AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0968210


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0968210 MtrunA17_Chr3g0144501 99.436 887 5 0 1 887 1 887 0.0 1808
Msa0968210 MtrunA17_Chr4g0034881 90.203 888 83 2 1 887 1 885 0.0 1631
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0968210 AT4G34450.1 84.555 887 136 1 1 887 1 886 0.0 1564
Msa0968210 AT2G16200.1 60.870 69 27 0 819 887 1 69 6.14e-24 96.3
Msa0968210 AT2G16200.2 61.538 65 25 0 823 887 19 83 2.72e-22 92.0

Find 224 sgRNAs with CRISPR-Local

Find 648 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTCCTGAGTAACATTCTT+AGG 0.185985 6_3:+98439403 Msa0968210:CDS
TTTGTCCCTTACTGCATTCT+TGG 0.197372 6_3:+98444172 Msa0968210:three_prime_UTR
TTCTTCTTCTTGTTATTCTC+TGG 0.225543 6_3:+98435122 Msa0968210:five_prime_UTR
CTCCAAGTGTGTTTAGATAA+AGG 0.246814 6_3:-98440319 None:intergenic
GTGCTTGTGCGGTTGTCTTT+TGG 0.261791 6_3:+98443921 Msa0968210:CDS
AATACTGTCATCAACCTTCT+TGG 0.299187 6_3:+98441500 Msa0968210:CDS
TGCTGCAGTTGATGAGTTAA+AGG 0.303960 6_3:+98439802 Msa0968210:CDS
CAAGTGTATGAACCTTAAAA+AGG 0.314495 6_3:-98440700 None:intergenic
AATTTCATTGCAACATCCTT+TGG 0.320288 6_3:-98443954 None:intergenic
ATCCCTGATGCAAAGGAAAC+AGG 0.331509 6_3:+98439489 Msa0968210:CDS
GTGTGGCAATGCTTCTGTTC+TGG 0.335873 6_3:-98439101 None:intergenic
CAAATCCTGAAATTGTAAAA+AGG 0.336682 6_3:+98436648 Msa0968210:CDS
CACTAACTGCAACATTGATA+TGG 0.336809 6_3:+98439062 Msa0968210:CDS
CCCTTTCATGGGAATTGAAA+AGG 0.339316 6_3:+98435795 Msa0968210:CDS
AGTCTAAAGATATGGGATTA+AGG 0.341479 6_3:+98436173 Msa0968210:CDS
ATTCCAGAGTTTGCAAACTT+TGG 0.345897 6_3:+98440674 Msa0968210:CDS
GCTGTAAAGGACTTCCTGTT+TGG 0.348577 6_3:+98440371 Msa0968210:CDS
GCTGCTATACCTACTGAATC+AGG 0.351960 6_3:+98436006 Msa0968210:CDS
TTCCAGAGTTTGCAAACTTT+GGG 0.353146 6_3:+98440675 Msa0968210:CDS
AACCCTGTTTCCTTTGCATC+AGG 0.353442 6_3:-98439492 None:intergenic
AGCTGAGTATTCCCCTTTCA+TGG 0.357213 6_3:+98435783 Msa0968210:intron
TAATGAGATTGGATTTAATC+AGG 0.362311 6_3:+98444088 Msa0968210:three_prime_UTR
GGTTGGGATTTGACTTCCTT+GGG 0.363696 6_3:-98440548 None:intergenic
TAATTGCTGGATTTAATTCT+CGG 0.364724 6_3:-98438762 None:intergenic
TCCAAGTGTGTTTAGATAAA+GGG 0.365379 6_3:-98440318 None:intergenic
TCTTCTTCTTGTTATTCTCT+GGG 0.371148 6_3:+98435123 Msa0968210:five_prime_UTR
TTTCTTCTCTGCAAGTGGTT+GGG 0.373606 6_3:-98440564 None:intergenic
AAGGTGGAGCAATGAGGTTC+AGG 0.374504 6_3:+98436667 Msa0968210:CDS
TGATATCCCGCTTGTCAATC+TGG 0.376165 6_3:+98440400 Msa0968210:CDS
GCTTCGGCCAAGCTCTCCCT+TGG 0.377356 6_3:-98441473 None:intergenic
CTTTCTTCTCTGCAAGTGGT+TGG 0.377425 6_3:-98440565 None:intergenic
TTGTTGTCGGGTGTATTCAT+AGG 0.378216 6_3:+98443888 Msa0968210:CDS
TAAAGAATTACAAAACTATT+CGG 0.378988 6_3:+98444129 Msa0968210:three_prime_UTR
CCAAGTGTTGGCACTCCCTC+AGG 0.379387 6_3:-98441139 None:intergenic
ACCATAGATACTACACTTCC+TGG 0.389860 6_3:+98439661 Msa0968210:intron
AAGTGTATTCCAATAGTTAT+AGG 0.393001 6_3:-98444230 None:intergenic
TCATCCACTCGCTCACAATC+AGG 0.394231 6_3:-98441437 None:intergenic
CATCACGGTAGCTGAATCTC+AGG 0.396731 6_3:-98435203 None:intergenic
TGGTTGGGATTTGACTTCCT+TGG 0.403046 6_3:-98440549 None:intergenic
ACATGTGTGTGATCTTGAAT+TGG 0.404356 6_3:-98443865 None:intergenic
AGCTGAAGAACAGTAATTGC+TGG 0.405937 6_3:-98438775 None:intergenic
TGATATGCATCAGCTGTTGA+TGG 0.408594 6_3:-98440635 None:intergenic
TGAATACCAGCTAGAGGATC+TGG 0.409994 6_3:+98441343 Msa0968210:CDS
ACTCTCAAGAAAATCATAGA+AGG 0.412468 6_3:-98438665 None:intergenic
TCAGGAAATAATACACAGTC+AGG 0.414520 6_3:+98438634 Msa0968210:CDS
AATGGTGTATCTGATGATAA+AGG 0.416830 6_3:+98436198 Msa0968210:CDS
TTCCCAAAGTTTGCAAACTC+TGG 0.416924 6_3:-98440677 None:intergenic
CCTTTCATGGGAATTGAAAA+GGG 0.417082 6_3:+98435796 Msa0968210:CDS
TGGCTAGCGGATAATCTATC+AGG 0.417740 6_3:+98444027 Msa0968210:exon
CTGTAAAGGACTTCCTGTTT+GGG 0.418816 6_3:+98440372 Msa0968210:CDS
TTGTAGGTTATCCGTGAGTC+AGG 0.424440 6_3:+98438616 Msa0968210:intron
ATCTGTCCAGGTGAATCATA+TGG 0.426484 6_3:-98441097 None:intergenic
TGCACTGGGTTTGCTGCACC+AGG 0.428277 6_3:+98436727 Msa0968210:CDS
TGTATTCATAGGAAATATAA+AGG 0.434356 6_3:+98443899 Msa0968210:CDS
GAATTACAAAACTATTCGGT+TGG 0.435782 6_3:+98444133 Msa0968210:three_prime_UTR
AAAGAAAACTTCTGTGGCTT+CGG 0.436034 6_3:-98436131 None:intergenic
ACAGCAGCAAATCTTAAAAC+TGG 0.438071 6_3:-98438817 None:intergenic
ACATGTTCTAATAATTGCTC+TGG 0.438709 6_3:-98440921 None:intergenic
AAGGCAGCACTCGCAACAAT+TGG 0.441719 6_3:-98436510 None:intergenic
CTACACTTCCTGGGAATTGA+AGG 0.445284 6_3:+98439671 Msa0968210:CDS
TCGTGTTTGTGCAGTTGTAC+TGG 0.450538 6_3:-98440896 None:intergenic
TTAATCCCATATCTTTAGAC+TGG 0.453175 6_3:-98436171 None:intergenic
GTGAGCACACTGGCAAAGTT+TGG 0.453513 6_3:+98439779 Msa0968210:CDS
AATGTTGGGCCTATAACTAT+TGG 0.461648 6_3:+98444221 Msa0968210:three_prime_UTR
TAGATGAATGCCACTGACTA+AGG 0.465517 6_3:-98436529 None:intergenic
ACAAAGGCTTACCTTGTTCA+AGG 0.466919 6_3:-98438845 None:intergenic
CTTCGGCCAAGCTCTCCCTT+GGG 0.468883 6_3:-98441472 None:intergenic
TTTCCTGAGTAACATTCTTA+GGG 0.469038 6_3:+98439404 Msa0968210:CDS
TGCAGTTAGTGACTGATGTT+GGG 0.469707 6_3:-98439050 None:intergenic
CCTGAGGGAGTGCCAACACT+TGG 0.469769 6_3:+98441139 Msa0968210:CDS
GGATATCAAATGGCCCAAAC+AGG 0.470482 6_3:-98440385 None:intergenic
GATGACAGTATTTACAGCTT+CGG 0.472343 6_3:-98441489 None:intergenic
TGGTAGACTAGCAACGATAC+TGG 0.472490 6_3:+98444192 Msa0968210:three_prime_UTR
AATTACAAAACTATTCGGTT+GGG 0.473266 6_3:+98444134 Msa0968210:three_prime_UTR
TGGAAGAGACTTGAGAGGCT+TGG 0.479961 6_3:-98441077 None:intergenic
GATATGCATCAGCTGTTGAT+GGG 0.483197 6_3:-98440634 None:intergenic
ATGATCCACAATTAGATGCT+AGG 0.484554 6_3:+98435848 Msa0968210:CDS
ATCACACACATGTTTGTTGT+CGG 0.484824 6_3:+98443875 Msa0968210:CDS
TGTCACAAGCTCTCTTATGA+AGG 0.484923 6_3:+98436365 Msa0968210:CDS
ATCAACAGGCACTGGGCTAA+AGG 0.485148 6_3:-98438507 None:intergenic
ATGAAACGAATATATTTGCT+AGG 0.487145 6_3:-98439710 None:intergenic
TGTGAGCGAGTGGATGAGTA+TGG 0.487810 6_3:+98441443 Msa0968210:CDS
TCACACACATGTTTGTTGTC+GGG 0.490724 6_3:+98443876 Msa0968210:CDS
TGTTCAGGTTATCGTAATTG+TGG 0.491311 6_3:+98441018 Msa0968210:intron
CTTCAGCCTCACCAGTGGTC+GGG 0.493984 6_3:-98441304 None:intergenic
GATGATGACCGCGACGATGA+AGG 0.496667 6_3:+98435247 Msa0968210:CDS
TCTTGGCCCAAGGGAGAGCT+TGG 0.497009 6_3:+98441466 Msa0968210:CDS
TCAGCTTCAGTGAGCTCCAC+AGG 0.501358 6_3:-98440819 None:intergenic
CAGTGGCATTCATCTACTAC+AGG 0.502394 6_3:+98436536 Msa0968210:CDS
CTAAACACACTTGGAGGTGA+TGG 0.503784 6_3:+98440326 Msa0968210:CDS
CCTACGTCACAAGTCAGAAA+TGG 0.504171 6_3:+98438690 Msa0968210:CDS
CGATACTGGAAGTATAATGT+TGG 0.504361 6_3:+98444206 Msa0968210:three_prime_UTR
TGTAACGAATCAACAGGCAC+TGG 0.507041 6_3:-98438515 None:intergenic
GAGGCTTTCTTCTCTGCAAG+TGG 0.508958 6_3:-98440569 None:intergenic
GTTGATTCGTTACACAAGTC+AGG 0.509253 6_3:+98438524 Msa0968210:CDS
AGCAGATTACACATTGAAAG+TGG 0.510396 6_3:+98441376 Msa0968210:CDS
TGAGACTGATAAAGCTGTAA+AGG 0.512160 6_3:+98440358 Msa0968210:CDS
CTTTATCTAAACACACTTGG+AGG 0.512500 6_3:+98440320 Msa0968210:CDS
GGGCAGTTCTTCAGGAAGCA+AGG 0.513040 6_3:+98435818 Msa0968210:CDS
GAATGAATGCACAACTCACT+CGG 0.514915 6_3:-98435165 None:intergenic
AGTAACATTCTTAGGGAAGA+AGG 0.515461 6_3:+98439411 Msa0968210:CDS
CGAGTGGATGAGTATGGTCT+TGG 0.517300 6_3:+98441449 Msa0968210:CDS
ATTGAGCTCTGTAATAGCTC+TGG 0.517722 6_3:-98438728 None:intergenic
CACAAGGCTGCAAGCCAAGA+AGG 0.517906 6_3:-98441514 None:intergenic
TTAGAAAATTTCCCAAGTGT+TGG 0.518435 6_3:-98441151 None:intergenic
TTTGTACAGTTTCATGCACT+GGG 0.519283 6_3:+98436713 Msa0968210:CDS
TTGACAAGCGGGATATCAAA+TGG 0.520695 6_3:-98440395 None:intergenic
TCTTGGCTTGCAGCCTTGTG+AGG 0.521858 6_3:+98441517 Msa0968210:CDS
AGATGCTAGGAGATGCTCAC+AGG 0.523187 6_3:+98435861 Msa0968210:CDS
TGCCAGTGTGCTCACAGCAC+CGG 0.525008 6_3:-98439771 None:intergenic
ACCCTTTATCTAAACACACT+TGG 0.526555 6_3:+98440317 Msa0968210:CDS
AGCTTGTTAGCAGCTTGACA+AGG 0.527263 6_3:+98438469 Msa0968210:CDS
CAGGAATGCATGGGAAAGCA+TGG 0.529009 6_3:+98441412 Msa0968210:CDS
CTTCCCTAAGAATGTTACTC+AGG 0.529688 6_3:-98439407 None:intergenic
TTGCAGTTAGTGACTGATGT+TGG 0.530937 6_3:-98439051 None:intergenic
TTTCAGGTTGACCCGACCAC+TGG 0.531469 6_3:+98441293 Msa0968210:intron
AATACCGCTCAATTTGTGCC+AGG 0.533594 6_3:-98436461 None:intergenic
TCCCTGATGCAAAGGAAACA+GGG 0.533650 6_3:+98439490 Msa0968210:CDS
TATCTAATTTCAGGAATGCA+TGG 0.536835 6_3:+98441402 Msa0968210:CDS
AGATATGGGATTAAGGAGAA+TGG 0.538106 6_3:+98436180 Msa0968210:CDS
GATACTGGAAGTATAATGTT+GGG 0.538272 6_3:+98444207 Msa0968210:three_prime_UTR
CGATCTCCAGATCCTCTAGC+TGG 0.539710 6_3:-98441349 None:intergenic
GCTAGCCACAATCTCATGAA+TGG 0.540300 6_3:-98444012 None:intergenic
TCTTCAGCCTCACCAGTGGT+CGG 0.543872 6_3:-98441305 None:intergenic
TGCAGATACGACAGAATGAT+CGG 0.545783 6_3:+98438433 Msa0968210:intron
GGCAGTTCTTCAGGAAGCAA+GGG 0.545910 6_3:+98435819 Msa0968210:CDS
TATCACAGACGGAACCCTCC+TGG 0.546089 6_3:+98436443 Msa0968210:CDS
ATCACTGACAGTTTCATCCT+CGG 0.547476 6_3:-98443988 None:intergenic
GACTTGTGTAACGAATCAAC+AGG 0.547682 6_3:-98438521 None:intergenic
ATGAGTATGGTCTTGGCCCA+AGG 0.547932 6_3:+98441456 Msa0968210:CDS
