AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0867520

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0867520 MtrunA17_Chr1g0174771 95.795 547 21 1 1 545 1 547 0.0 1056
Msa0867520 MtrunA17_Chr7g0258351 77.095 537 117 4 15 548 22 555 0.0 859
Msa0867520 MtrunA17_Chr6g0462921 66.129 62 21 0 234 295 1 62 1.92e-22 93.6
Msa0867520 MtrunA17_Chr7g0248211 67.692 65 15 2 137 196 15 78 1.43e-17 77.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0867520 AT3G57890.1 67.336 548 166 5 8 545 23 567 0.0 769
Msa0867520 AT3G57890.2 63.185 584 166 6 8 545 23 603 0.0 750
Msa0867520 AT2G42230.2 66.174 541 172 4 15 545 23 562 0.0 748
Msa0867520 AT2G42230.1 67.254 397 121 3 15 403 23 418 0.0 552

Find 182 sgRNAs with CRISPR-Local

Find 763 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGATGCTCACCTGCAATTTA+TGG 0.177659 6_1:-452531 None:intergenic
AGGACTTCTGCTAAGGAAAA+TGG 0.208783 6_1:+449266 Msa0867520:CDS
AGTGGAGGAGGGAGGGAGGG+TGG 0.230701 6_1:-446115 None:intergenic
AGGGAGGGAGGGTGGGTTTG+CGG 0.240986 6_1:-446107 None:intergenic
TTAAGATATGCCATTGTCTA+TGG 0.241107 6_1:+451192 Msa0867520:CDS
CCTTCTACTTCTGCGTTTGA+TGG 0.259375 6_1:+446569 Msa0867520:CDS
GCACATACATAAAGATAAAA+TGG 0.273943 6_1:+454686 Msa0867520:CDS
CTCTGCTCTCTCTCCTCTTC+AGG 0.274169 6_1:+446598 Msa0867520:CDS
CACTCATGTGCTCCTCCAAT+TGG 0.275744 6_1:-453889 None:intergenic
TTCTCCTTTCTTTGCAAATT+CGG 0.277718 6_1:+449151 Msa0867520:CDS
CTGCTTCTGTTGCTGATGTT+TGG 0.283989 6_1:+446546 Msa0867520:CDS
GCAAAATATATCTTCTGCTT+TGG 0.313310 6_1:+449229 Msa0867520:CDS
GGGTCGGAGAAGATGAGTTT+TGG 0.319666 6_1:-446269 None:intergenic
ACTCATGTGCTCCTCCAATT+GGG 0.320118 6_1:-453888 None:intergenic
GACTCTCCTGCGAGCCAGTT+TGG 0.320305 6_1:-454351 None:intergenic
TAGACAATGGCATATCTTAA+AGG 0.325112 6_1:-451189 None:intergenic
CAGTCATGAACTTGAGTAAC+AGG 0.328107 6_1:-449200 None:intergenic
CATAAAAGGTTCCTCTGTTA+AGG 0.328768 6_1:+449424 Msa0867520:CDS
AAGCATGCATCTGACATAAA+AGG 0.335471 6_1:+449410 Msa0867520:CDS
TCTAGCCGAGCCAGGGGAGG+AGG 0.341097 6_1:+448043 Msa0867520:CDS
ACAAAATTTGTGAACTGATC+AGG 0.347132 6_1:-454043 None:intergenic
TACTTCAAGGACTGGCTATA+TGG 0.349727 6_1:+454618 Msa0867520:CDS
AGAGAGAAAGAGAGTGAGAT+TGG 0.350243 6_1:-446152 None:intergenic
TATGAATCTGGTAATGCAAA+TGG 0.361702 6_1:-454396 None:intergenic
AGTGAACCAGCAACCTCTTA+TGG 0.370913 6_1:+452498 Msa0867520:CDS
ACGGGAACCGCGGGCATCTC+AGG 0.374675 6_1:-449176 None:intergenic
CCTAGTTCAGTTTGGCGATA+AGG 0.381659 6_1:+449103 Msa0867520:CDS
TCAGATGCTACAATAGTTCT+TGG 0.382767 6_1:+451219 Msa0867520:CDS
GTGATGTGGCTTGAAGTGGT+TGG 0.387284 6_1:-446057 None:intergenic
