AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1457170

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1457170 MtrunA17_Chr6g0451571 95.224 335 10 2 1 330 1 334 0.0 651
Msa1457170 MtrunA17_Chr8g0364291 52.273 308 144 2 25 330 18 324 5.79e-121 351
Msa1457170 MtrunA17_Chr1g0197411 50.313 320 155 3 14 330 12 330 8.60e-118 343
Msa1457170 MtrunA17_Chr7g0225221 45.066 304 162 4 27 330 22 320 9.16e-91 274
Msa1457170 MtrunA17_Chr1g0148021 42.945 326 172 6 16 330 6 328 1.04e-87 266
Msa1457170 MtrunA17_Chr5g0401431 42.236 322 180 4 9 326 6 325 7.33e-85 259
Msa1457170 MtrunA17_Chr4g0046131 40.407 344 179 8 6 326 2 342 2.72e-82 253
Msa1457170 MtrunA17_Chr1g0204011 43.544 333 174 8 1 330 1 322 7.50e-81 248
Msa1457170 MtrunA17_Chr4g0072091 43.464 306 164 6 29 330 23 323 3.53e-77 239
Msa1457170 MtrunA17_Chr4g0053871 42.525 301 166 4 28 326 25 320 7.77e-77 238
Msa1457170 MtrunA17_Chr5g0405991 39.077 325 185 8 10 330 1 316 2.44e-68 216
Msa1457170 MtrunA17_Chr1g0188431 37.612 335 190 7 1 330 7 327 3.51e-68 216
Msa1457170 MtrunA17_Chr4g0075241 37.829 304 185 3 28 330 27 327 6.55e-68 215
Msa1457170 MtrunA17_Chr8g0371381 40.924 303 168 7 30 330 26 319 1.80e-66 211
Msa1457170 MtrunA17_Chr4g0068621 40.656 305 175 5 28 330 36 336 3.84e-66 211
Msa1457170 MtrunA17_Chr3g0114451 36.503 326 195 5 9 330 1 318 5.14e-66 210
Msa1457170 MtrunA17_Chr1g0164891 40.264 303 172 6 34 330 93 392 5.79e-66 213
Msa1457170 MtrunA17_Chr3g0129051 37.500 328 185 7 8 330 10 322 6.30e-65 207
Msa1457170 MtrunA17_Chr6g0477071 36.446 332 191 8 4 330 26 342 6.35e-65 208
Msa1457170 MtrunA17_Chr6g0460711 38.532 327 188 6 4 330 1 314 6.58e-65 207
Msa1457170 MtrunA17_Chr4g0074851 36.905 336 198 6 1 330 1 328 6.82e-65 208
Msa1457170 MtrunA17_Chr5g0432441 36.283 339 194 8 1 330 1 326 9.15e-65 207
Msa1457170 MtrunA17_Chr5g0404721 37.333 300 182 5 34 330 34 330 1.20e-64 207
Msa1457170 MtrunA17_Chr2g0320091 37.908 306 181 4 26 330 21 318 1.23e-64 207
Msa1457170 MtrunA17_Chr4g0013191 40.667 300 166 6 34 330 50 340 2.24e-64 207
Msa1457170 MtrunA17_Chr7g0244461 38.978 313 181 5 19 330 9 312 4.78e-64 205
Msa1457170 MtrunA17_Chr7g0254231 39.535 301 171 5 30 330 22 311 5.50e-64 205
Msa1457170 MtrunA17_Chr2g0292181 39.355 310 179 6 26 330 34 339 1.55e-63 205
Msa1457170 MtrunA17_Chr4g0024121 37.942 311 180 8 26 330 23 326 1.88e-63 204
Msa1457170 MtrunA17_Chr2g0292251 39.228 311 178 7 26 330 24 329 1.94e-63 205
Msa1457170 MtrunA17_Chr4g0013721 38.511 309 178 7 26 330 96 396 2.18e-63 206
Msa1457170 MtrunA17_Chr7g0254201 38.312 308 182 4 23 330 13 312 2.21e-63 203
Msa1457170 MtrunA17_Chr1g0157051 37.072 321 188 9 13 329 7 317 3.86e-63 203
Msa1457170 MtrunA17_Chr1g0213061 40.952 315 171 9 20 330 18 321 1.44e-62 202
Msa1457170 MtrunA17_Chr5g0400331 38.065 310 179 6 30 330 26 331 2.34e-62 201
Msa1457170 MtrunA17_Chr7g0268501 38.650 326 182 11 13 330 5 320 2.92e-62 201
Msa1457170 MtrunA17_Chr7g0268521 38.650 326 182 11 13 330 5 320 2.92e-62 201
Msa1457170 MtrunA17_Chr2g0292241 39.355 310 179 7 26 330 25 330 4.50e-62 201
Msa1457170 MtrunA17_Chr5g0438021 34.462 325 195 5 12 330 13 325 6.28e-62 200
Msa1457170 MtrunA17_Chr1g0194151 39.297 313 177 7 26 330 26 333 8.19e-62 200
Msa1457170 MtrunA17_Chr2g0292211 38.710 310 181 6 26 330 36 341 9.33e-62 201
Msa1457170 MtrunA17_Chr2g0292151 39.032 310 180 6 26 330 25 330 1.38e-61 200
Msa1457170 MtrunA17_Chr2g0320071 36.570 309 180 5 26 330 21 317 1.76e-61 198
Msa1457170 MtrunA17_Chr4g0013821 36.697 327 195 7 8 330 6 324 1.95e-61 199
Msa1457170 MtrunA17_Chr3g0106901 39.688 320 183 5 12 330 13 323 2.13e-61 198
Msa1457170 MtrunA17_Chr4g0013171 35.604 323 195 7 13 330 7 321 7.80e-61 197
Msa1457170 MtrunA17_Chr7g0258811 36.036 333 203 6 5 330 42 371 3.01e-60 197
Msa1457170 MtrunA17_Chr4g0076211 39.934 303 168 9 31 330 42 333 3.44e-60 196
Msa1457170 MtrunA17_Chr3g0128061 37.423 326 193 5 8 330 9 326 5.60e-60 195
Msa1457170 MtrunA17_Chr7g0244451 38.312 308 172 6 28 330 22 316 5.87e-60 194
Msa1457170 MtrunA17_Chr7g0224371 37.082 329 190 7 4 330 9 322 7.06e-60 194
Msa1457170 MtrunA17_Chr1g0181481 36.928 306 185 4 27 330 24 323 9.16e-60 194
Msa1457170 MtrunA17_Chr2g0296621 37.049 305 175 9 30 330 50 341 1.15e-59 194
Msa1457170 MtrunA17_Chr4g0013201 38.158 304 178 5 28 330 44 338 1.38e-59 194
Msa1457170 MtrunA17_Chr6g0467251 36.577 298 179 5 30 326 36 324 1.56e-59 194