TGAAACGAATATATTTGCTA+GGG 0.549359 6_3:-98439709 None:intergenic
TCATCATCTTTCTTCACGAG+TGG 0.549801 6_3:-98435232 None:intergenic
AAAGTTTGCAAACTCTGGAA+TGG 0.551843 6_3:-98440672 None:intergenic
TGCTGTTCGCACCTTGAACA+AGG 0.552650 6_3:+98438834 Msa0968210:CDS
TTACCAGTCCTCAGCGCCTG+TGG 0.552709 6_3:+98440803 Msa0968210:intron
ACCCTGTTTCCTTTGCATCA+GGG 0.556360 6_3:-98439491 None:intergenic
ATGTCAAAAGCCTCTTCTGA+AGG 0.557152 6_3:-98440515 None:intergenic
TAGTCTCCAGATTGACAAGC+GGG 0.559078 6_3:-98440406 None:intergenic
GTGTATTATTTCCTGACTCA+CGG 0.561221 6_3:-98438627 None:intergenic
CATGTGTGTGATCTTGAATT+GGG 0.562867 6_3:-98443864 None:intergenic
GCTGAGTATTCCCCTTTCAT+GGG 0.563911 6_3:+98435784 Msa0968210:intron
TAGAGAAATCCCTGATGCAA+AGG 0.564716 6_3:+98439482 Msa0968210:CDS
GCAGATTACACATTGAAAGT+GGG 0.566190 6_3:+98441377 Msa0968210:CDS
GAATAACAAGAAGAAGAAGA+AGG 0.566843 6_3:-98435117 None:intergenic
CACCACTGGCTTACCTCACA+AGG 0.566963 6_3:-98441530 None:intergenic
AGTCTACCAAGAATGCAGTA+AGG 0.567615 6_3:-98444178 None:intergenic
CATCCACTCGCTCACAATCA+GGG 0.568503 6_3:-98441436 None:intergenic
ATCTAATTTCAGGAATGCAT+GGG 0.569745 6_3:+98441403 Msa0968210:CDS
CCGCTCAATTTGTGCCAGGA+GGG 0.571229 6_3:-98436457 None:intergenic
TGACATTGATTCTGTGCCCA+AGG 0.571264 6_3:+98440532 Msa0968210:CDS
CCATAGATACTACACTTCCT+GGG 0.571583 6_3:+98439662 Msa0968210:intron
CACGAGTGGTTGAGCCATCA+CGG 0.572119 6_3:-98435218 None:intergenic
TGAGTATGGTCTTGGCCCAA+GGG 0.575644 6_3:+98441457 Msa0968210:CDS
CTCTCAAGAAAATCATAGAA+GGG 0.578640 6_3:-98438664 None:intergenic
CTTGCAGAGAAGAAAGCCTC+TGG 0.580181 6_3:+98440572 Msa0968210:CDS
CATCTCCTAGCATCTAATTG+TGG 0.589567 6_3:-98435853 None:intergenic
GTTTGCAAACTCTGGAATGG+AGG 0.589800 6_3:-98440669 None:intergenic
AAGTGTAGTAATAGCAAGTG+TGG 0.589942 6_3:-98439118 None:intergenic
ATTACAGGAGCCTTCAGAAG+AGG 0.591072 6_3:+98440505 Msa0968210:intron
GACGACACAAACATTGGTCA+AGG 0.591081 6_3:-98444311 None:intergenic
TCTGAAGTTTATTGTTCGAG+AGG 0.592844 6_3:+98441177 Msa0968210:CDS
GAGAATGCAACAGTGAGGGC+CGG 0.593593 6_3:+98439752 Msa0968210:CDS
CTGCTATACCTACTGAATCA+GGG 0.594281 6_3:+98436007 Msa0968210:CDS
CTGAGGGAGTGCCAACACTT+GGG 0.595169 6_3:+98441140 Msa0968210:CDS
TCTTGAGAATGCAACAGTGA+GGG 0.598523 6_3:+98439748 Msa0968210:CDS
GTCTACCAAGAATGCAGTAA+GGG 0.599744 6_3:-98444177 None:intergenic
GCTTGTTAGCAGCTTGACAA+GGG 0.599912 6_3:+98438470 Msa0968210:CDS
GACAGGAAATGAATCAAGTG+TGG 0.601757 6_3:+98439146 Msa0968210:CDS
CTGAGATTCAGCTACCGTGA+TGG 0.604195 6_3:+98435204 Msa0968210:exon
AATGAATGCACAACTCACTC+GGG 0.605082 6_3:-98435164 None:intergenic
ACCGCTCAATTTGTGCCAGG+AGG 0.606317 6_3:-98436458 None:intergenic
AGAGCTATTACAGAGCTCAA+TGG 0.608497 6_3:+98438730 Msa0968210:CDS
GTAACGAATCAACAGGCACT+GGG 0.608764 6_3:-98438514 None:intergenic
CAAGTCACCTCGTCTGCAGA+GGG 0.609015 6_3:-98436229 None:intergenic
GGAGGAGCACCCAAACCAGT+TGG 0.609607 6_3:-98440602 None:intergenic
ACAAGTCACCTCGTCTGCAG+AGG 0.609964 6_3:-98436230 None:intergenic
CAGATTACACATTGAAAGTG+GGG 0.612267 6_3:+98441378 Msa0968210:CDS
TCTCTTCCATATGATTCACC+TGG 0.612987 6_3:+98441091 Msa0968210:CDS
AGGAATGCATGGGAAAGCAT+GGG 0.615686 6_3:+98441413 Msa0968210:CDS
AAGTCTCTCCCTGATTCAGT+AGG 0.615879 6_3:-98436015 None:intergenic
GAAATATAAAGGTGCTTGTG+CGG 0.616618 6_3:+98443910 Msa0968210:CDS
GTGGCATTTGAGAAGCCTGA+GGG 0.617748 6_3:+98441124 Msa0968210:CDS
ACTGGTGAGGCTGAAGATGA+TGG 0.618692 6_3:+98441311 Msa0968210:CDS
ATATGCATCAGCTGTTGATG+GGG 0.619854 6_3:-98440633 None:intergenic
GATATCTCCCTCTGCAGACG+AGG 0.620675 6_3:+98436222 Msa0968210:CDS
CAGGAAATAATACACAGTCA+GGG 0.625927 6_3:+98438635 Msa0968210:CDS
GATACGACACAGCACTCGAA+TGG 0.627712 6_3:-98436424 None:intergenic
CTTTCATGGGAATTGAAAAG+GGG 0.630111 6_3:+98435797 Msa0968210:CDS
GGTTTGGGTGCTCCTCCAAG+TGG 0.630511 6_3:+98440608 Msa0968210:CDS
AACATTCTTAGGGAAGAAGG+TGG 0.632595 6_3:+98439414 Msa0968210:CDS
TGTTAGCAGCTTGACAAGGG+GGG 0.633188 6_3:+98438473 Msa0968210:CDS
GGGCCCTGATTGTGAGCGAG+TGG 0.633246 6_3:+98441433 Msa0968210:CDS
TGATGCCATTCATGAGATTG+TGG 0.633282 6_3:+98444007 Msa0968210:CDS
CTTGTTAGCAGCTTGACAAG+GGG 0.635426 6_3:+98438471 Msa0968210:CDS
AGTGAGCTCCACAGGCGCTG+AGG 0.636968 6_3:-98440811 None:intergenic
CAAGAAAATCATAGAAGGGG+CGG 0.644100 6_3:-98438660 None:intergenic
CCCTCCTGGCACAAATTGAG+CGG 0.644481 6_3:+98436457 Msa0968210:CDS
TCATATGGAAGAGACTTGAG+AGG 0.644642 6_3:-98441082 None:intergenic
AGGAAATAATACACAGTCAG+GGG 0.645045 6_3:+98438636 Msa0968210:CDS
TGAATTGGGTGGAACAACCT+CGG 0.646733 6_3:-98443850 None:intergenic
TACACTTCCTGGGAATTGAA+GGG 0.647378 6_3:+98439672 Msa0968210:CDS
TCTCAAGAAAATCATAGAAG+GGG 0.647603 6_3:-98438663 None:intergenic
GGTTGACCCGACCACTGGTG+AGG 0.653086 6_3:+98441298 Msa0968210:intron
CCATTTCTGACTTGTGACGT+AGG 0.654222 6_3:-98438690 None:intergenic
TTGTTAGCAGCTTGACAAGG+GGG 0.655135 6_3:+98438472 Msa0968210:CDS
TGTGGCATTTGAGAAGCCTG+AGG 0.655854 6_3:+98441123 Msa0968210:CDS
GAAATTGACTGTCAGATCCG+AGG 0.656407 6_3:+98443971 Msa0968210:CDS
ATCATCTTCAGCCTCACCAG+TGG 0.659428 6_3:-98441309 None:intergenic
TGAAGATGAATACCAGCTAG+AGG 0.659647 6_3:+98441337 Msa0968210:CDS
GGCCGGTGCTGTGAGCACAC+TGG 0.659994 6_3:+98439769 Msa0968210:CDS
GACAGCAAAGAAAACTTCTG+TGG 0.662155 6_3:-98436137 None:intergenic
GTGTGTGATCTTGAATTGGG+TGG 0.662717 6_3:-98443861 None:intergenic
GTGGGCTGTGCAGGGTACCG+AGG 0.663992 6_3:+98443833 Msa0968210:intron
CTTAGCAAAACAAATATGCG+CGG 0.667793 6_3:-98439940 None:intergenic
GTGCTGTGTCGTATCACAGA+CGG 0.669972 6_3:+98436432 Msa0968210:CDS
ATCACGGTAGCTGAATCTCA+GGG 0.672400 6_3:-98435202 None:intergenic
TTTCATGGGAATTGAAAAGG+GGG 0.673800 6_3:+98435798 Msa0968210:CDS
GCGAGTGCTGCCTTAGTCAG+TGG 0.676555 6_3:+98436519 Msa0968210:CDS
ATCTTGAGAATGCAACAGTG+AGG 0.681270 6_3:+98439747 Msa0968210:CDS
CTAGTCTCCAGATTGACAAG+CGG 0.684081 6_3:-98440407 None:intergenic
ATTCATGAGATTGTGGCTAG+CGG 0.684649 6_3:+98444014 Msa0968210:CDS
AGATTACACATTGAAAGTGG+GGG 0.686745 6_3:+98441379 Msa0968210:CDS
GTTCACTTATCTGTCTACGC+AGG 0.694862 6_3:+98439548 Msa0968210:CDS
TATGCATCAGCTGTTGATGG+GGG 0.711908 6_3:-98440632 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTAAAATTTTAAAAATA+TGG + chr6_3:98440167-98440186 Msa0968210:intron 0.0%
!!! AAAATTTTAATAAATTGCAT+GGG - chr6_3:98437120-98437139 None:intergenic 10.0%
!! AATAAAATATATTTCACATT+AGG - chr6_3:98437203-98437222 None:intergenic 10.0%
!!! ATTAGTATAAATTCTAAAAA+GGG + chr6_3:98438384-98438403 Msa0968210:intron 10.0%
!!! GTAATTAGTTTAATAAAATA+TGG - chr6_3:98441689-98441708 None:intergenic 10.0%
!! AAAAATATATACCATTATAA+AGG - chr6_3:98442039-98442058 None:intergenic 10.0%
!! TAAAATAAAAAATAAACACA+AGG + chr6_3:98442265-98442284 Msa0968210:intron 10.0%
!!! AAAAAAAGAATTAAATTTTG+CGG + chr6_3:98442296-98442315 Msa0968210:intron 10.0%
!!! GAAATATATTTTAATTGTAT+TGG - chr6_3:98443635-98443654 None:intergenic 10.0%
!!! TATAGTTTTTTAGATTTGTA+TGG + chr6_3:98436267-98436286 Msa0968210:intron 15.0%
!!! GTGTTTTTTTCTTATAAATT+GGG - chr6_3:98437026-98437045 None:intergenic 15.0%
!!! AGTGTTTTTTTCTTATAAAT+TGG - chr6_3:98437027-98437046 None:intergenic 15.0%
!!! AAATTTTAATAAATTGCATG+GGG - chr6_3:98437119-98437138 None:intergenic 15.0%
!!! GAAAATTTTAATAAATTGCA+TGG - chr6_3:98437121-98437140 None:intergenic 15.0%
!! TACATTAAATATCTTAAAGA+AGG + chr6_3:98437328-98437347 Msa0968210:intron 15.0%
!! ACATTAAATATCTTAAAGAA+GGG + chr6_3:98437329-98437348 Msa0968210:intron 15.0%
!!! TCTAGAATATTAATAAGAAT+TGG + chr6_3:98437386-98437405 Msa0968210:intron 15.0%
!!! ATCTTTTTTTGCTTATAAAT+TGG + chr6_3:98437439-98437458 Msa0968210:intron 15.0%
!!! TCTTTTTTTGCTTATAAATT+GGG + chr6_3:98437440-98437459 Msa0968210:intron 15.0%
!!! CATTAGTATAAATTCTAAAA+AGG + chr6_3:98438383-98438402 Msa0968210:intron 15.0%
!! CAAATATTATGAGAATATTT+AGG - chr6_3:98438959-98438978 None:intergenic 15.0%
!!! TAGTAGTTTTATAATACTTT+TGG + chr6_3:98439868-98439887 Msa0968210:intron 15.0%
!!! AGTAGTTTTATAATACTTTT+GGG + chr6_3:98439869-98439888 Msa0968210:intron 15.0%
!!! AATTGCTTTTTTTTTATGTA+TGG + chr6_3:98440260-98440279 Msa0968210:intron 15.0%
!! TAATAAAATATGGTTTATCA+TGG - chr6_3:98441679-98441698 None:intergenic 15.0%
!!! AACCATTTTTCAATAAAAAA+AGG + chr6_3:98442887-98442906 Msa0968210:intron 15.0%
!!! TACCTTTTTTTATTGAAAAA+TGG - chr6_3:98442892-98442911 None:intergenic 15.0%
!!! CAAATAAACAAGATTATTTT+TGG - chr6_3:98443085-98443104 None:intergenic 15.0%
!!! TATCTTCTAATTTTTATTTG+TGG + chr6_3:98443814-98443833 Msa0968210:intron 15.0%
!!! ATCTTCTAATTTTTATTTGT+GGG + chr6_3:98443815-98443834 Msa0968210:intron 15.0%
!! TAAAGAATTACAAAACTATT+CGG + chr6_3:98444129-98444148 Msa0968210:three_prime_UTR 15.0%
!!! TTAATGTAATATGAATTTTG+AGG + chr6_3:98444283-98444302 Msa0968210:three_prime_UTR 15.0%
!!! TTAAGTACATTTCTTTTAAG+AGG + chr6_3:98436927-98436946 Msa0968210:intron 20.0%
!!! TTTTTTCTTATAAATTGGGA+CGG - chr6_3:98437022-98437041 None:intergenic 20.0%
!!! AATTTTAATAAATTGCATGG+GGG - chr6_3:98437118-98437137 None:intergenic 20.0%
!! CTTGAAACTAAATAAACATA+TGG - chr6_3:98437174-98437193 None:intergenic 20.0%
!! TGTATAAATAATTAATGCAG+AGG - chr6_3:98437228-98437247 None:intergenic 20.0%