GAAAACGACGTCGTCGTTGA+TGG 0.388498 6_1:+446440 Msa0867520:CDS
TGAGAGTGGAGGAGGGAGGG+AGG 0.394461 6_1:-446119 None:intergenic
GGAGATGAGGTGGTTGGAGG+AGG 0.395910 6_1:-446333 None:intergenic
TGGATAGATTTGAGCACCTT+GGG 0.396913 6_1:+449078 Msa0867520:CDS
AATGGTGATGAGAGTGGAGG+AGG 0.409006 6_1:-446127 None:intergenic
CTTGGGTTCCTAGTTCAGTT+TGG 0.422155 6_1:+449095 Msa0867520:CDS
TGATGTGGCTTGAAGTGGTT+GGG 0.423306 6_1:-446056 None:intergenic
TGGTTATCACCAACCATAAG+AGG 0.423877 6_1:-452511 None:intergenic
GAACAGATGGGATGAAGCTC+TGG 0.425086 6_1:+453934 Msa0867520:CDS
GAGAGTGGAGGAGGGAGGGA+GGG 0.425093 6_1:-446118 None:intergenic
ATTACACTTCTATTTACATT+GGG 0.426307 6_1:-456818 None:intergenic
GTGGAGGAGGGAGGGAGGGT+GGG 0.436341 6_1:-446114 None:intergenic
TGATGAGAGTGGAGGAGGGA+GGG 0.436966 6_1:-446122 None:intergenic
TCTTGATCAGCGGCACTGGC+TGG 0.439061 6_1:-449290 None:intergenic
AGATTTAGTGATCCCTTCAA+TGG 0.439889 6_1:-449378 None:intergenic
GCTCGAATGGTTCGCGGCGA+GGG 0.442658 6_1:-446229 None:intergenic
CTATCTCTTCTAGCCGAGCC+AGG 0.445990 6_1:+448035 Msa0867520:CDS
AGCCGAGCCAGGGGAGGAGG+GGG 0.446711 6_1:+448046 Msa0867520:CDS
TTTGACTGCAGATTCCAAAC+TGG 0.447169 6_1:+454337 Msa0867520:intron
AGCTGAGTCTGCTACACGCC+TGG 0.447633 6_1:+454018 Msa0867520:CDS
CCTTATCGCCAAACTGAACT+AGG 0.447758 6_1:-449103 None:intergenic
CTTGAAGTGGTTGGGTTGTG+TGG 0.452634 6_1:-446048 None:intergenic
ACAATAGTTCTTGGAGCAGT+TGG 0.453677 6_1:+451228 Msa0867520:CDS
TGTGCTTCATGTGTACTTCA+AGG 0.453994 6_1:+454605 Msa0867520:CDS
GAGTGTGAGGAGGGATTGTG+TGG 0.455251 6_1:-446291 None:intergenic
GGAGGGTTTGTTTGAGTGTG+AGG 0.457758 6_1:-446304 None:intergenic
CACCAACCATAAGAGGTTGC+TGG 0.458926 6_1:-452504 None:intergenic
GGAGGAGATGAGGTGGTTGG+AGG 0.459524 6_1:-446336 None:intergenic
GGTTTGTTTGAGTGTGAGGA+GGG 0.459961 6_1:-446300 None:intergenic
GGACTTCTGCTAAGGAAAAT+GGG 0.460054 6_1:+449267 Msa0867520:CDS
AAGAGAGTGAGATTGGAGAA+TGG 0.461120 6_1:-446145 None:intergenic
GTTGGAGGAGGAAGCGAGGA+GGG 0.462877 6_1:-446321 None:intergenic
TGGGACGCCGCATATGAATC+TGG 0.463411 6_1:-454408 None:intergenic
AATTACACTTCTATTTACAT+TGG 0.470334 6_1:-456819 None:intergenic
GGTGGTTGGAGGAGGAAGCG+AGG 0.470413 6_1:-446325 None:intergenic
AGGGATTCATGTTCCATTGA+AGG 0.471417 6_1:+449365 Msa0867520:CDS
TTGTGAACTGATCAGGGTCC+AGG 0.471481 6_1:-454036 None:intergenic
CCATCAAACGCAGAAGTAGA+AGG 0.472003 6_1:-446569 None:intergenic
GAGGAGCACATGAGTGAAGT+TGG 0.474276 6_1:+453896 Msa0867520:CDS
GTGATGAGAGTGGAGGAGGG+AGG 0.475627 6_1:-446123 None:intergenic
ATGGTGATGAGAGTGGAGGA+GGG 0.477102 6_1:-446126 None:intergenic
