Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0279000 | XP_013463000.1 | 97.039 | 439 | 11 | 1 | 1 | 437 | 1 | 439 | 0.0 | 860 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0279000 | sp|Q9SV43|PLP7_ARATH | 48.630 | 438 | 196 | 7 | 2 | 412 | 32 | 467 | 2.06e-134 | 398 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0279000 | A0A072VFU2 | 97.039 | 439 | 11 | 1 | 1 | 437 | 1 | 439 | 0.0 | 860 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001800 | Msa0279000 | 0.865629 | 5.141612e-65 | -8.615850e-47 |
| Msa0006840 | Msa0279000 | 0.809391 | 1.937049e-50 | -8.615850e-47 |
| Msa0013270 | Msa0279000 | 0.830997 | 2.143030e-55 | -8.615850e-47 |
| Msa0025570 | Msa0279000 | 0.820625 | 6.214291e-53 | -8.615850e-47 |
| Msa0035730 | Msa0279000 | 0.813699 | 2.242952e-51 | -8.615850e-47 |
| Msa0036810 | Msa0279000 | 0.830708 | 2.522592e-55 | -8.615850e-47 |
| Msa0037050 | Msa0279000 | 0.807900 | 4.031400e-50 | -8.615850e-47 |
| Msa0039750 | Msa0279000 | 0.824730 | 6.888788e-54 | -8.615850e-47 |
| Msa0044780 | Msa0279000 | -0.806979 | 6.324399e-50 | -8.615850e-47 |
| Msa0045620 | Msa0279000 | 0.814040 | 1.886094e-51 | -8.615850e-47 |
| Msa0045810 | Msa0279000 | 0.823962 | 1.043992e-53 | -8.615850e-47 |
| Msa0046200 | Msa0279000 | 0.820106 | 8.173973e-53 | -8.615850e-47 |
| Msa0046970 | Msa0279000 | 0.825801 | 3.845478e-54 | -8.615850e-47 |
| Msa0057860 | Msa0279000 | 0.824880 | 6.352069e-54 | -8.615850e-47 |
| Msa0062190 | Msa0279000 | 0.803535 | 3.328160e-49 | -8.615850e-47 |
| Msa0073110 | Msa0279000 | 0.813782 | 2.149658e-51 | -8.615850e-47 |
| Msa0075840 | Msa0279000 | 0.835386 | 1.729295e-56 | -8.615850e-47 |
| Msa0078130 | Msa0279000 | 0.811456 | 6.937348e-51 | -8.615850e-47 |
| Msa0080370 | Msa0279000 | 0.804298 | 2.310658e-49 | -8.615850e-47 |
| Msa0091090 | Msa0279000 | -0.807087 | 5.997422e-50 | -8.615850e-47 |
| Msa0092220 | Msa0279000 | 0.804105 | 2.534245e-49 | -8.615850e-47 |
| Msa0100890 | Msa0279000 | 0.804938 | 1.699098e-49 | -8.615850e-47 |
| Msa0102920 | Msa0279000 | 0.800083 | 1.702070e-48 | -8.615850e-47 |
| Msa0106540 | Msa0279000 | 0.819626 | 1.052090e-52 | -8.615850e-47 |
| Msa0118150 | Msa0279000 | 0.807639 | 4.580832e-50 | -8.615850e-47 |
| Msa0121320 | Msa0279000 | 0.821038 | 4.992347e-53 | -8.615850e-47 |
| Msa0131810 | Msa0279000 | 0.804867 | 1.757807e-49 | -8.615850e-47 |
| Msa0139500 | Msa0279000 | 0.812755 | 3.614530e-51 | -8.615850e-47 |
| Msa0143590 | Msa0279000 | 0.822610 | 2.160688e-53 | -8.615850e-47 |
| Msa0147680 | Msa0279000 | 0.817790 | 2.747328e-52 | -8.615850e-47 |
| Msa0160380 | Msa0279000 | 0.805197 | 1.499407e-49 | -8.615850e-47 |
| Msa0164170 | Msa0279000 | 0.809552 | 1.788860e-50 | -8.615850e-47 |
| Msa0166180 | Msa0279000 | 0.838633 | 2.561083e-57 | -8.615850e-47 |
| Msa0168380 | Msa0279000 | 0.811725 | 6.064168e-51 | -8.615850e-47 |
| Msa0173250 | Msa0279000 | 0.821845 | 3.251741e-53 | -8.615850e-47 |
| Msa0195230 | Msa0279000 | 0.963394 | 4.959105e-122 | -8.615850e-47 |
| Msa0195260 | Msa0279000 | 0.967793 | 9.070571e-128 | -8.615850e-47 |
| Msa0203080 | Msa0279000 | 0.835106 | 2.035058e-56 | -8.615850e-47 |
| Msa0206370 | Msa0279000 | 0.821057 | 4.942843e-53 | -8.615850e-47 |
| Msa0211460 | Msa0279000 | 0.835291 | 1.828142e-56 | -8.615850e-47 |
| Msa0225070 | Msa0279000 | -0.810744 | 9.896197e-51 | -8.615850e-47 |
| Msa0234170 | Msa0279000 | 0.841637 | 4.211812e-58 | -8.615850e-47 |
| Msa0240540 | Msa0279000 | 0.918459 | 1.518469e-86 | -8.615850e-47 |
| Msa0240590 | Msa0279000 | -0.801751 | 7.766077e-49 | -8.615850e-47 |
| Msa0246210 | Msa0279000 | 0.806558 | 7.761632e-50 | -8.615850e-47 |
| Msa0248410 | Msa0279000 | 0.810296 | 1.236867e-50 | -8.615850e-47 |
| Msa0260980 | Msa0279000 | 0.820645 | 6.148155e-53 | -8.615850e-47 |
| Msa0267450 | Msa0279000 | -0.800843 | 1.191734e-48 | -8.615850e-47 |
| Msa0267510 | Msa0279000 | -0.800929 | 1.144350e-48 | -8.615850e-47 |
| Msa0276850 | Msa0279000 | 0.839154 | 1.877961e-57 | -8.615850e-47 |
| Msa0276860 | Msa0279000 | 0.851592 | 8.027269e-61 | -8.615850e-47 |
| Msa0279000 | Msa0290800 | 0.845309 | 4.401513e-59 | -8.615850e-47 |
| Msa0279000 | Msa0307430 | 0.828936 | 6.811894e-55 | -8.615850e-47 |
| Msa0279000 | Msa0316000 | 0.804090 | 2.551991e-49 | -8.615850e-47 |
| Msa0279000 | Msa0316020 | 0.800554 | 1.364934e-48 | -8.615850e-47 |
| Msa0279000 | Msa0318410 | 0.840719 | 7.339954e-58 | -8.615850e-47 |
| Msa0279000 | Msa0318490 | 0.805446 | 1.329540e-49 | -8.615850e-47 |
| Msa0279000 | Msa0328870 | 0.838883 | 2.207081e-57 | -8.615850e-47 |
| Msa0279000 | Msa0349930 | 0.814006 | 1.919040e-51 | -8.615850e-47 |
| Msa0279000 | Msa0354840 | 0.812784 | 3.561271e-51 | -8.615850e-47 |
| Msa0279000 | Msa0368640 | 0.838659 | 2.521273e-57 | -8.615850e-47 |
| Msa0279000 | Msa0379480 | 0.804965 | 1.676997e-49 | -8.615850e-47 |
| Msa0279000 | Msa0386880 | 0.843756 | 1.152133e-58 | -8.615850e-47 |
| Msa0279000 | Msa0386910 | 0.803921 | 2.767897e-49 | -8.615850e-47 |
| Msa0279000 | Msa0388210 | 0.817412 | 3.342753e-52 | -8.615850e-47 |
| Msa0279000 | Msa0389690 | 0.822405 | 2.410802e-53 | -8.615850e-47 |
| Msa0279000 | Msa0402770 | 0.850818 | 1.327675e-60 | -8.615850e-47 |
| Msa0279000 | Msa0418100 | 0.806685 | 7.295366e-50 | -8.615850e-47 |
| Msa0279000 | Msa0427420 | 0.845480 | 3.957144e-59 | -8.615850e-47 |
| Msa0279000 | Msa0427480 | 0.844924 | 5.591944e-59 | -8.615850e-47 |
| Msa0279000 | Msa0433630 | 0.825961 | 3.522063e-54 | -8.615850e-47 |
| Msa0279000 | Msa0436100 | 0.836532 | 8.856288e-57 | -8.615850e-47 |
| Msa0279000 | Msa0437480 | 0.808731 | 2.681216e-50 | -8.615850e-47 |
| Msa0279000 | Msa0444380 | 0.801521 | 8.656818e-49 | -8.615850e-47 |
| Msa0279000 | Msa0447870 | 0.800882 | 1.169685e-48 | -8.615850e-47 |
| Msa0279000 | Msa0457070 | -0.805612 | 1.227469e-49 | -8.615850e-47 |
| Msa0279000 | Msa0458100 | 0.844606 | 6.813502e-59 | -8.615850e-47 |
| Msa0279000 | Msa0466440 | 0.830640 | 2.620945e-55 | -8.615850e-47 |
| Msa0279000 | Msa0467170 | 0.802675 | 5.011917e-49 | -8.615850e-47 |
| Msa0279000 | Msa0467330 | 0.810559 | 1.085328e-50 | -8.615850e-47 |
| Msa0279000 | Msa0468390 | 0.811333 | 7.377051e-51 | -8.615850e-47 |
| Msa0279000 | Msa0471390 | 0.815989 | 6.969041e-52 | -8.615850e-47 |
| Msa0279000 | Msa0477480 | 0.803679 | 3.106651e-49 | -8.615850e-47 |
| Msa0279000 | Msa0480280 | 0.807303 | 5.397737e-50 | -8.615850e-47 |
| Msa0279000 | Msa0481670 | 0.836634 | 8.341060e-57 | -8.615850e-47 |
| Msa0279000 | Msa0484210 | -0.807202 | 5.671459e-50 | -8.615850e-47 |
| Msa0279000 | Msa0506750 | 0.853747 | 1.947595e-61 | -8.615850e-47 |
| Msa0279000 | Msa0515760 | 0.803740 | 3.017180e-49 | -8.615850e-47 |
| Msa0279000 | Msa0518530 | 0.809338 | 1.988363e-50 | -8.615850e-47 |
| Msa0279000 | Msa0521510 | 0.820550 | 6.466488e-53 | -8.615850e-47 |
| Msa0279000 | Msa0521530 | 0.826564 | 2.531374e-54 | -8.615850e-47 |
| Msa0279000 | Msa0523720 | 0.800149 | 1.650311e-48 | -8.615850e-47 |
| Msa0279000 | Msa0525880 | 0.805415 | 1.349493e-49 | -8.615850e-47 |
| Msa0279000 | Msa0549900 | 0.800600 | 1.335521e-48 | -8.615850e-47 |
| Msa0279000 | Msa0555280 | 0.815883 | 7.356514e-52 | -8.615850e-47 |
| Msa0279000 | Msa0567330 | 0.830787 | 2.411887e-55 | -8.615850e-47 |
| Msa0279000 | Msa0567570 | 0.822902 | 1.847445e-53 | -8.615850e-47 |
| Msa0279000 | Msa0567610 | 0.822986 | 1.765580e-53 | -8.615850e-47 |
| Msa0279000 | Msa0568460 | -0.808453 | 3.074660e-50 | -8.615850e-47 |
| Msa0279000 | Msa0574900 | 0.835757 | 1.393107e-56 | -8.615850e-47 |