!! GTGTTAATTATAATATGCAT+CGG - chr6_3:98437254-98437273 None:intergenic 20.0%
!! AATTTGCCAAAAATATAACT+AGG - chr6_3:98437367-98437386 None:intergenic 20.0%
!! GAATATTAATAAGAATTGGT+TGG + chr6_3:98437390-98437409 Msa0968210:intron 20.0%
!!! TAAATTGAATTTTTCCATCA+TGG - chr6_3:98438255-98438274 None:intergenic 20.0%
!!! AAACATTTAGAGAAGTATTA+CGG - chr6_3:98438291-98438310 None:intergenic 20.0%
!! CTATCTTCTATTATATTTGT+AGG + chr6_3:98438600-98438619 Msa0968210:intron 20.0%
!! AAACGAAATACTTATTCAAT+GGG - chr6_3:98438925-98438944 None:intergenic 20.0%
!! AAAACGAAATACTTATTCAA+TGG - chr6_3:98438926-98438945 None:intergenic 20.0%
!!! TTTGTTATTTTAATTGAGTG+CGG + chr6_3:98438997-98439016 Msa0968210:intron 20.0%
!!! ACAGAGATCTATATTTTAAT+GGG - chr6_3:98439269-98439288 None:intergenic 20.0%
!!! TACAGAGATCTATATTTTAA+TGG - chr6_3:98439270-98439289 None:intergenic 20.0%
!!! GTAGTTTTATAATACTTTTG+GGG + chr6_3:98439870-98439889 Msa0968210:intron 20.0%
!! AATAGAAAATCATCTTCTTT+CGG - chr6_3:98440218-98440237 None:intergenic 20.0%
!! TTGAAAAATTATGTAAGTCT+TGG + chr6_3:98440431-98440450 Msa0968210:intron 20.0%
!! AATTATATATATCCTTGTTC+AGG + chr6_3:98441003-98441022 Msa0968210:intron 20.0%
!! ATAAAAATCCCATAAATAGA+GGG - chr6_3:98441211-98441230 None:intergenic 20.0%
!! AATAAAAATCCCATAAATAG+AGG - chr6_3:98441212-98441231 None:intergenic 20.0%
!!! ATATTTCAAGTGTAAAATCT+CGG + chr6_3:98441258-98441277 Msa0968210:intron 20.0%
!! GACATAAATGCTAAATAAAA+TGG - chr6_3:98441587-98441606 None:intergenic 20.0%
!! AAATAACTCTACCTTTATAA+TGG + chr6_3:98442025-98442044 Msa0968210:intron 20.0%
!!! CTAAAGCAAATTTTATAATG+AGG + chr6_3:98442237-98442256 Msa0968210:intron 20.0%
!! CAAACTTATGGTATAAAAAA+AGG - chr6_3:98442537-98442556 None:intergenic 20.0%
!!! ATTTTAATGTTTTGTACTCA+GGG - chr6_3:98442594-98442613 None:intergenic 20.0%
!!! ATAAACAAGATTATTTTTGG+TGG - chr6_3:98443082-98443101 None:intergenic 20.0%
!!! TTTAGTCCCATATATTTTAT+TGG - chr6_3:98443359-98443378 None:intergenic 20.0%
!! AAATAAAAATATCAGCAACA+AGG + chr6_3:98443394-98443413 Msa0968210:intron 20.0%
!! TTTCTTTCTAAACATAAGTT+CGG + chr6_3:98443599-98443618 Msa0968210:intron 20.0%
!! TGTATTCATAGGAAATATAA+AGG + chr6_3:98443899-98443918 Msa0968210:CDS 20.0%
!!! AGATAAATTTTGATTCAAGA+TGG + chr6_3:98444051-98444070 Msa0968210:three_prime_UTR 20.0%
!! AATCTCATTAACAAAAAAGA+GGG - chr6_3:98444078-98444097 None:intergenic 20.0%
!! AATTGATTTCGATTCGTTAT+TGG + chr6_3:98435408-98435427 Msa0968210:intron 25.0%
!! ATTGTTGCTAATTGTGATTT+TGG + chr6_3:98435747-98435766 Msa0968210:intron 25.0%
! AATAACCTAGAAATTAGAGA+TGG - chr6_3:98435981-98436000 None:intergenic 25.0%
!! CTATTTCTTTGATCTTGTAA+AGG + chr6_3:98436335-98436354 Msa0968210:intron 25.0%
! ACAGAATTACAAATAGAACT+CGG - chr6_3:98436567-98436586 None:intergenic 25.0%
! CAAATCCTGAAATTGTAAAA+AGG + chr6_3:98436648-98436667 Msa0968210:CDS 25.0%
!! GTCTCTTTTGCTTATAATTT+GGG - chr6_3:98437057-98437076 None:intergenic 25.0%
! TTGGAACAATAGAATTAAGT+AGG - chr6_3:98437090-98437109 None:intergenic 25.0%
! TAAACATATGGATGATTCAT+CGG - chr6_3:98437162-98437181 None:intergenic 25.0%
!! TTTTTGCTTATAAATTGGGA+CGG + chr6_3:98437444-98437463 Msa0968210:intron 25.0%
! AACTGTTAAGAAAGAATTAG+AGG + chr6_3:98437866-98437885 Msa0968210:intron 25.0%
! AAGAAAGAATTAGAGGTTAA+TGG + chr6_3:98437873-98437892 Msa0968210:intron 25.0%
!! TATCTATATTGCTGTTGAAA+TGG + chr6_3:98438113-98438132 Msa0968210:intron 25.0%
!! ATTATCATCGCTGTAAATTT+TGG + chr6_3:98438168-98438187 Msa0968210:intron 25.0%
! GTAATTATCTTGTTGAATTC+TGG + chr6_3:98438218-98438237 Msa0968210:intron 25.0%
!! TAAATTCTAAAAAGGGTTTG+TGG + chr6_3:98438391-98438410 Msa0968210:intron 25.0%
! TAATTGCTGGATTTAATTCT+CGG - chr6_3:98438765-98438784 None:intergenic 25.0%
!! AAAATTTGAGTTATCGACAA+AGG - chr6_3:98438864-98438883 None:intergenic 25.0%
! AACGAAATACTTATTCAATG+GGG - chr6_3:98438924-98438943 None:intergenic 25.0%
! TATTCTCATAATATTTGCCT+TGG + chr6_3:98438962-98438981 Msa0968210:intron 25.0%
!!! TATATTTTAATGGGAACTTC+TGG - chr6_3:98439260-98439279 None:intergenic 25.0%
! TATGCAAGATATAGAATTTG+AGG - chr6_3:98439319-98439338 None:intergenic 25.0%
! ATAATTTATACCACTCGTTA+AGG - chr6_3:98439351-98439370 None:intergenic 25.0%
!! TGAAACGAATATATTTGCTA+GGG - chr6_3:98439712-98439731 None:intergenic 25.0%
! ATGAAACGAATATATTTGCT+AGG - chr6_3:98439713-98439732 None:intergenic 25.0%
!!! TAATACTTTTGGGGAATATT+TGG + chr6_3:98439879-98439898 Msa0968210:intron 25.0%
! TCTCAAAAAATGCATCATAA+AGG - chr6_3:98440008-98440027 None:intergenic 25.0%
!! AGAAGATGATTTTCTATTTC+TGG + chr6_3:98440220-98440239 Msa0968210:intron 25.0%
!!! TGGTATTTTGATTTATTTGC+AGG + chr6_3:98440280-98440299 Msa0968210:intron 25.0%
!!! TTTGTTTTTTGTTCCTTCAA+TGG + chr6_3:98440745-98440764 Msa0968210:intron 25.0%
! TATATTGTATTAGCCATTGA+AGG - chr6_3:98440761-98440780 None:intergenic 25.0%
!! TCGTTAAACACATTTTTGAT+AGG + chr6_3:98440862-98440881 Msa0968210:CDS 25.0%
! ATATAATTACAAACAAGACC+TGG - chr6_3:98440991-98441010 None:intergenic 25.0%
! TAAAAATCCCATAAATAGAG+GGG - chr6_3:98441210-98441229 None:intergenic 25.0%
!! TATTAATAGGCTAGTTAAGT+TGG + chr6_3:98441915-98441934 Msa0968210:intron 25.0%
!!! GTTGGTTGATATAAAGATTT+TGG + chr6_3:98441933-98441952 Msa0968210:intron 25.0%
! TAAAGATTTGATCCTAAGTA+TGG + chr6_3:98442322-98442341 Msa0968210:intron 25.0%
! TTCTATCAAAAACCATACTT+AGG - chr6_3:98442337-98442356 None:intergenic 25.0%
!! AACCAAATTGAATTTTCTTG+AGG + chr6_3:98442511-98442530 Msa0968210:intron 25.0%
!!! GATTTTAATGTTTTGTACTC+AGG - chr6_3:98442595-98442614 None:intergenic 25.0%
!!! TCGTTTTTCCAAAGATTATT+GGG - chr6_3:98443112-98443131 None:intergenic 25.0%
!!! ATCGTTTTTCCAAAGATTAT+TGG - chr6_3:98443113-98443132 None:intergenic 25.0%
! TCATTGACAACTAATCTAAT+TGG + chr6_3:98443138-98443157 Msa0968210:intron 25.0%
!! TTTGGTTTCAAAATCCAAAA+TGG - chr6_3:98443193-98443212 None:intergenic 25.0%
! ATGCAAGCCAATAAAATATA+TGG + chr6_3:98443349-98443368 Msa0968210:intron 25.0%
! TGCAAGCCAATAAAATATAT+GGG + chr6_3:98443350-98443369 Msa0968210:intron 25.0%
! TGTTAAGTGAAGATAAAGAA+TGG + chr6_3:98443497-98443516 Msa0968210:intron 25.0%
! AGATAGATAGGAAAGAAAAT+GGG - chr6_3:98443661-98443680 None:intergenic 25.0%
!!! ACCAATAATATTTTAGAGTG+GGG - chr6_3:98443759-98443778 None:intergenic 25.0%
!!! CACCAATAATATTTTAGAGT+GGG - chr6_3:98443760-98443779 None:intergenic 25.0%
!!! ACACCAATAATATTTTAGAG+TGG - chr6_3:98443761-98443780 None:intergenic 25.0%
! ATCTCATTAACAAAAAAGAG+GGG - chr6_3:98444077-98444096 None:intergenic 25.0%
! CAATCTCATTAACAAAAAAG+AGG - chr6_3:98444079-98444098 None:intergenic 25.0%
!!! CTCTTTTTTGTTAATGAGAT+TGG + chr6_3:98444077-98444096 Msa0968210:three_prime_UTR 25.0%
! TAATGAGATTGGATTTAATC+AGG + chr6_3:98444088-98444107 Msa0968210:three_prime_UTR 25.0%
! AATTACAAAACTATTCGGTT+GGG + chr6_3:98444134-98444153 Msa0968210:three_prime_UTR 25.0%
! AAGTGTATTCCAATAGTTAT+AGG - chr6_3:98444233-98444252 None:intergenic 25.0%
! AAAAATGACGTATAATCATG+AGG - chr6_3:98444256-98444275 None:intergenic 25.0%
GAATAACAAGAAGAAGAAGA+AGG - chr6_3:98435120-98435139 None:intergenic 30.0%
!! TTCTTCTTCTTGTTATTCTC+TGG + chr6_3:98435122-98435141 Msa0968210:five_prime_UTR 30.0%
!! TCTTCTTCTTGTTATTCTCT+GGG + chr6_3:98435123-98435142 Msa0968210:five_prime_UTR 30.0%
AATACTACAGAAACGAGAAT+TGG - chr6_3:98435363-98435382 None:intergenic 30.0%
!!! GTGTATAGATCTTTTAGCTT+TGG + chr6_3:98435703-98435722 Msa0968210:intron 30.0%
! AGGTTTTTATCTTCAGCTAA+AGG + chr6_3:98435881-98435900 Msa0968210:intron 30.0%
CAGCATCAAAATTCAAATTC+TGG - chr6_3:98435947-98435966 None:intergenic 30.0%
! TTTTGCCATCTCTAATTTCT+AGG + chr6_3:98435973-98435992 Msa0968210:intron 30.0%
TAAATCTTCGTGCTTATTTG+TGG + chr6_3:98436048-98436067 Msa0968210:intron 30.0%
! CTTTTCCAGTCTAAAGATAT+GGG + chr6_3:98436166-98436185 Msa0968210:CDS 30.0%
TTAATCCCATATCTTTAGAC+TGG - chr6_3:98436174-98436193 None:intergenic 30.0%
AGTCTAAAGATATGGGATTA+AGG + chr6_3:98436173-98436192 Msa0968210:CDS 30.0%
AATGGTGTATCTGATGATAA+AGG + chr6_3:98436198-98436217 Msa0968210:CDS 30.0%
ATCCTGAAATTGTAAAAAGG+TGG + chr6_3:98436651-98436670 Msa0968210:CDS 30.0%
! GGTCTCTTTTGCTTATAATT+TGG - chr6_3:98437058-98437077 None:intergenic 30.0%
GAATTAAGTAGGTCAAAAGT+GGG - chr6_3:98437079-98437098 None:intergenic 30.0%
AGAATTAAGTAGGTCAAAAG+TGG - chr6_3:98437080-98437099 None:intergenic 30.0%
TAACACTACATATGCTTCTA+TGG + chr6_3:98437268-98437287 Msa0968210:intron 30.0%
GAAGCATAATTATACCTCTA+CGG - chr6_3:98437301-98437320 None:intergenic 30.0%
ATCTTAAAGAAGGGTAGTTT+AGG + chr6_3:98437338-98437357 Msa0968210:intron 30.0%
! AGGAAGCCTAGTTATATTTT+TGG + chr6_3:98437358-98437377 Msa0968210:intron 30.0%
!!! TTGTATCATGCTGACTTTTA+TGG + chr6_3:98437482-98437501 Msa0968210:intron 30.0%
TGTCATTGCATTAAGAATGT+GGG - chr6_3:98437664-98437683 None:intergenic 30.0%
TTGTCATTGCATTAAGAATG+TGG - chr6_3:98437665-98437684 None:intergenic 30.0%
! TCAACCATCTTTTCTACAAT+GGG - chr6_3:98437714-98437733 None:intergenic 30.0%
! TTCAACCATCTTTTCTACAA+TGG - chr6_3:98437715-98437734 None:intergenic 30.0%
TTCCTCTACATCTAACAATT+AGG - chr6_3:98437825-98437844 None:intergenic 30.0%
