAGGAC+TGG + chr3_4:76894699-76894718 None:intergenic 70.0%
CGGCCCAAGGGCCAAGCTAG+GGG + chr3_4:76896470-76896489 None:intergenic 70.0%
CCGGCCCAAGGGCCAAGCTA+GGG + chr3_4:76896471-76896490 None:intergenic 70.0%
CCCTAGCTTGGCCCTTGGGC+CGG - chr3_4:76896468-76896487 Msa0523520:intron 70.0%
!! GTGGGCTGTGCAGGGTACCG+AGG - chr3_4:76897733-76897752 Msa0523520:intron 70.0%
GCCGGCCCAAGGGCCAAGCT+AGG + chr3_4:76896472-76896491 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 76888935 76898323 76888935 ID=Msa0523520;Name=Msa0523520
chr3_4 mRNA 76888935 76898323 76888935 ID=Msa0523520-mRNA-1;Parent=Msa0523520;Name=Msa0523520-mRNA-1;_AED=0.08;_eAED=0.08;_QI=176|1|1|1|1|1|18|383|887
chr3_4 exon 76888935 76889512 76888935 ID=Msa0523520-mRNA-1:exon:22460;Parent=Msa0523520-mRNA-1
chr3_4 exon 76891830 76892069 76891830 ID=Msa0523520-mRNA-1:exon:22459;Parent=Msa0523520-mRNA-1
chr3_4 exon 76892170 76892343 76892170 ID=Msa0523520-mRNA-1:exon:22458;Parent=Msa0523520-mRNA-1
chr3_4 exon 76892427 76892558 76892427 ID=Msa0523520-mRNA-1:exon:22457;Parent=Msa0523520-mRNA-1
chr3_4 exon 76892659 76892856 76892659 ID=Msa0523520-mRNA-1:exon:22456;Parent=Msa0523520-mRNA-1
chr3_4 exon 76892927 76893067 76892927 ID=Msa0523520-mRNA-1:exon:22455;Parent=Msa0523520-mRNA-1
chr3_4 exon 76893382 76893432 76893382 ID=Msa0523520-mRNA-1:exon:22454;Parent=Msa0523520-mRNA-1
chr3_4 exon 76893549 76893704 76893549 ID=Msa0523520-mRNA-1:exon:22453;Parent=Msa0523520-mRNA-1
chr3_4 exon 76893803 76893974 76893803 ID=Msa0523520-mRNA-1:exon:22452;Parent=Msa0523520-mRNA-1
chr3_4 exon 76894086 76894336 76894086 ID=Msa0523520-mRNA-1:exon:22451;Parent=Msa0523520-mRNA-1
chr3_4 exon 76894517 76894750 76894517 ID=Msa0523520-mRNA-1:exon:22450;Parent=Msa0523520-mRNA-1
chr3_4 exon 76894827 76894934 76894827 ID=Msa0523520-mRNA-1:exon:22449;Parent=Msa0523520-mRNA-1
chr3_4 exon 76896626 76896727 76896626 ID=Msa0523520-mRNA-1:exon:22448;Parent=Msa0523520-mRNA-1
chr3_4 exon 76896817 76897017 76896817 ID=Msa0523520-mRNA-1:exon:22447;Parent=Msa0523520-mRNA-1
chr3_4 exon 76897131 76897244 76897131 ID=Msa0523520-mRNA-1:exon:22446;Parent=Msa0523520-mRNA-1
chr3_4 exon 76897329 76897379 76897329 ID=Msa0523520-mRNA-1:exon:22445;Parent=Msa0523520-mRNA-1
chr3_4 exon 76897492 76897589 76897492 ID=Msa0523520-mRNA-1:exon:22444;Parent=Msa0523520-mRNA-1
chr3_4 exon 76898102 76898323 76898102 ID=Msa0523520-mRNA-1:exon:22443;Parent=Msa0523520-mRNA-1
chr3_4 five_prime_UTR 76898148 76898323 76898148 ID=Msa0523520-mRNA-1:five_prime_utr;Parent=Msa0523520-mRNA-1
chr3_4 CDS 76898102 76898147 76898102 ID=Msa0523520-mRNA-1:cds;Parent=Msa0523520-mRNA-1
chr3_4 CDS 76897492 76897589 76897492 ID=Msa0523520-mRNA-1:cds;Parent=Msa0523520-mRNA-1
chr3_4 CDS 76897329 76897379 76897329 ID=Msa0523520-mRNA-1:cds;Parent=Msa0523520-mRNA-1
chr3_4 CDS 76897131 76897244 76897131 ID=Msa0523520-mRNA-1:cds;Parent=Msa0523520-mRNA-1
chr3_4 CDS 76896817 76897017 76896817 ID=Msa0523520-mRNA-1:cds;Parent=Msa0523520-mRNA-1
chr3_4 CDS 76896626 76896727 76896626 ID=Msa0523520-mRNA-1:cds;Parent=Msa0523520-mRNA-1
chr3_4 CDS 76894827 76894934 76894827 ID=Msa0523520-mRNA-1:cds;Parent=Msa0523520-mRNA-1
chr3_4 CDS 76894517 76894750 76894517 ID=Msa0523520-mRNA-1:cds;Parent=Msa0523520-mRNA-1
chr3_4 CDS 76894086 76894336 76894086 ID=Msa0523520-mRNA-1:cds;Parent=Msa0523520-mRNA-1
chr3_4 CDS 76893803 76893974 76893803 ID=Msa0523520-mRNA-1:cds;Parent=Msa0523520-mRNA-1
chr3_4 CDS 76893549 76893704 76893549 ID=Msa0523520-mRNA-1:cds;Parent=Msa0523520-mRNA-1
chr3_4 CDS 76893382 76893432 76893382 ID=Msa0523520-mRNA-1:cds;Parent=Msa0523520-mRNA-1
chr3_4 CDS 76892927 76893067 76892927 ID=Msa0523520-mRNA-1:cds;Parent=Msa0523520-mRNA-1
chr3_4 CDS 76892659 76892856 76892659 ID=Msa0523520-mRNA-1:cds;Parent=Msa0523520-mRNA-1
chr3_4 CDS 76892427 76892558 76892427 ID=Msa0523520-mRNA-1:cds;Parent=Msa0523520-mRNA-1
chr3_4 CDS 76892170 76892343 76892170 ID=Msa0523520-mRNA-1:cds;Parent=Msa0523520-mRNA-1
chr3_4 CDS 76891830 76892069 76891830 ID=Msa0523520-mRNA-1:cds;Parent=Msa0523520-mRNA-1
chr3_4 CDS 76889318 76889512 76889318 ID=Msa0523520-mRNA-1:cds;Parent=Msa0523520-mRNA-1
chr3_4 three_prime_UTR 76888935 76889317 76888935 ID=Msa0523520-mRNA-1:three_prime_utr;Parent=Msa0523520-mRNA-1
Gene Sequence