| Msa0279000 | Msa0576320 | 0.836187 | 1.083998e-56 | -8.615850e-47 |
| Msa0279000 | Msa0579080 | 0.804990 | 1.656919e-49 | -8.615850e-47 |
| Msa0279000 | Msa0590000 | 0.804493 | 2.103399e-49 | -8.615850e-47 |
| Msa0279000 | Msa0601380 | 0.819999 | 8.647390e-53 | -8.615850e-47 |
| Msa0279000 | Msa0605530 | 0.879339 | 1.350535e-69 | -8.615850e-47 |
| Msa0279000 | Msa0606120 | 0.827275 | 1.711633e-54 | -8.615850e-47 |
| Msa0279000 | Msa0608820 | 0.834226 | 3.386993e-56 | -8.615850e-47 |
| Msa0279000 | Msa0610700 | -0.815431 | 9.279964e-52 | -8.615850e-47 |
| Msa0279000 | Msa0617940 | 0.808955 | 2.401811e-50 | -8.615850e-47 |
| Msa0279000 | Msa0618840 | 0.828543 | 8.478271e-55 | -8.615850e-47 |
| Msa0279000 | Msa0618990 | 0.827441 | 1.562104e-54 | -8.615850e-47 |
| Msa0279000 | Msa0623310 | 0.808306 | 3.303901e-50 | -8.615850e-47 |
| Msa0279000 | Msa0630440 | 0.828782 | 7.423554e-55 | -8.615850e-47 |
| Msa0279000 | Msa0642550 | 0.832159 | 1.108305e-55 | -8.615850e-47 |
| Msa0279000 | Msa0647300 | 0.804135 | 2.498297e-49 | -8.615850e-47 |
| Msa0279000 | Msa0659020 | -0.831051 | 2.077913e-55 | -8.615850e-47 |
| Msa0279000 | Msa0661480 | 0.825362 | 4.886079e-54 | -8.615850e-47 |
| Msa0279000 | Msa0663290 | 0.800812 | 1.208946e-48 | -8.615850e-47 |
| Msa0279000 | Msa0686830 | 0.803524 | 3.345244e-49 | -8.615850e-47 |
| Msa0279000 | Msa0689660 | 0.803066 | 4.162709e-49 | -8.615850e-47 |
| Msa0279000 | Msa0689830 | 0.856619 | 2.846808e-62 | -8.615850e-47 |
| Msa0279000 | Msa0691610 | 0.831920 | 1.269527e-55 | -8.615850e-47 |
| Msa0279000 | Msa0704690 | 0.831225 | 1.883337e-55 | -8.615850e-47 |
| Msa0279000 | Msa0707360 | 0.828996 | 6.588362e-55 | -8.615850e-47 |
| Msa0279000 | Msa0708980 | 0.813388 | 2.624869e-51 | -8.615850e-47 |
| Msa0279000 | Msa0713080 | 0.823799 | 1.139953e-53 | -8.615850e-47 |
| Msa0279000 | Msa0719270 | 0.800102 | 1.687349e-48 | -8.615850e-47 |
| Msa0279000 | Msa0732970 | 0.854321 | 1.330727e-61 | -8.615850e-47 |
| Msa0279000 | Msa0745140 | 0.810301 | 1.234142e-50 | -8.615850e-47 |
| Msa0279000 | Msa0746650 | 0.854456 | 1.216040e-61 | -8.615850e-47 |
| Msa0279000 | Msa0761830 | 0.823501 | 1.338910e-53 | -8.615850e-47 |
| Msa0279000 | Msa0764770 | 0.812952 | 3.272055e-51 | -8.615850e-47 |
| Msa0279000 | Msa0772220 | 0.806029 | 1.003211e-49 | -8.615850e-47 |
| Msa0279000 | Msa0773960 | 0.879254 | 1.448193e-69 | -8.615850e-47 |
| Msa0279000 | Msa0776640 | 0.810126 | 1.345847e-50 | -8.615850e-47 |
| Msa0279000 | Msa0799450 | 0.834025 | 3.805057e-56 | -8.615850e-47 |
| Msa0279000 | Msa0804170 | 0.835591 | 1.535113e-56 | -8.615850e-47 |
| Msa0279000 | Msa0825920 | 0.814470 | 1.515961e-51 | -8.615850e-47 |
| Msa0279000 | Msa0827370 | 0.810540 | 1.095748e-50 | -8.615850e-47 |
| Msa0279000 | Msa0835750 | 0.809935 | 1.479389e-50 | -8.615850e-47 |
| Msa0279000 | Msa0837710 | 0.838086 | 3.543881e-57 | -8.615850e-47 |
| Msa0279000 | Msa0838620 | -0.813878 | 2.048443e-51 | -8.615850e-47 |
| Msa0279000 | Msa0846900 | 0.833585 | 4.900213e-56 | -8.615850e-47 |
| Msa0279000 | Msa0861440 | 0.807807 | 4.219870e-50 | -8.615850e-47 |
| Msa0279000 | Msa0865420 | 0.805875 | 1.080944e-49 | -8.615850e-47 |
| Msa0279000 | Msa0880910 | 0.824027 | 1.008347e-53 | -8.615850e-47 |
| Msa0279000 | Msa0903340 | 0.804234 | 2.381728e-49 | -8.615850e-47 |
| Msa0279000 | Msa0930770 | 0.891812 | 2.822315e-74 | -8.615850e-47 |
| Msa0279000 | Msa0931680 | 0.801579 | 8.422406e-49 | -8.615850e-47 |
| Msa0279000 | Msa0932140 | 0.805898 | 1.068518e-49 | -8.615850e-47 |
| Msa0279000 | Msa0932150 | 0.809641 | 1.711786e-50 | -8.615850e-47 |
| Msa0279000 | Msa0945900 | 0.822739 | 2.016416e-53 | -8.615850e-47 |
| Msa0279000 | Msa0967780 | 0.830834 | 2.349064e-55 | -8.615850e-47 |
| Msa0279000 | Msa0967900 | -0.803999 | 2.665629e-49 | -8.615850e-47 |
| Msa0279000 | Msa0970270 | 0.800811 | 1.209938e-48 | -8.615850e-47 |
| Msa0279000 | Msa0981670 | 0.842673 | 2.239408e-58 | -8.615850e-47 |
| Msa0279000 | Msa0982730 | 0.859041 | 5.441280e-63 | -8.615850e-47 |
| Msa0279000 | Msa1002820 | 0.827109 | 1.875997e-54 | -8.615850e-47 |
| Msa0279000 | Msa1013190 | 0.822540 | 2.243085e-53 | -8.615850e-47 |
| Msa0279000 | Msa1019200 | 0.833844 | 4.222196e-56 | -8.615850e-47 |
| Msa0279000 | Msa1021560 | 0.859420 | 4.188119e-63 | -8.615850e-47 |
| Msa0279000 | Msa1022420 | 0.809957 | 1.463869e-50 | -8.615850e-47 |
| Msa0279000 | Msa1024570 | 0.819037 | 1.433040e-52 | -8.615850e-47 |
| Msa0279000 | Msa1029820 | 0.827746 | 1.319667e-54 | -8.615850e-47 |
| Msa0279000 | Msa1029840 | 0.813911 | 2.013859e-51 | -8.615850e-47 |
| Msa0279000 | Msa1041060 | 0.800502 | 1.398489e-48 | -8.615850e-47 |
| Msa0279000 | Msa1041170 | 0.843598 | 1.269449e-58 | -8.615850e-47 |
| Msa0279000 | Msa1042300 | 0.817361 | 3.431963e-52 | -8.615850e-47 |
| Msa0279000 | Msa1050260 | 0.823393 | 1.419399e-53 | -8.615850e-47 |
| Msa0279000 | Msa1057620 | -0.801318 | 9.527201e-49 | -8.615850e-47 |
| Msa0279000 | Msa1068710 | 0.837008 | 6.696422e-57 | -8.615850e-47 |
| Msa0279000 | Msa1068730 | 0.823816 | 1.129829e-53 | -8.615850e-47 |
| Msa0279000 | Msa1068940 | 0.824812 | 6.588114e-54 | -8.615850e-47 |
| Msa0279000 | Msa1105540 | 0.831183 | 1.928745e-55 | -8.615850e-47 |
| Msa0279000 | Msa1105580 | 0.833771 | 4.403563e-56 | -8.615850e-47 |
| Msa0279000 | Msa1115600 | 0.805933 | 1.050578e-49 | -8.615850e-47 |
| Msa0279000 | Msa1118170 | 0.804310 | 2.296743e-49 | -8.615850e-47 |
| Msa0279000 | Msa1119440 | 0.804875 | 1.751265e-49 | -8.615850e-47 |
| Msa0279000 | Msa1124210 | 0.845150 | 4.860200e-59 | -8.615850e-47 |
| Msa0279000 | Msa1133440 | -0.802660 | 5.049844e-49 | -8.615850e-47 |
| Msa0279000 | Msa1147010 | 0.802133 | 6.483630e-49 | -8.615850e-47 |
| Msa0279000 | Msa1147700 | 0.815591 | 8.546772e-52 | -8.615850e-47 |
| Msa0279000 | Msa1148930 | 0.849463 | 3.182980e-60 | -8.615850e-47 |
| Msa0279000 | Msa1149910 | 0.805808 | 1.116101e-49 | -8.615850e-47 |
| Msa0279000 | Msa1156710 | 0.812153 | 4.891472e-51 | -8.615850e-47 |
| Msa0279000 | Msa1156730 | 0.815658 | 8.260117e-52 | -8.615850e-47 |
| Msa0279000 | Msa1158210 | 0.804327 | 2.278448e-49 | -8.615850e-47 |
| Msa0279000 | Msa1165460 | 0.807134 | 5.862251e-50 | -8.615850e-47 |
| Msa0279000 | Msa1165880 | 0.817737 | 2.823029e-52 | -8.615850e-47 |
| Msa0279000 | Msa1168310 | 0.813609 | 2.347581e-51 | -8.615850e-47 |
| Msa0279000 | Msa1184680 | 0.819648 | 1.040069e-52 | -8.615850e-47 |
| Msa0279000 | Msa1188340 | 0.814139 | 1.793938e-51 | -8.615850e-47 |
| Msa0279000 | Msa1190770 | 0.802772 | 4.786587e-49 | -8.615850e-47 |
| Msa0279000 | Msa1192340 | 0.812862 | 3.424972e-51 | -8.615850e-47 |
| Msa0279000 | Msa1199850 | 0.824747 | 6.825505e-54 | -8.615850e-47 |
| Msa0279000 | Msa1201170 | 0.828086 | 1.093275e-54 | -8.615850e-47 |
| Msa0279000 | Msa1201780 | 0.802687 | 4.984418e-49 | -8.615850e-47 |
| Msa0279000 | Msa1205270 | -0.813618 | 2.336480e-51 | -8.615850e-47 |
| Msa0279000 | Msa1206040 | 0.802519 | 5.399594e-49 | -8.615850e-47 |
| Msa0279000 | Msa1217890 | 0.837057 | 6.507051e-57 | -8.615850e-47 |
| Msa0279000 | Msa1220580 | 0.817882 | 2.618300e-52 | -8.615850e-47 |
| Msa0279000 | Msa1223990 | 0.806600 | 7.601964e-50 | -8.615850e-47 |
| Msa0279000 | Msa1226370 | 0.856913 | 2.332011e-62 | -8.615850e-47 |
| Msa0279000 | Msa1240940 | 0.822299 | 2.551668e-53 | -8.615850e-47 |
| Msa0279000 | Msa1255030 | -0.800149 | 1.649960e-48 | -8.615850e-47 |
| Msa0279000 | Msa1255710 | 0.813371 | 2.647773e-51 | -8.615850e-47 |