TAATTGTTAGATGTAGAGGA+AGG + chr6_3:98437824-98437843 Msa0968210:intron 30.0%
AGAATTAGAGGTTAATGGTT+TGG + chr6_3:98437878-98437897 Msa0968210:intron 30.0%
CAACTCCAGTAATTTATAAG+TGG + chr6_3:98438066-98438085 Msa0968210:intron 30.0%
AGGAACCACTTATAAATTAC+TGG - chr6_3:98438074-98438093 None:intergenic 30.0%
! TTATAAGTGGTTCCTTTTCA+AGG + chr6_3:98438079-98438098 Msa0968210:intron 30.0%
TAAAAAGGGTTTGTGGTATT+TGG + chr6_3:98438398-98438417 Msa0968210:intron 30.0%
TCTCAAGAAAATCATAGAAG+GGG - chr6_3:98438666-98438685 None:intergenic 30.0%
CTCTCAAGAAAATCATAGAA+GGG - chr6_3:98438667-98438686 None:intergenic 30.0%
ACTCTCAAGAAAATCATAGA+AGG - chr6_3:98438668-98438687 None:intergenic 30.0%
! TAGCAGAAGTGATTTTTAAC+AGG + chr6_3:98438883-98438902 Msa0968210:intron 30.0%
!! ATTACTACACTTTTGAAGAC+AGG + chr6_3:98439129-98439148 Msa0968210:CDS 30.0%
!!! AATCTTTTTTCCTTAACGAG+TGG + chr6_3:98439338-98439357 Msa0968210:intron 30.0%
ATTTCCTGAGTAACATTCTT+AGG + chr6_3:98439403-98439422 Msa0968210:CDS 30.0%
TTTCCTGAGTAACATTCTTA+GGG + chr6_3:98439404-98439423 Msa0968210:CDS 30.0%
! CAGTTTGTTCATATTTCTTC+TGG + chr6_3:98439599-98439618 Msa0968210:intron 30.0%
!!! GTTACTAGTTTTTCAGACAA+AGG - chr6_3:98440147-98440166 None:intergenic 30.0%
TCCAAGTGTGTTTAGATAAA+GGG - chr6_3:98440321-98440340 None:intergenic 30.0%
CATGTGTTTGATATGATTAC+AGG + chr6_3:98440490-98440509 Msa0968210:intron 30.0%
!! AAACTTTGGGAACCTTTTTA+AGG + chr6_3:98440688-98440707 Msa0968210:CDS 30.0%
CAAGTGTATGAACCTTAAAA+AGG - chr6_3:98440703-98440722 None:intergenic 30.0%
ACATGTTCTAATAATTGCTC+TGG - chr6_3:98440924-98440943 None:intergenic 30.0%
TCATAAAACAATCCAAATCC+AGG + chr6_3:98440970-98440989 Msa0968210:intron 30.0%
TTAGAAAATTTCCCAAGTGT+TGG - chr6_3:98441154-98441173 None:intergenic 30.0%
TGTAAAATCTCGGCATAAAT+TGG + chr6_3:98441268-98441287 Msa0968210:intron 30.0%
TATCTAATTTCAGGAATGCA+TGG + chr6_3:98441402-98441421 Msa0968210:CDS 30.0%
ATCTAATTTCAGGAATGCAT+GGG + chr6_3:98441403-98441422 Msa0968210:CDS 30.0%
ATGTCTGTGTTTGTGTAAAA+TGG + chr6_3:98441602-98441621 Msa0968210:intron 30.0%
AATATGGTTTATCATGGTGA+GGG - chr6_3:98441673-98441692 None:intergenic 30.0%
AAATATGGTTTATCATGGTG+AGG - chr6_3:98441674-98441693 None:intergenic 30.0%
TATGCAGATAAATACTGACA+GGG + chr6_3:98442192-98442211 Msa0968210:intron 30.0%
! TTTAGACCTCTAAAGATGTT+TGG - chr6_3:98442222-98442241 None:intergenic 30.0%
! TGGTTTTTGATAGAACACTA+TGG + chr6_3:98442342-98442361 Msa0968210:intron 30.0%
AAAGATTTGATCCTAAGTCA+AGG + chr6_3:98442421-98442440 Msa0968210:intron 30.0%
AAATAGAATAAGACGATCAC+AGG - chr6_3:98442636-98442655 None:intergenic 30.0%
! TCCATTACAGATTAGTTGTT+TGG + chr6_3:98442707-98442726 Msa0968210:intron 30.0%
TCCAAACAACTAATCTGTAA+TGG - chr6_3:98442711-98442730 None:intergenic 30.0%
CAATATGATATCCAAGAGAT+TGG + chr6_3:98442785-98442804 Msa0968210:intron 30.0%
! GTTCATTTTATTGTAGTTCC+CGG - chr6_3:98442813-98442832 None:intergenic 30.0%
CAATAAAATGAACGCAAGAA+AGG + chr6_3:98442820-98442839 Msa0968210:intron 30.0%
CATGAAGAAATCTGACAATT+AGG - chr6_3:98442933-98442952 None:intergenic 30.0%
CTAATTGTCAGATTTCTTCA+TGG + chr6_3:98442931-98442950 Msa0968210:intron 30.0%
AATACCCTAATCTTTCTTTG+GGG - chr6_3:98442966-98442985 None:intergenic 30.0%
CAATACCCTAATCTTTCTTT+GGG - chr6_3:98442967-98442986 None:intergenic 30.0%
ACAATACCCTAATCTTTCTT+TGG - chr6_3:98442968-98442987 None:intergenic 30.0%
!! AAAGAAAGATTAGGGTATTG+TGG + chr6_3:98442967-98442986 Msa0968210:intron 30.0%
! CGTTTTTCCAAAGATTATTG+GGG - chr6_3:98443111-98443130 None:intergenic 30.0%
! AATTCCTCATCATTCCATTT+TGG + chr6_3:98443176-98443195 Msa0968210:intron 30.0%
AAATCCAAAATGGAATGATG+AGG - chr6_3:98443183-98443202 None:intergenic 30.0%
CATCTCAGAAAAGAAAACTA+AGG + chr6_3:98443316-98443335 Msa0968210:intron 30.0%
ATGGGACTAAAAAAACATCA+AGG + chr6_3:98443368-98443387 Msa0968210:intron 30.0%
GAGATAGATAGGAAAGAAAA+TGG - chr6_3:98443662-98443681 None:intergenic 30.0%
!! TCCCCACTCTAAAATATTAT+TGG + chr6_3:98443755-98443774 Msa0968210:intron 30.0%
CTTTCAGTTATTCACTGTTA+TGG + chr6_3:98443784-98443803 Msa0968210:intron 30.0%
AATTTCATTGCAACATCCTT+TGG - chr6_3:98443957-98443976 None:intergenic 30.0%
GAATTACAAAACTATTCGGT+TGG + chr6_3:98444133-98444152 Msa0968210:three_prime_UTR 30.0%
! GATACTGGAAGTATAATGTT+GGG + chr6_3:98444207-98444226 Msa0968210:three_prime_UTR 30.0%
AAAAATGACGACACAAACAT+TGG - chr6_3:98444320-98444339 None:intergenic 30.0%
!! TTGATAGTGTATCTGATCGA+AGG + chr6_3:98435489-98435508 Msa0968210:intron 35.0%
ACTATCAACTCATCACTAGA+AGG - chr6_3:98435685-98435704 None:intergenic 35.0%
! CTTTTCAATTCCCATGAAAG+GGG - chr6_3:98435797-98435816 None:intergenic 35.0%
! CCTTTTCAATTCCCATGAAA+GGG - chr6_3:98435798-98435817 None:intergenic 35.0%
CCTTTCATGGGAATTGAAAA+GGG + chr6_3:98435796-98435815 Msa0968210:CDS 35.0%
CTTTCATGGGAATTGAAAAG+GGG + chr6_3:98435797-98435816 Msa0968210:CDS 35.0%
TTTCATGGGAATTGAAAAGG+GGG + chr6_3:98435798-98435817 Msa0968210:CDS 35.0%
ATGATCCACAATTAGATGCT+AGG + chr6_3:98435848-98435867 Msa0968210:CDS 35.0%
AAAGAAAACTTCTGTGGCTT+CGG - chr6_3:98436134-98436153 None:intergenic 35.0%
! GCTTTTCCAGTCTAAAGATA+TGG + chr6_3:98436165-98436184 Msa0968210:CDS 35.0%
AGATATGGGATTAAGGAGAA+TGG + chr6_3:98436180-98436199 Msa0968210:CDS 35.0%
AATAAGCATGTCGCATACAT+GGG - chr6_3:98436608-98436627 None:intergenic 35.0%
AAATAAGCATGTCGCATACA+TGG - chr6_3:98436609-98436628 None:intergenic 35.0%
TCAGGATTTGTCTGTAAAGA+GGG - chr6_3:98436638-98436657 None:intergenic 35.0%
TTCAGGATTTGTCTGTAAAG+AGG - chr6_3:98436639-98436658 None:intergenic 35.0%
! CTCCACCTTTTTACAATTTC+AGG - chr6_3:98436656-98436675 None:intergenic 35.0%
! TTTTGTACAGTTTCATGCAC+TGG + chr6_3:98436712-98436731 Msa0968210:CDS 35.0%
TTTGTACAGTTTCATGCACT+GGG + chr6_3:98436713-98436732 Msa0968210:CDS 35.0%
TTCTTATAAATTGGGACGGA+GGG - chr6_3:98437018-98437037 None:intergenic 35.0%
TTTCTTATAAATTGGGACGG+AGG - chr6_3:98437019-98437038 None:intergenic 35.0%
!!! AAATTGCATGGGGGTATTTT+TGG - chr6_3:98437109-98437128 None:intergenic 35.0%
TCGGCAAATGTATAAACATG+TGG - chr6_3:98437143-98437162 None:intergenic 35.0%
TCTATGGAATTAAACCGTAG+AGG + chr6_3:98437284-98437303 Msa0968210:intron 35.0%
AGATGGTTGAATCTCGATTT+AGG + chr6_3:98437724-98437743 Msa0968210:intron 35.0%
AGCCTAATTGTTAGATGTAG+AGG + chr6_3:98437820-98437839 Msa0968210:intron 35.0%
GGTTTGGATATAGACATACA+TGG + chr6_3:98437894-98437913 Msa0968210:intron 35.0%
ATCATAAAACATGTCCCACT+AGG - chr6_3:98437968-98437987 None:intergenic 35.0%
TGATAATCAATGTAGGTCCT+AGG - chr6_3:98438155-98438174 None:intergenic 35.0%
ACAGCGATGATAATCAATGT+AGG - chr6_3:98438162-98438181 None:intergenic 35.0%
! AAAAAAGAAGGCCTTTGAGA+AGG - chr6_3:98438336-98438355 None:intergenic 35.0%
GTGTATTATTTCCTGACTCA+CGG - chr6_3:98438630-98438649 None:intergenic 35.0%
TCAGGAAATAATACACAGTC+AGG + chr6_3:98438634-98438653 Msa0968210:CDS 35.0%
CAGGAAATAATACACAGTCA+GGG + chr6_3:98438635-98438654 Msa0968210:CDS 35.0%
AGGAAATAATACACAGTCAG+GGG + chr6_3:98438636-98438655 Msa0968210:CDS 35.0%
ACAGCAGCAAATCTTAAAAC+TGG - chr6_3:98438820-98438839 None:intergenic 35.0%
ACAAAGCTCAAGTTTAACCA+AGG - chr6_3:98438982-98439001 None:intergenic 35.0%
CACTAACTGCAACATTGATA+TGG + chr6_3:98439062-98439081 Msa0968210:CDS 35.0%
AAGTGTAGTAATAGCAAGTG+TGG - chr6_3:98439121-98439140 None:intergenic 35.0%
AGTAACATTCTTAGGGAAGA+AGG + chr6_3:98439411-98439430 Msa0968210:CDS 35.0%
TGTAGTATCTATGGTTCAAG+GGG - chr6_3:98439656-98439675 None:intergenic 35.0%
GTGTAGTATCTATGGTTCAA+GGG - chr6_3:98439657-98439676 None:intergenic 35.0%
AGTGTAGTATCTATGGTTCA+AGG - chr6_3:98439658-98439677 None:intergenic 35.0%
CTTAGCAAAACAAATATGCG+CGG - chr6_3:98439943-98439962 None:intergenic 35.0%
!! TCTTTTTGACAGTGATGATG+AGG + chr6_3:98439969-98439988 Msa0968210:CDS 35.0%
AGAAAATCATCTTCTTTCGG+CGG - chr6_3:98440215-98440234 None:intergenic 35.0%
ACCCTTTATCTAAACACACT+TGG + chr6_3:98440317-98440336 Msa0968210:CDS 35.0%
CTCCAAGTGTGTTTAGATAA+AGG - chr6_3:98440322-98440341 None:intergenic 35.0%
CTTTATCTAAACACACTTGG+AGG + chr6_3:98440320-98440339 Msa0968210:CDS 35.0%
TGAGACTGATAAAGCTGTAA+AGG + chr6_3:98440358-98440377 Msa0968210:CDS 35.0%
! AAAGTTTGCAAACTCTGGAA+TGG - chr6_3:98440675-98440694 None:intergenic 35.0%
ATTCCAGAGTTTGCAAACTT+TGG + chr6_3:98440674-98440693 Msa0968210:CDS 35.0%
TTCCAGAGTTTGCAAACTTT+GGG + chr6_3:98440675-98440694 Msa0968210:CDS 35.0%
TTACAAACAAGACCTGGATT+TGG - chr6_3:98440985-98441004 None:intergenic 35.0%
CAATTACGATAACCTGAACA+AGG - chr6_3:98441018-98441037 None:intergenic 35.0%
! TGTTCAGGTTATCGTAATTG+TGG + chr6_3:98441018-98441037 Msa0968210:intron 35.0%
! TCTGAAGTTTATTGTTCGAG+AGG + chr6_3:98441177-98441196 Msa0968210:CDS 35.0%
! TCGGCATAAATTGGATTTTC+AGG + chr6_3:98441277-98441296 Msa0968210:intron 35.0%
AGCAGATTACACATTGAAAG+TGG + chr6_3:98441376-98441395 Msa0968210:CDS 35.0%
GCAGATTACACATTGAAAGT+GGG + chr6_3:98441377-98441396 Msa0968210:CDS 35.0%
CAGATTACACATTGAAAGTG+GGG + chr6_3:98441378-98441397 Msa0968210:CDS 35.0%
AGATTACACATTGAAAGTGG+GGG + chr6_3:98441379-98441398 Msa0968210:CDS 35.0%
GATGACAGTATTTACAGCTT+CGG - chr6_3:98441492-98441511 None:intergenic 35.0%