Msa1457170 MtrunA17_Chr4g0038161 35.938 320 193 6 15 330 9 320 1.62e-59 194
Msa1457170 MtrunA17_Chr2g0320101 35.922 309 182 5 26 330 21 317 1.62e-59 193
Msa1457170 MtrunA17_Chr1g0181511 36.275 306 187 4 27 330 24 323 2.43e-59 193
Msa1457170 MtrunA17_Chr8g0372601 36.275 306 189 5 28 330 28 330 2.56e-59 193
Msa1457170 MtrunA17_Chr1g0194271 37.736 318 182 6 26 330 26 340 2.71e-59 194
Msa1457170 MtrunA17_Chr3g0107881 38.264 311 177 8 26 330 23 324 2.87e-59 193
Msa1457170 MtrunA17_Chr2g0292091 37.013 308 185 7 28 330 22 325 4.30e-59 193
Msa1457170 MtrunA17_Chr2g0322861 36.533 323 191 9 16 330 70 386 6.17e-59 194
Msa1457170 MtrunA17_Chr3g0106921 34.405 311 193 6 23 330 18 320 8.63e-59 192
Msa1457170 MtrunA17_Chr5g0402571 34.154 325 201 5 12 330 9 326 1.07e-58 192
Msa1457170 MtrunA17_Chr4g0070951 37.273 330 185 10 9 330 14 329 1.33e-58 191
Msa1457170 MtrunA17_Chr3g0129061 35.258 329 191 6 8 330 10 322 1.81e-58 191
Msa1457170 MtrunA17_Chr5g0402581 34.462 325 200 5 12 330 9 326 1.82e-58 191
Msa1457170 MtrunA17_Chr2g0320061 35.161 310 184 6 26 330 21 318 4.21e-58 190
Msa1457170 MtrunA17_Chr4g0038151 36.066 305 189 4 27 330 22 321 1.09e-57 189
Msa1457170 MtrunA17_Chr2g0320031 34.756 328 200 6 4 330 5 319 1.73e-57 188
Msa1457170 MtrunA17_Chr1g0181431 35.410 305 189 4 28 330 25 323 2.01e-57 188
Msa1457170 MtrunA17_Chr2g0279041 35.692 325 195 7 12 330 9 325 3.79e-57 187
Msa1457170 MtrunA17_Chr3g0129041 34.557 327 195 6 10 330 9 322 5.71e-57 187
Msa1457170 MtrunA17_Chr4g0013181 34.036 332 209 6 1 330 30 353 2.37e-56 186
Msa1457170 MtrunA17_Chr2g0292261 36.129 310 189 6 26 330 25 330 2.39e-56 186
Msa1457170 MtrunA17_Chr4g0043391 34.259 324 200 7 12 330 9 324 5.54e-56 184
Msa1457170 MtrunA17_Chr3g0136751 34.557 327 203 5 8 330 3 322 7.00e-56 184
Msa1457170 MtrunA17_Chr2g0320051 35.161 310 184 6 26 330 21 318 1.48e-55 183
Msa1457170 MtrunA17_Chr2g0292111 36.774 310 187 6 26 330 25 330 2.64e-55 184
Msa1457170 MtrunA17_Chr4g0038171 35.220 318 199 6 15 330 9 321 3.02e-55 182
Msa1457170 MtrunA17_Chr2g0292271 35.135 333 204 7 3 330 5 330 4.92e-55 183
Msa1457170 MtrunA17_Chr2g0291751 36.656 311 186 7 26 330 25 330 6.83e-55 182
Msa1457170 MtrunA17_Chr2g0292101 36.538 312 181 7 28 330 23 326 1.13e-54 182
Msa1457170 MtrunA17_Chr2g0292291 34.505 313 191 5 26 330 26 332 1.64e-54 181
Msa1457170 MtrunA17_Chr5g0432341 36.308 325 189 9 12 330 9 321 2.97e-54 180
Msa1457170 MtrunA17_Chr2g0299691 35.780 327 193 7 15 330 38 358 3.09e-54 181
Msa1457170 MtrunA17_Chr1g0175561 36.957 322 190 11 16 330 11 326 3.66e-54 180
Msa1457170 MtrunA17_Chr5g0413051 37.134 307 177 8 34 330 77 377 3.70e-54 181
Msa1457170 MtrunA17_Chr5g0432351 35.692 325 191 9 12 330 9 321 4.06e-54 180
Msa1457170 MtrunA17_Chr5g0432331 34.036 332 203 8 5 330 31 352 2.49e-53 179
Msa1457170 MtrunA17_Chr6g0467121 36.213 301 181 5 30 330 74 363 7.16e-53 178
Msa1457170 MtrunA17_Chr4g0063671 35.385 325 188 9 17 330 7 320 6.72e-52 174
Msa1457170 MtrunA17_Chr2g0329641 37.338 308 180 7 29 330 35 335 1.02e-51 174
Msa1457170 MtrunA17_Chr5g0421411 36.268 284 169 7 55 330 6 285 9.48e-51 170
Msa1457170 MtrunA17_Chr1g0155611 34.967 306 190 6 30 330 46 347 1.32e-50 171
Msa1457170 MtrunA17_Chr6g0467161 33.223 301 192 5 30 330 45 336 1.47e-50 171
Msa1457170 MtrunA17_Chr2g0279061 38.077 260 148 6 77 330 14 266 4.92e-47 159
Msa1457170 MtrunA17_Chr2g0278671 34.395 314 187 8 26 330 20 323 4.10e-46 159
Msa1457170 MtrunA17_Chr2g0316791 33.433 335 187 9 28 329 74 405 1.30e-45 160
Msa1457170 MtrunA17_Chr2g0316481 32.836 335 189 9 28 329 74 405 4.75e-45 158
Msa1457170 MtrunA17_Chr2g0316191 32.440 336 190 8 28 329 74 406 1.27e-44 157
Msa1457170 MtrunA17_Chr2g0316831 32.836 335 189 9 28 329 110 441 1.32e-44 158
Msa1457170 MtrunA17_Chr2g0311251 32.537 335 189 9 28 329 9 339 8.41e-42 148
Msa1457170 MtrunA17_Chr2g0311241 30.851 376 182 11 28 329 58 429 5.74e-40 145
Msa1457170 MtrunA17_Chr3g0114461 39.378 193 110 3 139 330 6 192 9.48e-39 135
Msa1457170 MtrunA17_Chr5g0432401 30.864 324 169 8 12 329 11 285 1.34e-37 135
Msa1457170 MtrunA17_Chr4g0004591 28.349 321 167 5 30 329 77 355 2.68e-34 128
Msa1457170 MtrunA17_Chr2g0292281 33.810 210 124 4 125 330 18 216 4.73e-32 119
Msa1457170 MtrunA17_Chr2g0316811 38.372 172 101 3 28 197 48 216 5.88e-31 119
Msa1457170 MtrunA17_Chr2g0316141 30.741 270 167 5 77 329 11 277 2.58e-27 108
Msa1457170 MtrunA17_Chr2g0316181 30.741 270 167 5 77 329 11 277 2.58e-27 108