| Msa0279000 | Msa1263110 | 0.801137 | 1.037545e-48 | -8.615850e-47 |
| Msa0279000 | Msa1265570 | 0.808128 | 3.605598e-50 | -8.615850e-47 |
| Msa0279000 | Msa1282300 | 0.826548 | 2.553632e-54 | -8.615850e-47 |
| Msa0279000 | Msa1283980 | 0.806305 | 8.774024e-50 | -8.615850e-47 |
| Msa0279000 | Msa1286860 | -0.830153 | 3.447025e-55 | -8.615850e-47 |
| Msa0279000 | Msa1293840 | 0.801975 | 6.986080e-49 | -8.615850e-47 |
| Msa0279000 | Msa1294280 | 0.816607 | 5.069515e-52 | -8.615850e-47 |
| Msa0279000 | Msa1295210 | -0.808113 | 3.632744e-50 | -8.615850e-47 |
| Msa0279000 | Msa1297220 | -0.826358 | 2.835210e-54 | -8.615850e-47 |
| Msa0279000 | Msa1301820 | 0.800278 | 1.553585e-48 | -8.615850e-47 |
| Msa0279000 | Msa1301830 | 0.803510 | 3.368366e-49 | -8.615850e-47 |
| Msa0279000 | Msa1322980 | 0.827608 | 1.424003e-54 | -8.615850e-47 |
| Msa0279000 | Msa1323260 | -0.834776 | 2.464411e-56 | -8.615850e-47 |
| Msa0279000 | Msa1328280 | 0.814871 | 1.235269e-51 | -8.615850e-47 |
| Msa0279000 | Msa1328870 | 0.800966 | 1.124477e-48 | -8.615850e-47 |
| Msa0279000 | Msa1334560 | 0.824320 | 8.605934e-54 | -8.615850e-47 |
| Msa0279000 | Msa1334670 | 0.810098 | 1.364453e-50 | -8.615850e-47 |
| Msa0279000 | Msa1339200 | 0.861804 | 7.928822e-64 | -8.615850e-47 |
| Msa0279000 | Msa1342760 | 0.848358 | 6.448306e-60 | -8.615850e-47 |
| Msa0279000 | Msa1343450 | -0.828570 | 8.354452e-55 | -8.615850e-47 |
| Msa0279000 | Msa1347390 | 0.855651 | 5.467513e-62 | -8.615850e-47 |
| Msa0279000 | Msa1361980 | 0.816286 | 5.980843e-52 | -8.615850e-47 |
| Msa0279000 | Msa1361990 | 0.841433 | 4.766909e-58 | -8.615850e-47 |
| Msa0279000 | Msa1363010 | 0.809452 | 1.879506e-50 | -8.615850e-47 |
| Msa0279000 | Msa1365230 | 0.809218 | 2.109683e-50 | -8.615850e-47 |
| Msa0279000 | Msa1365820 | 0.813497 | 2.484835e-51 | -8.615850e-47 |
| Msa0279000 | Msa1368390 | 0.807378 | 5.203849e-50 | -8.615850e-47 |
| Msa0279000 | Msa1368420 | 0.803718 | 3.049552e-49 | -8.615850e-47 |
| Msa0279000 | Msa1371800 | 0.815474 | 9.076387e-52 | -8.615850e-47 |
| Msa0279000 | Msa1376310 | 0.820724 | 5.894971e-53 | -8.615850e-47 |
| Msa0279000 | Msa1382830 | 0.820094 | 8.224009e-53 | -8.615850e-47 |
| Msa0279000 | Msa1383220 | 0.802899 | 4.507001e-49 | -8.615850e-47 |
| Msa0279000 | Msa1387530 | 0.803146 | 4.005922e-49 | -8.615850e-47 |
| Msa0279000 | Msa1396100 | 0.826422 | 2.736109e-54 | -8.615850e-47 |
| Msa0279000 | Msa1402010 | 0.823180 | 1.591499e-53 | -8.615850e-47 |
| Msa0279000 | Msa1405830 | 0.817283 | 3.573281e-52 | -8.615850e-47 |
| Msa0279000 | Msa1406090 | 0.820175 | 7.882456e-53 | -8.615850e-47 |
| Msa0279000 | Msa1407810 | 0.821100 | 4.830628e-53 | -8.615850e-47 |
| Msa0279000 | Msa1413020 | 0.832578 | 8.727473e-56 | -8.615850e-47 |
| Msa0279000 | Msa1420830 | 0.801862 | 7.368723e-49 | -8.615850e-47 |
| Msa0279000 | Msa1437780 | 0.820498 | 6.644203e-53 | -8.615850e-47 |
| Msa0279000 | Msa1439920 | 0.805858 | 1.089769e-49 | -8.615850e-47 |
| Msa0279000 | Msa1450630 | -0.811925 | 5.486623e-51 | -8.615850e-47 |
| Msa0279000 | Msa1455360 | 0.802722 | 4.902431e-49 | -8.615850e-47 |
| Msa0279000 | Msa1455910 | 0.802032 | 6.799147e-49 | -8.615850e-47 |
| Msa0279000 | Msa1457770 | 0.822419 | 2.393003e-53 | -8.615850e-47 |
| Msa0279000 | Msa1458790 | 0.836589 | 8.563848e-57 | -8.615850e-47 |
| Msa0279000 | Msa1460520 | 0.810307 | 1.230212e-50 | -8.615850e-47 |
| Msa0279000 | Msa1461770 | 0.807827 | 4.178666e-50 | -8.615850e-47 |
| Msa0279000 | Msa1462780 | 0.845615 | 3.636498e-59 | -8.615850e-47 |
| Msa0279000 | Msa1463590 | 0.805676 | 1.189806e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0279000 | MtrunA17_Chr2g0292051 | 97.039 | 439 | 11 | 1 | 1 | 437 | 1 | 439 | 0.0 | 860 |
| Msa0279000 | MtrunA17_Chr1g0199801 | 45.788 | 463 | 196 | 12 | 9 | 417 | 1 | 462 | 3.77e-133 | 391 |
| Msa0279000 | MtrunA17_Chr1g0185551 | 36.697 | 436 | 191 | 10 | 22 | 431 | 1 | 377 | 1.35e-77 | 246 |
| Msa0279000 | MtrunA17_Chr7g0259871 | 38.875 | 391 | 190 | 11 | 22 | 394 | 1 | 360 | 7.04e-75 | 239 |
| Msa0279000 | MtrunA17_Chr5g0402451 | 30.548 | 347 | 187 | 15 | 67 | 365 | 10 | 350 | 9.22e-28 | 114 |
| Msa0279000 | MtrunA17_Chr5g0402441 | 30.857 | 350 | 179 | 17 | 67 | 365 | 16 | 353 | 6.13e-27 | 111 |
| Msa0279000 | MtrunA17_Chr1g0153781 | 26.603 | 421 | 238 | 16 | 52 | 420 | 6 | 407 | 5.52e-24 | 103 |
| Msa0279000 | MtrunA17_Chr3g0133691 | 28.065 | 367 | 210 | 16 | 84 | 401 | 36 | 397 | 3.18e-23 | 100 |
| Msa0279000 | MtrunA17_Chr8g0335591 | 27.913 | 369 | 226 | 17 | 67 | 400 | 32 | 395 | 6.90e-23 | 100 |
| Msa0279000 | MtrunA17_Chr8g0335581 | 25.455 | 385 | 245 | 13 | 67 | 415 | 21 | 399 | 1.89e-22 | 99.0 |
| Msa0279000 | MtrunA17_Chr3g0133681 | 27.100 | 369 | 211 | 17 | 84 | 401 | 36 | 397 | 7.51e-22 | 97.1 |
| Msa0279000 | MtrunA17_Chr8g0335611 | 28.649 | 370 | 224 | 15 | 67 | 400 | 32 | 397 | 2.37e-21 | 95.9 |
| Msa0279000 | MtrunA17_Chr8g0335621 | 28.378 | 370 | 225 | 15 | 67 | 400 | 63 | 428 | 8.94e-21 | 94.4 |
| Msa0279000 | MtrunA17_Chr8g0335631 | 27.507 | 349 | 212 | 13 | 87 | 400 | 51 | 393 | 2.76e-20 | 92.4 |
| Msa0279000 | MtrunA17_Chr8g0335651 | 28.070 | 342 | 208 | 14 | 87 | 400 | 52 | 383 | 1.16e-19 | 90.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0279000 | AT3G54950.1 | 48.630 | 438 | 196 | 7 | 2 | 412 | 32 | 467 | 2.09e-135 | 398 |
| Msa0279000 | AT2G39220.1 | 47.511 | 442 | 183 | 7 | 19 | 412 | 40 | 480 | 8.67e-131 | 387 |
| Msa0279000 | AT4G29800.1 | 42.333 | 463 | 201 | 8 | 15 | 412 | 43 | 504 | 4.25e-113 | 342 |
| Msa0279000 | AT4G29800.2 | 42.241 | 464 | 201 | 9 | 15 | 412 | 43 | 505 | 2.92e-111 | 337 |
| Msa0279000 | AT3G63200.1 | 42.494 | 393 | 171 | 10 | 22 | 394 | 3 | 360 | 7.92e-87 | 270 |
| Msa0279000 | AT4G37060.1 | 30.130 | 385 | 217 | 18 | 67 | 403 | 19 | 399 | 1.01e-28 | 117 |
| Msa0279000 | AT2G26560.1 | 29.815 | 379 | 218 | 15 | 67 | 400 | 19 | 394 | 8.19e-26 | 108 |
| Msa0279000 | AT4G37070.2 | 28.385 | 384 | 220 | 17 | 67 | 401 | 19 | 396 | 2.20e-24 | 104 |
| Msa0279000 | AT4G37060.2 | 27.952 | 415 | 218 | 19 | 67 | 403 | 19 | 430 | 1.19e-23 | 103 |
| Msa0279000 | AT4G37070.3 | 28.649 | 370 | 209 | 17 | 67 | 387 | 19 | 382 | 2.72e-23 | 101 |
| Msa0279000 | AT4G37070.1 | 28.649 | 370 | 209 | 17 | 67 | 387 | 19 | 382 | 2.72e-23 | 101 |
| Msa0279000 | AT4G37050.1 | 28.032 | 371 | 209 | 16 | 87 | 402 | 54 | 421 | 3.51e-23 | 101 |
| Msa0279000 | AT5G43590.1 | 27.778 | 288 | 168 | 10 | 87 | 336 | 33 | 318 | 1.04e-20 | 94.0 |
| Msa0279000 | AT5G43590.2 | 27.778 | 288 | 168 | 10 | 87 | 336 | 100 | 385 | 2.17e-20 | 93.6 |
| Msa0279000 | AT4G37070.4 | 27.297 | 370 | 203 | 17 | 67 | 387 | 19 | 371 | 3.23e-19 | 89.4 |
Find 124 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATACGAAATCTTCTCCATTT+TGG | 0.144885 | 2_3:-12217539 | Msa0279000:CDS |
| AACTTAATGTCTTGTGGTTT+TGG | 0.200873 | 2_3:-12215869 | Msa0279000:three_prime_UTR |
| GTGTATTGAAACATTGATTA+TGG | 0.206328 | 2_3:-12215586 | Msa0279000:three_prime_UTR |
| GTTGAGTCAGTCTTATTTAA+AGG | 0.208877 | 2_3:-12216190 | Msa0279000:CDS |
| ATCGGATTTGGTGGCGGTTT+CGG | 0.267788 | 2_3:-12216236 | Msa0279000:CDS |
| TTGGAAAACAAATTCTTATT+CGG | 0.286942 | 2_3:-12217520 | Msa0279000:CDS |
| TGTATGTTGGTTGTTGAAAA+TGG | 0.288958 | 2_3:+12217717 | None:intergenic |
| GATTTCTTCGACGCCGTTGC+TGG | 0.312723 | 2_3:-12217304 | Msa0279000:CDS |
| GGTAGGTTGTAGTAATATTA+AGG | 0.324081 | 2_3:+12215789 | None:intergenic |
| TTAGACAAATTGAAATTGTT+TGG | 0.328034 | 2_3:-12216142 | Msa0279000:CDS |