AATACTGTCATCAACCTTCT+TGG + chr6_3:98441500-98441519 Msa0968210:CDS 35.0%
ACGAAGAGTTCAAAAGAAAC+AGG - chr6_3:98441559-98441578 None:intergenic 35.0%
GTTTGTGTAAAATGGTTGTG+AGG + chr6_3:98441610-98441629 Msa0968210:intron 35.0%
TTACTGTAGCATAGTTACTG+TGG + chr6_3:98441736-98441755 Msa0968210:intron 35.0%
ATGAAAACATACACCCAAAG+TGG + chr6_3:98441853-98441872 Msa0968210:intron 35.0%
TGAAAACATACACCCAAAGT+GGG + chr6_3:98441854-98441873 Msa0968210:intron 35.0%
TGTTTGAGAAAACCCACTTT+GGG - chr6_3:98441869-98441888 None:intergenic 35.0%
ATGTTTGAGAAAACCCACTT+TGG - chr6_3:98441870-98441889 None:intergenic 35.0%
! AGAGTGTTTAGTTCAACAGA+GGG + chr6_3:98441957-98441976 Msa0968210:intron 35.0%
GATATAACCCTCTCTTTGTT+TGG + chr6_3:98441986-98442005 Msa0968210:intron 35.0%
TGACAAACCAAACAAAGAGA+GGG - chr6_3:98441996-98442015 None:intergenic 35.0%
!! TCTCTTTGTTTGGTTTGTCA+GGG + chr6_3:98441996-98442015 Msa0968210:intron 35.0%
GTATGCAGATAAATACTGAC+AGG + chr6_3:98442191-98442210 Msa0968210:intron 35.0%
GGCCTCAAGAAAATTCAATT+TGG - chr6_3:98442516-98442535 None:intergenic 35.0%
!!! GGTTTTAGACTGCAAACTTA+TGG - chr6_3:98442549-98442568 None:intergenic 35.0%
AAGTCAGCAAGTTCAAAAGA+TGG + chr6_3:98442665-98442684 Msa0968210:intron 35.0%
! TTTGAGACCCCAATAATCTT+TGG + chr6_3:98443101-98443120 Msa0968210:intron 35.0%
GAGGAATTGCTTCAACTTAA+TGG - chr6_3:98443164-98443183 None:intergenic 35.0%
AAACTGGTTGCAGAATGTAT+AGG - chr6_3:98443231-98443250 None:intergenic 35.0%
TATACATTCTGCAACCAGTT+TGG + chr6_3:98443230-98443249 Msa0968210:intron 35.0%
GGTAAATGAGTGCAGTATTT+AGG + chr6_3:98443251-98443270 Msa0968210:intron 35.0%
! TGAGTGCAGTATTTAGGATT+AGG + chr6_3:98443257-98443276 Msa0968210:intron 35.0%
!! TTTTGTCACTTGGATTGTTC+TGG - chr6_3:98443292-98443311 None:intergenic 35.0%
! GAGATGTTCATTTTGTCACT+TGG - chr6_3:98443302-98443321 None:intergenic 35.0%
ATTTGTGAAGATGCAAGAAG+AGG + chr6_3:98443528-98443547 Msa0968210:intron 35.0%
TACAGTAGGAAATTGTGTCA+TGG + chr6_3:98443561-98443580 Msa0968210:intron 35.0%
ATGTTGGAGAAGAGATAGAT+AGG - chr6_3:98443673-98443692 None:intergenic 35.0%
ATCTATCTCTTCTCCAACAT+TGG + chr6_3:98443673-98443692 Msa0968210:intron 35.0%
CATGTGTGTGATCTTGAATT+GGG - chr6_3:98443867-98443886 None:intergenic 35.0%
ACATGTGTGTGATCTTGAAT+TGG - chr6_3:98443868-98443887 None:intergenic 35.0%
!! ATCACACACATGTTTGTTGT+CGG + chr6_3:98443875-98443894 Msa0968210:CDS 35.0%
!! GAAATATAAAGGTGCTTGTG+CGG + chr6_3:98443910-98443929 Msa0968210:CDS 35.0%
! CGATACTGGAAGTATAATGT+TGG + chr6_3:98444206-98444225 Msa0968210:three_prime_UTR 35.0%
AATGTTGGGCCTATAACTAT+TGG + chr6_3:98444221-98444240 Msa0968210:three_prime_UTR 35.0%
AATGAATGCACAACTCACTC+GGG - chr6_3:98435167-98435186 None:intergenic 40.0%
GAATGAATGCACAACTCACT+CGG - chr6_3:98435168-98435187 None:intergenic 40.0%
TCATCATCTTTCTTCACGAG+TGG - chr6_3:98435235-98435254 None:intergenic 40.0%
TTGGAAACGAAACATGGATC+TGG - chr6_3:98435344-98435363 None:intergenic 40.0%
CGAGAATTGGAAACGAAACA+TGG - chr6_3:98435350-98435369 None:intergenic 40.0%
AGTCAGTATTCGTGCTTCAT+AGG + chr6_3:98435522-98435541 Msa0968210:intron 40.0%
CCCTTTCATGGGAATTGAAA+AGG + chr6_3:98435795-98435814 Msa0968210:CDS 40.0%
! CCCTTTTCAATTCCCATGAA+AGG - chr6_3:98435799-98435818 None:intergenic 40.0%
CATCTCCTAGCATCTAATTG+TGG - chr6_3:98435856-98435875 None:intergenic 40.0%
CTGCTATACCTACTGAATCA+GGG + chr6_3:98436007-98436026 Msa0968210:CDS 40.0%
! TCAGGGAGAGACTTTTACAA+AGG + chr6_3:98436024-98436043 Msa0968210:CDS 40.0%
GACAGCAAAGAAAACTTCTG+TGG - chr6_3:98436140-98436159 None:intergenic 40.0%
TGTCACAAGCTCTCTTATGA+AGG + chr6_3:98436365-98436384 Msa0968210:CDS 40.0%
! TAGATGAATGCCACTGACTA+AGG - chr6_3:98436532-98436551 None:intergenic 40.0%
ATAAGCATGTCGCATACATG+GGG - chr6_3:98436607-98436626 None:intergenic 40.0%
TGTAAAAAGGTGGAGCAATG+AGG + chr6_3:98436661-98436680 Msa0968210:CDS 40.0%
GTGAATTATAGTTCGCTTGC+TGG + chr6_3:98436796-98436815 Msa0968210:intron 40.0%
TTGCTTATAAATTGGGACGG+AGG + chr6_3:98437447-98437466 Msa0968210:intron 40.0%
TGCTTATAAATTGGGACGGA+GGG + chr6_3:98437448-98437467 Msa0968210:intron 40.0%
TTACTATCTCTCCATCCACT+CGG + chr6_3:98437509-98437528 Msa0968210:intron 40.0%
! CATTGATTGTGGGGTATTTC+TGG - chr6_3:98437535-98437554 None:intergenic 40.0%
CAGAAATACCCCACAATCAA+TGG + chr6_3:98437533-98437552 Msa0968210:intron 40.0%
GTTTGCAAGTCTAAGAAGTC+AGG - chr6_3:98437572-98437591 None:intergenic 40.0%
AGCACCCATTGTAGAAAAGA+TGG + chr6_3:98437707-98437726 Msa0968210:intron 40.0%
TGGTTGAATCTCGATTTAGG+TGG + chr6_3:98437727-98437746 Msa0968210:intron 40.0%
GATCGGCTACATAGATCAAA+CGG - chr6_3:98437942-98437961 None:intergenic 40.0%
ATCAACTCTCTGCCTTGAAA+AGG - chr6_3:98438094-98438113 None:intergenic 40.0%
! GCGAAGTTTTTATCTCACCT+AGG + chr6_3:98438135-98438154 Msa0968210:intron 40.0%
TGCAGATACGACAGAATGAT+CGG + chr6_3:98438433-98438452 Msa0968210:intron 40.0%
GACTTGTGTAACGAATCAAC+AGG - chr6_3:98438524-98438543 None:intergenic 40.0%
!! GTTGATTCGTTACACAAGTC+AGG + chr6_3:98438524-98438543 Msa0968210:CDS 40.0%
TCCTTTCACGTGAATCTTGT+TGG + chr6_3:98438554-98438573 Msa0968210:intron 40.0%
TCCAACAAGATTCACGTGAA+AGG - chr6_3:98438558-98438577 None:intergenic 40.0%
CAAGAAAATCATAGAAGGGG+CGG - chr6_3:98438663-98438682 None:intergenic 40.0%
ATTGAGCTCTGTAATAGCTC+TGG - chr6_3:98438731-98438750 None:intergenic 40.0%
AGAGCTATTACAGAGCTCAA+TGG + chr6_3:98438730-98438749 Msa0968210:CDS 40.0%
AGCTGAAGAACAGTAATTGC+TGG - chr6_3:98438778-98438797 None:intergenic 40.0%
ACAAAGGCTTACCTTGTTCA+AGG - chr6_3:98438848-98438867 None:intergenic 40.0%
TGCAGTTAGTGACTGATGTT+GGG - chr6_3:98439053-98439072 None:intergenic 40.0%
TTGCAGTTAGTGACTGATGT+TGG - chr6_3:98439054-98439073 None:intergenic 40.0%
GACAGGAAATGAATCAAGTG+TGG + chr6_3:98439146-98439165 Msa0968210:CDS 40.0%
TCTGTATGTGTGCTGTACTA+CGG + chr6_3:98439284-98439303 Msa0968210:intron 40.0%
CTTCCCTAAGAATGTTACTC+AGG - chr6_3:98439410-98439429 None:intergenic 40.0%
AACATTCTTAGGGAAGAAGG+TGG + chr6_3:98439414-98439433 Msa0968210:CDS 40.0%
!!! AGGTGGTTTTGAGTACAAGA+AGG + chr6_3:98439431-98439450 Msa0968210:CDS 40.0%
TAGAGAAATCCCTGATGCAA+AGG + chr6_3:98439482-98439501 Msa0968210:CDS 40.0%
! CTACGCAGGTATTTCTTTTG+CGG + chr6_3:98439562-98439581 Msa0968210:intron 40.0%
ACCATAGATACTACACTTCC+TGG + chr6_3:98439661-98439680 Msa0968210:intron 40.0%
CCATAGATACTACACTTCCT+GGG + chr6_3:98439662-98439681 Msa0968210:intron 40.0%
TACACTTCCTGGGAATTGAA+GGG + chr6_3:98439672-98439691 Msa0968210:CDS 40.0%
! TTGCTAGGGTCTGATGTTTT+TGG - chr6_3:98439698-98439717 None:intergenic 40.0%
!! TGCTGCAGTTGATGAGTTAA+AGG + chr6_3:98439802-98439821 Msa0968210:CDS 40.0%
!!! CGCGCATATTTGTTTTGCTA+AGG + chr6_3:98439941-98439960 Msa0968210:CDS 40.0%
CTGTAAAGGACTTCCTGTTT+GGG + chr6_3:98440372-98440391 Msa0968210:CDS 40.0%
TTGACAAGCGGGATATCAAA+TGG - chr6_3:98440398-98440417 None:intergenic 40.0%
ATGTCAAAAGCCTCTTCTGA+AGG - chr6_3:98440518-98440537 None:intergenic 40.0%
TTTCTTCTCTGCAAGTGGTT+GGG - chr6_3:98440567-98440586 None:intergenic 40.0%
TGGTAAAAAGCCAACTGGTT+TGG + chr6_3:98440592-98440611 Msa0968210:CDS 40.0%
! GGTAAAAAGCCAACTGGTTT+GGG + chr6_3:98440593-98440612 Msa0968210:CDS 40.0%
ATATGCATCAGCTGTTGATG+GGG - chr6_3:98440636-98440655 None:intergenic 40.0%
GATATGCATCAGCTGTTGAT+GGG - chr6_3:98440637-98440656 None:intergenic 40.0%
TGATATGCATCAGCTGTTGA+TGG - chr6_3:98440638-98440657 None:intergenic 40.0%
TTCCCAAAGTTTGCAAACTC+TGG - chr6_3:98440680-98440699 None:intergenic 40.0%
! AGAAGCAGATGAGTTTTCAG+AGG + chr6_3:98441048-98441067 Msa0968210:CDS 40.0%
TCATATGGAAGAGACTTGAG+AGG - chr6_3:98441085-98441104 None:intergenic 40.0%
TCTCTTCCATATGATTCACC+TGG + chr6_3:98441091-98441110 Msa0968210:CDS 40.0%
ATCTGTCCAGGTGAATCATA+TGG - chr6_3:98441100-98441119 None:intergenic 40.0%
! TTCACCTGGACAGATTTTTG+TGG + chr6_3:98441105-98441124 Msa0968210:CDS 40.0%
AATGCCACAAAAATCTGTCC+AGG - chr6_3:98441112-98441131 None:intergenic 40.0%
TACTCGTCCCCTCTATTTAT+GGG + chr6_3:98441200-98441219 Msa0968210:intron 40.0%
TGAAGATGAATACCAGCTAG+AGG + chr6_3:98441337-98441356 Msa0968210:CDS 40.0%
!! AAGTGGGGGTATCTAATTTC+AGG + chr6_3:98441393-98441412 Msa0968210:CDS 40.0%
AAAGAAACAGGTAACACCAC+TGG - chr6_3:98441547-98441566 None:intergenic 40.0%
! GGCATTGGGTAATTAACAAG+AGG - chr6_3:98441652-98441671 None:intergenic 40.0%
!! TTTATCATGGTGAGGGCATT+GGG - chr6_3:98441666-98441685 None:intergenic 40.0%
TGTAGCATAGTTACTGTGGT+GGG + chr6_3:98441740-98441759 Msa0968210:intron 40.0%
! CAGAGTGTTTAGTTCAACAG+AGG + chr6_3:98441956-98441975 Msa0968210:intron 40.0%
! GAGTGTTTAGTTCAACAGAG+GGG + chr6_3:98441958-98441977 Msa0968210:intron 40.0%
! TTTAGTTCAACAGAGGGGAA+GGG + chr6_3:98441963-98441982 Msa0968210:intron 40.0%
CTGACAAACCAAACAAAGAG+AGG - chr6_3:98441997-98442016 None:intergenic 40.0%
!! CTCTCTTTGTTTGGTTTGTC+AGG + chr6_3:98441995-98442014 Msa0968210:intron 40.0%
!! CTCTTTGTTTGGTTTGTCAG+GGG + chr6_3:98441997-98442016 Msa0968210:intron 40.0%
GGTATTACACTGGTAGAACA+GGG - chr6_3:98442067-98442086 None:intergenic 40.0%
TGGTATTACACTGGTAGAAC+AGG - chr6_3:98442068-98442087 None:intergenic 40.0%
TGATCAATAACAGCTGTCAG+AGG - chr6_3:98442095-98442114 None:intergenic 40.0%