Msa1457170 MtrunA17_Chr1g0181501 34.715 193 116 4 142 330 3 189 1.53e-25 101
Msa1457170 MtrunA17_Chr1g0181491 37.600 125 74 3 27 151 9 129 1.71e-19 83.6
Msa1457170 MtrunA17_Chr3g0114491 37.069 116 71 2 27 142 15 128 3.25e-18 79.7
Msa1457170 MtrunA17_Chr7g0254181 43.396 106 55 3 93 198 22 122 1.57e-17 78.6
Msa1457170 MtrunA17_Chr3g0137751 26.217 267 134 7 53 309 97 310 2.69e-16 78.6
Msa1457170 MtrunA17_Chr5g0432321 31.707 123 77 2 153 275 17 132 5.19e-15 70.9
Msa1457170 MtrunA17_Chr4g0013811 33.333 78 52 0 138 215 1 78 1.75e-12 62.4
Msa1457170 MtrunA17_Chr7g0254171 42.466 73 40 1 77 149 4 74 4.42e-12 62.8
Msa1457170 MtrunA17_Chr1g0196191 57.377 61 24 1 77 137 31 89 8.94e-12 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1457170 AT5G40150.1 64.918 305 103 2 26 330 28 328 5.70e-152 430
Msa1457170 AT3G28200.1 64.918 305 102 2 26 330 17 316 1.24e-150 426
Msa1457170 AT5G47000.1 55.482 301 131 2 30 330 33 330 4.81e-123 357
Msa1457170 AT1G24110.1 53.420 307 141 2 25 330 17 322 5.14e-121 351
Msa1457170 AT4G17690.1 55.482 301 130 2 30 330 26 322 3.01e-120 349
Msa1457170 AT4G37530.1 44.872 312 166 4 23 330 20 329 4.10e-90 273
Msa1457170 AT5G14130.1 42.724 323 177 5 12 330 12 330 1.22e-87 266
Msa1457170 AT5G14130.2 42.724 323 177 5 12 330 53 371 3.41e-87 266
Msa1457170 AT4G37520.1 43.648 307 167 4 28 330 25 329 4.49e-86 262
Msa1457170 AT5G67400.1 43.689 309 168 4 26 330 23 329 9.60e-86 261
Msa1457170 AT4G37520.2 43.648 307 164 5 28 330 25 326 5.69e-84 257
Msa1457170 AT2G18980.1 41.284 327 177 6 8 330 8 323 1.13e-81 251
Msa1457170 AT3G49960.1 41.748 309 174 4 26 330 23 329 4.32e-80 247
Msa1457170 AT4G37530.2 45.627 263 137 4 23 281 20 280 6.67e-77 237
Msa1457170 AT4G30170.1 40.717 307 172 5 28 330 25 325 3.87e-76 237
Msa1457170 AT2G34060.1 37.685 337 191 7 8 326 7 342 8.32e-72 226
Msa1457170 AT5G51890.1 40.379 317 175 8 12 323 8 315 1.27e-70 223
Msa1457170 AT5G17820.1 39.403 335 175 9 1 330 2 313 4.15e-70 221
Msa1457170 AT3G17070.1 39.935 308 172 7 30 330 38 339 7.90e-70 221
Msa1457170 AT5G17820.2 39.403 335 175 9 1 330 55 366 4.03e-69 220
Msa1457170 AT4G33420.1 38.050 318 181 6 15 330 22 325 1.65e-67 214
Msa1457170 AT1G05260.1 37.231 325 192 8 10 330 9 325 5.67e-67 213
Msa1457170 AT4G33420.2 38.050 318 181 6 15 330 69 372 6.83e-67 214
Msa1457170 AT5G66390.1 40.864 301 170 6 34 330 37 333 1.02e-66 213
Msa1457170 AT4G36430.1 38.889 306 179 6 29 330 29 330 1.06e-66 213
Msa1457170 AT4G31760.1 36.254 331 196 6 4 330 7 326 7.20e-66 211
Msa1457170 AT4G11290.1 38.217 314 183 8 23 330 18 326 5.82e-65 208
Msa1457170 AT5G05340.1 36.774 310 178 5 27 330 27 324 6.89e-65 208
Msa1457170 AT4G16270.1 38.961 308 174 9 30 330 48 348 8.44e-65 208
Msa1457170 AT5G19880.1 37.758 339 192 7 1 330 1 329 2.71e-64 206
Msa1457170 AT2G22420.1 38.816 304 168 8 34 330 27 319 4.25e-64 206
Msa1457170 AT2G18150.1 37.209 301 181 6 34 330 40 336 6.94e-64 206
Msa1457170 AT3G50990.1 37.864 309 184 6 26 330 37 341 3.58e-63 204
Msa1457170 AT2G18140.1 37.086 302 182 6 33 330 38 335 3.89e-63 204
Msa1457170 AT2G24800.1 36.808 307 184 4 28 330 29 329 1.77e-62 202
Msa1457170 AT1G71695.1 37.086 302 183 4 30 330 44 339 6.25e-62 201
Msa1457170 AT4G21960.1 37.785 307 183 4 26 330 27 327 1.12e-61 200
Msa1457170 AT4G08770.1 38.486 317 184 8 21 330 15 327 2.07e-61 199
Msa1457170 AT2G37130.1 36.013 311 190 5 23 330 23 327 9.03e-61 197
Msa1457170 AT1G14540.1 36.156 307 188 5 25 330 16 315 1.27e-60 197
Msa1457170 AT3G21770.1 36.688 308 186 7 23 326 22 324 2.14e-60 196
Msa1457170 AT2G37130.2 36.755 302 182 5 32 330 1 296 2.60e-60 195
Msa1457170 AT4G08780.1 38.095 315 184 8 23 330 17 327 1.05e-59 195
Msa1457170 AT5G42180.1 36.076 316 186 8 19 329 12 316 1.16e-59 194
Msa1457170 AT3G03670.1 35.758 330 198 6 4 330 3 321 1.36e-59 194
Msa1457170 AT2G38380.1 36.452 310 189 6 26 330 27 333 1.58e-59 195
Msa1457170 AT1G30870.1 39.414 307 168 10 30 330 51 345 3.14e-59 194
Msa1457170 AT5G06720.1 36.095 338 203 9 1 330 1 333 4.66e-59 193
Msa1457170 AT5G06730.1 35.608 337 207 7 1 330 1 334 6.52e-59 193
Msa1457170 AT1G05240.1 38.158 304 173 8 30 326 26 321 6.67e-59 192
Msa1457170 AT1G05250.1 38.158 304 173 8 30 326 26 321 6.67e-59 192
Msa1457170 AT2G35380.1 38.762 307 173 7 34 330 34 335 7.42e-59 192
Msa1457170 AT3G01190.1 36.012 336 194 9 1 330 1 321 2.07e-58 191