AGGTTCTATTGGTTCTGTCA+TGG 0.479874 6_1:-446177 None:intergenic
TAAAGGTGCTAAGATATAGA+TGG 0.480989 6_1:-451172 None:intergenic
AACATCTTGATCAGCGGCAC+TGG 0.483194 6_1:-449294 None:intergenic
CTCATGTGCTCCTCCAATTG+GGG 0.484387 6_1:-453887 None:intergenic
CTGTTACTCAAGTTCATGAC+TGG 0.488554 6_1:+449201 Msa0867520:CDS
AGCTTATGCGCAGCAATAGT+CGG 0.490223 6_1:+447940 Msa0867520:intron
GAAGAGATAGAATGTTAGCC+AGG 0.494110 6_1:-448022 None:intergenic
GAGGAGGGATTGTGTGGGGT+CGG 0.495490 6_1:-446285 None:intergenic
GGGATTAGGCCGTGCTCGAA+TGG 0.495534 6_1:-446242 None:intergenic
CTAGCCGAGCCAGGGGAGGA+GGG 0.500416 6_1:+448044 Msa0867520:CDS
TGTGATGTGGAAGGTTCTAT+TGG 0.502246 6_1:-446188 None:intergenic
ATTTCTATGATGCAGCTTCA+GGG 0.502579 6_1:+456405 Msa0867520:intron
TGGTGATAACCATAAATTGC+AGG 0.503356 6_1:+452522 Msa0867520:CDS
TTCTGCCCACAGTGAACAGA+TGG 0.508686 6_1:+453921 Msa0867520:CDS
AGATATAGATGGTAGACTCT+TGG 0.509010 6_1:-451161 None:intergenic
TTGGGTTGTGTGGATGATGA+TGG 0.509951 6_1:-446038 None:intergenic
CAAACATCAGCAACAGAAGC+AGG 0.512025 6_1:-446545 None:intergenic
CGAATCGGAGATTGTGGCGG+AGG 0.512705 6_1:-446354 None:intergenic
TTCTGAAAGGACTTCTGCTA+AGG 0.512893 6_1:+449259 Msa0867520:CDS
ATCACCACCACAACCTTCCA+CGG 0.514082 6_1:+446075 Msa0867520:five_prime_UTR
CAGATTCCAAACTGGCTCGC+AGG 0.515530 6_1:+454345 Msa0867520:intron
GGCGGAGGAGATGAGGTGGT+TGG 0.518669 6_1:-446339 None:intergenic
TTCGCGGCGAGGGTGGATCA+TGG 0.519024 6_1:-446219 None:intergenic
CAAAATTTGTGAACTGATCA+GGG 0.519211 6_1:-454042 None:intergenic
GGGTTTGTTTGAGTGTGAGG+AGG 0.519611 6_1:-446301 None:intergenic
GGATCCGAATTTGCAAAGAA+AGG 0.520206 6_1:-449155 None:intergenic
AAAATAATTTAGGAGAGATA+AGG 0.521940 6_1:+454529 Msa0867520:CDS
GAAAACACATTCACGGCAGT+TGG 0.523649 6_1:-452467 None:intergenic
GGCCGTGCTCGAATGGTTCG+CGG 0.523853 6_1:-446235 None:intergenic
TTGGAGAATGGTGATGAGAG+TGG 0.523922 6_1:-446133 None:intergenic
TGCTCGAATGGTTCGCGGCG+AGG 0.524160 6_1:-446230 None:intergenic
CTTTGGAACATATTTCTGAA+AGG 0.524901 6_1:+449246 Msa0867520:CDS
TGAGACGCCGTGGAAGGTTG+TGG 0.528046 6_1:-446082 None:intergenic
GACTGATGCATGCTCTGTCT+CGG 0.529353 6_1:+449322 Msa0867520:CDS
TCATCCCATCTGTTCACTGT+GGG 0.531454 6_1:-453926 None:intergenic
TTAAGTTGTCATCAAGTACC+AGG 0.537403 6_1:+449345 Msa0867520:CDS
CGGCGAGGGTGGATCATGGT+GGG 0.538335 6_1:-446215 None:intergenic
TAGCCGAGCCAGGGGAGGAG+GGG 0.538350 6_1:+448045 Msa0867520:CDS
ACCTGTGTGACCGATGCAAT+TGG 0.538591 6_1:-456553 None:intergenic
TCCTGTGCAGAGTGATCTAT+CGG 0.539231 6_1:-456625 None:intergenic
ATGGATAGATTTGAGCACCT+TGG 0.539243 6_1:+449077 Msa0867520:CDS
GCAAAAGCACGCACCTGAAG+AGG 0.539506 6_1:-446611 None:intergenic
