AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1455910

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1455910 MtrunA17_Chr1g0206881 97.980 297 6 0 57 353 154 450 0.0 609
Msa1455910 MtrunA17_Chr3g0140821 97.895 285 6 0 58 342 155 439 0.0 582
Msa1455910 MtrunA17_Chr4g0054511 97.544 285 7 0 58 342 155 439 0.0 582
Msa1455910 MtrunA17_Chr7g0253411 91.003 289 25 1 58 346 155 442 0.0 559
Msa1455910 MtrunA17_Chr8g0378821 91.815 281 23 0 58 338 155 435 0.0 555
Msa1455910 MtrunA17_Chr6g0461281 81.757 296 51 1 58 353 156 448 0.0 523
Msa1455910 MtrunA17_Chr2g0300671 72.474 287 79 0 58 344 150 436 5.35e-154 440
Msa1455910 MtrunA17_Chr2g0300491 71.186 295 85 0 58 352 150 444 8.20e-154 441
Msa1455910 MtrunA17_Chr3g0109241 96.377 138 5 0 171 308 1 138 1.71e-97 286
Msa1455910 MtrunA17_Chr4g0051631 38.710 279 163 1 59 337 154 424 1.28e-75 239
Msa1455910 MtrunA17_Chr4g0007371 38.351 279 164 1 59 337 156 426 9.81e-75 238
Msa1455910 MtrunA17_Chr4g0008401 38.710 279 163 1 59 337 154 424 1.44e-74 237
Msa1455910 MtrunA17_Chr1g0203181 37.993 279 165 1 59 337 154 424 2.10e-74 237
Msa1455910 MtrunA17_Chr2g0292921 37.993 279 165 1 59 337 154 424 3.06e-74 236
Msa1455910 MtrunA17_Chr4g0008361 37.993 279 165 1 59 337 154 424 4.85e-74 236
Msa1455910 MtrunA17_Chr3g0142731 37.276 279 167 1 59 337 156 426 1.71e-73 234
Msa1455910 MtrunA17_Chr8g0386781 36.140 285 174 1 59 343 154 430 2.56e-73 234
Msa1455910 MtrunA17_Chr8g0393021 37.276 279 167 1 59 337 155 425 5.80e-73 233
Msa1455910 MtrunA17_Chr7g0255791 37.634 279 166 2 59 337 154 424 7.44e-73 233
Msa1455910 MtrunA17_Chr7g0275431 27.397 292 194 6 57 336 154 439 2.23e-33 129
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1455910 AT4G14960.2 96.085 281 11 0 58 338 155 435 0.0 569
Msa1455910 AT1G50010.1 96.085 281 11 0 58 338 155 435 0.0 568
Msa1455910 AT1G04820.1 96.085 281 11 0 58 338 155 435 0.0 568
Msa1455910 AT5G19780.1 92.171 281 22 0 58 338 155 435 0.0 556
Msa1455910 AT5G19770.1 92.171 281 22 0 58 338 155 435 0.0 556
Msa1455910 AT1G64740.1 89.680 281 29 0 58 338 155 435 0.0 543
Msa1455910 AT4G14960.1 89.723 253 19 1 58 310 155 400 2.15e-166 471
Msa1455910 AT1G75780.1 37.993 279 165 1 59 337 155 425 4.55e-75 239
Msa1455910 AT5G62690.1 37.993 279 165 1 59 337 154 424 2.82e-74 237
Msa1455910 AT5G62700.1 37.993 279 165 1 59 337 154 424 2.82e-74 237
Msa1455910 AT2G29550.1 37.634 279 166 1 59 337 154 424 2.84e-74 237
Msa1455910 AT5G23860.2 37.993 279 165 1 59 337 154 424 3.00e-74 237
Msa1455910 AT5G23860.1 37.993 279 165 1 59 337 154 424 3.00e-74 237
Msa1455910 AT1G20010.1 37.634 279 166 1 59 337 155 425 5.58e-74 236
Msa1455910 AT5G44340.1 37.993 279 165 2 59 337 154 424 1.81e-73 234
Msa1455910 AT4G20890.1 37.634 279 166 1 59 337 154 424 2.01e-73 234
Msa1455910 AT5G12250.1 37.634 279 166 2 59 337 154 424 1.17e-72 233
Msa1455910 AT5G05620.1 27.740 292 193 6 57 336 154 439 1.47e-33 129
Msa1455910 AT3G61650.1 27.397 292 194 6 57 336 154 439 1.00e-32 127

Find 139 sgRNAs with CRISPR-Local

Find 314 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTGATGTTACTGTTCTTC+TGG 0.249418 tig0036750:+901 Msa1455910:CDS
AGAAAGCATGAAATGGATTC+TGG 0.259381 tig0036750:-1217 None:intergenic
GGAGGAACTGGTTCTGGCCT+TGG 0.267548 tig0036750:+736 Msa1455910:CDS
GAGCGTCTGTCTGTTGATTA+TGG 0.268831 tig0036750:+773 Msa1455910:CDS
TCTGCTTCTTTGAGGTTTGA+TGG 0.277274 tig0036750:+1144 Msa1455910:CDS
TTCTTTGTGTGTTGTTCCTT+TGG 0.303452 tig0036750:+1812 Msa1455910:three_prime_UTR
CATCCTTGTCTGCTTCTTTG+AGG 0.307856 tig0036750:+1136 Msa1455910:CDS
TTTAATTATAAGAAATGCTT+TGG 0.341707 tig0036750:-2093 None:intergenic
CCTCTCCACCCACTCCCTCT+TGG 0.347748 tig0036750:+874 Msa1455910:CDS
CAAGAGGACCATTCAGTTTG+TGG 0.350369 tig0036750:+1440 Msa1455910:CDS
CAGCCACCTACTGTTGTTCC+TGG 0.350820 tig0036750:+1501 Msa1455910:CDS
GCTTTCTCAGCAGATATAAC+TGG 0.353641 tig0036750:-1249 None:intergenic
GAAAAGTAGATAACCCGTTT+AGG 0.361645 tig0036750:-1883 None:intergenic
GTTGGAGGAGGAACTGGTTC+TGG 0.370223 tig0036750:+730 Msa1455910:CDS
ATTAGAATATGTTGAATGAT+TGG 0.375475 tig0036750:+1958 Msa1455910:three_prime_UTR
TTGCCACTGATGAGCTGCTC+AGG 0.398345 tig0036750:-478 None:intergenic
AATGCTGTTGGAGGAGGAAC+TGG 0.399457 tig0036750:+724 Msa1455910:CDS
CAGTCTTGTCACTCGGCATT+TGG 0.399542 tig0036750:-315 None:intergenic
CCGTGAGGATCTTGCTGCTT+TGG 0.402547 tig0036750:+1692 Msa1455910:CDS
CTGGTATGTGGGTGAGGGTA+TGG 0.404210 tig0036750:+1647 Msa1455910:CDS
CCTTAACCGTCTTGTTTCTC+AGG 0.406634 tig0036750:+988 Msa1455910:CDS
TCACTCGGCATTTGGCCATC+AGG 0.408719 tig0036750:-307 None:intergenic
GAAAAGGATTATGAAGAAGT+TGG 0.409613 tig0036750:+1714 Msa1455910:CDS
TTTGTGGATTGGTGCCCTAC+TGG 0.413566 tig0036750:+1456 Msa1455910:CDS