Msa1457170 AT2G38390.1 37.299 311 185 7 26 330 27 333 2.64e-58 192
Msa1457170 AT1G68850.1 35.103 339 196 10 9 330 4 335 6.13e-58 190
Msa1457170 AT3G32980.1 35.220 318 197 6 19 330 20 334 8.43e-58 191
Msa1457170 AT1G14550.1 35.494 324 198 7 10 330 6 321 2.96e-57 188
Msa1457170 AT5G64110.1 37.748 302 174 7 34 330 38 330 3.25e-57 188
Msa1457170 AT3G49120.1 34.906 318 198 6 19 330 21 335 4.79e-57 189
Msa1457170 AT5G58390.1 35.144 313 182 7 26 330 17 316 2.30e-56 186
Msa1457170 AT5G58400.1 34.259 324 196 7 13 330 13 325 2.72e-56 186
Msa1457170 AT5G64120.1 35.526 304 187 6 28 330 33 328 3.69e-56 186
Msa1457170 AT4G33870.1 33.143 350 195 5 16 329 54 400 9.21e-56 187
Msa1457170 AT3G49110.1 34.591 318 199 6 19 330 22 336 1.78e-55 184
Msa1457170 AT2G39040.1 38.339 313 179 9 27 330 43 350 3.11e-55 184
Msa1457170 AT5G39580.1 38.158 304 172 8 32 330 27 319 4.53e-55 182
Msa1457170 AT3G17070.2 39.464 261 146 6 77 330 21 276 1.25e-54 180
Msa1457170 AT5G15180.1 34.897 341 199 10 1 330 1 329 4.28e-54 180
Msa1457170 AT1G44970.1 34.936 312 186 7 28 330 43 346 1.04e-53 179
Msa1457170 AT1G34510.1 35.913 323 188 8 10 330 4 309 1.47e-53 178
Msa1457170 AT1G49570.1 34.754 305 189 5 28 326 46 346 2.17e-53 179
Msa1457170 AT4G26010.1 33.540 322 197 8 10 330 4 309 1.82e-52 175
Msa1457170 AT4G26010.2 33.540 322 197 8 10 330 32 337 3.90e-52 175
Msa1457170 AT5G19890.1 34.727 311 186 9 27 330 27 327 5.42e-51 172
Msa1457170 AT5G64100.1 36.184 304 178 8 32 330 39 331 2.12e-50 171
Msa1457170 AT4G25980.1 33.431 341 199 10 1 330 3 326 3.11e-50 170
Msa1457170 AT2G41480.1 34.043 329 196 8 12 330 11 328 1.71e-49 168
Msa1457170 AT2G43480.1 35.849 318 188 8 21 330 26 335 4.33e-49 167
Msa1457170 AT5G24070.1 35.484 310 184 7 29 330 34 335 1.99e-48 166
Msa1457170 AT5G22410.1 34.539 304 184 9 29 326 27 321 8.71e-48 164
Msa1457170 AT1G77100.1 33.030 330 198 10 10 330 4 319 3.90e-44 154
Msa1457170 AT2G35380.2 38.627 233 132 4 107 330 17 247 6.49e-43 149
Msa1457170 AT2G24800.2 39.412 170 97 3 28 197 29 192 4.66e-33 123
Msa1457170 AT4G25980.2 35.678 199 114 6 2 199 49 234 1.42e-28 112
Msa1457170 AT5G39580.2 35.176 199 120 5 11 209 8 197 4.62e-27 107
Msa1457170 AT4G32320.1 26.786 280 136 7 40 309 99 319 2.33e-17 82.0
Msa1457170 AT4G08390.2 30.151 199 110 4 125 315 186 363 2.72e-16 79.3
Msa1457170 AT4G08390.5 30.151 199 110 4 125 315 186 363 2.72e-16 79.3
Msa1457170 AT4G08390.1 30.151 199 110 4 125 315 186 363 2.72e-16 79.3
Msa1457170 AT4G08390.3 30.151 199 110 4 125 315 185 362 2.78e-16 79.3
Msa1457170 AT3G42570.1 41.935 93 53 1 108 199 57 149 7.65e-16 73.9
Msa1457170 AT1G07890.2 30.256 195 93 6 124 313 90 246 2.60e-14 72.0
Msa1457170 AT1G07890.8 30.256 195 93 6 124 313 90 246 2.60e-14 72.0
Msa1457170 AT1G07890.4 30.256 195 93 6 124 313 90 246 2.60e-14 72.0
Msa1457170 AT1G07890.7 30.256 195 93 6 124 313 90 246 2.60e-14 72.0
Msa1457170 AT1G07890.1 30.256 195 93 6 124 313 90 246 2.60e-14 72.0
Msa1457170 AT1G07890.3 30.256 195 93 6 124 313 90 246 2.60e-14 72.0
Msa1457170 AT1G07890.5 30.256 195 93 6 124 313 90 246 2.60e-14 72.0
Msa1457170 AT1G07890.6 30.256 195 93 6 124 313 90 246 2.77e-14 72.0
Msa1457170 AT3G09640.2 27.230 213 112 6 105 313 73 246 2.93e-14 72.0
Msa1457170 AT3G09640.1 27.230 213 112 6 105 313 73 246 2.93e-14 72.0

Find 67 sgRNAs with CRISPR-Local

Find 164 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGATCAAGATTATTTCTTTA+AGG 0.143575 tig0038499:+21367 Msa1457170:CDS
CAGAATTTACCTAAAGGTTT+AGG 0.165196 tig0038499:+21275 Msa1457170:CDS
TAAACATTATCAAACTTATT+TGG 0.189105 tig0038499:-21248 None:intergenic
AGAATTTACCTAAAGGTTTA+GGG 0.281875 tig0038499:+21276 Msa1457170:CDS
TACAACAATTCTTCTGGTTC+TGG 0.286642 tig0038499:+21128 Msa1457170:CDS
TTTAACCCTTCAACAAATCT+TGG 0.291351 tig0038499:-21164 None:intergenic
GATATTTACAACAATTCTTC+TGG 0.318776 tig0038499:+21122 Msa1457170:CDS
TTCAAAACCCCTAAACCTTT+AGG 0.320573 tig0038499:-21284 None:intergenic
TGTTTGTTTGTAGTAATCTA+AGG 0.321314 tig0038499:-20580 None:intergenic
AGTTTCAATATTCGCGAAAC+GGG 0.324305 tig0038499:+21022 Msa1457170:CDS
CACGTTCAGCTTTGTTGAAA+GGG 0.328180 tig0038499:-20749 None:intergenic
AATTCTTCTGGTTCTGGTTC+AGG 0.343705 tig0038499:+21134 Msa1457170:CDS
GACATCAACCTCTCTCTTCC+AGG 0.344076 tig0038499:+20777 Msa1457170:CDS
GAAGAAATGGTTGCTTTATC+TGG 0.356535 tig0038499:+21056 Msa1457170:CDS
GTCATTGTCATTGACGGCTT+TGG 0.370495 tig0038499:-20993 None:intergenic