! TAATGTTTTGTACTCAGGGC+CGG - chr6_3:98442590-98442609 None:intergenic 40.0%
TAAGACGATCACAGGTATGT+AGG - chr6_3:98442628-98442647 None:intergenic 40.0%
AGCAAGTTCAAAAGATGGTG+AGG + chr6_3:98442670-98442689 Msa0968210:intron 40.0%
GCAAGTTCAAAAGATGGTGA+GGG + chr6_3:98442671-98442690 Msa0968210:intron 40.0%
TAGTTGTTTGGATGTGTTGC+TGG + chr6_3:98442719-98442738 Msa0968210:intron 40.0%
GACTGATGTATTTGTCAAGC+AGG - chr6_3:98442748-98442767 None:intergenic 40.0%
GATATCCAAGAGATTGGATC+CGG + chr6_3:98442791-98442810 Msa0968210:intron 40.0%
ATATCCAAGAGATTGGATCC+GGG + chr6_3:98442792-98442811 Msa0968210:intron 40.0%
AATGAACGCAAGAAAGGAAC+AGG + chr6_3:98442826-98442845 Msa0968210:intron 40.0%
ATTTACTAGTGCCTGCATGT+TGG + chr6_3:98442860-98442879 Msa0968210:intron 40.0%
TTTACTAGTGCCTGCATGTT+GGG + chr6_3:98442861-98442880 Msa0968210:intron 40.0%
AATGGTTATACCCAACATGC+AGG - chr6_3:98442874-98442893 None:intergenic 40.0%
AGATTTCTTCATGGTCCAAC+AGG + chr6_3:98442940-98442959 Msa0968210:intron 40.0%
!! TTAGGGTATTGTGGCTTACT+CGG + chr6_3:98442976-98442995 Msa0968210:intron 40.0%
ACTGCACTCATTTACCAAAC+TGG - chr6_3:98443247-98443266 None:intergenic 40.0%
!!! TTTTAGAGTGGGGAGAGAAA+TGG - chr6_3:98443749-98443768 None:intergenic 40.0%
!! TTTTTATTTGTGGGCTGTGC+AGG + chr6_3:98443824-98443843 Msa0968210:intron 40.0%
!! TTTTATTTGTGGGCTGTGCA+GGG + chr6_3:98443825-98443844 Msa0968210:intron 40.0%
!! TCACACACATGTTTGTTGTC+GGG + chr6_3:98443876-98443895 Msa0968210:CDS 40.0%
TTGTTGTCGGGTGTATTCAT+AGG + chr6_3:98443888-98443907 Msa0968210:CDS 40.0%
ATCACTGACAGTTTCATCCT+CGG - chr6_3:98443991-98444010 None:intergenic 40.0%
TGATGCCATTCATGAGATTG+TGG + chr6_3:98444007-98444026 Msa0968210:CDS 40.0%
ATTCATGAGATTGTGGCTAG+CGG + chr6_3:98444014-98444033 Msa0968210:CDS 40.0%
TTTGTCCCTTACTGCATTCT+TGG + chr6_3:98444172-98444191 Msa0968210:three_prime_UTR 40.0%
GTCTACCAAGAATGCAGTAA+GGG - chr6_3:98444180-98444199 None:intergenic 40.0%
AGTCTACCAAGAATGCAGTA+AGG - chr6_3:98444181-98444200 None:intergenic 40.0%
ATCACGGTAGCTGAATCTCA+GGG - chr6_3:98435205-98435224 None:intergenic 45.0%
GAGAAAAACCTTCATCGTCG+CGG - chr6_3:98435258-98435277 None:intergenic 45.0%
AGCTGAGTATTCCCCTTTCA+TGG + chr6_3:98435783-98435802 Msa0968210:intron 45.0%
GCTGAGTATTCCCCTTTCAT+GGG + chr6_3:98435784-98435803 Msa0968210:intron 45.0%
GCTGCTATACCTACTGAATC+AGG + chr6_3:98436006-98436025 Msa0968210:CDS 45.0%
AAGTCTCTCCCTGATTCAGT+AGG - chr6_3:98436018-98436037 None:intergenic 45.0%
AATACCGCTCAATTTGTGCC+AGG - chr6_3:98436464-98436483 None:intergenic 45.0%
CAGTGGCATTCATCTACTAC+AGG + chr6_3:98436536-98436555 Msa0968210:CDS 45.0%
AACCAATCTTGCAGCATACC+TGG - chr6_3:98436748-98436767 None:intergenic 45.0%
! GGTATGCTGCAAGATTGGTT+TGG + chr6_3:98436748-98436767 Msa0968210:intron 45.0%
!! GTTCGCTTGCTGGCTTATAT+CGG + chr6_3:98436806-98436825 Msa0968210:intron 45.0%
ATGTTCAGCACGAGCTAATC+AGG + chr6_3:98436873-98436892 Msa0968210:intron 45.0%
! ACGGAGGGAGTACAATACAT+AGG - chr6_3:98437003-98437022 None:intergenic 45.0%
! TACCCCACAATCAATGGACT+AGG + chr6_3:98437539-98437558 Msa0968210:intron 45.0%
!! ACCCCACAATCAATGGACTA+GGG + chr6_3:98437540-98437559 Msa0968210:intron 45.0%
! ACCCCTAGTCCATTGATTGT+GGG - chr6_3:98437545-98437564 None:intergenic 45.0%
TCGATCTACTCTCCTTCCTA+TGG - chr6_3:98437791-98437810 None:intergenic 45.0%
AGGAAGGAGAGTAGATCGAA+TGG + chr6_3:98437792-98437811 Msa0968210:intron 45.0%
AAGGAGAGTAGATCGAATGG+AGG + chr6_3:98437795-98437814 Msa0968210:intron 45.0%
AGGAGAGTAGATCGAATGGA+GGG + chr6_3:98437796-98437815 Msa0968210:intron 45.0%
TAAAACATGTCCCACTAGGC+AGG - chr6_3:98437964-98437983 None:intergenic 45.0%
!! AGCTTGTTAGCAGCTTGACA+AGG + chr6_3:98438469-98438488 Msa0968210:CDS 45.0%
! GCTTGTTAGCAGCTTGACAA+GGG + chr6_3:98438470-98438489 Msa0968210:CDS 45.0%
CTTGTTAGCAGCTTGACAAG+GGG + chr6_3:98438471-98438490 Msa0968210:CDS 45.0%
TTGTTAGCAGCTTGACAAGG+GGG + chr6_3:98438472-98438491 Msa0968210:CDS 45.0%
GTAACGAATCAACAGGCACT+GGG - chr6_3:98438517-98438536 None:intergenic 45.0%
TGTAACGAATCAACAGGCAC+TGG - chr6_3:98438518-98438537 None:intergenic 45.0%
TTGTAGGTTATCCGTGAGTC+AGG + chr6_3:98438616-98438635 Msa0968210:intron 45.0%
! CCATTTCTGACTTGTGACGT+AGG - chr6_3:98438693-98438712 None:intergenic 45.0%
CCTACGTCACAAGTCAGAAA+TGG + chr6_3:98438690-98438709 Msa0968210:CDS 45.0%
!! GTGCGGCTTTAAAACTTTGC+AGG + chr6_3:98439014-98439033 Msa0968210:intron 45.0%
!! CGGCTTTAAAACTTTGCAGG+TGG + chr6_3:98439017-98439036 Msa0968210:intron 45.0%
ATCCCTGATGCAAAGGAAAC+AGG + chr6_3:98439489-98439508 Msa0968210:CDS 45.0%
TCCCTGATGCAAAGGAAACA+GGG + chr6_3:98439490-98439509 Msa0968210:CDS 45.0%
ACCCTGTTTCCTTTGCATCA+GGG - chr6_3:98439494-98439513 None:intergenic 45.0%
AACCCTGTTTCCTTTGCATC+AGG - chr6_3:98439495-98439514 None:intergenic 45.0%
GTTCACTTATCTGTCTACGC+AGG + chr6_3:98439548-98439567 Msa0968210:CDS 45.0%
ATGGTTCAAGGGGAACAACT+TGG - chr6_3:98439646-98439665 None:intergenic 45.0%
! CCCAGGAAGTGTAGTATCTA+TGG - chr6_3:98439665-98439684 None:intergenic 45.0%
CTACACTTCCTGGGAATTGA+AGG + chr6_3:98439671-98439690 Msa0968210:CDS 45.0%
!! TTTTTGGCCCTTCAATTCCC+AGG - chr6_3:98439682-98439701 None:intergenic 45.0%
AATCATCTTCTTTCGGCGGA+GGG - chr6_3:98440211-98440230 None:intergenic 45.0%
AAATCATCTTCTTTCGGCGG+AGG - chr6_3:98440212-98440231 None:intergenic 45.0%
CTAAACACACTTGGAGGTGA+TGG + chr6_3:98440326-98440345 Msa0968210:CDS 45.0%
GCTGTAAAGGACTTCCTGTT+TGG + chr6_3:98440371-98440390 Msa0968210:CDS 45.0%
GGATATCAAATGGCCCAAAC+AGG - chr6_3:98440388-98440407 None:intergenic 45.0%
TGATATCCCGCTTGTCAATC+TGG + chr6_3:98440400-98440419 Msa0968210:CDS 45.0%
TAGTCTCCAGATTGACAAGC+GGG - chr6_3:98440409-98440428 None:intergenic 45.0%
CTAGTCTCCAGATTGACAAG+CGG - chr6_3:98440410-98440429 None:intergenic 45.0%
ATTACAGGAGCCTTCAGAAG+AGG + chr6_3:98440505-98440524 Msa0968210:intron 45.0%
!! TGACATTGATTCTGTGCCCA+AGG + chr6_3:98440532-98440551 Msa0968210:CDS 45.0%
! GGTTGGGATTTGACTTCCTT+GGG - chr6_3:98440551-98440570 None:intergenic 45.0%
! TGGTTGGGATTTGACTTCCT+TGG - chr6_3:98440552-98440571 None:intergenic 45.0%
CTTTCTTCTCTGCAAGTGGT+TGG - chr6_3:98440568-98440587 None:intergenic 45.0%
!!! ACCAGTTGGCTTTTTACCAG+AGG - chr6_3:98440591-98440610 None:intergenic 45.0%
! TATGCATCAGCTGTTGATGG+GGG - chr6_3:98440635-98440654 None:intergenic 45.0%
!! GTTTGCAAACTCTGGAATGG+AGG - chr6_3:98440672-98440691 None:intergenic 45.0%
TCGTGTTTGTGCAGTTGTAC+TGG - chr6_3:98440899-98440918 None:intergenic 45.0%
GTACTCGTCCCCTCTATTTA+TGG + chr6_3:98441199-98441218 Msa0968210:intron 45.0%
TGAATACCAGCTAGAGGATC+TGG + chr6_3:98441343-98441362 Msa0968210:CDS 45.0%
! AGGAATGCATGGGAAAGCAT+GGG + chr6_3:98441413-98441432 Msa0968210:CDS 45.0%
! GTTTATCATGGTGAGGGCAT+TGG - chr6_3:98441667-98441686 None:intergenic 45.0%
CTGTAGCATAGTTACTGTGG+TGG + chr6_3:98441739-98441758 Msa0968210:intron 45.0%
ACGAGTCTGTGATACTAACG+TGG - chr6_3:98441815-98441834 None:intergenic 45.0%
! CACAGACTCGTTTTCGATGA+AGG + chr6_3:98441824-98441843 Msa0968210:intron 45.0%
! GTTTAGTTCAACAGAGGGGA+AGG + chr6_3:98441962-98441981 Msa0968210:intron 45.0%
TTAGTTCAACAGAGGGGAAG+GGG + chr6_3:98441964-98441983 Msa0968210:intron 45.0%
AGAGGCTCTTGGTATTACAC+TGG - chr6_3:98442077-98442096 None:intergenic 45.0%
CAGATAAATACTGACAGGGC+CGG + chr6_3:98442196-98442215 Msa0968210:intron 45.0%
! GACCTCTAAAGATGTTTGGC+CGG - chr6_3:98442218-98442237 None:intergenic 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - chr6_3:98442391-98442410 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - chr6_3:98442392-98442411 None:intergenic 45.0%
TTCTCCAGCTCAGTTGGTTA+GGG - chr6_3:98442462-98442481 None:intergenic 45.0%
TTTCTCCAGCTCAGTTGGTT+AGG - chr6_3:98442463-98442482 None:intergenic 45.0%
ACATGTTTCTCCAGCTCAGT+TGG - chr6_3:98442468-98442487 None:intergenic 45.0%
!! AATCTTTCTTTGGGGCCTGT+TGG - chr6_3:98442958-98442977 None:intergenic 45.0%
ACAGGCCCCAAAGAAAGATT+AGG + chr6_3:98442958-98442977 Msa0968210:intron 45.0%
CAGGCCCCAAAGAAAGATTA+GGG + chr6_3:98442959-98442978 Msa0968210:intron 45.0%
!! TAGGGTATTGTGGCTTACTC+GGG + chr6_3:98442977-98442996 Msa0968210:intron 45.0%
CTTACTCGGGCAATTTCGTA+TGG + chr6_3:98442990-98443009 Msa0968210:intron 45.0%
TTGCAGAATGTATAGGCTGG+GGG - chr6_3:98443224-98443243 None:intergenic 45.0%
GTTGCAGAATGTATAGGCTG+GGG - chr6_3:98443225-98443244 None:intergenic 45.0%
GGTTGCAGAATGTATAGGCT+GGG - chr6_3:98443226-98443245 None:intergenic 45.0%
TGGTTGCAGAATGTATAGGC+TGG - chr6_3:98443227-98443246 None:intergenic 45.0%
! GTGTCATGGAGCACAAGTTT+TGG + chr6_3:98443575-98443594 Msa0968210:intron 45.0%
TCTCTTCTCCAACATTGGAG+AGG + chr6_3:98443678-98443697 Msa0968210:intron 45.0%
TGAATTGGGTGGAACAACCT+CGG - chr6_3:98443853-98443872 None:intergenic 45.0%
GTGTGTGATCTTGAATTGGG+TGG - chr6_3:98443864-98443883 None:intergenic 45.0%
! CGGTTGTCTTTTGGACTTGA+CGG + chr6_3:98443930-98443949 Msa0968210:CDS 45.0%
! TTTTGGACTTGACGGTCCAA+AGG + chr6_3:98443938-98443957 Msa0968210:CDS 45.0%
GAAATTGACTGTCAGATCCG+AGG + chr6_3:98443971-98443990 Msa0968210:CDS 45.0%
GCTAGCCACAATCTCATGAA+TGG - chr6_3:98444015-98444034 None:intergenic 45.0%
! TGGCTAGCGGATAATCTATC+AGG + chr6_3:98444027-98444046 Msa0968210:exon 45.0%