AGAGATCGTTGATCTGTGTT+TGG 0.419543 tig0036750:+645 Msa1455910:CDS
AACACCTTCTTCAGCGAGAC+TGG 0.421898 tig0036750:+361 Msa1455910:five_prime_UTR
ATGGAAAGAAATCCAAGCTT+GGG 0.425337 tig0036750:+792 Msa1455910:CDS
CAACATATGTAAGAAACAAT+AGG 0.429846 tig0036750:-1853 None:intergenic
GTTGAATGATTGGATGTTTG+TGG 0.431871 tig0036750:+1968 Msa1455910:three_prime_UTR
TACTGTCTATCCCTCCCCTC+AGG 0.434518 tig0036750:+817 Msa1455910:CDS
ACAAGTGTGGCTGAGGTGTT+TGG 0.441082 tig0036750:+1573 Msa1455910:CDS
TATGTTGATCAAGACCTAAA+CGG 0.447664 tig0036750:+1869 Msa1455910:three_prime_UTR
ATGAAATGGATTCTGGGATA+AGG 0.448724 tig0036750:-1210 None:intergenic
ACGGTTAAGGTTGGTGTAAG+TGG 0.452971 tig0036750:-975 None:intergenic
GGATCTTGCTGCTTTGGAAA+AGG 0.453193 tig0036750:+1698 Msa1455910:CDS
GACAGCAGCATTCACATCCT+TGG 0.453229 tig0036750:-1403 None:intergenic
TGCATTTGTTCACTGGTATG+TGG 0.454287 tig0036750:+1635 Msa1455910:CDS
TTCTTCAGCGAGACTGGTGC+TGG 0.455019 tig0036750:+367 Msa1455910:five_prime_UTR
ATGTTGATCAAGACCTAAAC+GGG 0.455506 tig0036750:+1870 Msa1455910:three_prime_UTR
CATATGAAGAAAGCATGAAA+TGG 0.460970 tig0036750:-1224 None:intergenic
CACAAACTGAATGGTCCTCT+TGG 0.463910 tig0036750:-1439 None:intergenic
TGAAATGGATTCTGGGATAA+GGG 0.468155 tig0036750:-1209 None:intergenic
CCTGAGAAACAAGACGGTTA+AGG 0.472342 tig0036750:-988 None:intergenic
CCAAGCGTGCATTTGTTCAC+TGG 0.476016 tig0036750:+1628 Msa1455910:CDS
TGTTCACTGGTATGTGGGTG+AGG 0.477980 tig0036750:+1641 Msa1455910:CDS
GAAGAAGTTGGTGCCGAGTC+TGG 0.479857 tig0036750:+1726 Msa1455910:CDS
GATAAGGGACCAAGTTGGTC+TGG 0.484347 tig0036750:-1194 None:intergenic
GAAAGCATGAAATGGATTCT+GGG 0.486512 tig0036750:-1216 None:intergenic
GTGGGTGAGGGTATGGAAGA+AGG 0.492111 tig0036750:+1654 Msa1455910:CDS
ATGACCACGGGCAAAGTTGT+TGG 0.493110 tig0036750:-512 None:intergenic
CACTTAGCCATTATAGATGA+TGG 0.493847 tig0036750:-1321 None:intergenic
GGACCATTCAGTTTGTGGAT+TGG 0.503034 tig0036750:+1445 Msa1455910:CDS
TATGGAAAGAAATCCAAGCT+TGG 0.504088 tig0036750:+791 Msa1455910:CDS
AAGCTATCTATGACATCTGT+AGG 0.504342 tig0036750:+930 Msa1455910:CDS
TCCTGGTGGTGACCTTGCTA+AGG 0.511101 tig0036750:+1518 Msa1455910:CDS
TGAGGGCGGTGATGAAGATA+TGG 0.511219 tig0036750:+1749 Msa1455910:CDS
CAGTGTGCTCCAAGAGGGAG+TGG 0.513536 tig0036750:-883 None:intergenic
ACAGCAGCATTCACATCCTT+GGG 0.514766 tig0036750:-1402 None:intergenic
CCAGTGAACAAATGCACGCT+TGG 0.525328 tig0036750:-1628 None:intergenic
CCGAGTGACAAGACTGTTGG+AGG 0.526598 tig0036750:+322 Msa1455910:five_prime_UTR
CCCTCGCCATGGAAAGTACA+TGG 0.526872 tig0036750:+1347 Msa1455910:CDS
TTCTTATATGCACAGCCTGA+TGG 0.528986 tig0036750:+292 None:intergenic
AAACTCAACAAGTGTGGCTG+AGG 0.529684 tig0036750:+1566 Msa1455910:CDS
GTGGAGAGGACACTGTTGTA+TGG 0.536266 tig0036750:-860 None:intergenic
AGCACCAGTCTCGCTGAAGA+AGG 0.536901 tig0036750:-365 None:intergenic
GATAACTGCACTGGTCTCCA+AGG 0.539021 tig0036750:+688 Msa1455910:CDS
ATGCCGAGTGACAAGACTGT+TGG 0.545145 tig0036750:+319 Msa1455910:five_prime_UTR
TGATGGCTCAAAAGCACTGT+TGG 0.546926 tig0036750:-1304 None:intergenic
GACTGAATTCCAGACCAACT+TGG 0.549713 tig0036750:+1185 Msa1455910:CDS
GCACCAATCCACAAACTGAA+TGG 0.551570 tig0036750:-1448 None:intergenic
GAGGTGGAAACCTGAGGGGA+GGG 0.551933 tig0036750:-827 None:intergenic
TGCCCTACTGGTTTCAAATG+TGG 0.553993 tig0036750:+1468 Msa1455910:CDS
ATAGACAGTAAACCCAAGCT+TGG 0.556586 tig0036750:-804 None:intergenic
CGGTTAAGGTTGGTGTAAGT+GGG 0.558069 tig0036750:-974 None:intergenic
CAACAGAGGTGGAAACCTGA+GGG 0.558387 tig0036750:-832 None:intergenic
AGCAAGCCATGTACTTTCCA+TGG 0.560681 tig0036750:-1353 None:intergenic
CAAAGCAGCAAGATCCTCAC+GGG 0.564402 tig0036750:-1691 None:intergenic
GTTATCGATGAGGTGAGGAC+TGG 0.564950 tig0036750:+433 Msa1455910:five_prime_UTR
GTTGGTGCCGAGTCTGGTGA+GGG 0.565547 tig0036750:+1732 Msa1455910:CDS
CCGAGGCGATGTTGTTCCCA+AGG 0.566146 tig0036750:+1386 Msa1455910:CDS
AAGCTTGCTGATAACTGCAC+TGG 0.572122 tig0036750:+679 Msa1455910:CDS
ACCACGGGCAAAGTTGTTGG+CGG 0.573940 tig0036750:-509 None:intergenic
CACTGATGAGCTGCTCAGGA+TGG 0.573952 tig0036750:-474 None:intergenic
GCATTTGTTCACTGGTATGT+GGG 0.578176 tig0036750:+1636 Msa1455910:CDS
GCTGCTCAGGATGGAAGAGT+TGG 0.579720 tig0036750:-465 None:intergenic
ATCACCGCCCTCACCAGACT+CGG 0.580489 tig0036750:-1739 None:intergenic
CCAAAGCAGCAAGATCCTCA+CGG 0.583986 tig0036750:-1692 None:intergenic
GCCATGTACTTTCCATGGCG+AGG 0.586030 tig0036750:-1348 None:intergenic
ATCAACAGACAGACGCTCAA+AGG 0.588248 tig0036750:-768 None:intergenic
CATGAAAACAATTCATCCAA+AGG 0.590994 tig0036750:-1828 None:intergenic
ACCTTAGCAAGGTCACCACC+AGG 0.592703 tig0036750:-1519 None:intergenic
GTTCACTGGTATGTGGGTGA+GGG 0.594621 tig0036750:+1642 Msa1455910:CDS