GGGATTCATGTTCCATTGAA+GGG 0.539534 6_1:+449366 Msa0867520:CDS
ATTTCGCTTGCCAATTGCAT+CGG 0.540147 6_1:+456543 Msa0867520:three_prime_UTR
AGTGTGAGGAGGGATTGTGT+GGG 0.540150 6_1:-446290 None:intergenic
TTCAATGGAACATGAATCCC+TGG 0.541433 6_1:-449363 None:intergenic
GTCTTATCTGCAAAAGCACC+TGG 0.542117 6_1:+448004 Msa0867520:CDS
GCCTCTTCATCAGCCTGCGA+TGG 0.542685 6_1:-447972 None:intergenic
CTGGCTCGCAGGAGAGTCCA+CGG 0.547439 6_1:+454356 Msa0867520:CDS
GGTGGTGATGTGGCTTGAAG+TGG 0.549776 6_1:-446061 None:intergenic
AAGGAGGAGTTGAGCCTGCT+CGG 0.551144 6_1:-446390 None:intergenic
GGTTGGAGGAGGAAGCGAGG+AGG 0.551379 6_1:-446322 None:intergenic
GGTTGAGATCTGAAGCGAAT+CGG 0.554265 6_1:-446369 None:intergenic
CGAATGGTTCGCGGCGAGGG+TGG 0.556843 6_1:-446226 None:intergenic
CTGAAGCGAATCGGAGATTG+TGG 0.559351 6_1:-446360 None:intergenic
GCGGTGTGAGACGCCGTGGA+AGG 0.559980 6_1:-446088 None:intergenic
GCTTCAGATCTCAACCGAGC+AGG 0.561410 6_1:+446376 Msa0867520:CDS
TGAACTTGAGTAACAGGGAC+GGG 0.564622 6_1:-449194 None:intergenic
CGCCGCGAACCATTCGAGCA+CGG 0.566740 6_1:+446233 Msa0867520:CDS
TCCGATAGATCACTCTGCAC+AGG 0.566854 6_1:+456624 Msa0867520:three_prime_UTR
GATTCATTATCTCATCCAGC+TGG 0.570600 6_1:+453980 Msa0867520:CDS
GCCATCGCAGGCTGATGAAG+AGG 0.572306 6_1:+447971 Msa0867520:CDS
CAGTTTGGCGATAAGGCTGA+AGG 0.573370 6_1:+449110 Msa0867520:CDS
ATGAATCTGGTAATGCAAAT+GGG 0.573775 6_1:-454395 None:intergenic
AGATTGTGGCGGAGGAGATG+AGG 0.574003 6_1:-446346 None:intergenic
TATCTCTTCTAGCCGAGCCA+GGG 0.577420 6_1:+448036 Msa0867520:CDS
TGAACATCAGAGACACCAGC+TGG 0.580335 6_1:-453995 None:intergenic
CTTTATGTATGTGCAAAAGA+CGG 0.583475 6_1:-454677 None:intergenic
GCGGCGAGGGTGGATCATGG+TGG 0.586738 6_1:-446216 None:intergenic
GAGTATAAGACATGAAAGCA+AGG 0.586918 6_1:-454653 None:intergenic
TTCATGTGTACTTCAAGGAC+TGG 0.590213 6_1:+454610 Msa0867520:CDS
TCACGGAGGAGAGAGTATCA+AGG 0.592286 6_1:-446409 None:intergenic
GCCAATTGCATCGGTCACAC+AGG 0.596858 6_1:+456552 Msa0867520:three_prime_UTR
TCTTCTAGCCGAGCCAGGGG+AGG 0.600027 6_1:+448040 Msa0867520:CDS
GTAACAGGGACGGGAACCGC+GGG 0.601270 6_1:-449185 None:intergenic
TCAACTTTACTGTCTGCAAG+CGG 0.601903 6_1:+456436 Msa0867520:CDS
TTCATCCCATCTGTTCACTG+TGG 0.601962 6_1:-453927 None:intergenic
AACCAGCAACCTCTTATGGT+TGG 0.603151 6_1:+452502 Msa0867520:CDS
AGTAACAGGGACGGGAACCG+CGG 0.603705 6_1:-449186 None:intergenic
ATCTATCGGATTGCATAAGT+AGG 0.605601 6_1:-456611 None:intergenic
AGCGGATTAATCATCGGCAG+AGG 0.607369 6_1:+456454 Msa0867520:CDS
AGTTCTTGGAGCAGTTGGCA+AGG 0.610594 6_1:+451233 Msa0867520:CDS
CATGGTGGGAGCGTGTGATG+TGG 0.614824 6_1:-446201 None:intergenic