TGGTAGACTAGCAACGATAC+TGG + chr6_3:98444192-98444211 Msa0968210:three_prime_UTR 45.0%
GACGACACAAACATTGGTCA+AGG - chr6_3:98444314-98444333 None:intergenic 45.0%
!! AAAAAAAAAAAAAAAAAAGA+AGG - chr6_3:98438348-98438367 None:intergenic 5.0%
!! AATATTAAGAAAATATTAAT+AGG + chr6_3:98441902-98441921 Msa0968210:intron 5.0%
!!! TGTTTATTTTTTATTTTAAA+AGG - chr6_3:98442263-98442282 None:intergenic 5.0%
CATCACGGTAGCTGAATCTC+AGG - chr6_3:98435206-98435225 None:intergenic 50.0%
CTGAGATTCAGCTACCGTGA+TGG + chr6_3:98435204-98435223 Msa0968210:exon 50.0%
! ATCTGATCGAAGGCGTGTGT+CGG + chr6_3:98435499-98435518 Msa0968210:intron 50.0%
CATAGGCTCTGTCACGATTG+CGG + chr6_3:98435539-98435558 Msa0968210:intron 50.0%
TGAAAAGGGGGCAGTTCTTC+AGG + chr6_3:98435810-98435829 Msa0968210:CDS 50.0%
GGCAGTTCTTCAGGAAGCAA+GGG + chr6_3:98435819-98435838 Msa0968210:CDS 50.0%
AGATGCTAGGAGATGCTCAC+AGG + chr6_3:98435861-98435880 Msa0968210:CDS 50.0%
GATACGACACAGCACTCGAA+TGG - chr6_3:98436427-98436446 None:intergenic 50.0%
GTGCTGTGTCGTATCACAGA+CGG + chr6_3:98436432-98436451 Msa0968210:CDS 50.0%
AAGGCAGCACTCGCAACAAT+TGG - chr6_3:98436513-98436532 None:intergenic 50.0%
AAGGTGGAGCAATGAGGTTC+AGG + chr6_3:98436667-98436686 Msa0968210:CDS 50.0%
CACCAGGTATGCTGCAAGAT+TGG + chr6_3:98436743-98436762 Msa0968210:intron 50.0%
AAATTGGGACGGAGGGAGTA+TGG + chr6_3:98437455-98437474 Msa0968210:intron 50.0%
! CCCCTAGTCCATTGATTGTG+GGG - chr6_3:98437544-98437563 None:intergenic 50.0%
!! CCCCACAATCAATGGACTAG+GGG + chr6_3:98437541-98437560 Msa0968210:intron 50.0%
! CACCCCTAGTCCATTGATTG+TGG - chr6_3:98437546-98437565 None:intergenic 50.0%
TTAGGTGGTTTGAGCATGCG+TGG + chr6_3:98437742-98437761 Msa0968210:intron 50.0%
CTATGGAATCGACACTCGAC+AGG - chr6_3:98437774-98437793 None:intergenic 50.0%
!! CTGTCGAGTGTCGATTCCAT+AGG + chr6_3:98437772-98437791 Msa0968210:intron 50.0%
!! CGAGTGTCGATTCCATAGGA+AGG + chr6_3:98437776-98437795 Msa0968210:intron 50.0%
! CAACCAAGCCTTATCCCACT+AGG - chr6_3:98438031-98438050 None:intergenic 50.0%
TGGTCTGAGCTGAACCATGA+TGG + chr6_3:98438238-98438257 Msa0968210:intron 50.0%
TGTTAGCAGCTTGACAAGGG+GGG + chr6_3:98438473-98438492 Msa0968210:CDS 50.0%
!! ATCAACAGGCACTGGGCTAA+AGG - chr6_3:98438510-98438529 None:intergenic 50.0%
TGCTGTTCGCACCTTGAACA+AGG + chr6_3:98438834-98438853 Msa0968210:CDS 50.0%
CAATGGGGAAGTTGCTTGAG+AGG - chr6_3:98438909-98438928 None:intergenic 50.0%
GTGTGGCAATGCTTCTGTTC+TGG - chr6_3:98439104-98439123 None:intergenic 50.0%
GTGAGCACACTGGCAAAGTT+TGG + chr6_3:98439779-98439798 Msa0968210:CDS 50.0%
GAGGCTTTCTTCTCTGCAAG+TGG - chr6_3:98440572-98440591 None:intergenic 50.0%
CTTGCAGAGAAGAAAGCCTC+TGG + chr6_3:98440572-98440591 Msa0968210:CDS 50.0%
GCCTCTGGTAAAAAGCCAAC+TGG + chr6_3:98440587-98440606 Msa0968210:CDS 50.0%
TGGAAGAGACTTGAGAGGCT+TGG - chr6_3:98441080-98441099 None:intergenic 50.0%
TGTGGCATTTGAGAAGCCTG+AGG + chr6_3:98441123-98441142 Msa0968210:CDS 50.0%
GTGGCATTTGAGAAGCCTGA+GGG + chr6_3:98441124-98441143 Msa0968210:CDS 50.0%
ATCATCTTCAGCCTCACCAG+TGG - chr6_3:98441312-98441331 None:intergenic 50.0%
ACTGGTGAGGCTGAAGATGA+TGG + chr6_3:98441311-98441330 Msa0968210:CDS 50.0%
CAGGAATGCATGGGAAAGCA+TGG + chr6_3:98441412-98441431 Msa0968210:CDS 50.0%
CATCCACTCGCTCACAATCA+GGG - chr6_3:98441439-98441458 None:intergenic 50.0%
TCATCCACTCGCTCACAATC+AGG - chr6_3:98441440-98441459 None:intergenic 50.0%
TGTGAGCGAGTGGATGAGTA+TGG + chr6_3:98441443-98441462 Msa0968210:CDS 50.0%
CGAGTGGATGAGTATGGTCT+TGG + chr6_3:98441449-98441468 Msa0968210:CDS 50.0%
! ATGAGTATGGTCTTGGCCCA+AGG + chr6_3:98441456-98441475 Msa0968210:CDS 50.0%
! TGAGTATGGTCTTGGCCCAA+GGG + chr6_3:98441457-98441476 Msa0968210:CDS 50.0%
! TGTGGTGGGACAATTCTGCT+TGG + chr6_3:98441754-98441773 Msa0968210:intron 50.0%
TAACAGCTGTCAGAGGCTCT+TGG - chr6_3:98442088-98442107 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG - chr6_3:98442387-98442406 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - chr6_3:98442393-98442412 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG + chr6_3:98442390-98442409 Msa0968210:intron 50.0%
! GTGGGATAAGGCTTGGTTGT+TGG + chr6_3:98438032-98438051 Msa0968210:intron 50.0%
ATCCTAAGTCAAGGCGTGTG+AGG + chr6_3:98442430-98442449 Msa0968210:intron 50.0%
! GCAGTCTAAAACCCCTAGCT+TGG + chr6_3:98442556-98442575 Msa0968210:intron 50.0%
ACGATCACAGGTATGTAGGC+TGG - chr6_3:98442624-98442643 None:intergenic 50.0%
AGTTCCCGGATCCAATCTCT+TGG - chr6_3:98442799-98442818 None:intergenic 50.0%
GAACGCAAGAAAGGAACAGG+AGG + chr6_3:98442829-98442848 Msa0968210:intron 50.0%
! AGCTCCAGAGAAGTTTGCTC+AGG + chr6_3:98443019-98443038 Msa0968210:intron 50.0%
TGTGCCTGAGCAAACTTCTC+TGG - chr6_3:98443026-98443045 None:intergenic 50.0%
CTTCGTCTCCTCTCCAATGT+TGG - chr6_3:98443689-98443708 None:intergenic 50.0%
GGAGACGAAGTCAAGAGTAG+AGG + chr6_3:98443699-98443718 Msa0968210:intron 50.0%
AGAGTGGGGAGAGAAATGGA+GGG - chr6_3:98443745-98443764 None:intergenic 50.0%
TAGAGTGGGGAGAGAAATGG+AGG - chr6_3:98443746-98443765 None:intergenic 50.0%
! GTGCTTGTGCGGTTGTCTTT+TGG + chr6_3:98443921-98443940 Msa0968210:CDS 50.0%
CACGAGTGGTTGAGCCATCA+CGG - chr6_3:98435221-98435240 None:intergenic 55.0%
GATGATGACCGCGACGATGA+AGG + chr6_3:98435247-98435266 Msa0968210:CDS 55.0%
GGGCAGTTCTTCAGGAAGCA+AGG + chr6_3:98435818-98435837 Msa0968210:CDS 55.0%
GATATCTCCCTCTGCAGACG+AGG + chr6_3:98436222-98436241 Msa0968210:CDS 55.0%
CAAGTCACCTCGTCTGCAGA+GGG - chr6_3:98436232-98436251 None:intergenic 55.0%
ACAAGTCACCTCGTCTGCAG+AGG - chr6_3:98436233-98436252 None:intergenic 55.0%
TATCACAGACGGAACCCTCC+TGG + chr6_3:98436443-98436462 Msa0968210:CDS 55.0%
CCGCTCAATTTGTGCCAGGA+GGG - chr6_3:98436460-98436479 None:intergenic 55.0%
CCCTCCTGGCACAAATTGAG+CGG + chr6_3:98436457-98436476 Msa0968210:CDS 55.0%
ACCGCTCAATTTGTGCCAGG+AGG - chr6_3:98436461-98436480 None:intergenic 55.0%
!! GGTATTTCTGGCCGAGTGGA+TGG - chr6_3:98437523-98437542 None:intergenic 55.0%
ATGTAGCCGATCCTGCCTAG+TGG + chr6_3:98437950-98437969 Msa0968210:intron 55.0%
TGTAGCCGATCCTGCCTAGT+GGG + chr6_3:98437951-98437970 Msa0968210:intron 55.0%
CATGTCCCACTAGGCAGGAT+CGG - chr6_3:98437959-98437978 None:intergenic 55.0%
CTTATCCCACTAGGCGGGAT+CGG - chr6_3:98438022-98438041 None:intergenic 55.0%
! CAAGCCTTATCCCACTAGGC+GGG - chr6_3:98438027-98438046 None:intergenic 55.0%
! CCAAGCCTTATCCCACTAGG+CGG - chr6_3:98438028-98438047 None:intergenic 55.0%
GCACGATTGCGCCTTCTCAA+AGG + chr6_3:98438322-98438341 Msa0968210:intron 55.0%
TCAGCTTCAGTGAGCTCCAC+AGG - chr6_3:98440822-98440841 None:intergenic 55.0%
!! CTGAGGGAGTGCCAACACTT+GGG + chr6_3:98441140-98441159 Msa0968210:CDS 55.0%
!! TTTCAGGTTGACCCGACCAC+TGG + chr6_3:98441293-98441312 Msa0968210:intron 55.0%
TCTTCAGCCTCACCAGTGGT+CGG - chr6_3:98441308-98441327 None:intergenic 55.0%
CGATCTCCAGATCCTCTAGC+TGG - chr6_3:98441352-98441371 None:intergenic 55.0%
CACAAGGCTGCAAGCCAAGA+AGG - chr6_3:98441517-98441536 None:intergenic 55.0%
!! TCTTGGCTTGCAGCCTTGTG+AGG + chr6_3:98441517-98441536 Msa0968210:CDS 55.0%
! AGCCTTGTGAGGTAAGCCAG+TGG + chr6_3:98441528-98441547 Msa0968210:intron 55.0%
!! CACCACTGGCTTACCTCACA+AGG - chr6_3:98441533-98441552 None:intergenic 55.0%
GGCCGGCCAAACATCTTTAG+AGG + chr6_3:98442213-98442232 Msa0968210:intron 55.0%
ACTAAGTGGGGTCGGCTACA+TGG - chr6_3:98442379-98442398 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG + chr6_3:98442378-98442397 Msa0968210:intron 55.0%
TGTAGCCGACCCCACTTAGT+GGG + chr6_3:98442379-98442398 Msa0968210:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG + chr6_3:98442385-98442404 Msa0968210:intron 55.0%
TGCCTCACACGCCTTGACTT+AGG - chr6_3:98442435-98442454 None:intergenic 55.0%
CTCACCCTAACCAACTGAGC+TGG + chr6_3:98442455-98442474 Msa0968210:intron 55.0%
AAAACCCCTAGCTTGGCCCT+TGG + chr6_3:98442563-98442582 Msa0968210:intron 55.0%
AAACCCCTAGCTTGGCCCTT+GGG + chr6_3:98442564-98442583 Msa0968210:intron 55.0%
AGGCTGGGGGAGAGTAACTT+TGG - chr6_3:98443211-98443230 None:intergenic 55.0%
GAGGCGCGTACAACTACAGT+AGG + chr6_3:98443547-98443566 Msa0968210:intron 55.0%
! GCGAGTGCTGCCTTAGTCAG+TGG + chr6_3:98436519-98436538 Msa0968210:CDS 60.0%
!! TGCACTGGGTTTGCTGCACC+AGG + chr6_3:98436727-98436746 Msa0968210:CDS 60.0%
!! GTGGGGTATTTCTGGCCGAG+TGG - chr6_3:98437527-98437546 None:intergenic 60.0%
GGTGGTTTGAGCATGCGTGG+AGG + chr6_3:98437745-98437764 Msa0968210:intron 60.0%
ATGTAGCCGATCCCGCCTAG+TGG + chr6_3:98438013-98438032 Msa0968210:intron 60.0%
TGTAGCCGATCCCGCCTAGT+GGG + chr6_3:98438014-98438033 Msa0968210:intron 60.0%
CGATCCCGCCTAGTGGGATA+AGG + chr6_3:98438020-98438039 Msa0968210:intron 60.0%
CCGCCTAGTGGGATAAGGCT+TGG + chr6_3:98438025-98438044 Msa0968210:intron 60.0%
TGCCAGTGTGCTCACAGCAC+CGG - chr6_3:98439774-98439793 None:intergenic 60.0%
TCTTCTTTCGGCGGAGGGTG+AGG - chr6_3:98440206-98440225 None:intergenic 60.0%
!! GGAGGAGCACCCAAACCAGT+TGG - chr6_3:98440605-98440624 None:intergenic 60.0%
GGTTTGGGTGCTCCTCCAAG+TGG + chr6_3:98440608-98440627 Msa0968210:CDS 60.0%
! GTTGATGGGGGACCACTTGG+AGG - chr6_3:98440623-98440642 None:intergenic 60.0%
! GCTGTTGATGGGGGACCACT+TGG - chr6_3:98440626-98440645 None:intergenic 60.0%