ACGGAGAGTGGCGGCGGCGG+TGG 0.370801 tig0038499:-20664 None:intergenic
CGGCGGCGGTGGTTGGAGAT+TGG 0.376609 tig0038499:-20653 None:intergenic
TTAGCAAATCTTTCCACAAA+AGG 0.403926 tig0038499:-21344 None:intergenic
ATCTGTGTCATTGTCATTGA+CGG 0.409866 tig0038499:-20999 None:intergenic
TCACATTGTAGTGAAATTAG+TGG 0.412518 tig0038499:+21098 Msa1457170:CDS
TCCACAAAAGGCTTAGTTGA+AGG 0.418442 tig0038499:-21332 None:intergenic
GAGACGGAGAGTGGCGGCGG+CGG 0.421113 tig0038499:-20667 None:intergenic
AGAGTGGCGGCGGCGGTGGT+TGG 0.426793 tig0038499:-20660 None:intergenic
GAAGAGACGGAGAGTGGCGG+CGG 0.442594 tig0038499:-20670 None:intergenic
TTATCTGGTGCTCATACAGT+TGG 0.446715 tig0038499:+21071 Msa1457170:CDS
TCACGTTCAGCTTTGTTGAA+AGG 0.455448 tig0038499:-20750 None:intergenic
ACAGAGGCGTCGCAGCCGTT+AGG 0.456431 tig0038499:-20711 None:intergenic
CGTGATCTTCTTATCATGCT+TGG 0.474261 tig0038499:+20894 Msa1457170:CDS
GCAAGAGACAGTGTTGGGAC+AGG 0.474541 tig0038499:-20847 None:intergenic
TGTTGAAAGGGGTTGAAGAG+AGG 0.484577 tig0038499:-20737 None:intergenic
GATTAGAAGAAGATGTGATC+AGG 0.486639 tig0038499:+21451 Msa1457170:CDS
CGTCGCAGCCGTTAGGGAGG+AGG 0.494004 tig0038499:-20704 None:intergenic
GAATGTTCAAACTGGTAGGA+AGG 0.500115 tig0038499:+21424 Msa1457170:CDS
CTCGGCCGTCGTGACGGCCG+AGG 0.501949 tig0038499:+20939 Msa1457170:CDS
TCTGTGTCATCTGCCGTTGA+CGG 0.502316 tig0038499:+20963 Msa1457170:CDS
TATAATCCAAGATTTGTTGA+AGG 0.505931 tig0038499:+21158 Msa1457170:CDS
TGAATGATTTGTTCGAATTG+TGG 0.511315 tig0038499:-20606 None:intergenic
TAGTTTCAATATTCGCGAAA+CGG 0.511725 tig0038499:+21021 Msa1457170:CDS
TCAGAGCAAGAGACAGTGTT+GGG 0.512165 tig0038499:-20852 None:intergenic
ATGAGGTCAAAGGAGTCTCC+TGG 0.515886 tig0038499:-20795 None:intergenic
GGCAATCGTGGAGGAAGAGA+CGG 0.531026 tig0038499:-20683 None:intergenic
ATAATCCAAGATTTGTTGAA+GGG 0.533288 tig0038499:+21159 Msa1457170:CDS
CTCGGCCGTCACGACGGCCG+AGG 0.533748 tig0038499:-20938 None:intergenic
TGAAAGGGGTTGAAGAGAGG+AGG 0.534695 tig0038499:-20734 None:intergenic
GATCTTCTTATCATGCTTGG+TGG 0.554628 tig0038499:+20897 Msa1457170:CDS
AATGTTCAAACTGGTAGGAA+GGG 0.561658 tig0038499:+21425 Msa1457170:CDS
AGGCGTCGCAGCCGTTAGGG+AGG 0.564118 tig0038499:-20707 None:intergenic
ACGTTCAGCTTTGTTGAAAG+GGG 0.574965 tig0038499:-20748 None:intergenic
CACGATTGCCTCCTCCCTAA+CGG 0.580686 tig0038499:+20696 Msa1457170:CDS
GATACGTACGATGAGGTCAA+AGG 0.582070 tig0038499:-20805 None:intergenic
CCTCATTACAATGTTTACCT+CGG 0.591829 tig0038499:+20921 Msa1457170:CDS
GAATTTACCTAAAGGTTTAG+GGG 0.612906 tig0038499:+21277 Msa1457170:CDS
GTCAGAGCAAGAGACAGTGT+TGG 0.614569 tig0038499:-20853 None:intergenic
CTTTGGAAGAAAGCCGTCAA+CGG 0.615992 tig0038499:-20976 None:intergenic
AGGAGTCTCCTGGAAGAGAG+AGG 0.623254 tig0038499:-20785 None:intergenic
CGTTAGGGAGGAGGCAATCG+TGG 0.624552 tig0038499:-20695 None:intergenic
CAGAACCTCGGCCGTCACGA+CGG 0.627855 tig0038499:-20944 None:intergenic
GTTTCAATATTCGCGAAACG+GGG 0.630647 tig0038499:+21023 Msa1457170:CDS
GAGGAAGAGACGGAGAGTGG+CGG 0.632804 tig0038499:-20673 None:intergenic
CGGCAGATGACACAGAACCT+CGG 0.640173 tig0038499:-20956 None:intergenic
GATCACGTGTAGCTGTAGCA+AGG 0.646540 tig0038499:-20878 None:intergenic
CCGAGGTAAACATTGTAATG+AGG 0.647436 tig0038499:-20921 None:intergenic
GGGACAGGAGAGTTCAAGAG+CGG 0.649529 tig0038499:-20832 None:intergenic
GGTTGAAGAGAGGAGGACAG+AGG 0.652406 tig0038499:-20727 None:intergenic
GTGGAGGAAGAGACGGAGAG+TGG 0.675907 tig0038499:-20676 None:intergenic
TAGGGAGGAGGCAATCGTGG+AGG 0.693205 tig0038499:-20692 None:intergenic
GAAGGGTTAAAGAAAGCTTG+TGG 0.742356 tig0038499:+21176 Msa1457170:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAACATTATCAAACTTATT+TGG - tig0038499:21251-21270 None:intergenic 15.0%
!! TAAACATTATCAAACTTATT+TGG - tig0038499:21251-21270 None:intergenic 15.0%
!!! TATTTTCAGAATTTACCTAA+AGG + tig0038499:21269-21288 Msa1457170:CDS 20.0%
!!! TATTTTCAGAATTTACCTAA+AGG + tig0038499:21269-21288 Msa1457170:CDS 20.0%
!!! ATCTAAGGTTAGTTTTGATT+CGG - tig0038499:20568-20587 None:intergenic 25.0%
! TGTTTGTTTGTAGTAATCTA+AGG - tig0038499:20583-20602 None:intergenic 25.0%
! GATATTTACAACAATTCTTC+TGG + tig0038499:21122-21141 Msa1457170:CDS 25.0%
!!! TATAATCCAAGATTTGTTGA+AGG + tig0038499:21158-21177 Msa1457170:CDS 25.0%
!!! ATAATCCAAGATTTGTTGAA+GGG + tig0038499:21159-21178 Msa1457170:CDS 25.0%
! TCATTAAAAACAGACAAAGT+AGG - tig0038499:21218-21237 None:intergenic 25.0%