CCATGTACTTTCCATGGCGA+GGG 0.595056 tig0036750:-1347 None:intergenic
AGTTGGTGCCGAGTCTGGTG+AGG 0.599254 tig0036750:+1731 Msa1455910:CDS
ATACCACATTTGAAACCAGT+AGG 0.599725 tig0036750:-1471 None:intergenic
GTGCTCCAAGAGGGAGTGGG+TGG 0.600125 tig0036750:-879 None:intergenic
AAACCTCAAAGAAGCAGACA+AGG 0.601114 tig0036750:-1139 None:intergenic
AGTGACAAGACTGTTGGAGG+CGG 0.604399 tig0036750:+325 Msa1455910:five_prime_UTR
AGTGGGACGCTTAATGTCGA+GGG 0.611687 tig0036750:-957 None:intergenic
TACCACATTTGAAACCAGTA+GGG 0.612790 tig0036750:-1470 None:intergenic
CATCCTGAGCAGCTCATCAG+TGG 0.614786 tig0036750:+475 Msa1455910:five_prime_UTR
ACAACAGAGGTGGAAACCTG+AGG 0.615914 tig0036750:-833 None:intergenic
TATCAGCAAGCTTTCTGATG+CGG 0.616085 tig0036750:-669 None:intergenic
CTGCCCTCTGTACCTTAGCA+AGG 0.618015 tig0036750:-1530 None:intergenic
ATAACTGCACTGGTCTCCAA+GGG 0.620138 tig0036750:+689 Msa1455910:CDS
GCCGCCAACAACTTTGCCCG+TGG 0.620859 tig0036750:+508 Msa1455910:CDS
GCTAAGTGTGACCCTCGCCA+TGG 0.621505 tig0036750:+1336 Msa1455910:CDS
CCAAGAGGGAGTGGGTGGAG+AGG 0.621744 tig0036750:-874 None:intergenic
CTCACCTCATCGATAACAGT+GGG 0.621848 tig0036750:-427 None:intergenic
AGAAACAAGACGGTTAAGGT+TGG 0.623820 tig0036750:-984 None:intergenic
AACATCAGTGTGCTCCAAGA+GGG 0.624186 tig0036750:-888 None:intergenic
CCTCCAACAGTCTTGTCACT+CGG 0.624881 tig0036750:-322 None:intergenic
AAGTGGGACGCTTAATGTCG+AGG 0.627892 tig0036750:-958 None:intergenic
CCACCTACTGTTGTTCCTGG+TGG 0.628220 tig0036750:+1504 Msa1455910:CDS
TCACCACCAGGAACAACAGT+AGG 0.629041 tig0036750:-1507 None:intergenic
AGAGGTGGAAACCTGAGGGG+AGG 0.631975 tig0036750:-828 None:intergenic
AGGATGGAAGAGTTGGCGAT+AGG 0.639504 tig0036750:-458 None:intergenic
CCTTGGGAACAACATCGCCT+CGG 0.644372 tig0036750:-1386 None:intergenic
AGTGTGCTCCAAGAGGGAGT+GGG 0.645027 tig0036750:-882 None:intergenic
CTCAAAGGAGCAGAGAACCA+AGG 0.649243 tig0036750:-753 None:intergenic
GATTTCAAACTCAACAAGTG+TGG 0.651909 tig0036750:+1560 Msa1455910:CDS
TGACCTTGCTAAGGTACAGA+GGG 0.652678 tig0036750:+1527 Msa1455910:CDS
CATACTGGTATAATGACCAC+GGG 0.654535 tig0036750:-524 None:intergenic
GATTGGATGTTTGTGGACCG+TGG 0.657662 tig0036750:+1975 Msa1455910:three_prime_UTR
TCTGGGATAAGGGACCAAGT+TGG 0.660061 tig0036750:-1199 None:intergenic
TAACATCAGTGTGCTCCAAG+AGG 0.663355 tig0036750:-889 None:intergenic
CCACCAGGAACAACAGTAGG+TGG 0.665309 tig0036750:-1504 None:intergenic
GTGACCTTGCTAAGGTACAG+AGG 0.667763 tig0036750:+1526 Msa1455910:CDS
ACATACTGGTATAATGACCA+CGG 0.669902 tig0036750:-525 None:intergenic
GGTGCCGAGTCTGGTGAGGG+CGG 0.669914 tig0036750:+1735 Msa1455910:CDS
GTATGGCTCAACAACAGAGG+TGG 0.674184 tig0036750:-843 None:intergenic
TGAGCCCACTGTTATCGATG+AGG 0.676846 tig0036750:+423 Msa1455910:five_prime_UTR
TCGCTACAATCAAAACCAAG+AGG 0.680258 tig0036750:+1424 Msa1455910:CDS
CAGCTACCTGAGAAACAAGA+CGG 0.683784 tig0036750:-994 None:intergenic
CCACTGTTATCGATGAGGTG+AGG 0.685674 tig0036750:+428 Msa1455910:five_prime_UTR
CCTCACCTCATCGATAACAG+TGG 0.687640 tig0036750:-428 None:intergenic
GTTGTATGGCTCAACAACAG+AGG 0.698181 tig0036750:-846 None:intergenic
GCTTGCTGTTTGATGTACCG+AGG 0.704934 tig0036750:+1369 Msa1455910:CDS
AACAGAGGTGGAAACCTGAG+GGG 0.715815 tig0036750:-831 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAATTATAAGAAATGCTT+TGG - tig0036750:2096-2115 None:intergenic 15.0%
!! TTTAATTATAAGAAATGCTT+TGG - tig0036750:2096-2115 None:intergenic 15.0%
!!! TTCTAATGATTTTAGATAAG+AGG - tig0036750:1945-1964 None:intergenic 20.0%
!! ATTAGAATATGTTGAATGAT+TGG + tig0036750:1958-1977 Msa1455910:three_prime_UTR 20.0%
!!! TTCTAATGATTTTAGATAAG+AGG - tig0036750:1945-1964 None:intergenic 20.0%
!! ATTAGAATATGTTGAATGAT+TGG + tig0036750:1958-1977 Msa1455910:three_prime_UTR 20.0%
! ATCACAAATGAGTAATAATG+TGG - tig0036750:566-585 None:intergenic 25.0%
!!! TAATTTGTGTTACTTTCAGT+TGG + tig0036750:619-638 Msa1455910:intron 25.0%
!!! AATTTGTGTTACTTTCAGTT+GGG + tig0036750:620-639 Msa1455910:intron 25.0%
!!! CTTTGTTTTTGATTGTTTTC+AGG + tig0036750:1107-1126 Msa1455910:intron 25.0%
! CAACATATGTAAGAAACAAT+AGG - tig0036750:1856-1875 None:intergenic 25.0%
! ATCACAAATGAGTAATAATG+TGG - tig0036750:566-585 None:intergenic 25.0%
!!! TAATTTGTGTTACTTTCAGT+TGG + tig0036750:619-638 Msa1455910:intron 25.0%
!!! AATTTGTGTTACTTTCAGTT+GGG + tig0036750:620-639 Msa1455910:intron 25.0%
!!! CTTTGTTTTTGATTGTTTTC+AGG + tig0036750:1107-1126 Msa1455910:intron 25.0%
! CAACATATGTAAGAAACAAT+AGG - tig0036750:1856-1875 None:intergenic 25.0%
!!! TTTTTGGTTTTCAATGCTGT+TGG + tig0036750:712-731 Msa1455910:CDS 30.0%
ACAATTCTGATTGTGAATTG+CGG + tig0036750:1036-1055 Msa1455910:intron 30.0%
! CATATGAAGAAAGCATGAAA+TGG - tig0036750:1227-1246 None:intergenic 30.0%
! TTTTGAGCCATCATCTATAA+TGG + tig0036750:1314-1333 Msa1455910:CDS 30.0%