GGATGAGATAATGAATCATG+AGG 0.623920 6_1:-453974 None:intergenic
CAAACTGAACTAGGAACCCA+AGG 0.625171 6_1:-449094 None:intergenic
GGAAGGTTGTGGTGGTGATG+TGG 0.625394 6_1:-446071 None:intergenic
TGAAAGAGTTCATGTGATTG+TGG 0.625475 6_1:+452423 Msa0867520:CDS
ATAGATCACTCTGCACAGGA+TGG 0.625770 6_1:+456628 Msa0867520:three_prime_UTR
TGCATTACCAGATTCATATG+CGG 0.628991 6_1:+454401 Msa0867520:CDS
ATCTCTTCTAGCCGAGCCAG+GGG 0.631243 6_1:+448037 Msa0867520:CDS
TCTGCAAGCGGATTAATCAT+CGG 0.633859 6_1:+456448 Msa0867520:CDS
TGGCTCGCAGGAGAGTCCAC+GGG 0.633963 6_1:+454357 Msa0867520:CDS
GTGGGAGCGTGTGATGTGGA+AGG 0.635216 6_1:-446197 None:intergenic
TATCGGATTGCATAAGTAGG+TGG 0.637089 6_1:-456608 None:intergenic
ATCTGAGCATCCATAGACAA+TGG 0.637689 6_1:-451202 None:intergenic
AGTATAAGACATGAAAGCAA+GGG 0.639068 6_1:-454652 None:intergenic
GTTTGCGGTGTGAGACGCCG+TGG 0.639182 6_1:-446092 None:intergenic
TCATGTGCTCCTCCAATTGG+GGG 0.639194 6_1:-453886 None:intergenic
TTGTGGCGGAGGAGATGAGG+TGG 0.642507 6_1:-446343 None:intergenic
GTGTGAGGAGGGATTGTGTG+GGG 0.644885 6_1:-446289 None:intergenic
TCTGCCCACAGTGAACAGAT+GGG 0.648990 6_1:+453922 Msa0867520:CDS
GACGCCGTGGAAGGTTGTGG+TGG 0.654595 6_1:-446079 None:intergenic
TTGGAAACAAACCTTAACAG+AGG 0.661782 6_1:-449435 None:intergenic
TAAGTTGTCATCAAGTACCA+GGG 0.662209 6_1:+449346 Msa0867520:CDS
ATGAACTTGAGTAACAGGGA+CGG 0.665587 6_1:-449195 None:intergenic
CATAGCAACATCTTGATCAG+CGG 0.675580 6_1:-449300 None:intergenic
AAGCGAATCGGAGATTGTGG+CGG 0.676999 6_1:-446357 None:intergenic
GAGAATGGTGATGAGAGTGG+AGG 0.686069 6_1:-446130 None:intergenic
CGGAGGAGAGAGTATCAAGG+AGG 0.705309 6_1:-446406 None:intergenic
TTCGGATCCTGAGATGCCCG+CGG 0.705467 6_1:+449169 Msa0867520:CDS
GCAGGATCTTTATTCGAACG+CGG 0.706027 6_1:-446527 None:intergenic
AGTCATGAACTTGAGTAACA+GGG 0.713975 6_1:-449199 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATATATTCCATTTTATA+GGG - chr6_1:448161-448180 None:intergenic 10.0%
!!! AAATATATATTCCATTTTAT+AGG - chr6_1:448162-448181 None:intergenic 10.0%
!!! ACTTTTATTTTAATTTGTTA+AGG + chr6_1:448497-448516 Msa0867520:intron 10.0%
!! GATTCATTATATATATATAT+AGG + chr6_1:450679-450698 Msa0867520:intron 10.0%
!! TTCATTATATATATATATAG+GGG + chr6_1:450681-450700 Msa0867520:intron 10.0%
!! AATTTAACAATTGTATTTAT+GGG + chr6_1:452083-452102 Msa0867520:intron 10.0%
!! AAAAAAATAATTTGAAAATG+AGG - chr6_1:452196-452215 None:intergenic 10.0%
!! TTAAAAAAATTATTCAATGT+GGG - chr6_1:452784-452803 None:intergenic 10.0%
!! ATTAAAAAAATTATTCAATG+TGG - chr6_1:452785-452804 None:intergenic 10.0%
!!! TTATTTTACAAAATTAAAGA+TGG - chr6_1:456089-456108 None:intergenic 10.0%