! AGAATTTACCTAAAGGTTTA+GGG + tig0038499:21276-21295 Msa1457170:CDS 25.0%
!! GGATCAAGATTATTTCTTTA+AGG + tig0038499:21367-21386 Msa1457170:CDS 25.0%
!!! ATCTAAGGTTAGTTTTGATT+CGG - tig0038499:20568-20587 None:intergenic 25.0%
! TGTTTGTTTGTAGTAATCTA+AGG - tig0038499:20583-20602 None:intergenic 25.0%
! GATATTTACAACAATTCTTC+TGG + tig0038499:21122-21141 Msa1457170:CDS 25.0%
!!! TATAATCCAAGATTTGTTGA+AGG + tig0038499:21158-21177 Msa1457170:CDS 25.0%
!!! ATAATCCAAGATTTGTTGAA+GGG + tig0038499:21159-21178 Msa1457170:CDS 25.0%
! TCATTAAAAACAGACAAAGT+AGG - tig0038499:21218-21237 None:intergenic 25.0%
! AGAATTTACCTAAAGGTTTA+GGG + tig0038499:21276-21295 Msa1457170:CDS 25.0%
!! GGATCAAGATTATTTCTTTA+AGG + tig0038499:21367-21386 Msa1457170:CDS 25.0%
!! TGAATGATTTGTTCGAATTG+TGG - tig0038499:20609-20628 None:intergenic 30.0%
TAGTTTCAATATTCGCGAAA+CGG + tig0038499:21021-21040 Msa1457170:CDS 30.0%
TCACATTGTAGTGAAATTAG+TGG + tig0038499:21098-21117 Msa1457170:CDS 30.0%
TTTAACCCTTCAACAAATCT+TGG - tig0038499:21167-21186 None:intergenic 30.0%
CAGAATTTACCTAAAGGTTT+AGG + tig0038499:21275-21294 Msa1457170:CDS 30.0%
GAATTTACCTAAAGGTTTAG+GGG + tig0038499:21277-21296 Msa1457170:CDS 30.0%
TTAGCAAATCTTTCCACAAA+AGG - tig0038499:21347-21366 None:intergenic 30.0%
!!! TTTTGTGGAAAGATTTGCTA+AGG + tig0038499:21346-21365 Msa1457170:CDS 30.0%
! AGTCTTTTGAATGTTCAAAC+TGG + tig0038499:21416-21435 Msa1457170:CDS 30.0%
! TTTTGAATGTTCAAACTGGT+AGG + tig0038499:21420-21439 Msa1457170:CDS 30.0%
!! TGAATGATTTGTTCGAATTG+TGG - tig0038499:20609-20628 None:intergenic 30.0%
TAGTTTCAATATTCGCGAAA+CGG + tig0038499:21021-21040 Msa1457170:CDS 30.0%
TCACATTGTAGTGAAATTAG+TGG + tig0038499:21098-21117 Msa1457170:CDS 30.0%
TTTAACCCTTCAACAAATCT+TGG - tig0038499:21167-21186 None:intergenic 30.0%
CAGAATTTACCTAAAGGTTT+AGG + tig0038499:21275-21294 Msa1457170:CDS 30.0%
GAATTTACCTAAAGGTTTAG+GGG + tig0038499:21277-21296 Msa1457170:CDS 30.0%
TTAGCAAATCTTTCCACAAA+AGG - tig0038499:21347-21366 None:intergenic 30.0%
!!! TTTTGTGGAAAGATTTGCTA+AGG + tig0038499:21346-21365 Msa1457170:CDS 30.0%
! AGTCTTTTGAATGTTCAAAC+TGG + tig0038499:21416-21435 Msa1457170:CDS 30.0%
! TTTTGAATGTTCAAACTGGT+AGG + tig0038499:21420-21439 Msa1457170:CDS 30.0%
CCTCATTACAATGTTTACCT+CGG + tig0038499:20921-20940 Msa1457170:CDS 35.0%
! ATCTGTGTCATTGTCATTGA+CGG - tig0038499:21002-21021 None:intergenic 35.0%
AGTTTCAATATTCGCGAAAC+GGG + tig0038499:21022-21041 Msa1457170:CDS 35.0%
! GGGTTTTACAGTTGAAGAAA+TGG + tig0038499:21043-21062 Msa1457170:CDS 35.0%
! GAAGAAATGGTTGCTTTATC+TGG + tig0038499:21056-21075 Msa1457170:CDS 35.0%
!! TACAACAATTCTTCTGGTTC+TGG + tig0038499:21128-21147 Msa1457170:CDS 35.0%
TTCAAAACCCCTAAACCTTT+AGG - tig0038499:21287-21306 None:intergenic 35.0%
AATGTTCAAACTGGTAGGAA+GGG + tig0038499:21425-21444 Msa1457170:CDS 35.0%
GATTAGAAGAAGATGTGATC+AGG + tig0038499:21451-21470 Msa1457170:CDS 35.0%
CCTCATTACAATGTTTACCT+CGG + tig0038499:20921-20940 Msa1457170:CDS 35.0%
! ATCTGTGTCATTGTCATTGA+CGG - tig0038499:21002-21021 None:intergenic 35.0%
AGTTTCAATATTCGCGAAAC+GGG + tig0038499:21022-21041 Msa1457170:CDS 35.0%
! GGGTTTTACAGTTGAAGAAA+TGG + tig0038499:21043-21062 Msa1457170:CDS 35.0%
! GAAGAAATGGTTGCTTTATC+TGG + tig0038499:21056-21075 Msa1457170:CDS 35.0%
!! TACAACAATTCTTCTGGTTC+TGG + tig0038499:21128-21147 Msa1457170:CDS 35.0%
TTCAAAACCCCTAAACCTTT+AGG - tig0038499:21287-21306 None:intergenic 35.0%
AATGTTCAAACTGGTAGGAA+GGG + tig0038499:21425-21444 Msa1457170:CDS 35.0%
GATTAGAAGAAGATGTGATC+AGG + tig0038499:21451-21470 Msa1457170:CDS 35.0%
!!! GTTTTGATTCGGAGAGGTTA+AGG - tig0038499:20557-20576 None:intergenic 40.0%
!!! AGGTTAGTTTTGATTCGGAG+AGG - tig0038499:20563-20582 None:intergenic 40.0%
! TGGAGATTGGATCTGTTTTG+AGG - tig0038499:20643-20662 None:intergenic 40.0%
!! ACGTTCAGCTTTGTTGAAAG+GGG - tig0038499:20751-20770 None:intergenic 40.0%
!! CACGTTCAGCTTTGTTGAAA+GGG - tig0038499:20752-20771 None:intergenic 40.0%
!! TCACGTTCAGCTTTGTTGAA+AGG - tig0038499:20753-20772 None:intergenic 40.0%
CGTGATCTTCTTATCATGCT+TGG + tig0038499:20894-20913 Msa1457170:CDS 40.0%
GATCTTCTTATCATGCTTGG+TGG + tig0038499:20897-20916 Msa1457170:CDS 40.0%
CCGAGGTAAACATTGTAATG+AGG - tig0038499:20924-20943 None:intergenic 40.0%
GTTTCAATATTCGCGAAACG+GGG + tig0038499:21023-21042 Msa1457170:CDS 40.0%
TTATCTGGTGCTCATACAGT+TGG + tig0038499:21071-21090 Msa1457170:CDS 40.0%
!! AATTCTTCTGGTTCTGGTTC+AGG + tig0038499:21134-21153 Msa1457170:CDS 40.0%