GAAAAGGATTATGAAGAAGT+TGG + tig0036750:1714-1733 Msa1455910:CDS 30.0%
CATGAAAACAATTCATCCAA+AGG - tig0036750:1831-1850 None:intergenic 30.0%
TATGTTGATCAAGACCTAAA+CGG + tig0036750:1869-1888 Msa1455910:three_prime_UTR 30.0%
!!! TTTTTGGTTTTCAATGCTGT+TGG + tig0036750:712-731 Msa1455910:CDS 30.0%
ACAATTCTGATTGTGAATTG+CGG + tig0036750:1036-1055 Msa1455910:intron 30.0%
! CATATGAAGAAAGCATGAAA+TGG - tig0036750:1227-1246 None:intergenic 30.0%
! TTTTGAGCCATCATCTATAA+TGG + tig0036750:1314-1333 Msa1455910:CDS 30.0%
GAAAAGGATTATGAAGAAGT+TGG + tig0036750:1714-1733 Msa1455910:CDS 30.0%
CATGAAAACAATTCATCCAA+AGG - tig0036750:1831-1850 None:intergenic 30.0%
TATGTTGATCAAGACCTAAA+CGG + tig0036750:1869-1888 Msa1455910:three_prime_UTR 30.0%
AAGATCTACAAAAACAGCAC+GGG - tig0036750:404-423 None:intergenic 35.0%
CAAGATCTACAAAAACAGCA+CGG - tig0036750:405-424 None:intergenic 35.0%
ACATACTGGTATAATGACCA+CGG - tig0036750:528-547 None:intergenic 35.0%
CATTGAAAACCAAAAACCCT+TGG - tig0036750:708-727 None:intergenic 35.0%
TATGGAAAGAAATCCAAGCT+TGG + tig0036750:791-810 Msa1455910:CDS 35.0%
ATGGAAAGAAATCCAAGCTT+GGG + tig0036750:792-811 Msa1455910:CDS 35.0%
AAGCTATCTATGACATCTGT+AGG + tig0036750:930-949 Msa1455910:CDS 35.0%
!! TGAAATGGATTCTGGGATAA+GGG - tig0036750:1212-1231 None:intergenic 35.0%
!! ATGAAATGGATTCTGGGATA+AGG - tig0036750:1213-1232 None:intergenic 35.0%
! GAAAGCATGAAATGGATTCT+GGG - tig0036750:1219-1238 None:intergenic 35.0%
! AGAAAGCATGAAATGGATTC+TGG - tig0036750:1220-1239 None:intergenic 35.0%
CACTTAGCCATTATAGATGA+TGG - tig0036750:1324-1343 None:intergenic 35.0%
! TACCACATTTGAAACCAGTA+GGG - tig0036750:1473-1492 None:intergenic 35.0%
! ATACCACATTTGAAACCAGT+AGG - tig0036750:1474-1493 None:intergenic 35.0%
GATTTCAAACTCAACAAGTG+TGG + tig0036750:1560-1579 Msa1455910:CDS 35.0%
! TTCTTTGTGTGTTGTTCCTT+TGG + tig0036750:1812-1831 Msa1455910:three_prime_UTR 35.0%
ATGTTGATCAAGACCTAAAC+GGG + tig0036750:1870-1889 Msa1455910:three_prime_UTR 35.0%
GAAAAGTAGATAACCCGTTT+AGG - tig0036750:1886-1905 None:intergenic 35.0%
GTTGAATGATTGGATGTTTG+TGG + tig0036750:1968-1987 Msa1455910:three_prime_UTR 35.0%
! TCATTTTCTAAACACAGCCA+CGG - tig0036750:1995-2014 None:intergenic 35.0%
AAGATCTACAAAAACAGCAC+GGG - tig0036750:404-423 None:intergenic 35.0%
CAAGATCTACAAAAACAGCA+CGG - tig0036750:405-424 None:intergenic 35.0%
ACATACTGGTATAATGACCA+CGG - tig0036750:528-547 None:intergenic 35.0%
CATTGAAAACCAAAAACCCT+TGG - tig0036750:708-727 None:intergenic 35.0%
TATGGAAAGAAATCCAAGCT+TGG + tig0036750:791-810 Msa1455910:CDS 35.0%
ATGGAAAGAAATCCAAGCTT+GGG + tig0036750:792-811 Msa1455910:CDS 35.0%
AAGCTATCTATGACATCTGT+AGG + tig0036750:930-949 Msa1455910:CDS 35.0%
!! TGAAATGGATTCTGGGATAA+GGG - tig0036750:1212-1231 None:intergenic 35.0%
!! ATGAAATGGATTCTGGGATA+AGG - tig0036750:1213-1232 None:intergenic 35.0%
! GAAAGCATGAAATGGATTCT+GGG - tig0036750:1219-1238 None:intergenic 35.0%
! AGAAAGCATGAAATGGATTC+TGG - tig0036750:1220-1239 None:intergenic 35.0%
CACTTAGCCATTATAGATGA+TGG - tig0036750:1324-1343 None:intergenic 35.0%
! TACCACATTTGAAACCAGTA+GGG - tig0036750:1473-1492 None:intergenic 35.0%
! ATACCACATTTGAAACCAGT+AGG - tig0036750:1474-1493 None:intergenic 35.0%
GATTTCAAACTCAACAAGTG+TGG + tig0036750:1560-1579 Msa1455910:CDS 35.0%
! TTCTTTGTGTGTTGTTCCTT+TGG + tig0036750:1812-1831 Msa1455910:three_prime_UTR 35.0%
ATGTTGATCAAGACCTAAAC+GGG + tig0036750:1870-1889 Msa1455910:three_prime_UTR 35.0%
GAAAAGTAGATAACCCGTTT+AGG - tig0036750:1886-1905 None:intergenic 35.0%
GTTGAATGATTGGATGTTTG+TGG + tig0036750:1968-1987 Msa1455910:three_prime_UTR 35.0%
! TCATTTTCTAAACACAGCCA+CGG - tig0036750:1995-2014 None:intergenic 35.0%
AGATCTACAAAAACAGCACG+GGG - tig0036750:403-422 None:intergenic 40.0%
CATACTGGTATAATGACCAC+GGG - tig0036750:527-546 None:intergenic 40.0%
GTTGTGAGTTAGAGACATAC+TGG - tig0036750:542-561 None:intergenic 40.0%
AGAGATCGTTGATCTGTGTT+TGG + tig0036750:645-664 Msa1455910:CDS 40.0%
TATCAGCAAGCTTTCTGATG+CGG - tig0036750:672-691 None:intergenic 40.0%
!! TTGGTTTTCAATGCTGTTGG+AGG + tig0036750:715-734 Msa1455910:CDS 40.0%
ATAGACAGTAAACCCAAGCT+TGG - tig0036750:807-826 None:intergenic 40.0%
CACTGATGTTACTGTTCTTC+TGG + tig0036750:901-920 Msa1455910:CDS 40.0%
AGAAACAAGACGGTTAAGGT+TGG - tig0036750:987-1006 None:intergenic 40.0%
AAACCTCAAAGAAGCAGACA+AGG - tig0036750:1142-1161 None:intergenic 40.0%
!! TCTGCTTCTTTGAGGTTTGA+TGG + tig0036750:1144-1163 Msa1455910:CDS 40.0%
GCTTTCTCAGCAGATATAAC+TGG - tig0036750:1252-1271 None:intergenic 40.0%
TCGCTACAATCAAAACCAAG+AGG + tig0036750:1424-1443 Msa1455910:CDS 40.0%
TGCATTTGTTCACTGGTATG+TGG + tig0036750:1635-1654 Msa1455910:CDS 40.0%
GCATTTGTTCACTGGTATGT+GGG + tig0036750:1636-1655 Msa1455910:CDS 40.0%