!!! ATTTTCTTTAATTACTATCA+AGG + chr6_1:446802-446821 Msa0867520:intron 15.0%
!!! ATTTTAATTTGTTAAGGATA+AGG + chr6_1:448503-448522 Msa0867520:intron 15.0%
!!! ATTATTGGTAATTACAATTA+AGG + chr6_1:448686-448705 Msa0867520:intron 15.0%
!! TAATTACAATTAAGGATATT+TGG + chr6_1:448694-448713 Msa0867520:intron 15.0%
!!! ATAACTTTATTTCCTTTATA+AGG - chr6_1:449703-449722 None:intergenic 15.0%
!! AAAAAAAAAAAGAAGATATC+TGG - chr6_1:449987-450006 None:intergenic 15.0%
!!! TTTTTTGTTACAAAAAGTTT+AGG - chr6_1:450227-450246 None:intergenic 15.0%
!! TCAATTTAACAAACAATTAT+AGG - chr6_1:450315-450334 None:intergenic 15.0%
!!! TTTATGTTTTACCAATTTTA+TGG - chr6_1:450656-450675 None:intergenic 15.0%
!! TTTATGAATTGTAATAGATA+GGG - chr6_1:451650-451669 None:intergenic 15.0%
!!! TTTTATGAATTGTAATAGAT+AGG - chr6_1:451651-451670 None:intergenic 15.0%
!! CAATTTAACAATTGTATTTA+TGG + chr6_1:452082-452101 Msa0867520:intron 15.0%
!! GACTAAATTAAAAAATAGAA+TGG - chr6_1:452158-452177 None:intergenic 15.0%
!! TAAAAAAATTATTCAATGTG+GGG - chr6_1:452783-452802 None:intergenic 15.0%
!! TTCAAATAATAAGTTCAAAA+AGG - chr6_1:453818-453837 None:intergenic 15.0%
!!! TAAACATACATTTTTATGTT+GGG - chr6_1:454430-454449 None:intergenic 15.0%
!! GTATTCATAAAAAATTAAAG+AGG - chr6_1:454936-454955 None:intergenic 15.0%
!! ATTTCAGTTAAGTTAAAATT+GGG - chr6_1:455388-455407 None:intergenic 15.0%
!! AATTTCAGTTAAGTTAAAAT+TGG - chr6_1:455389-455408 None:intergenic 15.0%
!! AATCCAAAAAATGTATAATA+GGG - chr6_1:455448-455467 None:intergenic 15.0%
!! AAATCCAAAAAATGTATAAT+AGG - chr6_1:455449-455468 None:intergenic 15.0%
!!! TGACAATATTCTTTTTTAAA+AGG - chr6_1:456737-456756 None:intergenic 15.0%
!!! TAAGCAAAAAACAACTTTTT+AGG + chr6_1:447323-447342 Msa0867520:intron 20.0%
!! AACTAATGTATATGAATAGA+TGG - chr6_1:447697-447716 None:intergenic 20.0%
!!! ATGTTTTTGTAATTTTACCA+TGG + chr6_1:448116-448135 Msa0867520:intron 20.0%
!!! GCTTTTATTTTAATATGATC+AGG + chr6_1:448586-448605 Msa0867520:intron 20.0%
!!! TTTTAATATGATCAGGAATT+AGG + chr6_1:448593-448612 Msa0867520:intron 20.0%
!! TTTGACAATGCATATATTAT+TGG + chr6_1:448671-448690 Msa0867520:intron 20.0%
!! GTGTTAAAATATGTTAAGTA+AGG + chr6_1:448877-448896 Msa0867520:intron 20.0%
!!! TCTAAAATAAGAAAATCAAG+AGG - chr6_1:448963-448982 None:intergenic 20.0%
!! TCTAAAAATATAACACTAGT+AGG - chr6_1:449010-449029 None:intergenic 20.0%
!! CCAATTGTATAATTATGATT+CGG - chr6_1:449607-449626 None:intergenic 20.0%
!! TAGTAAATCTATCCTTATAA+AGG + chr6_1:449688-449707 Msa0867520:intron 20.0%
!! TTTGTTCAATTTATATCTTG+TGG + chr6_1:449957-449976 Msa0867520:intron 20.0%
!! ATCAATTCAATTGAATTTGA+AGG + chr6_1:450501-450520 Msa0867520:intron 20.0%