GAAGGGTTAAAGAAAGCTTG+TGG + tig0038499:21176-21195 Msa1457170:CDS 40.0%
!!! GGGGTTTTGAAATCAGATCA+TGG + tig0038499:21296-21315 Msa1457170:CDS 40.0%
! TCCTTCAACTAAGCCTTTTG+TGG + tig0038499:21331-21350 Msa1457170:CDS 40.0%
TCCACAAAAGGCTTAGTTGA+AGG - tig0038499:21335-21354 None:intergenic 40.0%
GAATGTTCAAACTGGTAGGA+AGG + tig0038499:21424-21443 Msa1457170:CDS 40.0%
!!! GTTTTGATTCGGAGAGGTTA+AGG - tig0038499:20557-20576 None:intergenic 40.0%
!!! AGGTTAGTTTTGATTCGGAG+AGG - tig0038499:20563-20582 None:intergenic 40.0%
! TGGAGATTGGATCTGTTTTG+AGG - tig0038499:20643-20662 None:intergenic 40.0%
!! ACGTTCAGCTTTGTTGAAAG+GGG - tig0038499:20751-20770 None:intergenic 40.0%
!! CACGTTCAGCTTTGTTGAAA+GGG - tig0038499:20752-20771 None:intergenic 40.0%
!! TCACGTTCAGCTTTGTTGAA+AGG - tig0038499:20753-20772 None:intergenic 40.0%
CGTGATCTTCTTATCATGCT+TGG + tig0038499:20894-20913 Msa1457170:CDS 40.0%
GATCTTCTTATCATGCTTGG+TGG + tig0038499:20897-20916 Msa1457170:CDS 40.0%
CCGAGGTAAACATTGTAATG+AGG - tig0038499:20924-20943 None:intergenic 40.0%
GTTTCAATATTCGCGAAACG+GGG + tig0038499:21023-21042 Msa1457170:CDS 40.0%
TTATCTGGTGCTCATACAGT+TGG + tig0038499:21071-21090 Msa1457170:CDS 40.0%
!! AATTCTTCTGGTTCTGGTTC+AGG + tig0038499:21134-21153 Msa1457170:CDS 40.0%
GAAGGGTTAAAGAAAGCTTG+TGG + tig0038499:21176-21195 Msa1457170:CDS 40.0%
!!! GGGGTTTTGAAATCAGATCA+TGG + tig0038499:21296-21315 Msa1457170:CDS 40.0%
! TCCTTCAACTAAGCCTTTTG+TGG + tig0038499:21331-21350 Msa1457170:CDS 40.0%
TCCACAAAAGGCTTAGTTGA+AGG - tig0038499:21335-21354 None:intergenic 40.0%
GAATGTTCAAACTGGTAGGA+AGG + tig0038499:21424-21443 Msa1457170:CDS 40.0%
TGTTGAAAGGGGTTGAAGAG+AGG - tig0038499:20740-20759 None:intergenic 45.0%
GATACGTACGATGAGGTCAA+AGG - tig0038499:20808-20827 None:intergenic 45.0%
!! CGGTTTTGATACGTACGATG+AGG - tig0038499:20815-20834 None:intergenic 45.0%
TCAGAGCAAGAGACAGTGTT+GGG - tig0038499:20855-20874 None:intergenic 45.0%
! CTTTGGAAGAAAGCCGTCAA+CGG - tig0038499:20979-20998 None:intergenic 45.0%
GTCATTGTCATTGACGGCTT+TGG - tig0038499:20996-21015 None:intergenic 45.0%
TGTTGAAAGGGGTTGAAGAG+AGG - tig0038499:20740-20759 None:intergenic 45.0%
GATACGTACGATGAGGTCAA+AGG - tig0038499:20808-20827 None:intergenic 45.0%
!! CGGTTTTGATACGTACGATG+AGG - tig0038499:20815-20834 None:intergenic 45.0%
TCAGAGCAAGAGACAGTGTT+GGG - tig0038499:20855-20874 None:intergenic 45.0%
! CTTTGGAAGAAAGCCGTCAA+CGG - tig0038499:20979-20998 None:intergenic 45.0%
GTCATTGTCATTGACGGCTT+TGG - tig0038499:20996-21015 None:intergenic 45.0%
TGAAAGGGGTTGAAGAGAGG+AGG - tig0038499:20737-20756 None:intergenic 50.0%
GACATCAACCTCTCTCTTCC+AGG + tig0038499:20777-20796 Msa1457170:CDS 50.0%
ATGAGGTCAAAGGAGTCTCC+TGG - tig0038499:20798-20817 None:intergenic 50.0%
GTCAGAGCAAGAGACAGTGT+TGG - tig0038499:20856-20875 None:intergenic 50.0%
GATCACGTGTAGCTGTAGCA+AGG - tig0038499:20881-20900 None:intergenic 50.0%
TCTGTGTCATCTGCCGTTGA+CGG + tig0038499:20963-20982 Msa1457170:CDS 50.0%
TGAAAGGGGTTGAAGAGAGG+AGG - tig0038499:20737-20756 None:intergenic 50.0%
GACATCAACCTCTCTCTTCC+AGG + tig0038499:20777-20796 Msa1457170:CDS 50.0%
ATGAGGTCAAAGGAGTCTCC+TGG - tig0038499:20798-20817 None:intergenic 50.0%
GTCAGAGCAAGAGACAGTGT+TGG - tig0038499:20856-20875 None:intergenic 50.0%
GATCACGTGTAGCTGTAGCA+AGG - tig0038499:20881-20900 None:intergenic 50.0%
TCTGTGTCATCTGCCGTTGA+CGG + tig0038499:20963-20982 Msa1457170:CDS 50.0%
GGCAATCGTGGAGGAAGAGA+CGG - tig0038499:20686-20705 None:intergenic 55.0%
CACGATTGCCTCCTCCCTAA+CGG + tig0038499:20696-20715 Msa1457170:CDS 55.0%
GGTTGAAGAGAGGAGGACAG+AGG - tig0038499:20730-20749 None:intergenic 55.0%
AGGAGTCTCCTGGAAGAGAG+AGG - tig0038499:20788-20807 None:intergenic 55.0%
GGGACAGGAGAGTTCAAGAG+CGG - tig0038499:20835-20854 None:intergenic 55.0%
! GCAAGAGACAGTGTTGGGAC+AGG - tig0038499:20850-20869 None:intergenic 55.0%
CGGCAGATGACACAGAACCT+CGG - tig0038499:20959-20978 None:intergenic 55.0%
GGCAATCGTGGAGGAAGAGA+CGG - tig0038499:20686-20705 None:intergenic 55.0%
CACGATTGCCTCCTCCCTAA+CGG + tig0038499:20696-20715 Msa1457170:CDS 55.0%
GGTTGAAGAGAGGAGGACAG+AGG - tig0038499:20730-20749 None:intergenic 55.0%
AGGAGTCTCCTGGAAGAGAG+AGG - tig0038499:20788-20807 None:intergenic 55.0%
GGGACAGGAGAGTTCAAGAG+CGG - tig0038499:20835-20854 None:intergenic 55.0%
! GCAAGAGACAGTGTTGGGAC+AGG - tig0038499:20850-20869 None:intergenic 55.0%
CGGCAGATGACACAGAACCT+CGG - tig0038499:20959-20978 None:intergenic 55.0%