AGATCTACAAAAACAGCACG+GGG - tig0036750:403-422 None:intergenic 40.0%
CATACTGGTATAATGACCAC+GGG - tig0036750:527-546 None:intergenic 40.0%
GTTGTGAGTTAGAGACATAC+TGG - tig0036750:542-561 None:intergenic 40.0%
AGAGATCGTTGATCTGTGTT+TGG + tig0036750:645-664 Msa1455910:CDS 40.0%
TATCAGCAAGCTTTCTGATG+CGG - tig0036750:672-691 None:intergenic 40.0%
!! TTGGTTTTCAATGCTGTTGG+AGG + tig0036750:715-734 Msa1455910:CDS 40.0%
ATAGACAGTAAACCCAAGCT+TGG - tig0036750:807-826 None:intergenic 40.0%
CACTGATGTTACTGTTCTTC+TGG + tig0036750:901-920 Msa1455910:CDS 40.0%
AGAAACAAGACGGTTAAGGT+TGG - tig0036750:987-1006 None:intergenic 40.0%
AAACCTCAAAGAAGCAGACA+AGG - tig0036750:1142-1161 None:intergenic 40.0%
!! TCTGCTTCTTTGAGGTTTGA+TGG + tig0036750:1144-1163 Msa1455910:CDS 40.0%
GCTTTCTCAGCAGATATAAC+TGG - tig0036750:1252-1271 None:intergenic 40.0%
TCGCTACAATCAAAACCAAG+AGG + tig0036750:1424-1443 Msa1455910:CDS 40.0%
TGCATTTGTTCACTGGTATG+TGG + tig0036750:1635-1654 Msa1455910:CDS 40.0%
GCATTTGTTCACTGGTATGT+GGG + tig0036750:1636-1655 Msa1455910:CDS 40.0%
GATCTACAAAAACAGCACGG+GGG - tig0036750:402-421 None:intergenic 45.0%
CTCACCTCATCGATAACAGT+GGG - tig0036750:430-449 None:intergenic 45.0%
!! AAGCTTGCTGATAACTGCAC+TGG + tig0036750:679-698 Msa1455910:CDS 45.0%
! ATAACTGCACTGGTCTCCAA+GGG + tig0036750:689-708 Msa1455910:CDS 45.0%
! GTTTTCAATGCTGTTGGAGG+AGG + tig0036750:718-737 Msa1455910:CDS 45.0%
ATCAACAGACAGACGCTCAA+AGG - tig0036750:771-790 None:intergenic 45.0%
! GAGCGTCTGTCTGTTGATTA+TGG + tig0036750:773-792 Msa1455910:CDS 45.0%
GTTGTATGGCTCAACAACAG+AGG - tig0036750:849-868 None:intergenic 45.0%
AACATCAGTGTGCTCCAAGA+GGG - tig0036750:891-910 None:intergenic 45.0%
TAACATCAGTGTGCTCCAAG+AGG - tig0036750:892-911 None:intergenic 45.0%
!! CGGTTAAGGTTGGTGTAAGT+GGG - tig0036750:977-996 None:intergenic 45.0%
!! ACGGTTAAGGTTGGTGTAAG+TGG - tig0036750:978-997 None:intergenic 45.0%
CCTGAGAAACAAGACGGTTA+AGG - tig0036750:991-1010 None:intergenic 45.0%
!! CCTTAACCGTCTTGTTTCTC+AGG + tig0036750:988-1007 Msa1455910:CDS 45.0%
CAGCTACCTGAGAAACAAGA+CGG - tig0036750:997-1016 None:intergenic 45.0%
CATCCTTGTCTGCTTCTTTG+AGG + tig0036750:1136-1155 Msa1455910:CDS 45.0%
GACTGAATTCCAGACCAACT+TGG + tig0036750:1185-1204 Msa1455910:CDS 45.0%
!! TGATGGCTCAAAAGCACTGT+TGG - tig0036750:1307-1326 None:intergenic 45.0%
AGCAAGCCATGTACTTTCCA+TGG - tig0036750:1356-1375 None:intergenic 45.0%
ACAGCAGCATTCACATCCTT+GGG - tig0036750:1405-1424 None:intergenic 45.0%
CACAAACTGAATGGTCCTCT+TGG - tig0036750:1442-1461 None:intergenic 45.0%
CAAGAGGACCATTCAGTTTG+TGG + tig0036750:1440-1459 Msa1455910:CDS 45.0%
GGACCATTCAGTTTGTGGAT+TGG + tig0036750:1445-1464 Msa1455910:CDS 45.0%
GCACCAATCCACAAACTGAA+TGG - tig0036750:1451-1470 None:intergenic 45.0%
!! TGCCCTACTGGTTTCAAATG+TGG + tig0036750:1468-1487 Msa1455910:CDS 45.0%
TGACCTTGCTAAGGTACAGA+GGG + tig0036750:1527-1546 Msa1455910:CDS 45.0%
AAACTCAACAAGTGTGGCTG+AGG + tig0036750:1566-1585 Msa1455910:CDS 45.0%
!!! AGAATTTTCTGAAGCCCGTG+AGG + tig0036750:1677-1696 Msa1455910:CDS 45.0%
!! GGATCTTGCTGCTTTGGAAA+AGG + tig0036750:1698-1717 Msa1455910:CDS 45.0%
GATCTACAAAAACAGCACGG+GGG - tig0036750:402-421 None:intergenic 45.0%
CTCACCTCATCGATAACAGT+GGG - tig0036750:430-449 None:intergenic 45.0%
!! AAGCTTGCTGATAACTGCAC+TGG + tig0036750:679-698 Msa1455910:CDS 45.0%
! ATAACTGCACTGGTCTCCAA+GGG + tig0036750:689-708 Msa1455910:CDS 45.0%
! GTTTTCAATGCTGTTGGAGG+AGG + tig0036750:718-737 Msa1455910:CDS 45.0%
ATCAACAGACAGACGCTCAA+AGG - tig0036750:771-790 None:intergenic 45.0%
! GAGCGTCTGTCTGTTGATTA+TGG + tig0036750:773-792 Msa1455910:CDS 45.0%
GTTGTATGGCTCAACAACAG+AGG - tig0036750:849-868 None:intergenic 45.0%
AACATCAGTGTGCTCCAAGA+GGG - tig0036750:891-910 None:intergenic 45.0%
TAACATCAGTGTGCTCCAAG+AGG - tig0036750:892-911 None:intergenic 45.0%
!! CGGTTAAGGTTGGTGTAAGT+GGG - tig0036750:977-996 None:intergenic 45.0%
!! ACGGTTAAGGTTGGTGTAAG+TGG - tig0036750:978-997 None:intergenic 45.0%
CCTGAGAAACAAGACGGTTA+AGG - tig0036750:991-1010 None:intergenic 45.0%
!! CCTTAACCGTCTTGTTTCTC+AGG + tig0036750:988-1007 Msa1455910:CDS 45.0%
CAGCTACCTGAGAAACAAGA+CGG - tig0036750:997-1016 None:intergenic 45.0%
CATCCTTGTCTGCTTCTTTG+AGG + tig0036750:1136-1155 Msa1455910:CDS 45.0%
GACTGAATTCCAGACCAACT+TGG + tig0036750:1185-1204 Msa1455910:CDS 45.0%
!! TGATGGCTCAAAAGCACTGT+TGG - tig0036750:1307-1326 None:intergenic 45.0%
AGCAAGCCATGTACTTTCCA+TGG - tig0036750:1356-1375 None:intergenic 45.0%
ACAGCAGCATTCACATCCTT+GGG - tig0036750:1405-1424 None:intergenic 45.0%
CACAAACTGAATGGTCCTCT+TGG - tig0036750:1442-1461 None:intergenic 45.0%
CAAGAGGACCATTCAGTTTG+TGG + tig0036750:1440-1459 Msa1455910:CDS 45.0%