!! ATCAATTCAATTGAATTTGA+AGG + chr6_1:450501-450520 Msa0867520:intron 20.0%
!!! TTTTACCAATTTTATGGTTT+TGG - chr6_1:450650-450669 None:intergenic 20.0%
!! ACAATTATCATATAGATTCA+TGG - chr6_1:451406-451425 None:intergenic 20.0%
!! CAGATTATTAAAATTCTAGT+AGG + chr6_1:451451-451470 Msa0867520:intron 20.0%
!! CAAATCAATAGTAATTATGA+TGG + chr6_1:451513-451532 Msa0867520:intron 20.0%
!!! AAGAGAATTTTTAATCGAAA+AGG - chr6_1:451826-451845 None:intergenic 20.0%
!! CTAAAATCATGTTAAGATAT+TGG - chr6_1:451894-451913 None:intergenic 20.0%
!! TACAATTGTTAAATTGTAAC+AGG - chr6_1:452078-452097 None:intergenic 20.0%
!! AAATAATTTGAAAATGAGGA+TGG - chr6_1:452192-452211 None:intergenic 20.0%
!! CTGTTTATAACATTCAAATT+AGG + chr6_1:452263-452282 Msa0867520:intron 20.0%
!! AACTACCATTGATATTTAAA+GGG - chr6_1:452908-452927 None:intergenic 20.0%
!! AAACTACCATTGATATTTAA+AGG - chr6_1:452909-452928 None:intergenic 20.0%
!!! ATAAAATAGTTTTCTGCATT+CGG + chr6_1:452971-452990 Msa0867520:intron 20.0%
!!! ATACAATCTTATTGTAGTTT+TGG + chr6_1:453315-453334 Msa0867520:intron 20.0%
!!! TACAATCTTATTGTAGTTTT+GGG + chr6_1:453316-453335 Msa0867520:intron 20.0%
!! TAAAGATTATAACTTACGAT+GGG - chr6_1:453526-453545 None:intergenic 20.0%
!! ATAAAGATTATAACTTACGA+TGG - chr6_1:453527-453546 None:intergenic 20.0%
!! ATAAGAAAGGGAAATATAAA+AGG + chr6_1:453601-453620 Msa0867520:intron 20.0%
!! TAAGAAAGGGAAATATAAAA+GGG + chr6_1:453602-453621 Msa0867520:intron 20.0%
!! TGAAATACAATAACATTACA+AGG - chr6_1:453645-453664 None:intergenic 20.0%
!!! ATTTTCTCTTGTAACTTATT+AGG + chr6_1:453841-453860 Msa0867520:intron 20.0%
!!! GTAAACATACATTTTTATGT+TGG - chr6_1:454431-454450 None:intergenic 20.0%
!! CATAAAAATGTATGTTTACT+AGG + chr6_1:454432-454451 Msa0867520:intron 20.0%
!!! AATTTTATGTATGATTCAAC+TGG + chr6_1:454473-454492 Msa0867520:intron 20.0%
!!! TCTTTTCAGCAAAATAATTT+AGG + chr6_1:454519-454538 Msa0867520:intron 20.0%
!! AAAATAATTTAGGAGAGATA+AGG + chr6_1:454529-454548 Msa0867520:CDS 20.0%
!!! ATAAATTTTTTAGGGTTTGA+GGG + chr6_1:454857-454876 Msa0867520:intron 20.0%
!! ACTTTACTCAAACATATATA+AGG + chr6_1:454897-454916 Msa0867520:intron 20.0%
!! CGATTACATAACAATAAAAA+TGG - chr6_1:455295-455314 None:intergenic 20.0%
!! TTTCAGTTAAGTTAAAATTG+GGG - chr6_1:455387-455406 None:intergenic 20.0%
!!! AAATGGTGGTTTTAAAAATA+GGG - chr6_1:455419-455438 None:intergenic 20.0%
!!! AAAATGGTGGTTTTAAAAAT+AGG - chr6_1:455420-455439 None:intergenic 20.0%
!!! TATTTTTAAAACCACCATTT+TGG + chr6_1:455419-455438 Msa0867520:intron 20.0%
!! ATCCAAAAAATGTATAATAG+GGG - chr6_1:455447-455466 None:intergenic 20.0%