TTACCAGTCCTCAGCGCCTG+TGG + chr6_3:98440803-98440822 Msa0968210:intron 60.0%
!! CCAAGTGTTGGCACTCCCTC+AGG - chr6_3:98441142-98441161 None:intergenic 60.0%
!! CCTGAGGGAGTGCCAACACT+TGG + chr6_3:98441139-98441158 Msa0968210:CDS 60.0%
CTTCAGCCTCACCAGTGGTC+GGG - chr6_3:98441307-98441326 None:intergenic 60.0%
TCTTGGCCCAAGGGAGAGCT+TGG + chr6_3:98441466-98441485 Msa0968210:CDS 60.0%
CTTCGGCCAAGCTCTCCCTT+GGG - chr6_3:98441475-98441494 None:intergenic 60.0%
CTTTCGGCGGAGGGTGAGGA+GGG - chr6_3:98440202-98440221 None:intergenic 65.0%
TCTTTCGGCGGAGGGTGAGG+AGG - chr6_3:98440203-98440222 None:intergenic 65.0%
! AGTGAGCTCCACAGGCGCTG+AGG - chr6_3:98440814-98440833 None:intergenic 65.0%
GGTTGACCCGACCACTGGTG+AGG + chr6_3:98441298-98441317 Msa0968210:intron 65.0%
GGGCCCTGATTGTGAGCGAG+TGG + chr6_3:98441433-98441452 Msa0968210:CDS 65.0%
GCTTCGGCCAAGCTCTCCCT+TGG - chr6_3:98441476-98441495 None:intergenic 65.0%
TGTACTCAGGGCCGGCCCAA+GGG - chr6_3:98442582-98442601 None:intergenic 65.0%
TTGTACTCAGGGCCGGCCCA+AGG - chr6_3:98442583-98442602 None:intergenic 65.0%
!! GGCCGGTGCTGTGAGCACAC+TGG + chr6_3:98439769-98439788 Msa0968210:CDS 70.0%
!! GCTCCACAGGCGCTGAGGAC+TGG - chr6_3:98440809-98440828 None:intergenic 70.0%
CGGCCCAAGGGCCAAGCTAG+GGG - chr6_3:98442570-98442589 None:intergenic 70.0%
CCGGCCCAAGGGCCAAGCTA+GGG - chr6_3:98442571-98442590 None:intergenic 70.0%
CCCTAGCTTGGCCCTTGGGC+CGG + chr6_3:98442568-98442587 Msa0968210:intron 70.0%
!! GTGGGCTGTGCAGGGTACCG+AGG + chr6_3:98443833-98443852 Msa0968210:intron 70.0%
GCCGGCCCAAGGGCCAAGCT+AGG - chr6_3:98442572-98442591 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 98435053 98444423 98435053 ID=Msa0968210;Name=Msa0968210
chr6_3 mRNA 98435053 98444423 98435053 ID=Msa0968210-mRNA-1;Parent=Msa0968210;Name=Msa0968210-mRNA-1;_AED=0.09;_eAED=0.09;_QI=170|1|1|1|1|1|18|383|887
chr6_3 exon 98435053 98435268 98435053 ID=Msa0968210-mRNA-1:exon:18479;Parent=Msa0968210-mRNA-1
chr6_3 exon 98435785 98435882 98435785 ID=Msa0968210-mRNA-1:exon:18480;Parent=Msa0968210-mRNA-1
chr6_3 exon 98435995 98436045 98435995 ID=Msa0968210-mRNA-1:exon:18481;Parent=Msa0968210-mRNA-1
chr6_3 exon 98436130 98436243 98436130 ID=Msa0968210-mRNA-1:exon:18482;Parent=Msa0968210-mRNA-1
chr6_3 exon 98436357 98436557 98436357 ID=Msa0968210-mRNA-1:exon:18483;Parent=Msa0968210-mRNA-1
chr6_3 exon 98436647 98436748 98436647 ID=Msa0968210-mRNA-1:exon:18484;Parent=Msa0968210-mRNA-1
chr6_3 exon 98438438 98438545 98438438 ID=Msa0968210-mRNA-1:exon:18485;Parent=Msa0968210-mRNA-1
chr6_3 exon 98438622 98438855 98438622 ID=Msa0968210-mRNA-1:exon:18486;Parent=Msa0968210-mRNA-1
chr6_3 exon 98439036 98439286 98439036 ID=Msa0968210-mRNA-1:exon:18487;Parent=Msa0968210-mRNA-1
chr6_3 exon 98439398 98439569 98439398 ID=Msa0968210-mRNA-1:exon:18488;Parent=Msa0968210-mRNA-1
chr6_3 exon 98439668 98439823 98439668 ID=Msa0968210-mRNA-1:exon:18489;Parent=Msa0968210-mRNA-1
chr6_3 exon 98439940 98439990 98439940 ID=Msa0968210-mRNA-1:exon:18490;Parent=Msa0968210-mRNA-1
chr6_3 exon 98440302 98440442 98440302 ID=Msa0968210-mRNA-1:exon:18491;Parent=Msa0968210-mRNA-1
chr6_3 exon 98440512 98440709 98440512 ID=Msa0968210-mRNA-1:exon:18492;Parent=Msa0968210-mRNA-1
chr6_3 exon 98440810 98440941 98440810 ID=Msa0968210-mRNA-1:exon:18493;Parent=Msa0968210-mRNA-1
chr6_3 exon 98441025 98441198 98441025 ID=Msa0968210-mRNA-1:exon:18494;Parent=Msa0968210-mRNA-1
chr6_3 exon 98441299 98441538 98441299 ID=Msa0968210-mRNA-1:exon:18495;Parent=Msa0968210-mRNA-1
chr6_3 exon 98443846 98444423 98443846 ID=Msa0968210-mRNA-1:exon:18496;Parent=Msa0968210-mRNA-1
chr6_3 five_prime_UTR 98435053 98435222 98435053 ID=Msa0968210-mRNA-1:five_prime_utr;Parent=Msa0968210-mRNA-1
chr6_3 CDS 98435223 98435268 98435223 ID=Msa0968210-mRNA-1:cds;Parent=Msa0968210-mRNA-1
chr6_3 CDS 98435785 98435882 98435785 ID=Msa0968210-mRNA-1:cds;Parent=Msa0968210-mRNA-1
chr6_3 CDS 98435995 98436045 98435995 ID=Msa0968210-mRNA-1:cds;Parent=Msa0968210-mRNA-1
chr6_3 CDS 98436130 98436243 98436130 ID=Msa0968210-mRNA-1:cds;Parent=Msa0968210-mRNA-1
chr6_3 CDS 98436357 98436557 98436357 ID=Msa0968210-mRNA-1:cds;Parent=Msa0968210-mRNA-1
chr6_3 CDS 98436647 98436748 98436647 ID=Msa0968210-mRNA-1:cds;Parent=Msa0968210-mRNA-1
chr6_3 CDS 98438438 98438545 98438438 ID=Msa0968210-mRNA-1:cds;Parent=Msa0968210-mRNA-1
chr6_3 CDS 98438622 98438855 98438622 ID=Msa0968210-mRNA-1:cds;Parent=Msa0968210-mRNA-1
chr6_3 CDS 98439036 98439286 98439036 ID=Msa0968210-mRNA-1:cds;Parent=Msa0968210-mRNA-1
chr6_3 CDS 98439398 98439569 98439398 ID=Msa0968210-mRNA-1:cds;Parent=Msa0968210-mRNA-1
chr6_3 CDS 98439668 98439823 98439668 ID=Msa0968210-mRNA-1:cds;Parent=Msa0968210-mRNA-1
chr6_3 CDS 98439940 98439990 98439940 ID=Msa0968210-mRNA-1:cds;Parent=Msa0968210-mRNA-1
chr6_3 CDS 98440302 98440442 98440302 ID=Msa0968210-mRNA-1:cds;Parent=Msa0968210-mRNA-1
chr6_3 CDS 98440512 98440709 98440512 ID=Msa0968210-mRNA-1:cds;Parent=Msa0968210-mRNA-1
chr6_3 CDS 98440810 98440941 98440810 ID=Msa0968210-mRNA-1:cds;Parent=Msa0968210-mRNA-1
chr6_3 CDS 98441025 98441198 98441025 ID=Msa0968210-mRNA-1:cds;Parent=Msa0968210-mRNA-1
chr6_3 CDS 98441299 98441538 98441299 ID=Msa0968210-mRNA-1:cds;Parent=Msa0968210-mRNA-1
chr6_3 CDS 98443846 98444040 98443846 ID=Msa0968210-mRNA-1:cds;Parent=Msa0968210-mRNA-1
chr6_3 three_prime_UTR 98444041 98444423 98444041 ID=Msa0968210-mRNA-1:three_prime_utr;Parent=Msa0968210-mRNA-1
Gene Sequence

>Msa0968210

ATGGCTCAACCACTCGTGAAGAAAGATGATGACCGCGACGATGAAGCTGAGTATTCCCCTTTCATGGGAATTGAAAAGGGGGCAGTTCTTCAGGAAGCAAGGGTTTTTAATGATCCACAATTAGATGCTAGGAGATGCTCACAGGTTATTACAAAGCTGCTATACCTACTGAATCAGGGAGAGACTTTTACAAAGACCGAAGCCACAGAAGTTTTCTTTGCTGTCACTAAGCTTTTCCAGTCTAAAGATATGGGATTAAGGAGAATGGTGTATCTGATGATAAAGGAGATATCTCCCTCTGCAGACGAGGTTATTATTGTCACAAGCTCTCTTATGAAGGACATGAATAGCAAGATTGATATGTATAGAGCAAATGCCATTCGAGTGCTGTGTCGTATCACAGACGGAACCCTCCTGGCACAAATTGAGCGGTATTTGAAACAAGCAATTGTAGATAAGAATCCAATTGTTGCGAGTGCTGCCTTAGTCAGTGGCATTCATCTACTACAGACAAATCCTGAAATTGTAAAAAGGTGGAGCAATGAGGTTCAGGAATCTGTTCAATCAAGAGCAGCTTTTGTACAGTTTCATGCACTGGGTTTGCTGCACCAGATACGACAGAATGATCGGCTAGCTGTTAGCAAGCTTGTTAGCAGCTTGACAAGGGGGGCTGTTCGCTCTCCTTTAGCCCAGTGCCTGTTGATTCGTTACACAAGTCAGGTTATCCGTGAGTCAGGAAATAATACACAGTCAGGGGACCGCCCCTTCTATGATTTTCTTGAGAGTTGCCTACGTCACAAGTCAGAAATGGTGATTTTTGAAGCTGCCAGAGCTATTACAGAGCTCAATGGTGTAACAAGCCGAGAATTAAATCCAGCAATTACTGTTCTTCAGCTATTCTTAAGCTCTTCTAAGCCAGTTTTAAGATTTGCTGCTGTTCGCACCTTGAACAAGGTGGCAATGATACACCCAACATCAGTCACTAACTGCAACATTGATATGGAAAGTTTAATCTCTGACCAGAACAGAAGCATTGCCACACTTGCTATTACTACACTTTTGAAGACAGGAAATGAATCAAGTGTGGATCGTCTTATGAAACAGATTACAAATTTCATGTCTGATATTGCTGATGAGTTCAAAATCGTCGTTGTTGAAGCAATAAGATCATTGTGCCAGAAGTTCCCATTAAAATATAGATCTCTCATGAATTTCCTGAGTAACATTCTTAGGGAAGAAGGTGGTTTTGAGTACAAGAAGGCAATTGTAGATTCAATTGTGATTCTCATTAGAGAAATCCCTGATGCAAAGGAAACAGGGTTACTTCATCTCTGTGAGTTCATTGAAGATTGCGAGTTCACTTATCTGTCTACGCAGATACTACACTTCCTGGGAATTGAAGGGCCAAAAACATCAGACCCTAGCAAATATATTCGTTTCATTTACAATCGAGTACATCTTGAGAATGCAACAGTGAGGGCCGGTGCTGTGAGCACACTGGCAAAGTTTGGTGCTGCAGTTGATGAGTTAAAGCCGCGCATATTTGTTTTGCTAAGGCGATGTCTTTTTGACAGTGATGATGAGGTGCGTGATAGAGCAACCCTTTATCTAAACACACTTGGAGGTGATGGTTCTGTTGTTGAGACTGATAAAGCTGTAAAGGACTTCCTGTTTGGGCCATTTGATATCCCGCTTGTCAATCTGGAGACTAGTTTGAAAAATTATGAGCCTTCAGAAGAGGCTTTTGACATTGATTCTGTGCCCAAGGAAGTCAAATCCCAACCACTTGCAGAGAAGAAAGCCTCTGGTAAAAAGCCAACTGGTTTGGGTGCTCCTCCAAGTGGTCCCCCATCAACAGCTGATGCATATCAGAGAGTGCTTTCCTCCATTCCAGAGTTTGCAAACTTTGGGAACCTTTTTAAGTCCTCAGCGCCTGTGGAGCTCACTGAAGCTGAGACAGAATATGCAGTTAATGTCGTTAAACACATTTTTGATAGGCATGTTGTGTTCCAGTACAACTGCACAAACACGATACCAGAGCAATTATTAGAACATGTTATCGTAATTGTGGATAATTCAGAAGCAGATGAGTTTTCAGAGGTGTTCTCCAAGCCTCTCAAGTCTCTTCCATATGATTCACCTGGACAGATTTTTGTGGCATTTGAGAAGCCTGAGGGAGTGCCAACACTTGGGAAATTTTCTAACGTTCTGAAGTTTATTGTTCGAGAGGTTGACCCGACCACTGGTGAGGCTGAAGATGATGGTGTTGAAGATGAATACCAGCTAGAGGATCTGGAGATCGTTTCAGCAGATTACACATTGAAAGTGGGGGTATCTAATTTCAGGAATGCATGGGAAAGCATGGGCCCTGATTGTGAGCGAGTGGATGAGTATGGTCTTGGCCCAAGGGAGAGCTTGGCCGAAGCTGTAAATACTGTCATCAACCTTCTTGGCTTGCAGCCTTGTGAGGGTACCGAGGTTGTTCCACCCAATTCAAGATCACACACATGTTTGTTGTCGGGTGTATTCATAGGAAATATAAAGGTGCTTGTGCGGTTGTCTTTTGGACTTGACGGTCCAAAGGATGTTGCAATGAAATTGACTGTCAGATCCGAGGATGAAACTGTCAGTGATGCCATTCATGAGATTGTGGCTAGCGGATAA

Protein sequence

>Msa0968210

MAQPLVKKDDDRDDEAEYSPFMGIEKGAVLQEARVFNDPQLDARRCSQVITKLLYLLNQGETFTKTEATEVFFAVTKLFQSKDMGLRRMVYLMIKEISPSADEVIIVTSSLMKDMNSKIDMYRANAIRVLCRITDGTLLAQIERYLKQAIVDKNPIVASAALVSGIHLLQTNPEIVKRWSNEVQESVQSRAAFVQFHALGLLHQIRQNDRLAVSKLVSSLTRGAVRSPLAQCLLIRYTSQVIRESGNNTQSGDRPFYDFLESCLRHKSEMVIFEAARAITELNGVTSRELNPAITVLQLFLSSSKPVLRFAAVRTLNKVAMIHPTSVTNCNIDMESLISDQNRSIATLAITTLLKTGNESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLCQKFPLKYRSLMNFLSNILREEGGFEYKKAIVDSIVILIREIPDAKETGLLHLCEFIEDCEFTYLSTQILHFLGIEGPKTSDPSKYIRFIYNRVHLENATVRAGAVSTLAKFGAAVDELKPRIFVLLRRCLFDSDDEVRDRATLYLNTLGGDGSVVETDKAVKDFLFGPFDIPLVNLETSLKNYEPSEEAFDIDSVPKEVKSQPLAEKKASGKKPTGLGAPPSGPPSTADAYQRVLSSIPEFANFGNLFKSSAPVELTEAETEYAVNVVKHIFDRHVVFQYNCTNTIPEQLLEHVIVIVDNSEADEFSEVFSKPLKSLPYDSPGQIFVAFEKPEGVPTLGKFSNVLKFIVREVDPTTGEAEDDGVEDEYQLEDLEIVSADYTLKVGVSNFRNAWESMGPDCERVDEYGLGPRESLAEAVNTVINLLGLQPCEGTEVVPPNSRSHTCLLSGVFIGNIKVLVRLSFGLDGPKDVAMKLTVRSEDETVSDAIHEIVASG*