GGACCATTCAGTTTGTGGAT+TGG + tig0036750:1445-1464 Msa1455910:CDS 45.0%
GCACCAATCCACAAACTGAA+TGG - tig0036750:1451-1470 None:intergenic 45.0%
!! TGCCCTACTGGTTTCAAATG+TGG + tig0036750:1468-1487 Msa1455910:CDS 45.0%
TGACCTTGCTAAGGTACAGA+GGG + tig0036750:1527-1546 Msa1455910:CDS 45.0%
AAACTCAACAAGTGTGGCTG+AGG + tig0036750:1566-1585 Msa1455910:CDS 45.0%
!!! AGAATTTTCTGAAGCCCGTG+AGG + tig0036750:1677-1696 Msa1455910:CDS 45.0%
!! GGATCTTGCTGCTTTGGAAA+AGG + tig0036750:1698-1717 Msa1455910:CDS 45.0%
! CAGTCTTGTCACTCGGCATT+TGG - tig0036750:318-337 None:intergenic 50.0%
ATGCCGAGTGACAAGACTGT+TGG + tig0036750:319-338 Msa1455910:five_prime_UTR 50.0%
! CCTCCAACAGTCTTGTCACT+CGG - tig0036750:325-344 None:intergenic 50.0%
AGTGACAAGACTGTTGGAGG+CGG + tig0036750:325-344 Msa1455910:five_prime_UTR 50.0%
AACACCTTCTTCAGCGAGAC+TGG + tig0036750:361-380 Msa1455910:five_prime_UTR 50.0%
TGAGCCCACTGTTATCGATG+AGG + tig0036750:423-442 Msa1455910:five_prime_UTR 50.0%
CCTCACCTCATCGATAACAG+TGG - tig0036750:431-450 None:intergenic 50.0%
CCACTGTTATCGATGAGGTG+AGG + tig0036750:428-447 Msa1455910:five_prime_UTR 50.0%
GTTATCGATGAGGTGAGGAC+TGG + tig0036750:433-452 Msa1455910:five_prime_UTR 50.0%
AGGATGGAAGAGTTGGCGAT+AGG - tig0036750:461-480 None:intergenic 50.0%
ATGACCACGGGCAAAGTTGT+TGG - tig0036750:515-534 None:intergenic 50.0%
! GATAACTGCACTGGTCTCCA+AGG + tig0036750:688-707 Msa1455910:CDS 50.0%
!! CACTGGTCTCCAAGGGTTTT+TGG + tig0036750:696-715 Msa1455910:CDS 50.0%
AATGCTGTTGGAGGAGGAAC+TGG + tig0036750:724-743 Msa1455910:CDS 50.0%
CTCAAAGGAGCAGAGAACCA+AGG - tig0036750:756-775 None:intergenic 50.0%
AACAGAGGTGGAAACCTGAG+GGG - tig0036750:834-853 None:intergenic 50.0%
CAACAGAGGTGGAAACCTGA+GGG - tig0036750:835-854 None:intergenic 50.0%
ACAACAGAGGTGGAAACCTG+AGG - tig0036750:836-855 None:intergenic 50.0%
GTATGGCTCAACAACAGAGG+TGG - tig0036750:846-865 None:intergenic 50.0%
GTGGAGAGGACACTGTTGTA+TGG - tig0036750:863-882 None:intergenic 50.0%
AGTGGGACGCTTAATGTCGA+GGG - tig0036750:960-979 None:intergenic 50.0%
AAGTGGGACGCTTAATGTCG+AGG - tig0036750:961-980 None:intergenic 50.0%
!! GATAAGGGACCAAGTTGGTC+TGG - tig0036750:1197-1216 None:intergenic 50.0%
! TCTGGGATAAGGGACCAAGT+TGG - tig0036750:1202-1221 None:intergenic 50.0%
CCATGTACTTTCCATGGCGA+GGG - tig0036750:1350-1369 None:intergenic 50.0%
!! GCTTGCTGTTTGATGTACCG+AGG + tig0036750:1369-1388 Msa1455910:CDS 50.0%
GACAGCAGCATTCACATCCT+TGG - tig0036750:1406-1425 None:intergenic 50.0%
!! TTTGTGGATTGGTGCCCTAC+TGG + tig0036750:1456-1475 Msa1455910:CDS 50.0%
TCACCACCAGGAACAACAGT+AGG - tig0036750:1510-1529 None:intergenic 50.0%
GTGACCTTGCTAAGGTACAG+AGG + tig0036750:1526-1545 Msa1455910:CDS 50.0%
! ACAAGTGTGGCTGAGGTGTT+TGG + tig0036750:1573-1592 Msa1455910:CDS 50.0%
CCAGTGAACAAATGCACGCT+TGG - tig0036750:1631-1650 None:intergenic 50.0%
CCAAGCGTGCATTTGTTCAC+TGG + tig0036750:1628-1647 Msa1455910:CDS 50.0%
TGTTCACTGGTATGTGGGTG+AGG + tig0036750:1641-1660 Msa1455910:CDS 50.0%
GTTCACTGGTATGTGGGTGA+GGG + tig0036750:1642-1661 Msa1455910:CDS 50.0%
CAAAGCAGCAAGATCCTCAC+GGG - tig0036750:1694-1713 None:intergenic 50.0%
CCAAAGCAGCAAGATCCTCA+CGG - tig0036750:1695-1714 None:intergenic 50.0%
TGAGGGCGGTGATGAAGATA+TGG + tig0036750:1749-1768 Msa1455910:CDS 50.0%
GATTGGATGTTTGTGGACCG+TGG + tig0036750:1975-1994 Msa1455910:three_prime_UTR 50.0%
! CAGTCTTGTCACTCGGCATT+TGG - tig0036750:318-337 None:intergenic 50.0%
ATGCCGAGTGACAAGACTGT+TGG + tig0036750:319-338 Msa1455910:five_prime_UTR 50.0%
! CCTCCAACAGTCTTGTCACT+CGG - tig0036750:325-344 None:intergenic 50.0%
AGTGACAAGACTGTTGGAGG+CGG + tig0036750:325-344 Msa1455910:five_prime_UTR 50.0%
AACACCTTCTTCAGCGAGAC+TGG + tig0036750:361-380 Msa1455910:five_prime_UTR 50.0%
TGAGCCCACTGTTATCGATG+AGG + tig0036750:423-442 Msa1455910:five_prime_UTR 50.0%
CCTCACCTCATCGATAACAG+TGG - tig0036750:431-450 None:intergenic 50.0%
CCACTGTTATCGATGAGGTG+AGG + tig0036750:428-447 Msa1455910:five_prime_UTR 50.0%
GTTATCGATGAGGTGAGGAC+TGG + tig0036750:433-452 Msa1455910:five_prime_UTR 50.0%
AGGATGGAAGAGTTGGCGAT+AGG - tig0036750:461-480 None:intergenic 50.0%
ATGACCACGGGCAAAGTTGT+TGG - tig0036750:515-534 None:intergenic 50.0%
! GATAACTGCACTGGTCTCCA+AGG + tig0036750:688-707 Msa1455910:CDS 50.0%
!! CACTGGTCTCCAAGGGTTTT+TGG + tig0036750:696-715 Msa1455910:CDS 50.0%
AATGCTGTTGGAGGAGGAAC+TGG + tig0036750:724-743 Msa1455910:CDS 50.0%
CTCAAAGGAGCAGAGAACCA+AGG - tig0036750:756-775 None:intergenic 50.0%
AACAGAGGTGGAAACCTGAG+GGG - tig0036750:834-853 None:intergenic 50.0%
CAACAGAGGTGGAAACCTGA+GGG - tig0036750:835-854 None:intergenic 50.0%
ACAACAGAGGTGGAAACCTG+AGG - tig0036750:836-855 None:intergenic 50.0%
GTATGGCTCAACAACAGAGG+TGG - tig0036750:846-865 None:intergenic 50.0%