>Msa0523520

ATGGCTCAACCACTCGTGAAGAAAGATGATGACCGCGACGATGAAGCTGAGTATTCCCCTTTCATGGGAATTGAAAAGGGGGCGGTTCTTCAGGAAGCAAGGGTTTTTAATGATCCACAATTAGATGCTAGGAGATGCTCACAGGTTATTACAAAGCTGCTATACCTACTGAATCAGGGAGAGACTTTTACAAAGACCGAAGCCACAGAAGTTTTCTTTGCTGTCACTAAGCTTTTCCAGTCTAAAGATATGGGATTAAGGAGAATGGTGTATCTGATGATAAAGGAGATATCTCCCTCTGCAGACGAGGTTATTATTGTCACAAGCTCTCTTATGAAGGACATGAATAGCAAGATTGATATGTATAGAGCAAATGCCATTCGAGTGCTGTGTCGTATCACAGACGGAACCCTCCTGGCACAAATTGAGCGGTATTTGAAACAAGCAATTGTAGATAAGAATCCAATTGTTGCAAGTGCTGCCTTAGTCAGTGGCATTCATCTACTACAGACAAATCCTGAAATTGTAAAAAGGTGGAGCAATGAGGTTCAGGAATCTGTTCAATCAAGAGCAGCTTTTGTACAGTTTCATGCACTGGGTTTGCTGCACCAGATACGACAGAATGATCGGCTAGCTGTTAGCAAGCTTGTTAGCAGCTTGACAAGGGGGGCTGTTCGCTCTCCTTTAGCCCAGTGCCTGTTGATTCGTTACACAAGTCAGGTTATCTGTGAGTCAGGAAATAATACACAGTCAGGGGACCGCCCCTTCTATGATTTTCTTGAGAGTTGCCTACGTCACAAGTCAGAAATGGTGATTTTTGAAGCTGCCAGAGCTATTACAGAGCTCAATGGTGTAACAAGCCGAGAATTAAATCCAGCAATTACTGTTCTTCAGCTATTCTTAAGCTCTTCTAAGCCAGTTTTAAGATTTGCTGCTGTTCGCACCTTGAACAAGGTGGCAATGATACACCCAACATCAGTCACTAACTGCAACATTGATATGGAAAGTTTAATCTCTGACCAGAACAGAAGCATTGCCACACTTGCTATTACTACACTTTTGAAGACAGGAAATGAATCAAGTGTGGATCGTCTTATGAAACAGATTACAAATTTCATGTCTGATATTGCTGATGAGTTCAAAATCGTCGTTGTTGAAGCAATAAGATCATTGTGCCAGAAGTTCCCATTAAAATATAGATCTCTCATGAATTTCCTGAGTAACATTCTTAGGGAAGAAGGTGGTTTTGAGTACAAGAAGGCAATTGTAGATTCAATTGTGATTCTCATTAGAGAAATCCCTGATGCAAAGGAAACAGGGTTACTTCATCTCTGTGAGTTCATTGAAGATTGCGAGTTCACTTATCTGTCTACGCAGATACTACACTTCCTGGGAATTGAAGGGCCAAAAACATCAGACCCTAGCAAATATATTCGTTTCATTTACAATCGAGTACATCTTGAGAATGCAACAGTGAGGGCCGGTGCTGTGAGCACACTGGCAAAGTTTGGTGCTGCAGTTGATGAGTTAAAGCCGCGCATATTTGTTTTGCTAAGGCGATGTCTTTTTGACAGTGATGATGAGGTGCGTGATAGAGCAACCCTTTATCTAAACACACTTGGAGGTGATGGTTCTGTTGTTGAGACTGATAAAGCTGTAAAGGACTTCCTGTTTGGGCCATTTGATATCCCGCTTGTCAATCTGGAGACTAGTTTGAAAAATTATGAGCCTTCAGAAGAGGCTTTTGACATTGATTCTGTGCCCAAGGAAGTCAAATCCCAACCACTTGCAGAGAAGAAAGCCTCTGGTAAAAAGCCAACTGGTTTGGGTGCTCCTCCAAGTGGTCCCCCATCAACAGCTGATGCATATCAGAGAGTGCTTTCCTCCATTCCAGAGTTTGCAAACTTTGGGAACCTTTTTAAGTCCTCAGCGCCTGTGGAGCTCACTGAAGCTGAGACAGAATATGCAGTTAATGTCGTTAAACACATTTTTGATAGGCATGTTGTGTTCCAGTACAACTGCACAAACACGATACCAGAGCAATTATTAGAACATGTTATCGTAATTGTGGATAATTCAGAAGCAGATGAGTTTTCAGAGGTGTTCTCCAAGCCTCTCAAGTCTCTTCCATATGATTCACCTGGACAGATTTTTGTGGCATTTGAGAAGCCTGAGGGAGTGCCAACACTTGGGAAATTTTCTAACGTTCTGAAGTTTATTGTTCGAGAGGTTGACCCGACCACTGGTGAGGCTGAAGATGATGGTGTTGAAGATGAATACCAGCTAGAGGATCTGGAGATCGTTTCAGCAGATTACACATTGAAAGTGGGGGTATCTAATTTCAGGAATGCATGGGAAAGCATGGGCCCTGATTGTGAGCGAGTGGATGAGTATGGTCTTGGCCCAAGGGAGAGCTTGGCCGAAGCTGTAAATACTGTCATCAACCTTCTTGGCTTGCAGCCTTGTGAGGGTACCGAGGTTGTTCCACCCAATTCAAGATCACACACATGTTTGTTGTCGGGTGTATTCATAGGAAATATAAAGGTGCTTGTGCGGTTGTCTTTTGGACTTGACGGTCCAAAGGATGTTGCAATGAAATTGACTGTCAGATCCGAGGATGAAACTGTCAGTGATGCCATTCATGAGATTGTGGCTAGCGGATAA