| GTGATAGTGATTTGTTCATA+TGG | 0.342580 | 2_3:-12215701 | Msa0279000:three_prime_UTR |
| GTTTGGTGGAGAGTTGATTA+AGG | 0.342805 | 2_3:-12216125 | Msa0279000:CDS |
| GCAGAGAATTCTGACTTTCC+CGG | 0.367032 | 2_3:+12217432 | None:intergenic |
| GTCCTAGGAGATGAAGTTCT+AGG | 0.368900 | 2_3:+12216040 | None:intergenic |
| TCAGGTTTCGTGAGAATTGC+CGG | 0.370289 | 2_3:-12216725 | Msa0279000:CDS |
| AAGAAAAGAGGAAGATTAGT+AGG | 0.373541 | 2_3:-12215955 | Msa0279000:three_prime_UTR |
| AACAGAATTTCCCGACGATC+GGG | 0.375905 | 2_3:-12217175 | Msa0279000:CDS |
| AAATGAAATAATTATAATCT+AGG | 0.383256 | 2_3:+12215768 | None:intergenic |
| GGGGAAAACCACATCGGATT+TGG | 0.391408 | 2_3:-12216248 | Msa0279000:CDS |
| GAGGATGCCGTCGGTGTAAC+CGG | 0.403495 | 2_3:+12217399 | None:intergenic |
| AATATGAGAGTTACTGTTAC+CGG | 0.409853 | 2_3:+12217330 | None:intergenic |
| CCAACTGTTGTGTTGAAGAA+TGG | 0.412565 | 2_3:-12216073 | Msa0279000:CDS |
| TTCGACGCCGTTGCTGGCTC+CGG | 0.416327 | 2_3:-12217298 | Msa0279000:CDS |
| TAACGGTGTTTCTGATTTGT+TGG | 0.422061 | 2_3:-12216798 | Msa0279000:CDS |
| AAGTTCAAGTTGTTGTTCAT+TGG | 0.424195 | 2_3:+12217601 | None:intergenic |
| TCTTTCTGAGGCAGGATTCA+AGG | 0.424873 | 2_3:+12217356 | None:intergenic |
| GATTTGTTGGTGCTTTCTCT+TGG | 0.427963 | 2_3:-12216785 | Msa0279000:CDS |
| CAAGCTGTATCAATGGCATT+TGG | 0.428031 | 2_3:-12216343 | Msa0279000:CDS |
| TTTCTCACCGGAAACAAAAT+CGG | 0.433911 | 2_3:-12217137 | Msa0279000:CDS |
| ACCGGATTTCTTTCTGAGGC+AGG | 0.435141 | 2_3:+12217348 | None:intergenic |
| TATGTGCGGATTCAATCAAA+TGG | 0.437366 | 2_3:-12216301 | Msa0279000:CDS |
| CGGTGAAGGAGCTTCCGATA+TGG | 0.438606 | 2_3:-12216705 | Msa0279000:intron |
| CCCGACGATCGGGGATTCTC+CGG | 0.439862 | 2_3:-12217165 | Msa0279000:CDS |
| TTCATATGGGTATTGTCAAA+AGG | 0.445205 | 2_3:-12215687 | Msa0279000:three_prime_UTR |
| ACGAAGATCTTAGCCGTTGA+TGG | 0.448292 | 2_3:-12216896 | Msa0279000:CDS |
| GAAACCTGAGGGAGACTTAA+CGG | 0.454179 | 2_3:+12216739 | None:intergenic |
| TGATAGTGATTTGTTCATAT+GGG | 0.456559 | 2_3:-12215700 | Msa0279000:three_prime_UTR |
| CCGGAGAATCCCCGATCGTC+GGG | 0.457645 | 2_3:+12217165 | None:intergenic |
| GAAAGAGAGAATTTGTATGT+TGG | 0.458611 | 2_3:+12217704 | None:intergenic |
| TCGTAGCAGGGAATTAAAAT+CGG | 0.459582 | 2_3:+12217061 | None:intergenic |
| GCCGTTGCTGGCTCCGGTGT+CGG | 0.460782 | 2_3:-12217292 | Msa0279000:CDS |
| GTCAGAATTCTCTGCATTGA+CGG | 0.462797 | 2_3:-12217424 | Msa0279000:CDS |
| GCGCGTGACGAGATCGTAGC+AGG | 0.470309 | 2_3:+12217048 | None:intergenic |
| TCCTAGGAGATGAAGTTCTA+GGG | 0.478439 | 2_3:+12216041 | None:intergenic |
| AAGGTAAACAAAGGGAAGAC+GGG | 0.479023 | 2_3:-12216268 | Msa0279000:CDS |
| GGCGGTTTCGGAGGAGATGT+TGG | 0.485077 | 2_3:-12216224 | Msa0279000:CDS |
| GACAAATTGAAATTGTTTGG+TGG | 0.485720 | 2_3:-12216139 | Msa0279000:CDS |
| TCGATGGACTTCAATTCAAT+AGG | 0.487410 | 2_3:+12216926 | None:intergenic |
| ATGTGCGGATTCAATCAAAT+GGG | 0.488399 | 2_3:-12216300 | Msa0279000:CDS |
| TTCAATTCAATAGGAGCCGC+TGG | 0.490050 | 2_3:+12216935 | None:intergenic |
| GAAATAATTATAATCTAGGT+AGG | 0.490393 | 2_3:+12215772 | None:intergenic |
| TTCTCTTGGTAACGGAGAGT+TGG | 0.496512 | 2_3:-12216771 | Msa0279000:CDS |
| GGTTGTAGTAATATTAAGGA+TGG | 0.505680 | 2_3:+12215793 | None:intergenic |
| TTTACCACGGGTGAAAAGTA+AGG | 0.511204 | 2_3:+12217255 | None:intergenic |
| TTGGTGCTTTCTCTTGGTAA+CGG | 0.511918 | 2_3:-12216779 | Msa0279000:CDS |
| AACCACATCGGATTTGGTGG+CGG | 0.512460 | 2_3:-12216242 | Msa0279000:CDS |
| TAACAGAATTTCCCGACGAT+CGG | 0.515375 | 2_3:-12217176 | Msa0279000:CDS |
| GAAAACCACATCGGATTTGG+TGG | 0.517533 | 2_3:-12216245 | Msa0279000:CDS |
| GTAGTAGCTGATGAAGTCCT+AGG | 0.521279 | 2_3:+12216025 | None:intergenic |
| GGTTGATCAAGCTGTATCAA+TGG | 0.525148 | 2_3:-12216350 | Msa0279000:CDS |
| CCCCTAGAACTTCATCTCCT+AGG | 0.526050 | 2_3:-12216042 | Msa0279000:CDS |
| AGTTGATTAAGGAAGAAGAG+AGG | 0.528571 | 2_3:-12216114 | Msa0279000:CDS |
| TTCGTGAGAATTGCCGGTGA+AGG | 0.529684 | 2_3:-12216719 | Msa0279000:CDS |
| ATCAAATGGGGTGATGGCTA+AGG | 0.530306 | 2_3:-12216287 | Msa0279000:CDS |
| AACGCCGTTAAGTCTCCCTC+AGG | 0.530840 | 2_3:-12216743 | Msa0279000:CDS |
| AGTCAGTCTTATTTAAAGGA+AGG | 0.532895 | 2_3:-12216186 | Msa0279000:CDS |
| TCCTGCCTCAGAAAGAAATC+CGG | 0.534121 | 2_3:-12217349 | Msa0279000:CDS |
| CCATTCTTCAACACAACAGT+TGG | 0.536757 | 2_3:+12216073 | None:intergenic |
| CATATCGGAAGCTCCTTCAC+CGG | 0.540361 | 2_3:+12216706 | None:intergenic |
| GCCGGAGAATCCCCGATCGT+CGG | 0.540416 | 2_3:+12217164 | None:intergenic |
| GGCGAGGACTCCACCGACAC+CGG | 0.540476 | 2_3:+12217279 | None:intergenic |
| ATTCTCTGCATTGACGGCGC+CGG | 0.540611 | 2_3:-12217418 | Msa0279000:CDS |
| GATCTTCGTCTTCCCATCGA+TGG | 0.541076 | 2_3:+12216910 | None:intergenic |
| TAAGGTAAACAAAGGGAAGA+CGG | 0.544495 | 2_3:-12216269 | Msa0279000:CDS |
| GAGTTTATCAACTTCGAAGT+TGG | 0.546260 | 2_3:+12217564 | None:intergenic |
| TCAGAAACACCGTTACAAAA+CGG | 0.547389 | 2_3:+12216806 | None:intergenic |
| GGATTCAACACTGCACAGCT+CGG | 0.562583 | 2_3:+12215814 | None:intergenic |
| GGAGATGAAGTTCTAGGGGA+GGG | 0.565558 | 2_3:+12216046 | None:intergenic |
| GATTTCGAGAGCGTCGGCGC+GGG | 0.567460 | 2_3:+12217009 | None:intergenic |
| TGAGTAACAGCAGTAGCCGT+TGG | 0.567616 | 2_3:+12216854 | None:intergenic |
| GATTCAATCAAATGGGGTGA+TGG | 0.569656 | 2_3:-12216293 | Msa0279000:CDS |
| GTTGCTGGCTCCGGTGTCGG+TGG | 0.572413 | 2_3:-12217289 | Msa0279000:CDS |
| ACCGACACCGGAGCCAGCAA+CGG | 0.573642 | 2_3:+12217291 | None:intergenic |
| CAGAAACTTCAAAGCTTCAT+CGG | 0.575680 | 2_3:+12217210 | None:intergenic |
| ATTGAATTGAAGTCCATCGA+TGG | 0.577788 | 2_3:-12216923 | Msa0279000:CDS |
| AGCCGCTGGATCAGCTGACG+TGG | 0.581310 | 2_3:+12216949 | None:intergenic |
| GACGGCGCCGGTTACACCGA+CGG | 0.582223 | 2_3:-12217406 | Msa0279000:CDS |
| GGATTTGGTGGCGGTTTCGG+AGG | 0.583638 | 2_3:-12216233 | Msa0279000:CDS |
| AAGGTGAGAGAGTGATTTCG+CGG | 0.586435 | 2_3:+12217375 | None:intergenic |
| CATCGCAACACCTCCATCAA+CGG | 0.587463 | 2_3:+12216883 | None:intergenic |
| AGGAGATGAAGTTCTAGGGG+AGG | 0.591108 | 2_3:+12216045 | None:intergenic |
| TTGAATTGAAGTCCATCGAT+GGG | 0.595371 | 2_3:-12216922 | Msa0279000:CDS |
| AGGTAATCCGTCTTTACCAC+GGG | 0.595561 | 2_3:+12217243 | None:intergenic |
| ACAGAATTTCCCGACGATCG+GGG | 0.599858 | 2_3:-12217174 | Msa0279000:CDS |
| ATCGTCGGGAAATTCTGTTA+CGG | 0.601025 | 2_3:+12217179 | None:intergenic |
| CTTTCTTAATCGATCTCAAG+CGG | 0.617258 | 2_3:+12215838 | None:intergenic |
| CCTAGGAGATGAAGTTCTAG+GGG | 0.628375 | 2_3:+12216042 | None:intergenic |
| TGCCACGTCAGCTGATCCAG+CGG | 0.628488 | 2_3:-12216951 | Msa0279000:CDS |
| CGCGTGACGAGATCGTAGCA+GGG | 0.629024 | 2_3:+12217049 | None:intergenic |
| AAGATCTTAGCCGTTGATGG+AGG | 0.638110 | 2_3:-12216893 | Msa0279000:CDS |
| TTTCGCGGCGAGGATGCCGT+CGG | 0.641184 | 2_3:+12217390 | None:intergenic |
| GCAATTCTCACGAAACCTGA+GGG | 0.641382 | 2_3:+12216728 | None:intergenic |
| GTAGATTGAACAATTATGTG+CGG | 0.642262 | 2_3:-12216315 | Msa0279000:CDS |
| GGCAATTCTCACGAAACCTG+AGG | 0.645971 | 2_3:+12216727 | None:intergenic |
| GAGGTAATCCGTCTTTACCA+CGG | 0.646558 | 2_3:+12217242 | None:intergenic |
| ACCGTCGATTTCGAGAGCGT+CGG | 0.652715 | 2_3:+12217003 | None:intergenic |
| TGTTACCGGATTTCTTTCTG+AGG | 0.653122 | 2_3:+12217344 | None:intergenic |
| GTGATGGCTAAGGTAAACAA+AGG | 0.654646 | 2_3:-12216277 | Msa0279000:CDS |
| CGATTTCGAGAGCGTCGGCG+CGG | 0.655501 | 2_3:+12217008 | None:intergenic |
| TGATGGCTAAGGTAAACAAA+GGG | 0.662128 | 2_3:-12216276 | Msa0279000:CDS |
| ATTTAAAGGAAGGAAGATCG+TGG | 0.667169 | 2_3:-12216176 | Msa0279000:CDS |