GTGGAGAGGACACTGTTGTA+TGG - tig0036750:863-882 None:intergenic 50.0%
AGTGGGACGCTTAATGTCGA+GGG - tig0036750:960-979 None:intergenic 50.0%
AAGTGGGACGCTTAATGTCG+AGG - tig0036750:961-980 None:intergenic 50.0%
!! GATAAGGGACCAAGTTGGTC+TGG - tig0036750:1197-1216 None:intergenic 50.0%
! TCTGGGATAAGGGACCAAGT+TGG - tig0036750:1202-1221 None:intergenic 50.0%
CCATGTACTTTCCATGGCGA+GGG - tig0036750:1350-1369 None:intergenic 50.0%
!! GCTTGCTGTTTGATGTACCG+AGG + tig0036750:1369-1388 Msa1455910:CDS 50.0%
GACAGCAGCATTCACATCCT+TGG - tig0036750:1406-1425 None:intergenic 50.0%
!! TTTGTGGATTGGTGCCCTAC+TGG + tig0036750:1456-1475 Msa1455910:CDS 50.0%
TCACCACCAGGAACAACAGT+AGG - tig0036750:1510-1529 None:intergenic 50.0%
GTGACCTTGCTAAGGTACAG+AGG + tig0036750:1526-1545 Msa1455910:CDS 50.0%
! ACAAGTGTGGCTGAGGTGTT+TGG + tig0036750:1573-1592 Msa1455910:CDS 50.0%
CCAGTGAACAAATGCACGCT+TGG - tig0036750:1631-1650 None:intergenic 50.0%
CCAAGCGTGCATTTGTTCAC+TGG + tig0036750:1628-1647 Msa1455910:CDS 50.0%
TGTTCACTGGTATGTGGGTG+AGG + tig0036750:1641-1660 Msa1455910:CDS 50.0%
GTTCACTGGTATGTGGGTGA+GGG + tig0036750:1642-1661 Msa1455910:CDS 50.0%
CAAAGCAGCAAGATCCTCAC+GGG - tig0036750:1694-1713 None:intergenic 50.0%
CCAAAGCAGCAAGATCCTCA+CGG - tig0036750:1695-1714 None:intergenic 50.0%
TGAGGGCGGTGATGAAGATA+TGG + tig0036750:1749-1768 Msa1455910:CDS 50.0%
GATTGGATGTTTGTGGACCG+TGG + tig0036750:1975-1994 Msa1455910:three_prime_UTR 50.0%
TCACTCGGCATTTGGCCATC+AGG - tig0036750:310-329 None:intergenic 55.0%
CCGAGTGACAAGACTGTTGG+AGG + tig0036750:322-341 Msa1455910:five_prime_UTR 55.0%
AGCACCAGTCTCGCTGAAGA+AGG - tig0036750:368-387 None:intergenic 55.0%
TTCTTCAGCGAGACTGGTGC+TGG + tig0036750:367-386 Msa1455910:five_prime_UTR 55.0%
GCTGCTCAGGATGGAAGAGT+TGG - tig0036750:468-487 None:intergenic 55.0%
CACTGATGAGCTGCTCAGGA+TGG - tig0036750:477-496 None:intergenic 55.0%
CATCCTGAGCAGCTCATCAG+TGG + tig0036750:475-494 Msa1455910:five_prime_UTR 55.0%
TTGCCACTGATGAGCTGCTC+AGG - tig0036750:481-500 None:intergenic 55.0%
ACCACGGGCAAAGTTGTTGG+CGG - tig0036750:512-531 None:intergenic 55.0%
! GTTGGAGGAGGAACTGGTTC+TGG + tig0036750:730-749 Msa1455910:CDS 55.0%
TACTGTCTATCCCTCCCCTC+AGG + tig0036750:817-836 Msa1455910:CDS 55.0%
AGTGTGCTCCAAGAGGGAGT+GGG - tig0036750:885-904 None:intergenic 55.0%
! CCCTCGCCATGGAAAGTACA+TGG + tig0036750:1347-1366 Msa1455910:CDS 55.0%
GCCATGTACTTTCCATGGCG+AGG - tig0036750:1351-1370 None:intergenic 55.0%
CCTTGGGAACAACATCGCCT+CGG - tig0036750:1389-1408 None:intergenic 55.0%
CAGCCACCTACTGTTGTTCC+TGG + tig0036750:1501-1520 Msa1455910:CDS 55.0%
CCACCAGGAACAACAGTAGG+TGG - tig0036750:1507-1526 None:intergenic 55.0%
CCACCTACTGTTGTTCCTGG+TGG + tig0036750:1504-1523 Msa1455910:CDS 55.0%
! TCCTGGTGGTGACCTTGCTA+AGG + tig0036750:1518-1537 Msa1455910:CDS 55.0%
ACCTTAGCAAGGTCACCACC+AGG - tig0036750:1522-1541 None:intergenic 55.0%
CTGCCCTCTGTACCTTAGCA+AGG - tig0036750:1533-1552 None:intergenic 55.0%
CTGGTATGTGGGTGAGGGTA+TGG + tig0036750:1647-1666 Msa1455910:CDS 55.0%
! GTGGGTGAGGGTATGGAAGA+AGG + tig0036750:1654-1673 Msa1455910:CDS 55.0%
! CCGTGAGGATCTTGCTGCTT+TGG + tig0036750:1692-1711 Msa1455910:CDS 55.0%
!! GAAGAAGTTGGTGCCGAGTC+TGG + tig0036750:1726-1745 Msa1455910:CDS 55.0%
TCACTCGGCATTTGGCCATC+AGG - tig0036750:310-329 None:intergenic 55.0%
CCGAGTGACAAGACTGTTGG+AGG + tig0036750:322-341 Msa1455910:five_prime_UTR 55.0%
AGCACCAGTCTCGCTGAAGA+AGG - tig0036750:368-387 None:intergenic 55.0%
TTCTTCAGCGAGACTGGTGC+TGG + tig0036750:367-386 Msa1455910:five_prime_UTR 55.0%
GCTGCTCAGGATGGAAGAGT+TGG - tig0036750:468-487 None:intergenic 55.0%
CACTGATGAGCTGCTCAGGA+TGG - tig0036750:477-496 None:intergenic 55.0%
CATCCTGAGCAGCTCATCAG+TGG + tig0036750:475-494 Msa1455910:five_prime_UTR 55.0%
TTGCCACTGATGAGCTGCTC+AGG - tig0036750:481-500 None:intergenic 55.0%
ACCACGGGCAAAGTTGTTGG+CGG - tig0036750:512-531 None:intergenic 55.0%
! GTTGGAGGAGGAACTGGTTC+TGG + tig0036750:730-749 Msa1455910:CDS 55.0%
TACTGTCTATCCCTCCCCTC+AGG + tig0036750:817-836 Msa1455910:CDS 55.0%
AGTGTGCTCCAAGAGGGAGT+GGG - tig0036750:885-904 None:intergenic 55.0%
! CCCTCGCCATGGAAAGTACA+TGG + tig0036750:1347-1366 Msa1455910:CDS 55.0%
GCCATGTACTTTCCATGGCG+AGG - tig0036750:1351-1370 None:intergenic 55.0%
CCTTGGGAACAACATCGCCT+CGG - tig0036750:1389-1408 None:intergenic 55.0%
CAGCCACCTACTGTTGTTCC+TGG + tig0036750:1501-1520 Msa1455910:CDS 55.0%
CCACCAGGAACAACAGTAGG+TGG - tig0036750:1507-1526 None:intergenic 55.0%
CCACCTACTGTTGTTCCTGG+TGG + tig0036750:1504-1523 Msa1455910:CDS 55.0%
! TCCTGGTGGTGACCTTGCTA+AGG + tig0036750:1518-1537 Msa1455910:CDS 55.0%
ACCTTAGCAAGGTCACCACC+AGG - tig0036750:1522-1541 None:intergenic 55.0%
CTGCCCTCTGTACCTTAGCA+AGG - tig0036750:1533-1552 None:intergenic 55.0%