Protein sequence

>Msa0523520

MAQPLVKKDDDRDDEAEYSPFMGIEKGAVLQEARVFNDPQLDARRCSQVITKLLYLLNQGETFTKTEATEVFFAVTKLFQSKDMGLRRMVYLMIKEISPSADEVIIVTSSLMKDMNSKIDMYRANAIRVLCRITDGTLLAQIERYLKQAIVDKNPIVASAALVSGIHLLQTNPEIVKRWSNEVQESVQSRAAFVQFHALGLLHQIRQNDRLAVSKLVSSLTRGAVRSPLAQCLLIRYTSQVICESGNNTQSGDRPFYDFLESCLRHKSEMVIFEAARAITELNGVTSRELNPAITVLQLFLSSSKPVLRFAAVRTLNKVAMIHPTSVTNCNIDMESLISDQNRSIATLAITTLLKTGNESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLCQKFPLKYRSLMNFLSNILREEGGFEYKKAIVDSIVILIREIPDAKETGLLHLCEFIEDCEFTYLSTQILHFLGIEGPKTSDPSKYIRFIYNRVHLENATVRAGAVSTLAKFGAAVDELKPRIFVLLRRCLFDSDDEVRDRATLYLNTLGGDGSVVETDKAVKDFLFGPFDIPLVNLETSLKNYEPSEEAFDIDSVPKEVKSQPLAEKKASGKKPTGLGAPPSGPPSTADAYQRVLSSIPEFANFGNLFKSSAPVELTEAETEYAVNVVKHIFDRHVVFQYNCTNTIPEQLLEHVIVIVDNSEADEFSEVFSKPLKSLPYDSPGQIFVAFEKPEGVPTLGKFSNVLKFIVREVDPTTGEAEDDGVEDEYQLEDLEIVSADYTLKVGVSNFRNAWESMGPDCERVDEYGLGPRESLAEAVNTVINLLGLQPCEGTEVVPPNSRSHTCLLSGVFIGNIKVLVRLSFGLDGPKDVAMKLTVRSEDETVSDAIHEIVASG*