GAGGAAGAGACGGAGAGTGG+CGG - tig0038499:20676-20695 None:intergenic 60.0%
GTGGAGGAAGAGACGGAGAG+TGG - tig0038499:20679-20698 None:intergenic 60.0%
TAGGGAGGAGGCAATCGTGG+AGG - tig0038499:20695-20714 None:intergenic 60.0%
CGTTAGGGAGGAGGCAATCG+TGG - tig0038499:20698-20717 None:intergenic 60.0%
GTTTACCTCGGCCGTCGTGA+CGG + tig0038499:20933-20952 Msa1457170:CDS 60.0%
GAGGAAGAGACGGAGAGTGG+CGG - tig0038499:20676-20695 None:intergenic 60.0%
GTGGAGGAAGAGACGGAGAG+TGG - tig0038499:20679-20698 None:intergenic 60.0%
TAGGGAGGAGGCAATCGTGG+AGG - tig0038499:20695-20714 None:intergenic 60.0%
CGTTAGGGAGGAGGCAATCG+TGG - tig0038499:20698-20717 None:intergenic 60.0%
GTTTACCTCGGCCGTCGTGA+CGG + tig0038499:20933-20952 Msa1457170:CDS 60.0%
GAAGAGACGGAGAGTGGCGG+CGG - tig0038499:20673-20692 None:intergenic 65.0%
!! CAGAGGCGTCGCAGCCGTTA+GGG - tig0038499:20713-20732 None:intergenic 65.0%
!! ACAGAGGCGTCGCAGCCGTT+AGG - tig0038499:20714-20733 None:intergenic 65.0%
CAGAACCTCGGCCGTCACGA+CGG - tig0038499:20947-20966 None:intergenic 65.0%
GAAGAGACGGAGAGTGGCGG+CGG - tig0038499:20673-20692 None:intergenic 65.0%
!! CAGAGGCGTCGCAGCCGTTA+GGG - tig0038499:20713-20732 None:intergenic 65.0%
!! ACAGAGGCGTCGCAGCCGTT+AGG - tig0038499:20714-20733 None:intergenic 65.0%
CAGAACCTCGGCCGTCACGA+CGG - tig0038499:20947-20966 None:intergenic 65.0%
CGGCGGCGGTGGTTGGAGAT+TGG - tig0038499:20656-20675 None:intergenic 70.0%
CGTCGCAGCCGTTAGGGAGG+AGG - tig0038499:20707-20726 None:intergenic 70.0%
! AGGCGTCGCAGCCGTTAGGG+AGG - tig0038499:20710-20729 None:intergenic 70.0%
CGGCGGCGGTGGTTGGAGAT+TGG - tig0038499:20656-20675 None:intergenic 70.0%
CGTCGCAGCCGTTAGGGAGG+AGG - tig0038499:20707-20726 None:intergenic 70.0%
! AGGCGTCGCAGCCGTTAGGG+AGG - tig0038499:20710-20729 None:intergenic 70.0%
AGAGTGGCGGCGGCGGTGGT+TGG - tig0038499:20663-20682 None:intergenic 75.0%
GAGACGGAGAGTGGCGGCGG+CGG - tig0038499:20670-20689 None:intergenic 75.0%
AGAGTGGCGGCGGCGGTGGT+TGG - tig0038499:20663-20682 None:intergenic 75.0%
GAGACGGAGAGTGGCGGCGG+CGG - tig0038499:20670-20689 None:intergenic 75.0%
! ACGGAGAGTGGCGGCGGCGG+TGG - tig0038499:20667-20686 None:intergenic 80.0%
! CTCGGCCGTCACGACGGCCG+AGG - tig0038499:20941-20960 None:intergenic 80.0%
! CTCGGCCGTCGTGACGGCCG+AGG + tig0038499:20939-20958 Msa1457170:CDS 80.0%
! ACGGAGAGTGGCGGCGGCGG+TGG - tig0038499:20667-20686 None:intergenic 80.0%
! CTCGGCCGTCACGACGGCCG+AGG - tig0038499:20941-20960 None:intergenic 80.0%
! CTCGGCCGTCGTGACGGCCG+AGG + tig0038499:20939-20958 Msa1457170:CDS 80.0%
Chromosome Type Strat End Strand Name
tig0038499 gene 20489 21481 20489 ID=Msa1457170;Name=Msa1457170
tig0038499 mRNA 20489 21481 20489 ID=Msa1457170-mRNA-1;Parent=Msa1457170;Name=Msa1457170-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|-1|0|1|-1|1|1|0|330
tig0038499 exon 20489 21481 20489 ID=Msa1457170-mRNA-1:exon:21014;Parent=Msa1457170-mRNA-1
tig0038499 CDS 20489 21481 20489 ID=Msa1457170-mRNA-1:cds;Parent=Msa1457170-mRNA-1
Gene Sequence

>Msa1457170

ATGGCAGCAATAAAAACAACAACGTTGTTATCATTGTTCTTCTTCTTCTTCAACATCATCATTAACCTTAACCTCTCCGAATCAAAACTAACCTTAGATTACTACAAACAAACATGTCCACAATTCGAACAAATCATTCAACAAACAGTTACCTCAAAACAGATCCAATCTCCAACCACCGCCGCCGCCACTCTCCGTCTCTTCCTCCACGATTGCCTCCTCCCTAACGGCTGCGACGCCTCTGTCCTCCTCTCTTCAACCCCTTTCAACAAAGCTGAACGTGACAACGACATCAACCTCTCTCTTCCAGGAGACTCCTTTGACCTCATCGTACGTATCAAAACCGCTCTTGAACTCTCCTGTCCCAACACTGTCTCTTGCTCTGACATCCTTGCTACAGCTACACGTGATCTTCTTATCATGCTTGGTGGTCCTCATTACAATGTTTACCTCGGCCGTCGTGACGGCCGAGGTTCTGTGTCATCTGCCGTTGACGGCTTTCTTCCAAAGCCGTCAATGACAATGACACAGATAGTTTCAATATTCGCGAAACGGGGTTTTACAGTTGAAGAAATGGTTGCTTTATCTGGTGCTCATACAGTTGGACTTTCACATTGTAGTGAAATTAGTGGAGATATTTACAACAATTCTTCTGGTTCTGGTTCAGGTTATAATCCAAGATTTGTTGAAGGGTTAAAGAAAGCTTGTGGTGATTATAAGAAGAATCCTACTTTGTCTGTTTTTAATGATATTATGACACCAAATAAGTTTGATAATGTTTATTTTCAGAATTTACCTAAAGGTTTAGGGGTTTTGAAATCAGATCATGGATTGTTTAGTGATCCTTCAACTAAGCCTTTTGTGGAAAGATTTGCTAAGGATCAAGATTATTTCTTTAAGGTTTTTGCTAGTTCAATGCAAAAGCTTAGTCTTTTGAATGTTCAAACTGGTAGGAAGGGTGAGATTAGAAGAAGATGTGATCAGGTTAATTGA
Protein sequence

>Msa1457170

MAAIKTTTLLSLFFFFFNIIINLNLSESKLTLDYYKQTCPQFEQIIQQTVTSKQIQSPTTAAATLRLFLHDCLLPNGCDASVLLSSTPFNKAERDNDINLSLPGDSFDLIVRIKTALELSCPNTVSCSDILATATRDLLIMLGGPHYNVYLGRRDGRGSVSSAVDGFLPKPSMTMTQIVSIFAKRGFTVEEMVALSGAHTVGLSHCSEISGDIYNNSSGSGSGYNPRFVEGLKKACGDYKKNPTLSVFNDIMTPNKFDNVYFQNLPKGLGVLKSDHGLFSDPSTKPFVERFAKDQDYFFKVFASSMQKLSLLNVQTGRKGEIRRRCDQVN*