CTGGTATGTGGGTGAGGGTA+TGG + tig0036750:1647-1666 Msa1455910:CDS 55.0%
! GTGGGTGAGGGTATGGAAGA+AGG + tig0036750:1654-1673 Msa1455910:CDS 55.0%
! CCGTGAGGATCTTGCTGCTT+TGG + tig0036750:1692-1711 Msa1455910:CDS 55.0%
!! GAAGAAGTTGGTGCCGAGTC+TGG + tig0036750:1726-1745 Msa1455910:CDS 55.0%
!! GGAGGAACTGGTTCTGGCCT+TGG + tig0036750:736-755 Msa1455910:CDS 60.0%
GAGGTGGAAACCTGAGGGGA+GGG - tig0036750:830-849 None:intergenic 60.0%
AGAGGTGGAAACCTGAGGGG+AGG - tig0036750:831-850 None:intergenic 60.0%
CAGTGTGCTCCAAGAGGGAG+TGG - tig0036750:886-905 None:intergenic 60.0%
GCTAAGTGTGACCCTCGCCA+TGG + tig0036750:1336-1355 Msa1455910:CDS 60.0%
CCGAGGCGATGTTGTTCCCA+AGG + tig0036750:1386-1405 Msa1455910:CDS 60.0%
!! AGTTGGTGCCGAGTCTGGTG+AGG + tig0036750:1731-1750 Msa1455910:CDS 60.0%
!! GTTGGTGCCGAGTCTGGTGA+GGG + tig0036750:1732-1751 Msa1455910:CDS 60.0%
ATCACCGCCCTCACCAGACT+CGG - tig0036750:1742-1761 None:intergenic 60.0%
!! GGAGGAACTGGTTCTGGCCT+TGG + tig0036750:736-755 Msa1455910:CDS 60.0%
GAGGTGGAAACCTGAGGGGA+GGG - tig0036750:830-849 None:intergenic 60.0%
AGAGGTGGAAACCTGAGGGG+AGG - tig0036750:831-850 None:intergenic 60.0%
CAGTGTGCTCCAAGAGGGAG+TGG - tig0036750:886-905 None:intergenic 60.0%
GCTAAGTGTGACCCTCGCCA+TGG + tig0036750:1336-1355 Msa1455910:CDS 60.0%
CCGAGGCGATGTTGTTCCCA+AGG + tig0036750:1386-1405 Msa1455910:CDS 60.0%
!! AGTTGGTGCCGAGTCTGGTG+AGG + tig0036750:1731-1750 Msa1455910:CDS 60.0%
!! GTTGGTGCCGAGTCTGGTGA+GGG + tig0036750:1732-1751 Msa1455910:CDS 60.0%
ATCACCGCCCTCACCAGACT+CGG - tig0036750:1742-1761 None:intergenic 60.0%
GCCGCCAACAACTTTGCCCG+TGG + tig0036750:508-527 Msa1455910:CDS 65.0%
CCAAGAGGGAGTGGGTGGAG+AGG - tig0036750:877-896 None:intergenic 65.0%
CCTCTCCACCCACTCCCTCT+TGG + tig0036750:874-893 Msa1455910:CDS 65.0%
GTGCTCCAAGAGGGAGTGGG+TGG - tig0036750:882-901 None:intergenic 65.0%
GCCGCCAACAACTTTGCCCG+TGG + tig0036750:508-527 Msa1455910:CDS 65.0%
CCAAGAGGGAGTGGGTGGAG+AGG - tig0036750:877-896 None:intergenic 65.0%
CCTCTCCACCCACTCCCTCT+TGG + tig0036750:874-893 Msa1455910:CDS 65.0%
GTGCTCCAAGAGGGAGTGGG+TGG - tig0036750:882-901 None:intergenic 65.0%
! GGTGCCGAGTCTGGTGAGGG+CGG + tig0036750:1735-1754 Msa1455910:CDS 70.0%
! GGTGCCGAGTCTGGTGAGGG+CGG + tig0036750:1735-1754 Msa1455910:CDS 70.0%
Chromosome Type Strat End Strand Name
tig0036750 gene 307 2121 307 ID=Msa1455910;Name=Msa1455910
tig0036750 mRNA 307 2121 307 ID=Msa1455910-mRNA-1;Parent=Msa1455910;Name=Msa1455910-mRNA-1;_AED=0.04;_eAED=0.04;_QI=199|1|1|1|0.5|0.66|3|339|353
tig0036750 exon 307 541 307 ID=Msa1455910-mRNA-1:exon:20460;Parent=Msa1455910-mRNA-1
tig0036750 exon 638 1009 638 ID=Msa1455910-mRNA-1:exon:20461;Parent=Msa1455910-mRNA-1
tig0036750 exon 1129 2121 1129 ID=Msa1455910-mRNA-1:exon:20462;Parent=Msa1455910-mRNA-1
tig0036750 five_prime_UTR 307 505 307 ID=Msa1455910-mRNA-1:five_prime_utr;Parent=Msa1455910-mRNA-1
tig0036750 CDS 506 541 506 ID=Msa1455910-mRNA-1:cds;Parent=Msa1455910-mRNA-1
tig0036750 CDS 638 1009 638 ID=Msa1455910-mRNA-1:cds;Parent=Msa1455910-mRNA-1
tig0036750 CDS 1129 1782 1129 ID=Msa1455910-mRNA-1:cds;Parent=Msa1455910-mRNA-1
tig0036750 three_prime_UTR 1783 2121 1783 ID=Msa1455910-mRNA-1:three_prime_utr;Parent=Msa1455910-mRNA-1
Gene Sequence

>Msa1455910

ATGCCGCCAACAACTTTGCCCGTGGTCATTATACCATTGGGAAAGAGATCGTTGATCTGTGTTTGGACCGCATCAGAAAGCTTGCTGATAACTGCACTGGTCTCCAAGGGTTTTTGGTTTTCAATGCTGTTGGAGGAGGAACTGGTTCTGGCCTTGGTTCTCTGCTCCTTTGAGCGTCTGTCTGTTGATTATGGAAAGAAATCCAAGCTTGGGTTTACTGTCTATCCCTCCCCTCAGGTTTCCACCTCTGTTGTTGAGCCATACAACAGTGTCCTCTCCACCCACTCCCTCTTGGAGCACACTGATGTTACTGTTCTTCTGGACAATGAAGCTATCTATGACATCTGTAGGCGCTCCCTCGACATTAAGCGTCCCACTTACACCAACCTTAACCGTCTTGTTTCTCAGGTGATTTCATCCTTGTCTGCTTCTTTGAGGTTTGATGGTGCTCTCAATGTTGATGTGACTGAATTCCAGACCAACTTGGTCCCTTATCCCAGAATCCATTTCATGCTTTCTTCATATGCTCCAGTTATATCTGCTGAGAAAGCTTATCACGAGCAGCTTTCAGTTGCTGAAATTACCAACAGTGCTTTTGAGCCATCATCTATAATGGCTAAGTGTGACCCTCGCCATGGAAAGTACATGGCTTGCTGTTTGATGTACCGAGGCGATGTTGTTCCCAAGGATGTGAATGCTGCTGTCGCTACAATCAAAACCAAGAGGACCATTCAGTTTGTGGATTGGTGCCCTACTGGTTTCAAATGTGGTATTAACTATCAGCCACCTACTGTTGTTCCTGGTGGTGACCTTGCTAAGGTACAGAGGGCAGTTTGCATGATTTCAAACTCAACAAGTGTGGCTGAGGTGTTTGGTCACATTGATCACAAGTTTGATCTGATGTATGCCAAGCGTGCATTTGTTCACTGGTATGTGGGTGAGGGTATGGAAGAAGGAGAATTTTCTGAAGCCCGTGAGGATCTTGCTGCTTTGGAAAAGGATTATGAAGAAGTTGGTGCCGAGTCTGGTGAGGGCGGTGATGAAGATATGGATGACTACTAG
Protein sequence

>Msa1455910

MPPTTLPVVIIPLGKRSLICVWTASESLLITALVSKGFWFSMLLEEELVLALVLCSFERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVTVLLDNEAIYDICRRSLDIKRPTYTNLNRLVSQVISSLSASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSIMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFGHIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESGEGGDEDMDDY*