Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1461080 | XP_013468554.1 | 100.000 | 81 | 0 | 0 | 1 | 81 | 1 | 81 | 6.32e-49 | 166 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1461080 | sp|O49472|INDH_ARATH | 76.119 | 67 | 16 | 0 | 15 | 81 | 36 | 102 | 2.45e-29 | 108 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1461080 | A0A072VLT3 | 100.000 | 81 | 0 | 0 | 1 | 81 | 1 | 81 | 3.02e-49 | 166 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0070620 | Msa1461080 | 0.808496 | 3.010358e-50 | -8.615850e-47 |
| Msa1332040 | Msa1461080 | 0.807474 | 4.965591e-50 | -8.615850e-47 |
| Msa0867520 | Msa1461080 | 0.800084 | 1.701344e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1461080 | MtrunA17_Chr1g0184451 | 100.000 | 81 | 0 | 0 | 1 | 81 | 1 | 81 | 5.82e-53 | 166 |
| Msa1461080 | MtrunA17_Chr6g0485031 | 50.000 | 56 | 27 | 1 | 21 | 76 | 176 | 230 | 9.30e-12 | 58.9 |
| Msa1461080 | MtrunA17_Chr1g0153571 | 51.724 | 58 | 27 | 1 | 17 | 74 | 54 | 110 | 1.27e-11 | 58.2 |
| Msa1461080 | MtrunA17_Chr1g0151421 | 51.724 | 58 | 27 | 1 | 17 | 74 | 55 | 111 | 1.27e-11 | 58.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1461080 | AT4G19540.1 | 76.119 | 67 | 16 | 0 | 15 | 81 | 36 | 102 | 2.49e-30 | 108 |
| Msa1461080 | AT3G24430.1 | 53.571 | 56 | 25 | 1 | 21 | 76 | 175 | 229 | 1.05e-12 | 62.0 |
Find 30 sgRNAs with CRISPR-Local
Find 132 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTGATTCAACACATAGAT+TGG | 0.347912 | tig0041264:+1955 | None:intergenic |
| GATACCATAGCTATTGCTTC+TGG | 0.358686 | tig0041264:-1654 | Msa1461080:CDS |
| GCGAAGCATCTTCGCATTGA+TGG | 0.362197 | tig0041264:-1684 | Msa1461080:CDS |
| GTGTCGATGTTCATCATGAT+AGG | 0.396838 | tig0041264:+538 | None:intergenic |
| GATATACCTTGAGTGACTTC+AGG | 0.399695 | tig0041264:+511 | None:intergenic |
| GTAAGTTCCAATTGAAGGTT+GGG | 0.411148 | tig0041264:-594 | Msa1461080:CDS |
| TGCAAGTAAGTTCCAATTGA+AGG | 0.420623 | tig0041264:-599 | Msa1461080:CDS |
| CAAGTAACCCAACCTTCAAT+TGG | 0.422756 | tig0041264:+587 | None:intergenic |
| GTTCATCATGATAGGAATGT+TGG | 0.432777 | tig0041264:+546 | None:intergenic |
| GATCTTCTGTATGTGATGTC+GGG | 0.446456 | tig0041264:+1870 | None:intergenic |
| ATTGATTCAACACATAGATT+GGG | 0.450290 | tig0041264:+1956 | None:intergenic |
| TTACTTGATGCTGATGTGTA+TGG | 0.464843 | tig0041264:-571 | Msa1461080:CDS |
| ATAGCTATTGCTTCTGGTAA+AGG | 0.466248 | tig0041264:-1648 | Msa1461080:CDS |
| TTCATCATGATAGGAATGTT+GGG | 0.479590 | tig0041264:+547 | None:intergenic |
| GCACTTTGTTTAGTTTGAGT+TGG | 0.486889 | tig0041264:+2026 | None:intergenic |
| GGATCTTCTGTATGTGATGT+CGG | 0.492796 | tig0041264:+1869 | None:intergenic |
| AGTAAGTTCCAATTGAAGGT+TGG | 0.499750 | tig0041264:-595 | Msa1461080:CDS |
| CATCAAAGTTGATGAGGCCG+AGG | 0.513994 | tig0041264:-1830 | Msa1461080:exon |
| ATCTTCTGTATGTGATGTCG+GGG | 0.543008 | tig0041264:+1871 | None:intergenic |
| GTCGGCAAATCAACAACTGC+TGG | 0.546887 | tig0041264:-1621 | Msa1461080:intron |
| TACAATTACATTCAACAGCA+AGG | 0.547823 | tig0041264:+1980 | None:intergenic |
| TTTCATTCTGATCAGTGGCT+AGG | 0.565317 | tig0041264:-1723 | Msa1461080:intron |
| GCTTCTGGTAAAGGCGGTGT+CGG | 0.565622 | tig0041264:-1639 | Msa1461080:CDS |
| TTACATTCAACAGCAAGGAA+TGG | 0.615847 | tig0041264:+1985 | None:intergenic |
| TTTACCAGAAGCAATAGCTA+TGG | 0.617990 | tig0041264:+1650 | None:intergenic |
| CATTCACATCAAAGTTGATG+AGG | 0.635095 | tig0041264:-1836 | Msa1461080:exon |
| ATCAAAGTTGATGAGGCCGA+GGG | 0.661654 | tig0041264:-1829 | Msa1461080:intron |
| GCTATTGCTTCTGGTAAAGG+CGG | 0.674617 | tig0041264:-1645 | Msa1461080:CDS |
| ACAAAGCCTGAAGTCACTCA+AGG | 0.675264 | tig0041264:-517 | None:intergenic |
| TCTTCTGTATGTGATGTCGG+GGG | 0.721310 | tig0041264:+1872 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTAAATTAAGATTGC+AGG | - | tig0041264:1388-1407 | Msa1461080:intron | 15.0% |
| !!! | TTTTTTAAATTAAGATTGCA+GGG | - | tig0041264:1389-1408 | Msa1461080:intron | 15.0% |
| !!! | TTTTTTTAAATTAAGATTGC+AGG | - | tig0041264:1388-1407 | Msa1461080:intron | 15.0% |
| !!! | TTTTTTAAATTAAGATTGCA+GGG | - | tig0041264:1389-1408 | Msa1461080:intron | 15.0% |
| !!! | CAAATTAGAAACAATTTTAG+AGG | + | tig0041264:1122-1141 | None:intergenic | 20.0% |
| !!! | ATTGTTTCTAATTTGAAGTT+AGG | - | tig0041264:1127-1146 | Msa1461080:intron | 20.0% |
| !!! | TTTTTAAATTAAGATTGCAG+GGG | - | tig0041264:1390-1409 | Msa1461080:intron | 20.0% |
| !!! | CAAATTAGAAACAATTTTAG+AGG | + | tig0041264:1122-1141 | None:intergenic | 20.0% |
| !!! | ATTGTTTCTAATTTGAAGTT+AGG | - | tig0041264:1127-1146 | Msa1461080:intron | 20.0% |
| !!! | TTTTTAAATTAAGATTGCAG+GGG | - | tig0041264:1390-1409 | Msa1461080:intron | 20.0% |
| !! | ATTGATTCAACACATAGATT+GGG | + | tig0041264:601-620 | None:intergenic | 25.0% |
| !! | AATTGATTCAACACATAGAT+TGG | + | tig0041264:602-621 | None:intergenic | 25.0% |
| !!! | TTTTGATTAGGTTGAATTTG+AGG | + | tig0041264:644-663 | None:intergenic | 25.0% |
| ! | GATATAAGCATATGTTTGAT+AGG | - | tig0041264:1066-1085 | Msa1461080:intron | 25.0% |
| ! | GTAGTGTTTGATAAAATTAG+CGG | - | tig0041264:1309-1328 | Msa1461080:intron | 25.0% |
| ! | GGGTTGAACAATAAATTTAA+GGG | + | tig0041264:1589-1608 | None:intergenic | 25.0% |
| !! | TGGGTTGAACAATAAATTTA+AGG | + | tig0041264:1590-1609 | None:intergenic | 25.0% |
| ! | TTATTTCCATAAGTTCTTCA+GGG | + | tig0041264:1754-1773 | None:intergenic | 25.0% |
| !! | ATTGTTTTCATAAGTTCTCT+CGG | - | tig0041264:1791-1810 | Msa1461080:intron | 25.0% |
| !! | ATTGATTCAACACATAGATT+GGG | + | tig0041264:601-620 | None:intergenic | 25.0% |
| !! | AATTGATTCAACACATAGAT+TGG | + | tig0041264:602-621 | None:intergenic | 25.0% |
| !!! | TTTTGATTAGGTTGAATTTG+AGG | + | tig0041264:644-663 | None:intergenic | 25.0% |
| ! | GATATAAGCATATGTTTGAT+AGG | - | tig0041264:1066-1085 | Msa1461080:intron | 25.0% |
| ! | GTAGTGTTTGATAAAATTAG+CGG | - | tig0041264:1309-1328 | Msa1461080:intron | 25.0% |
| ! | GGGTTGAACAATAAATTTAA+GGG | + | tig0041264:1589-1608 | None:intergenic | 25.0% |
| !! | TGGGTTGAACAATAAATTTA+AGG | + | tig0041264:1590-1609 | None:intergenic | 25.0% |
| ! | TTATTTCCATAAGTTCTTCA+GGG | + | tig0041264:1754-1773 | None:intergenic | 25.0% |
| !! | ATTGTTTTCATAAGTTCTCT+CGG | - | tig0041264:1791-1810 | Msa1461080:intron | 25.0% |
| TACAATTACATTCAACAGCA+AGG | + | tig0041264:577-596 | None:intergenic | 30.0% | |
| !!! | GTGGATTTGAGATTTTGATT+AGG | + | tig0041264:656-675 | None:intergenic | 30.0% |
| ! | TTGATGTGAATGTTTTCTCA+GGG | + | tig0041264:710-729 | None:intergenic | 30.0% |
| ! | TTTGATGTGAATGTTTTCTC+AGG | + | tig0041264:711-730 | None:intergenic | 30.0% |
| AAGCATATGTTTGATAGGTT+TGG | - | tig0041264:1071-1090 | Msa1461080:intron | 30.0% | |
| ! | ATATGTTTGATAGGTTTGGT+TGG | - | tig0041264:1075-1094 | Msa1461080:intron | 30.0% |
| ! | CTTTGTTTGCTAAAGAATAG+CGG | - | tig0041264:1191-1210 | Msa1461080:intron | 30.0% |
| GAAAATGACAATTACCAAAC+AGG | - | tig0041264:1496-1515 | Msa1461080:intron | 30.0% | |
| AAGACACATATTTGAGCTTA+TGG | + | tig0041264:1556-1575 | None:intergenic | 30.0% | |
| AAATATGTGTCTTACCAAAC+AGG | - | tig0041264:1563-1582 | Msa1461080:intron | 30.0% | |
| AATAAATTTAAGGGCCTGTT+TGG | + | tig0041264:1580-1599 | None:intergenic | 30.0% | |
| GGATACATTTACACAAAAGT+GGG | + | tig0041264:1609-1628 | None:intergenic | 30.0% | |
| AATGTAAAGTGGTTTCTGTT+CGG | + | tig0041264:1630-1649 | None:intergenic | 30.0% | |
| AAAGTGAGAAGAATGTAAAG+TGG | + | tig0041264:1641-1660 | None:intergenic | 30.0% | |
| CTTATTTCCATAAGTTCTTC+AGG | + | tig0041264:1755-1774 | None:intergenic | 30.0% | |
| ! | TCAACTAATAAGAGCTTGTT+TGG | + | tig0041264:1872-1891 | None:intergenic | 30.0% |
| TTCATCATGATAGGAATGTT+GGG | + | tig0041264:2010-2029 | None:intergenic | 30.0% | |
| TACAATTACATTCAACAGCA+AGG | + | tig0041264:577-596 | None:intergenic | 30.0% | |
| !!! | GTGGATTTGAGATTTTGATT+AGG | + | tig0041264:656-675 | None:intergenic | 30.0% |
| ! | TTGATGTGAATGTTTTCTCA+GGG | + | tig0041264:710-729 | None:intergenic | 30.0% |
| ! | TTTGATGTGAATGTTTTCTC+AGG | + | tig0041264:711-730 | None:intergenic | 30.0% |
| AAGCATATGTTTGATAGGTT+TGG | - | tig0041264:1071-1090 | Msa1461080:intron | 30.0% | |
| ! | ATATGTTTGATAGGTTTGGT+TGG | - | tig0041264:1075-1094 | Msa1461080:intron | 30.0% |
| ! | CTTTGTTTGCTAAAGAATAG+CGG | - | tig0041264:1191-1210 | Msa1461080:intron | 30.0% |
| GAAAATGACAATTACCAAAC+AGG | - | tig0041264:1496-1515 | Msa1461080:intron | 30.0% | |
| AAGACACATATTTGAGCTTA+TGG | + | tig0041264:1556-1575 | None:intergenic | 30.0% | |
| AAATATGTGTCTTACCAAAC+AGG | - | tig0041264:1563-1582 | Msa1461080:intron | 30.0% | |
| AATAAATTTAAGGGCCTGTT+TGG | + | tig0041264:1580-1599 | None:intergenic | 30.0% | |
| GGATACATTTACACAAAAGT+GGG | + | tig0041264:1609-1628 | None:intergenic | 30.0% | |
| AATGTAAAGTGGTTTCTGTT+CGG | + | tig0041264:1630-1649 | None:intergenic | 30.0% | |
| AAAGTGAGAAGAATGTAAAG+TGG | + | tig0041264:1641-1660 | None:intergenic | 30.0% | |
| CTTATTTCCATAAGTTCTTC+AGG | + | tig0041264:1755-1774 | None:intergenic | 30.0% | |
| ! | TCAACTAATAAGAGCTTGTT+TGG | + | tig0041264:1872-1891 | None:intergenic | 30.0% |
| TTCATCATGATAGGAATGTT+GGG | + | tig0041264:2010-2029 | None:intergenic | 30.0% | |
| !! | GCACTTTGTTTAGTTTGAGT+TGG | + | tig0041264:531-550 | None:intergenic | 35.0% |
| TTACATTCAACAGCAAGGAA+TGG | + | tig0041264:572-591 | None:intergenic | 35.0% | |
| ! | TGATGTGAATGTTTTCTCAG+GGG | + | tig0041264:709-728 | None:intergenic | 35.0% |
| !! | CATTCACATCAAAGTTGATG+AGG | - | tig0041264:718-737 | Msa1461080:intron | 35.0% |
| TATCGTTTCATTCTGATCAG+TGG | - | tig0041264:826-845 | Msa1461080:intron | 35.0% | |
| TTTACCAGAAGCAATAGCTA+TGG | + | tig0041264:907-926 | None:intergenic | 35.0% | |
| ATAGCTATTGCTTCTGGTAA+AGG | - | tig0041264:906-925 | Msa1461080:intron | 35.0% | |
| GCTATAAGCTGCAAATTGAA+GGG | + | tig0041264:967-986 | None:intergenic | 35.0% | |
| TGCTATAAGCTGCAAATTGA+AGG | + | tig0041264:968-987 | None:intergenic | 35.0% | |
| !!! | TGGTTGGTTTTGAGTTGAAT+TGG | - | tig0041264:1091-1110 | Msa1461080:intron | 35.0% |
| ATGACTGAAAAAGACCTGTT+TGG | + | tig0041264:1513-1532 | None:intergenic | 35.0% | |
| CGGATACATTTACACAAAAG+TGG | + | tig0041264:1610-1629 | None:intergenic | 35.0% | |
| TGCAAGTAAGTTCCAATTGA+AGG | - | tig0041264:1955-1974 | Msa1461080:five_prime_UTR | 35.0% | |
| AGTAAGTTCCAATTGAAGGT+TGG | - | tig0041264:1959-1978 | Msa1461080:five_prime_UTR | 35.0% | |
| GTAAGTTCCAATTGAAGGTT+GGG | - | tig0041264:1960-1979 | Msa1461080:five_prime_UTR | 35.0% | |
| TTACTTGATGCTGATGTGTA+TGG | - | tig0041264:1983-2002 | Msa1461080:five_prime_UTR | 35.0% | |
| GTTCATCATGATAGGAATGT+TGG | + | tig0041264:2011-2030 | None:intergenic | 35.0% | |
| !! | GCACTTTGTTTAGTTTGAGT+TGG | + | tig0041264:531-550 | None:intergenic | 35.0% |
| TTACATTCAACAGCAAGGAA+TGG | + | tig0041264:572-591 | None:intergenic | 35.0% | |
| ! | TGATGTGAATGTTTTCTCAG+GGG | + | tig0041264:709-728 | None:intergenic | 35.0% |
| !! | CATTCACATCAAAGTTGATG+AGG | - | tig0041264:718-737 | Msa1461080:intron | 35.0% |
| TATCGTTTCATTCTGATCAG+TGG | - | tig0041264:826-845 | Msa1461080:intron | 35.0% | |
| TTTACCAGAAGCAATAGCTA+TGG | + | tig0041264:907-926 | None:intergenic | 35.0% | |
| ATAGCTATTGCTTCTGGTAA+AGG | - | tig0041264:906-925 | Msa1461080:intron | 35.0% | |
| GCTATAAGCTGCAAATTGAA+GGG | + | tig0041264:967-986 | None:intergenic | 35.0% | |
| TGCTATAAGCTGCAAATTGA+AGG | + | tig0041264:968-987 | None:intergenic | 35.0% | |
| !!! | TGGTTGGTTTTGAGTTGAAT+TGG | - | tig0041264:1091-1110 | Msa1461080:intron | 35.0% |
| ATGACTGAAAAAGACCTGTT+TGG | + | tig0041264:1513-1532 | None:intergenic | 35.0% | |
| CGGATACATTTACACAAAAG+TGG | + | tig0041264:1610-1629 | None:intergenic | 35.0% | |
| TGCAAGTAAGTTCCAATTGA+AGG | - | tig0041264:1955-1974 | Msa1461080:five_prime_UTR | 35.0% | |
| AGTAAGTTCCAATTGAAGGT+TGG | - | tig0041264:1959-1978 | Msa1461080:five_prime_UTR | 35.0% | |
| GTAAGTTCCAATTGAAGGTT+GGG | - | tig0041264:1960-1979 | Msa1461080:five_prime_UTR | 35.0% | |
| TTACTTGATGCTGATGTGTA+TGG | - | tig0041264:1983-2002 | Msa1461080:five_prime_UTR | 35.0% | |
| GTTCATCATGATAGGAATGT+TGG | + | tig0041264:2011-2030 | None:intergenic | 35.0% | |
| ATCTTCTGTATGTGATGTCG+GGG | + | tig0041264:686-705 | None:intergenic | 40.0% | |
| GATCTTCTGTATGTGATGTC+GGG | + | tig0041264:687-706 | None:intergenic | 40.0% | |
| GGATCTTCTGTATGTGATGT+CGG | + | tig0041264:688-707 | None:intergenic | 40.0% | |
| TTTCATTCTGATCAGTGGCT+AGG | - | tig0041264:831-850 | Msa1461080:intron | 40.0% | |
| GATACCATAGCTATTGCTTC+TGG | - | tig0041264:900-919 | Msa1461080:intron | 40.0% | |
| ! | ACTGATAAGCTAGCTTGTAG+CGG | - | tig0041264:1217-1236 | Msa1461080:intron | 40.0% |
| AAGCTACCCTGAAGAACTTA+TGG | - | tig0041264:1745-1764 | Msa1461080:intron | 40.0% | |
| CAAGTAACCCAACCTTCAAT+TGG | + | tig0041264:1970-1989 | None:intergenic | 40.0% | |
| ! | GTGTCGATGTTCATCATGAT+AGG | + | tig0041264:2019-2038 | None:intergenic | 40.0% |
| ATCTTCTGTATGTGATGTCG+GGG | + | tig0041264:686-705 | None:intergenic | 40.0% | |
| GATCTTCTGTATGTGATGTC+GGG | + | tig0041264:687-706 | None:intergenic | 40.0% | |
| GGATCTTCTGTATGTGATGT+CGG | + | tig0041264:688-707 | None:intergenic | 40.0% | |
| TTTCATTCTGATCAGTGGCT+AGG | - | tig0041264:831-850 | Msa1461080:intron | 40.0% | |
| GATACCATAGCTATTGCTTC+TGG | - | tig0041264:900-919 | Msa1461080:intron | 40.0% | |
| ! | ACTGATAAGCTAGCTTGTAG+CGG | - | tig0041264:1217-1236 | Msa1461080:intron | 40.0% |
| AAGCTACCCTGAAGAACTTA+TGG | - | tig0041264:1745-1764 | Msa1461080:intron | 40.0% | |
| CAAGTAACCCAACCTTCAAT+TGG | + | tig0041264:1970-1989 | None:intergenic | 40.0% | |
| ! | GTGTCGATGTTCATCATGAT+AGG | + | tig0041264:2019-2038 | None:intergenic | 40.0% |
| TCTTCTGTATGTGATGTCGG+GGG | + | tig0041264:685-704 | None:intergenic | 45.0% | |
| !! | ATCAAAGTTGATGAGGCCGA+GGG | - | tig0041264:725-744 | Msa1461080:intron | 45.0% |
| AAATGTCTCAGTCTCACCCT+CGG | + | tig0041264:744-763 | None:intergenic | 45.0% | |
| GCTATTGCTTCTGGTAAAGG+CGG | - | tig0041264:909-928 | Msa1461080:intron | 45.0% | |
| TCTTCTGTATGTGATGTCGG+GGG | + | tig0041264:685-704 | None:intergenic | 45.0% | |
| !! | ATCAAAGTTGATGAGGCCGA+GGG | - | tig0041264:725-744 | Msa1461080:intron | 45.0% |
| AAATGTCTCAGTCTCACCCT+CGG | + | tig0041264:744-763 | None:intergenic | 45.0% | |
| GCTATTGCTTCTGGTAAAGG+CGG | - | tig0041264:909-928 | Msa1461080:intron | 45.0% | |
| !! | CATCAAAGTTGATGAGGCCG+AGG | - | tig0041264:724-743 | Msa1461080:intron | 50.0% |
| ! | GCGAAGCATCTTCGCATTGA+TGG | - | tig0041264:870-889 | Msa1461080:intron | 50.0% |
| GTCGGCAAATCAACAACTGC+TGG | - | tig0041264:933-952 | Msa1461080:intron | 50.0% | |
| !! | CATCAAAGTTGATGAGGCCG+AGG | - | tig0041264:724-743 | Msa1461080:intron | 50.0% |
| ! | GCGAAGCATCTTCGCATTGA+TGG | - | tig0041264:870-889 | Msa1461080:intron | 50.0% |
| GTCGGCAAATCAACAACTGC+TGG | - | tig0041264:933-952 | Msa1461080:intron | 50.0% | |
| GTGATGTCGGGGGAAAATCG+TGG | + | tig0041264:675-694 | None:intergenic | 55.0% | |
| GCTTCTGGTAAAGGCGGTGT+CGG | - | tig0041264:915-934 | Msa1461080:intron | 55.0% | |
| GTGATGTCGGGGGAAAATCG+TGG | + | tig0041264:675-694 | None:intergenic | 55.0% | |
| GCTTCTGGTAAAGGCGGTGT+CGG | - | tig0041264:915-934 | Msa1461080:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0041264 | gene | 519 | 2057 | 519 | ID=Msa1461080;Name=Msa1461080 |
| tig0041264 | mRNA | 519 | 2057 | 519 | ID=Msa1461080-mRNA-1;Parent=Msa1461080;Name=Msa1461080-mRNA-1;_AED=0.00;_eAED=0.00;_QI=216|1|0.66|1|1|1|3|0|81 |
| tig0041264 | exon | 519 | 640 | 519 | ID=Msa1461080-mRNA-1:exon:23017;Parent=Msa1461080-mRNA-1 |
| tig0041264 | exon | 1622 | 1730 | 1622 | ID=Msa1461080-mRNA-1:exon:23016;Parent=Msa1461080-mRNA-1 |
| tig0041264 | exon | 1830 | 2057 | 1830 | ID=Msa1461080-mRNA-1:exon:23015;Parent=Msa1461080-mRNA-1 |
| tig0041264 | five_prime_UTR | 1842 | 2057 | 1842 | ID=Msa1461080-mRNA-1:five_prime_utr;Parent=Msa1461080-mRNA-1 |
| tig0041264 | CDS | 1830 | 1841 | 1830 | ID=Msa1461080-mRNA-1:cds;Parent=Msa1461080-mRNA-1 |
| tig0041264 | CDS | 1622 | 1730 | 1622 | ID=Msa1461080-mRNA-1:cds;Parent=Msa1461080-mRNA-1 |
| tig0041264 | CDS | 519 | 640 | 519 | ID=Msa1461080-mRNA-1:cds;Parent=Msa1461080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