| TCGGCGCGGGAGAAAACGAA+CGG | 0.671166 | 2_3:+12217022 | None:intergenic |
| GCCGACGCTCTCGAAATCGA+CGG | 0.676469 | 2_3:-12217004 | Msa0279000:CDS |
| GGGTGAAAAGTAAGGCGGCG+AGG | 0.686118 | 2_3:+12217263 | None:intergenic |
| GCTTCATCGGCAGTGAACAG+AGG | 0.690278 | 2_3:+12217223 | None:intergenic |
| TTTCCGGTGAGAAAACTCGC+CGG | 0.691056 | 2_3:+12217146 | None:intergenic |
| AACCGCCACCAAATCCGATG+TGG | 0.694040 | 2_3:+12216240 | None:intergenic |
| TGTTGCGATGAACAATCCAA+CGG | 0.695987 | 2_3:-12216870 | Msa0279000:CDS |
| ACCACGGGTGAAAAGTAAGG+CGG | 0.698481 | 2_3:+12217258 | None:intergenic |
| AGGTAAACAAAGGGAAGACG+GGG | 0.704588 | 2_3:-12216267 | Msa0279000:CDS |
| TGTGCGGATTCAATCAAATG+GGG | 0.705308 | 2_3:-12216299 | Msa0279000:CDS |
| GAGAGAGTGATTTCGCGGCG+AGG | 0.707647 | 2_3:+12217380 | None:intergenic |
| GAGAATTCTGACTTTCCCGG+CGG | 0.726321 | 2_3:+12217435 | None:intergenic |
| GAAGACGGGGAAAACCACAT+CGG | 0.743605 | 2_3:-12216254 | Msa0279000:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATGAAATAATTATAATCT+AGG | + | chr2_3:12217528-12217547 | None:intergenic | 10.0% |
| !! | AAATGAAATAATTATAATCT+AGG | + | chr2_3:12217528-12217547 | None:intergenic | 10.0% |
| !!! | AATTTTTTTTCTTACCATAT+CGG | + | chr2_3:12216605-12216624 | None:intergenic | 15.0% |
| !! | AAAATAATTCGAAATTGAAT+CGG | - | chr2_3:12216736-12216755 | Msa0279000:CDS | 15.0% |
| !! | ATGAATGAATATTATAATGT+AGG | - | chr2_3:12216922-12216941 | Msa0279000:CDS | 15.0% |
| !!! | TAAAAATTAGATTTTGTTGT+GGG | - | chr2_3:12217370-12217389 | Msa0279000:CDS | 15.0% |
| !!! | TTTTTATCTTTGTTTAGTTT+TGG | - | chr2_3:12217549-12217568 | Msa0279000:CDS | 15.0% |
| !!! | AATTTTTTTTCTTACCATAT+CGG | + | chr2_3:12216605-12216624 | None:intergenic | 15.0% |
| !! | AAAATAATTCGAAATTGAAT+CGG | - | chr2_3:12216736-12216755 | Msa0279000:CDS | 15.0% |
| !! | ATGAATGAATATTATAATGT+AGG | - | chr2_3:12216922-12216941 | Msa0279000:CDS | 15.0% |
| !!! | TAAAAATTAGATTTTGTTGT+GGG | - | chr2_3:12217370-12217389 | Msa0279000:CDS | 15.0% |
| !!! | TTTTTATCTTTGTTTAGTTT+TGG | - | chr2_3:12217549-12217568 | Msa0279000:CDS | 15.0% |
| !!! | TAAGAATTTGTTTTCCAAAA+TGG | + | chr2_3:12215771-12215790 | None:intergenic | 20.0% |
| !! | TTGGAAAACAAATTCTTATT+CGG | - | chr2_3:12215773-12215792 | Msa0279000:three_prime_UTR | 20.0% |
| !! | TTAGACAAATTGAAATTGTT+TGG | - | chr2_3:12217151-12217170 | Msa0279000:CDS | 20.0% |
| !!! | CTAAAAATTAGATTTTGTTG+TGG | - | chr2_3:12217369-12217388 | Msa0279000:CDS | 20.0% |
| !! | GAAATAATTATAATCTAGGT+AGG | + | chr2_3:12217524-12217543 | None:intergenic | 20.0% |
| !!! | TAAGAATTTGTTTTCCAAAA+TGG | + | chr2_3:12215771-12215790 | None:intergenic | 20.0% |
| !! | TTGGAAAACAAATTCTTATT+CGG | - | chr2_3:12215773-12215792 | Msa0279000:three_prime_UTR | 20.0% |
| !! | TTAGACAAATTGAAATTGTT+TGG | - | chr2_3:12217151-12217170 | Msa0279000:CDS | 20.0% |
| !!! | CTAAAAATTAGATTTTGTTG+TGG | - | chr2_3:12217369-12217388 | Msa0279000:CDS | 20.0% |
| !! | GAAATAATTATAATCTAGGT+AGG | + | chr2_3:12217524-12217543 | None:intergenic | 20.0% |
| ! | AACTCAAATTGCAGAAAAAA+TGG | - | chr2_3:12215652-12215671 | Msa0279000:three_prime_UTR | 25.0% |
| !!! | AGAATGTGTTTGTTTTTGTT+AGG | + | chr2_3:12216798-12216817 | None:intergenic | 25.0% |
| ! | ATTTGTAGTGAATAATGAGT+AGG | - | chr2_3:12216846-12216865 | Msa0279000:CDS | 25.0% |
| ! | TAATGAGTAGGTCTAATTAT+TGG | - | chr2_3:12216858-12216877 | Msa0279000:CDS | 25.0% |
| ! | AAGAAGACAAAAAAGAAAAG+AGG | - | chr2_3:12217326-12217345 | Msa0279000:CDS | 25.0% |
| !!! | TTTTGAAACTTAATGTCTTG+TGG | - | chr2_3:12217418-12217437 | Msa0279000:CDS | 25.0% |
| !!! | TGATAGTGATTTGTTCATAT+GGG | - | chr2_3:12217593-12217612 | Msa0279000:CDS | 25.0% |
| !! | GTGTATTGAAACATTGATTA+TGG | - | chr2_3:12217707-12217726 | Msa0279000:five_prime_UTR | 25.0% |
| ! | AACTCAAATTGCAGAAAAAA+TGG | - | chr2_3:12215652-12215671 | Msa0279000:three_prime_UTR | 25.0% |
| !!! | AGAATGTGTTTGTTTTTGTT+AGG | + | chr2_3:12216798-12216817 | None:intergenic | 25.0% |
| ! | ATTTGTAGTGAATAATGAGT+AGG | - | chr2_3:12216846-12216865 | Msa0279000:CDS | 25.0% |
| ! | TAATGAGTAGGTCTAATTAT+TGG | - | chr2_3:12216858-12216877 | Msa0279000:CDS | 25.0% |
| ! | AAGAAGACAAAAAAGAAAAG+AGG | - | chr2_3:12217326-12217345 | Msa0279000:CDS | 25.0% |
| !!! | TTTTGAAACTTAATGTCTTG+TGG | - | chr2_3:12217418-12217437 | Msa0279000:CDS | 25.0% |
| !!! | TGATAGTGATTTGTTCATAT+GGG | - | chr2_3:12217593-12217612 | Msa0279000:CDS | 25.0% |
| !! | GTGTATTGAAACATTGATTA+TGG | - | chr2_3:12217707-12217726 | Msa0279000:five_prime_UTR | 25.0% |
| ! | TGTATGTTGGTTGTTGAAAA+TGG | + | chr2_3:12215579-12215598 | None:intergenic | 30.0% |
| GAAAGAGAGAATTTGTATGT+TGG | + | chr2_3:12215592-12215611 | None:intergenic | 30.0% | |
| !!! | TTTTTCTGCAATTTGAGTTG+AGG | + | chr2_3:12215651-12215670 | None:intergenic | 30.0% |
| TCAAATTGCAGAAAAAATGG+CGG | - | chr2_3:12215655-12215674 | Msa0279000:three_prime_UTR | 30.0% | |
| !! | AAGTTCAAGTTGTTGTTCAT+TGG | + | chr2_3:12215695-12215714 | None:intergenic | 30.0% |
| ! | ATACGAAATCTTCTCCATTT+TGG | - | chr2_3:12215754-12215773 | Msa0279000:three_prime_UTR | 30.0% |
| AATATGAGAGTTACTGTTAC+CGG | + | chr2_3:12215966-12215985 | None:intergenic | 30.0% | |
| ! | AAGCTTTTCCGAAAAACATT+CGG | - | chr2_3:12216181-12216200 | Msa0279000:CDS | 30.0% |
| ATAATTCGAAATTGAATCGG+TGG | - | chr2_3:12216739-12216758 | Msa0279000:CDS | 30.0% | |
| GTAGATTGAACAATTATGTG+CGG | - | chr2_3:12216978-12216997 | Msa0279000:CDS | 30.0% | |
| !! | GTTGAGTCAGTCTTATTTAA+AGG | - | chr2_3:12217103-12217122 | Msa0279000:CDS | 30.0% |
| !! | AGTCAGTCTTATTTAAAGGA+AGG | - | chr2_3:12217107-12217126 | Msa0279000:CDS | 30.0% |
| GACAAATTGAAATTGTTTGG+TGG | - | chr2_3:12217154-12217173 | Msa0279000:CDS | 30.0% | |
| AAGAAAAGAGGAAGATTAGT+AGG | - | chr2_3:12217338-12217357 | Msa0279000:CDS | 30.0% | |
| ! | AACTTAATGTCTTGTGGTTT+TGG | - | chr2_3:12217424-12217443 | Msa0279000:CDS | 30.0% |
| ! | ACTTAATGTCTTGTGGTTTT+GGG | - | chr2_3:12217425-12217444 | Msa0279000:CDS | 30.0% |
| GGTTGTAGTAATATTAAGGA+TGG | + | chr2_3:12217503-12217522 | None:intergenic | 30.0% | |
| GGTAGGTTGTAGTAATATTA+AGG | + | chr2_3:12217507-12217526 | None:intergenic | 30.0% | |
| !! | GTGATAGTGATTTGTTCATA+TGG | - | chr2_3:12217592-12217611 | Msa0279000:CDS | 30.0% |
| ! | TTCATATGGGTATTGTCAAA+AGG | - | chr2_3:12217606-12217625 | Msa0279000:CDS | 30.0% |
| ! | CAAAAGGTGAATTTTGTACA+AGG | - | chr2_3:12217622-12217641 | Msa0279000:CDS | 30.0% |
| ! | TGTATGTTGGTTGTTGAAAA+TGG | + | chr2_3:12215579-12215598 | None:intergenic | 30.0% |
| GAAAGAGAGAATTTGTATGT+TGG | + | chr2_3:12215592-12215611 | None:intergenic | 30.0% | |
| !!! | TTTTTCTGCAATTTGAGTTG+AGG | + | chr2_3:12215651-12215670 | None:intergenic | 30.0% |
| TCAAATTGCAGAAAAAATGG+CGG | - | chr2_3:12215655-12215674 | Msa0279000:three_prime_UTR | 30.0% | |
| !! | AAGTTCAAGTTGTTGTTCAT+TGG | + | chr2_3:12215695-12215714 | None:intergenic | 30.0% |
| ! | ATACGAAATCTTCTCCATTT+TGG | - | chr2_3:12215754-12215773 | Msa0279000:three_prime_UTR | 30.0% |
| AATATGAGAGTTACTGTTAC+CGG | + | chr2_3:12215966-12215985 | None:intergenic | 30.0% | |
| ! | AAGCTTTTCCGAAAAACATT+CGG | - | chr2_3:12216181-12216200 | Msa0279000:CDS | 30.0% |
| ATAATTCGAAATTGAATCGG+TGG | - | chr2_3:12216739-12216758 | Msa0279000:CDS | 30.0% | |
| GTAGATTGAACAATTATGTG+CGG | - | chr2_3:12216978-12216997 | Msa0279000:CDS | 30.0% | |
| !! | GTTGAGTCAGTCTTATTTAA+AGG | - | chr2_3:12217103-12217122 | Msa0279000:CDS | 30.0% |
| !! | AGTCAGTCTTATTTAAAGGA+AGG | - | chr2_3:12217107-12217126 | Msa0279000:CDS | 30.0% |
| GACAAATTGAAATTGTTTGG+TGG | - | chr2_3:12217154-12217173 | Msa0279000:CDS | 30.0% | |
| AAGAAAAGAGGAAGATTAGT+AGG | - | chr2_3:12217338-12217357 | Msa0279000:CDS | 30.0% | |
| ! | AACTTAATGTCTTGTGGTTT+TGG | - | chr2_3:12217424-12217443 | Msa0279000:CDS | 30.0% |
| ! | ACTTAATGTCTTGTGGTTTT+GGG | - | chr2_3:12217425-12217444 | Msa0279000:CDS | 30.0% |
| GGTTGTAGTAATATTAAGGA+TGG | + | chr2_3:12217503-12217522 | None:intergenic | 30.0% | |
| GGTAGGTTGTAGTAATATTA+AGG | + | chr2_3:12217507-12217526 | None:intergenic | 30.0% | |
| !! | GTGATAGTGATTTGTTCATA+TGG | - | chr2_3:12217592-12217611 | Msa0279000:CDS | 30.0% |
| ! | TTCATATGGGTATTGTCAAA+AGG | - | chr2_3:12217606-12217625 | Msa0279000:CDS | 30.0% |
| ! | CAAAAGGTGAATTTTGTACA+AGG | - | chr2_3:12217622-12217641 | Msa0279000:CDS | 30.0% |
| GAGTTTATCAACTTCGAAGT+TGG | + | chr2_3:12215732-12215751 | None:intergenic | 35.0% | |
| ! | AAGCGAATTCTTCGCATTTT+CGG | + | chr2_3:12215810-12215829 | None:intergenic | 35.0% |
| CAGAAACTTCAAAGCTTCAT+CGG | + | chr2_3:12216086-12216105 | None:intergenic | 35.0% | |
| TTTCTCACCGGAAACAAAAT+CGG | - | chr2_3:12216156-12216175 | Msa0279000:CDS | 35.0% | |
| ! | TGCATTCTCCGAATGTTTTT+CGG | + | chr2_3:12216192-12216211 | None:intergenic | 35.0% |
| TCGTAGCAGGGAATTAAAAT+CGG | + | chr2_3:12216235-12216254 | None:intergenic | 35.0% | |
| ! | TCGATGGACTTCAATTCAAT+AGG | + | chr2_3:12216370-12216389 | None:intergenic | 35.0% |
| ATTGAATTGAAGTCCATCGA+TGG | - | chr2_3:12216370-12216389 | Msa0279000:intron | 35.0% | |
| TTGAATTGAAGTCCATCGAT+GGG | - | chr2_3:12216371-12216390 | Msa0279000:intron | 35.0% | |
| ! | CATGAGTTTCCGTTTTGTAA+CGG | - | chr2_3:12216478-12216497 | Msa0279000:intron | 35.0% |
| TCAGAAACACCGTTACAAAA+CGG | + | chr2_3:12216490-12216509 | None:intergenic | 35.0% | |
| ! | TAACGGTGTTTCTGATTTGT+TGG | - | chr2_3:12216495-12216514 | Msa0279000:intron | 35.0% |
| TATGTGCGGATTCAATCAAA+TGG | - | chr2_3:12216992-12217011 | Msa0279000:CDS | 35.0% | |
| ATGTGCGGATTCAATCAAAT+GGG | - | chr2_3:12216993-12217012 | Msa0279000:CDS | 35.0% | |
| TGATGGCTAAGGTAAACAAA+GGG | - | chr2_3:12217017-12217036 | Msa0279000:CDS | 35.0% | |
| TAAGGTAAACAAAGGGAAGA+CGG | - | chr2_3:12217024-12217043 | Msa0279000:CDS | 35.0% | |
| ATTTAAAGGAAGGAAGATCG+TGG | - | chr2_3:12217117-12217136 | Msa0279000:CDS | 35.0% | |
| AGTTGATTAAGGAAGAAGAG+AGG | - | chr2_3:12217179-12217198 | Msa0279000:CDS | 35.0% | |
| CTTTCTTAATCGATCTCAAG+CGG | + | chr2_3:12217458-12217477 | None:intergenic | 35.0% | |
| GAGTTTATCAACTTCGAAGT+TGG | + | chr2_3:12215732-12215751 | None:intergenic | 35.0% | |
| ! | AAGCGAATTCTTCGCATTTT+CGG | + | chr2_3:12215810-12215829 | None:intergenic | 35.0% |
| CAGAAACTTCAAAGCTTCAT+CGG | + | chr2_3:12216086-12216105 | None:intergenic | 35.0% | |
| TTTCTCACCGGAAACAAAAT+CGG | - | chr2_3:12216156-12216175 | Msa0279000:CDS | 35.0% | |
| ! | TGCATTCTCCGAATGTTTTT+CGG | + | chr2_3:12216192-12216211 | None:intergenic | 35.0% |
| TCGTAGCAGGGAATTAAAAT+CGG | + | chr2_3:12216235-12216254 | None:intergenic | 35.0% | |
| ! | TCGATGGACTTCAATTCAAT+AGG | + | chr2_3:12216370-12216389 | None:intergenic | 35.0% |
| ATTGAATTGAAGTCCATCGA+TGG | - | chr2_3:12216370-12216389 | Msa0279000:intron | 35.0% | |
| TTGAATTGAAGTCCATCGAT+GGG | - | chr2_3:12216371-12216390 | Msa0279000:intron | 35.0% | |
| ! | CATGAGTTTCCGTTTTGTAA+CGG | - | chr2_3:12216478-12216497 | Msa0279000:intron | 35.0% |
| TCAGAAACACCGTTACAAAA+CGG | + | chr2_3:12216490-12216509 | None:intergenic | 35.0% | |
| ! | TAACGGTGTTTCTGATTTGT+TGG | - | chr2_3:12216495-12216514 | Msa0279000:intron | 35.0% |
| TATGTGCGGATTCAATCAAA+TGG | - | chr2_3:12216992-12217011 | Msa0279000:CDS | 35.0% | |
| ATGTGCGGATTCAATCAAAT+GGG | - | chr2_3:12216993-12217012 | Msa0279000:CDS | 35.0% | |
| TGATGGCTAAGGTAAACAAA+GGG | - | chr2_3:12217017-12217036 | Msa0279000:CDS | 35.0% | |
| TAAGGTAAACAAAGGGAAGA+CGG | - | chr2_3:12217024-12217043 | Msa0279000:CDS | 35.0% | |
| ATTTAAAGGAAGGAAGATCG+TGG | - | chr2_3:12217117-12217136 | Msa0279000:CDS | 35.0% | |
| AGTTGATTAAGGAAGAAGAG+AGG | - | chr2_3:12217179-12217198 | Msa0279000:CDS | 35.0% | |
| CTTTCTTAATCGATCTCAAG+CGG | + | chr2_3:12217458-12217477 | None:intergenic | 35.0% | |
| !! | ATTCTTCGCATTTTCGGTGT+CGG | + | chr2_3:12215804-12215823 | None:intergenic | 40.0% |
| GTCAGAATTCTCTGCATTGA+CGG | - | chr2_3:12215869-12215888 | Msa0279000:three_prime_UTR | 40.0% | |
| TGTTACCGGATTTCTTTCTG+AGG | + | chr2_3:12215952-12215971 | None:intergenic | 40.0% | |
| TTTACCACGGGTGAAAAGTA+AGG | + | chr2_3:12216041-12216060 | None:intergenic | 40.0% | |
| ATCGTCGGGAAATTCTGTTA+CGG | + | chr2_3:12216117-12216136 | None:intergenic | 40.0% | |
| TAACAGAATTTCCCGACGAT+CGG | - | chr2_3:12216117-12216136 | Msa0279000:CDS | 40.0% | |
| !! | AGCTTCTCCGATTTTGTTTC+CGG | + | chr2_3:12216166-12216185 | None:intergenic | 40.0% |
| TGTTGCGATGAACAATCCAA+CGG | - | chr2_3:12216423-12216442 | Msa0279000:intron | 40.0% | |
| !! | GATTTGTTGGTGCTTTCTCT+TGG | - | chr2_3:12216508-12216527 | Msa0279000:intron | 40.0% |
| ! | TTGGTGCTTTCTCTTGGTAA+CGG | - | chr2_3:12216514-12216533 | Msa0279000:intron | 40.0% |
| TGAATCGGTGGTTACTAGTT+AGG | - | chr2_3:12216751-12216770 | Msa0279000:CDS | 40.0% | |
| GGTTGATCAAGCTGTATCAA+TGG | - | chr2_3:12216943-12216962 | Msa0279000:CDS | 40.0% | |
| CAAGCTGTATCAATGGCATT+TGG | - | chr2_3:12216950-12216969 | Msa0279000:CDS | 40.0% | |
| TGTGCGGATTCAATCAAATG+GGG | - | chr2_3:12216994-12217013 | Msa0279000:CDS | 40.0% | |
| GATTCAATCAAATGGGGTGA+TGG | - | chr2_3:12217000-12217019 | Msa0279000:CDS | 40.0% | |
| GTGATGGCTAAGGTAAACAA+AGG | - | chr2_3:12217016-12217035 | Msa0279000:CDS | 40.0% | |
| AAGGTAAACAAAGGGAAGAC+GGG | - | chr2_3:12217025-12217044 | Msa0279000:CDS | 40.0% | |
| ! | GTTTGGTGGAGAGTTGATTA+AGG | - | chr2_3:12217168-12217187 | Msa0279000:CDS | 40.0% |
| CCATTCTTCAACACAACAGT+TGG | + | chr2_3:12217223-12217242 | None:intergenic | 40.0% | |
| CCAACTGTTGTGTTGAAGAA+TGG | - | chr2_3:12217220-12217239 | Msa0279000:CDS | 40.0% | |
| TCCTAGGAGATGAAGTTCTA+GGG | + | chr2_3:12217255-12217274 | None:intergenic | 40.0% | |
| !! | ATTCTTCGCATTTTCGGTGT+CGG | + | chr2_3:12215804-12215823 | None:intergenic | 40.0% |
| GTCAGAATTCTCTGCATTGA+CGG | - | chr2_3:12215869-12215888 | Msa0279000:three_prime_UTR | 40.0% | |
| TGTTACCGGATTTCTTTCTG+AGG | + | chr2_3:12215952-12215971 | None:intergenic | 40.0% | |
| TTTACCACGGGTGAAAAGTA+AGG | + | chr2_3:12216041-12216060 | None:intergenic | 40.0% | |
| ATCGTCGGGAAATTCTGTTA+CGG | + | chr2_3:12216117-12216136 | None:intergenic | 40.0% | |
| TAACAGAATTTCCCGACGAT+CGG | - | chr2_3:12216117-12216136 | Msa0279000:CDS | 40.0% | |
| !! | AGCTTCTCCGATTTTGTTTC+CGG | + | chr2_3:12216166-12216185 | None:intergenic | 40.0% |
| TGTTGCGATGAACAATCCAA+CGG | - | chr2_3:12216423-12216442 | Msa0279000:intron | 40.0% | |
| !! | GATTTGTTGGTGCTTTCTCT+TGG | - | chr2_3:12216508-12216527 | Msa0279000:intron | 40.0% |
| ! | TTGGTGCTTTCTCTTGGTAA+CGG | - | chr2_3:12216514-12216533 | Msa0279000:intron | 40.0% |
| TGAATCGGTGGTTACTAGTT+AGG | - | chr2_3:12216751-12216770 | Msa0279000:CDS | 40.0% | |
| GGTTGATCAAGCTGTATCAA+TGG | - | chr2_3:12216943-12216962 | Msa0279000:CDS | 40.0% | |
| CAAGCTGTATCAATGGCATT+TGG | - | chr2_3:12216950-12216969 | Msa0279000:CDS | 40.0% | |
| TGTGCGGATTCAATCAAATG+GGG | - | chr2_3:12216994-12217013 | Msa0279000:CDS | 40.0% | |
| GATTCAATCAAATGGGGTGA+TGG | - | chr2_3:12217000-12217019 | Msa0279000:CDS | 40.0% | |
| GTGATGGCTAAGGTAAACAA+AGG | - | chr2_3:12217016-12217035 | Msa0279000:CDS | 40.0% | |
| AAGGTAAACAAAGGGAAGAC+GGG | - | chr2_3:12217025-12217044 | Msa0279000:CDS | 40.0% | |
| ! | GTTTGGTGGAGAGTTGATTA+AGG | - | chr2_3:12217168-12217187 | Msa0279000:CDS | 40.0% |
| CCATTCTTCAACACAACAGT+TGG | + | chr2_3:12217223-12217242 | None:intergenic | 40.0% | |
| CCAACTGTTGTGTTGAAGAA+TGG | - | chr2_3:12217220-12217239 | Msa0279000:CDS | 40.0% | |
| TCCTAGGAGATGAAGTTCTA+GGG | + | chr2_3:12217255-12217274 | None:intergenic | 40.0% | |
| GCAGAGAATTCTGACTTTCC+CGG | + | chr2_3:12215864-12215883 | None:intergenic | 45.0% | |
| AAGGTGAGAGAGTGATTTCG+CGG | + | chr2_3:12215921-12215940 | None:intergenic | 45.0% | |
| !! | TCTTTCTGAGGCAGGATTCA+AGG | + | chr2_3:12215940-12215959 | None:intergenic | 45.0% |
| TCCTGCCTCAGAAAGAAATC+CGG | - | chr2_3:12215944-12215963 | Msa0279000:three_prime_UTR | 45.0% | |
| ! | CTTTTCACCCGTGGTAAAGA+CGG | - | chr2_3:12216043-12216062 | Msa0279000:CDS | 45.0% |
| AGGTAATCCGTCTTTACCAC+GGG | + | chr2_3:12216053-12216072 | None:intergenic | 45.0% | |
| GAGGTAATCCGTCTTTACCA+CGG | + | chr2_3:12216054-12216073 | None:intergenic | 45.0% | |
| AACAGAATTTCCCGACGATC+GGG | - | chr2_3:12216118-12216137 | Msa0279000:CDS | 45.0% | |
| TTCAATTCAATAGGAGCCGC+TGG | + | chr2_3:12216361-12216380 | None:intergenic | 45.0% | |
| ACGAAGATCTTAGCCGTTGA+TGG | - | chr2_3:12216397-12216416 | Msa0279000:intron | 45.0% | |
| ! | AAGATCTTAGCCGTTGATGG+AGG | - | chr2_3:12216400-12216419 | Msa0279000:intron | 45.0% |
| !! | TTCTCTTGGTAACGGAGAGT+TGG | - | chr2_3:12216522-12216541 | Msa0279000:intron | 45.0% |
| GAAACCTGAGGGAGACTTAA+CGG | + | chr2_3:12216557-12216576 | None:intergenic | 45.0% | |
| GCAATTCTCACGAAACCTGA+GGG | + | chr2_3:12216568-12216587 | None:intergenic | 45.0% | |
| TCAGGTTTCGTGAGAATTGC+CGG | - | chr2_3:12216568-12216587 | Msa0279000:intron | 45.0% | |
| ! | ATCAAATGGGGTGATGGCTA+AGG | - | chr2_3:12217006-12217025 | Msa0279000:CDS | 45.0% |
| AGGTAAACAAAGGGAAGACG+GGG | - | chr2_3:12217026-12217045 | Msa0279000:CDS | 45.0% | |
| GAAAACCACATCGGATTTGG+TGG | - | chr2_3:12217048-12217067 | Msa0279000:CDS | 45.0% | |
| ! | CCTAGGAGATGAAGTTCTAG+GGG | + | chr2_3:12217254-12217273 | None:intergenic | 45.0% |
| GTCCTAGGAGATGAAGTTCT+AGG | + | chr2_3:12217256-12217275 | None:intergenic | 45.0% | |
| GTAGTAGCTGATGAAGTCCT+AGG | + | chr2_3:12217271-12217290 | None:intergenic | 45.0% | |
| GCAGAGAATTCTGACTTTCC+CGG | + | chr2_3:12215864-12215883 | None:intergenic | 45.0% | |
| AAGGTGAGAGAGTGATTTCG+CGG | + | chr2_3:12215921-12215940 | None:intergenic | 45.0% | |
| !! | TCTTTCTGAGGCAGGATTCA+AGG | + | chr2_3:12215940-12215959 | None:intergenic | 45.0% |
| TCCTGCCTCAGAAAGAAATC+CGG | - | chr2_3:12215944-12215963 | Msa0279000:three_prime_UTR | 45.0% | |
| ! | CTTTTCACCCGTGGTAAAGA+CGG | - | chr2_3:12216043-12216062 | Msa0279000:CDS | 45.0% |
| AGGTAATCCGTCTTTACCAC+GGG | + | chr2_3:12216053-12216072 | None:intergenic | 45.0% | |
| GAGGTAATCCGTCTTTACCA+CGG | + | chr2_3:12216054-12216073 | None:intergenic | 45.0% | |
| AACAGAATTTCCCGACGATC+GGG | - | chr2_3:12216118-12216137 | Msa0279000:CDS | 45.0% | |
| TTCAATTCAATAGGAGCCGC+TGG | + | chr2_3:12216361-12216380 | None:intergenic | 45.0% | |
| ACGAAGATCTTAGCCGTTGA+TGG | - | chr2_3:12216397-12216416 | Msa0279000:intron | 45.0% | |
| ! | AAGATCTTAGCCGTTGATGG+AGG | - | chr2_3:12216400-12216419 | Msa0279000:intron | 45.0% |
| !! | TTCTCTTGGTAACGGAGAGT+TGG | - | chr2_3:12216522-12216541 | Msa0279000:intron | 45.0% |
| GAAACCTGAGGGAGACTTAA+CGG | + | chr2_3:12216557-12216576 | None:intergenic | 45.0% | |
| GCAATTCTCACGAAACCTGA+GGG | + | chr2_3:12216568-12216587 | None:intergenic | 45.0% | |
| TCAGGTTTCGTGAGAATTGC+CGG | - | chr2_3:12216568-12216587 | Msa0279000:intron | 45.0% | |
| ! | ATCAAATGGGGTGATGGCTA+AGG | - | chr2_3:12217006-12217025 | Msa0279000:CDS | 45.0% |
| AGGTAAACAAAGGGAAGACG+GGG | - | chr2_3:12217026-12217045 | Msa0279000:CDS | 45.0% | |
| GAAAACCACATCGGATTTGG+TGG | - | chr2_3:12217048-12217067 | Msa0279000:CDS | 45.0% | |
| ! | CCTAGGAGATGAAGTTCTAG+GGG | + | chr2_3:12217254-12217273 | None:intergenic | 45.0% |
| GTCCTAGGAGATGAAGTTCT+AGG | + | chr2_3:12217256-12217275 | None:intergenic | 45.0% | |
| GTAGTAGCTGATGAAGTCCT+AGG | + | chr2_3:12217271-12217290 | None:intergenic | 45.0% | |
| AAACAAGCCAAAAACGCCGC+CGG | - | chr2_3:12215842-12215861 | Msa0279000:three_prime_UTR | 50.0% | |
| GAGAATTCTGACTTTCCCGG+CGG | + | chr2_3:12215861-12215880 | None:intergenic | 50.0% | |
| !! | ACCGGATTTCTTTCTGAGGC+AGG | + | chr2_3:12215948-12215967 | None:intergenic | 50.0% |
| ACCACGGGTGAAAAGTAAGG+CGG | + | chr2_3:12216038-12216057 | None:intergenic | 50.0% | |
| ACAGAATTTCCCGACGATCG+GGG | - | chr2_3:12216119-12216138 | Msa0279000:CDS | 50.0% | |
| TTTCCGGTGAGAAAACTCGC+CGG | + | chr2_3:12216150-12216169 | None:intergenic | 50.0% | |
| GATCTTCGTCTTCCCATCGA+TGG | + | chr2_3:12216386-12216405 | None:intergenic | 50.0% | |
| CATCGCAACACCTCCATCAA+CGG | + | chr2_3:12216413-12216432 | None:intergenic | 50.0% | |
| TGAGTAACAGCAGTAGCCGT+TGG | + | chr2_3:12216442-12216461 | None:intergenic | 50.0% | |
| GGCAATTCTCACGAAACCTG+AGG | + | chr2_3:12216569-12216588 | None:intergenic | 50.0% | |
| TTCGTGAGAATTGCCGGTGA+AGG | - | chr2_3:12216574-12216593 | Msa0279000:intron | 50.0% | |
| CATATCGGAAGCTCCTTCAC+CGG | + | chr2_3:12216590-12216609 | None:intergenic | 50.0% | |
| GAAGACGGGGAAAACCACAT+CGG | - | chr2_3:12217039-12217058 | Msa0279000:CDS | 50.0% | |
| GGGGAAAACCACATCGGATT+TGG | - | chr2_3:12217045-12217064 | Msa0279000:CDS | 50.0% | |
| !! | AACCACATCGGATTTGGTGG+CGG | - | chr2_3:12217051-12217070 | Msa0279000:CDS | 50.0% |
| !! | ATCGGATTTGGTGGCGGTTT+CGG | - | chr2_3:12217057-12217076 | Msa0279000:CDS | 50.0% |
| !! | GGAGATGAAGTTCTAGGGGA+GGG | + | chr2_3:12217250-12217269 | None:intergenic | 50.0% |
| !! | AGGAGATGAAGTTCTAGGGG+AGG | + | chr2_3:12217251-12217270 | None:intergenic | 50.0% |
| CCCCTAGAACTTCATCTCCT+AGG | - | chr2_3:12217251-12217270 | Msa0279000:CDS | 50.0% | |
| GGATTCAACACTGCACAGCT+CGG | + | chr2_3:12217482-12217501 | None:intergenic | 50.0% | |
| AAACAAGCCAAAAACGCCGC+CGG | - | chr2_3:12215842-12215861 | Msa0279000:three_prime_UTR | 50.0% | |
| GAGAATTCTGACTTTCCCGG+CGG | + | chr2_3:12215861-12215880 | None:intergenic | 50.0% | |
| !! | ACCGGATTTCTTTCTGAGGC+AGG | + | chr2_3:12215948-12215967 | None:intergenic | 50.0% |
| ACCACGGGTGAAAAGTAAGG+CGG | + | chr2_3:12216038-12216057 | None:intergenic | 50.0% | |
| ACAGAATTTCCCGACGATCG+GGG | - | chr2_3:12216119-12216138 | Msa0279000:CDS | 50.0% | |
| TTTCCGGTGAGAAAACTCGC+CGG | + | chr2_3:12216150-12216169 | None:intergenic | 50.0% | |
| GATCTTCGTCTTCCCATCGA+TGG | + | chr2_3:12216386-12216405 | None:intergenic | 50.0% | |
| CATCGCAACACCTCCATCAA+CGG | + | chr2_3:12216413-12216432 | None:intergenic | 50.0% | |
| TGAGTAACAGCAGTAGCCGT+TGG | + | chr2_3:12216442-12216461 | None:intergenic | 50.0% | |
| GGCAATTCTCACGAAACCTG+AGG | + | chr2_3:12216569-12216588 | None:intergenic | 50.0% | |
| TTCGTGAGAATTGCCGGTGA+AGG | - | chr2_3:12216574-12216593 | Msa0279000:intron | 50.0% | |
| CATATCGGAAGCTCCTTCAC+CGG | + | chr2_3:12216590-12216609 | None:intergenic | 50.0% | |
| GAAGACGGGGAAAACCACAT+CGG | - | chr2_3:12217039-12217058 | Msa0279000:CDS | 50.0% | |
| GGGGAAAACCACATCGGATT+TGG | - | chr2_3:12217045-12217064 | Msa0279000:CDS | 50.0% | |
| !! | AACCACATCGGATTTGGTGG+CGG | - | chr2_3:12217051-12217070 | Msa0279000:CDS | 50.0% |
| !! | ATCGGATTTGGTGGCGGTTT+CGG | - | chr2_3:12217057-12217076 | Msa0279000:CDS | 50.0% |
| !! | GGAGATGAAGTTCTAGGGGA+GGG | + | chr2_3:12217250-12217269 | None:intergenic | 50.0% |
| !! | AGGAGATGAAGTTCTAGGGG+AGG | + | chr2_3:12217251-12217270 | None:intergenic | 50.0% |
| CCCCTAGAACTTCATCTCCT+AGG | - | chr2_3:12217251-12217270 | Msa0279000:CDS | 50.0% | |
| GGATTCAACACTGCACAGCT+CGG | + | chr2_3:12217482-12217501 | None:intergenic | 50.0% | |
| AACAAGCCAAAAACGCCGCC+GGG | - | chr2_3:12215843-12215862 | Msa0279000:three_prime_UTR | 55.0% | |
| ! | ATTCTCTGCATTGACGGCGC+CGG | - | chr2_3:12215875-12215894 | Msa0279000:three_prime_UTR | 55.0% |
| GATTTCTTCGACGCCGTTGC+TGG | - | chr2_3:12215989-12216008 | Msa0279000:exon | 55.0% | |
| GCTTCATCGGCAGTGAACAG+AGG | + | chr2_3:12216073-12216092 | None:intergenic | 55.0% | |
| ! | TCTCCGGCGAGTTTTCTCAC+CGG | - | chr2_3:12216144-12216163 | Msa0279000:CDS | 55.0% |
| !! | ACCGTCGATTTCGAGAGCGT+CGG | + | chr2_3:12216293-12216312 | None:intergenic | 55.0% |
| AACGCCGTTAAGTCTCCCTC+AGG | - | chr2_3:12216550-12216569 | Msa0279000:intron | 55.0% | |
| CGGTGAAGGAGCTTCCGATA+TGG | - | chr2_3:12216588-12216607 | Msa0279000:intron | 55.0% | |
| AACCGCCACCAAATCCGATG+TGG | + | chr2_3:12217056-12217075 | None:intergenic | 55.0% | |
| AACAAGCCAAAAACGCCGCC+GGG | - | chr2_3:12215843-12215862 | Msa0279000:three_prime_UTR | 55.0% | |
| ! | ATTCTCTGCATTGACGGCGC+CGG | - | chr2_3:12215875-12215894 | Msa0279000:three_prime_UTR | 55.0% |
| GATTTCTTCGACGCCGTTGC+TGG | - | chr2_3:12215989-12216008 | Msa0279000:exon | 55.0% | |
| GCTTCATCGGCAGTGAACAG+AGG | + | chr2_3:12216073-12216092 | None:intergenic | 55.0% | |
| ! | TCTCCGGCGAGTTTTCTCAC+CGG | - | chr2_3:12216144-12216163 | Msa0279000:CDS | 55.0% |
| !! | ACCGTCGATTTCGAGAGCGT+CGG | + | chr2_3:12216293-12216312 | None:intergenic | 55.0% |
| AACGCCGTTAAGTCTCCCTC+AGG | - | chr2_3:12216550-12216569 | Msa0279000:intron | 55.0% | |
| CGGTGAAGGAGCTTCCGATA+TGG | - | chr2_3:12216588-12216607 | Msa0279000:intron | 55.0% | |
| AACCGCCACCAAATCCGATG+TGG | + | chr2_3:12217056-12217075 | None:intergenic | 55.0% | |
| ! | GACTTTCCCGGCGGCGTTTT+TGG | + | chr2_3:12215852-12215871 | None:intergenic | 60.0% |
| GAGGATGCCGTCGGTGTAAC+CGG | + | chr2_3:12215897-12215916 | None:intergenic | 60.0% | |
| GAGAGAGTGATTTCGCGGCG+AGG | + | chr2_3:12215916-12215935 | None:intergenic | 60.0% | |
| GGGTGAAAAGTAAGGCGGCG+AGG | + | chr2_3:12216033-12216052 | None:intergenic | 60.0% | |
| !! | GCCGCCTTACTTTTCACCCG+TGG | - | chr2_3:12216034-12216053 | Msa0279000:CDS | 60.0% |
| CGCGTGACGAGATCGTAGCA+GGG | + | chr2_3:12216247-12216266 | None:intergenic | 60.0% | |
| TCGGCGCGGGAGAAAACGAA+CGG | + | chr2_3:12216274-12216293 | None:intergenic | 60.0% | |
| GCCGACGCTCTCGAAATCGA+CGG | - | chr2_3:12216289-12216308 | Msa0279000:CDS | 60.0% | |
| TGCCACGTCAGCTGATCCAG+CGG | - | chr2_3:12216342-12216361 | Msa0279000:CDS | 60.0% | |
| !! | GGATTTGGTGGCGGTTTCGG+AGG | - | chr2_3:12217060-12217079 | Msa0279000:CDS | 60.0% |
| GGCGGTTTCGGAGGAGATGT+TGG | - | chr2_3:12217069-12217088 | Msa0279000:CDS | 60.0% | |
| ! | GACTTTCCCGGCGGCGTTTT+TGG | + | chr2_3:12215852-12215871 | None:intergenic | 60.0% |
| GAGGATGCCGTCGGTGTAAC+CGG | + | chr2_3:12215897-12215916 | None:intergenic | 60.0% | |
| GAGAGAGTGATTTCGCGGCG+AGG | + | chr2_3:12215916-12215935 | None:intergenic | 60.0% | |
| GGGTGAAAAGTAAGGCGGCG+AGG | + | chr2_3:12216033-12216052 | None:intergenic | 60.0% | |
| !! | GCCGCCTTACTTTTCACCCG+TGG | - | chr2_3:12216034-12216053 | Msa0279000:CDS | 60.0% |
| CGCGTGACGAGATCGTAGCA+GGG | + | chr2_3:12216247-12216266 | None:intergenic | 60.0% | |
| TCGGCGCGGGAGAAAACGAA+CGG | + | chr2_3:12216274-12216293 | None:intergenic | 60.0% | |
| GCCGACGCTCTCGAAATCGA+CGG | - | chr2_3:12216289-12216308 | Msa0279000:CDS | 60.0% | |
| TGCCACGTCAGCTGATCCAG+CGG | - | chr2_3:12216342-12216361 | Msa0279000:CDS | 60.0% | |
| !! | GGATTTGGTGGCGGTTTCGG+AGG | - | chr2_3:12217060-12217079 | Msa0279000:CDS | 60.0% |
| GGCGGTTTCGGAGGAGATGT+TGG | - | chr2_3:12217069-12217088 | Msa0279000:CDS | 60.0% | |
| TTTCGCGGCGAGGATGCCGT+CGG | + | chr2_3:12215906-12215925 | None:intergenic | 65.0% | |
| !! | TTCGACGCCGTTGCTGGCTC+CGG | - | chr2_3:12215995-12216014 | Msa0279000:exon | 65.0% |
| ACCGACACCGGAGCCAGCAA+CGG | + | chr2_3:12216005-12216024 | None:intergenic | 65.0% | |
| CCGGAGAATCCCCGATCGTC+GGG | + | chr2_3:12216131-12216150 | None:intergenic | 65.0% | |
| CCCGACGATCGGGGATTCTC+CGG | - | chr2_3:12216128-12216147 | Msa0279000:CDS | 65.0% | |
| GCCGGAGAATCCCCGATCGT+CGG | + | chr2_3:12216132-12216151 | None:intergenic | 65.0% | |
| GCGCGTGACGAGATCGTAGC+AGG | + | chr2_3:12216248-12216267 | None:intergenic | 65.0% | |
| !! | GATTTCGAGAGCGTCGGCGC+GGG | + | chr2_3:12216287-12216306 | None:intergenic | 65.0% |
| !! | CGATTTCGAGAGCGTCGGCG+CGG | + | chr2_3:12216288-12216307 | None:intergenic | 65.0% |
| AGCCGCTGGATCAGCTGACG+TGG | + | chr2_3:12216347-12216366 | None:intergenic | 65.0% | |
| TTTCGCGGCGAGGATGCCGT+CGG | + | chr2_3:12215906-12215925 | None:intergenic | 65.0% | |
| !! | TTCGACGCCGTTGCTGGCTC+CGG | - | chr2_3:12215995-12216014 | Msa0279000:exon | 65.0% |
| ACCGACACCGGAGCCAGCAA+CGG | + | chr2_3:12216005-12216024 | None:intergenic | 65.0% | |
| CCGGAGAATCCCCGATCGTC+GGG | + | chr2_3:12216131-12216150 | None:intergenic | 65.0% | |
| CCCGACGATCGGGGATTCTC+CGG | - | chr2_3:12216128-12216147 | Msa0279000:CDS | 65.0% | |
| GCCGGAGAATCCCCGATCGT+CGG | + | chr2_3:12216132-12216151 | None:intergenic | 65.0% | |
| GCGCGTGACGAGATCGTAGC+AGG | + | chr2_3:12216248-12216267 | None:intergenic | 65.0% | |
| !! | GATTTCGAGAGCGTCGGCGC+GGG | + | chr2_3:12216287-12216306 | None:intergenic | 65.0% |
| !! | CGATTTCGAGAGCGTCGGCG+CGG | + | chr2_3:12216288-12216307 | None:intergenic | 65.0% |
| AGCCGCTGGATCAGCTGACG+TGG | + | chr2_3:12216347-12216366 | None:intergenic | 65.0% | |
| !! | GACGGCGCCGGTTACACCGA+CGG | - | chr2_3:12215887-12215906 | Msa0279000:three_prime_UTR | 70.0% |
| !! | GCCGTTGCTGGCTCCGGTGT+CGG | - | chr2_3:12216001-12216020 | Msa0279000:CDS | 70.0% |
| !! | GTTGCTGGCTCCGGTGTCGG+TGG | - | chr2_3:12216004-12216023 | Msa0279000:CDS | 70.0% |
| GGCGAGGACTCCACCGACAC+CGG | + | chr2_3:12216017-12216036 | None:intergenic | 70.0% | |
| !! | GACGGCGCCGGTTACACCGA+CGG | - | chr2_3:12215887-12215906 | Msa0279000:three_prime_UTR | 70.0% |
| !! | GCCGTTGCTGGCTCCGGTGT+CGG | - | chr2_3:12216001-12216020 | Msa0279000:CDS | 70.0% |
| !! | GTTGCTGGCTCCGGTGTCGG+TGG | - | chr2_3:12216004-12216023 | Msa0279000:CDS | 70.0% |
| GGCGAGGACTCCACCGACAC+CGG | + | chr2_3:12216017-12216036 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 12215560 | 12217755 | 12215560 | ID=Msa0279000;Name=Msa0279000 |
| chr2_3 | mRNA | 12215560 | 12217755 | 12215560 | ID=Msa0279000-mRNA-1;Parent=Msa0279000;Name=Msa0279000-mRNA-1;_AED=0.00;_eAED=0.00;_QI=111|1|1|1|1|1|2|437|437 |
| chr2_3 | exon | 12215560 | 12216371 | 12215560 | ID=Msa0279000-mRNA-1:exon:5478;Parent=Msa0279000-mRNA-1 |
| chr2_3 | exon | 12216706 | 12217755 | 12216706 | ID=Msa0279000-mRNA-1:exon:5477;Parent=Msa0279000-mRNA-1 |
| chr2_3 | five_prime_UTR | 12217645 | 12217755 | 12217645 | ID=Msa0279000-mRNA-1:five_prime_utr;Parent=Msa0279000-mRNA-1 |
| chr2_3 | CDS | 12216706 | 12217644 | 12216706 | ID=Msa0279000-mRNA-1:cds;Parent=Msa0279000-mRNA-1 |
| chr2_3 | CDS | 12215997 | 12216371 | 12215997 | ID=Msa0279000-mRNA-1:cds;Parent=Msa0279000-mRNA-1 |
| chr2_3 | three_prime_UTR | 12215560 | 12215996 | 12215560 | ID=Msa0279000-mRNA-1:three_prime_utr;Parent=Msa0279000-mRNA-1 |
| Gene Sequence |
| Protein sequence |