!!! TTTGGTCTTTTATTTCAATT+TGG + chr6_1:455730-455749 Msa0867520:intron 20.0%
!!! TTGGTCTTTTATTTCAATTT+GGG + chr6_1:455731-455750 Msa0867520:intron 20.0%
! CAAAGATTGAAATGAGAATT+TGG - chr6_1:446636-446655 None:intergenic 25.0%
! TTCAATGTAATCACATATGT+CGG - chr6_1:446761-446780 None:intergenic 25.0%
! TTCATAGGTAGTTAACTATA+AGG + chr6_1:446841-446860 Msa0867520:intron 25.0%
!!! AATTAGTAGTAGTTTTGCAT+TGG - chr6_1:446977-446996 None:intergenic 25.0%
!!! AAAAAGTAGTAGTTTTGCAT+TGG - chr6_1:447007-447026 None:intergenic 25.0%
! TTAAATATATCACGATCCAA+AGG - chr6_1:447071-447090 None:intergenic 25.0%
!!! TTTTGTTTCATCAGACTATT+TGG + chr6_1:447126-447145 Msa0867520:intron 25.0%
!! TTTTTGCTTATAAATGTGAC+CGG - chr6_1:447421-447440 None:intergenic 25.0%
!! TTTTTGCTTATAAATGTGAC+CGG + chr6_1:447421-447440 Msa0867520:intron 25.0%
! TTAAATCGTTTATCCAAACA+AGG + chr6_1:447468-447487 Msa0867520:intron 25.0%
! CTTCATATGGAAACATAAAT+AGG - chr6_1:447494-447513 None:intergenic 25.0%
! ATTTGAGAAGTAAATGTGAT+AGG + chr6_1:447632-447651 Msa0867520:intron 25.0%
! TTTGAGAAGTAAATGTGATA+GGG + chr6_1:447633-447652 Msa0867520:intron 25.0%
! ACTTCTAGTCTAATTATACT+TGG + chr6_1:447789-447808 Msa0867520:intron 25.0%
! ATTTCCAAACAAAGAGAAAT+AGG - chr6_1:448560-448579 None:intergenic 25.0%
!! ACATTTTACACCTTTCATTT+TGG + chr6_1:448773-448792 Msa0867520:intron 25.0%
! TATGCATTTCAATTGACTAA+AGG - chr6_1:448843-448862 None:intergenic 25.0%
! TAGGTCTAAGAACTAAAAAA+AGG - chr6_1:448991-449010 None:intergenic 25.0%
!!! GTTATCTTAGGTTTTAACTA+TGG + chr6_1:449058-449077 Msa0867520:intron 25.0%
! ACATAACAAAAGAAGACATT+TGG - chr6_1:449457-449476 None:intergenic 25.0%
! CCGAATCATAATTATACAAT+TGG + chr6_1:449604-449623 Msa0867520:intron 25.0%
! TATAAGGATAGATTTACTAC+CGG - chr6_1:449687-449706 None:intergenic 25.0%
! TTTGTTACAAAAAGTTTAGG+TGG - chr6_1:450224-450243 None:intergenic 25.0%
!! TACATATTTGCCTTTTTGTA+TGG + chr6_1:450265-450284 Msa0867520:intron 25.0%
! TCTTTCCAAAACCATAAAAT+TGG + chr6_1:450642-450661 Msa0867520:intron 25.0%
!!! GTTTTTTTGTCCAAATGAAA+AGG - chr6_1:450760-450779 None:intergenic 25.0%
! ATACAAACAAGGATATTGTT+GGG + chr6_1:450803-450822 Msa0867520:intron 25.0%
! TTCAGATGAAAATAAAGAGA+TGG + chr6_1:450849-450868 Msa0867520:intron 25.0%
! CATTAAAAGCAGAAAACATA+TGG - chr6_1:451265-451284 None:intergenic 25.0%
! ATAATGTATTCGAACATCAA+TGG + chr6_1:451291-451310 Msa0867520:intron 25.0%
!!! AAAATCTCGTTCATTTTAAC+TGG - chr6_1:451429-451448 None:intergenic 25.0%
! TTAAAATTCTAGTAGGAAAG+AGG + chr6_1:451458-451477 Msa0867520:intron 25.0%
!!! ATTACTATTGATTTGTGTTG+TGG - chr6_1:451508-451527 None:intergenic 25.0%
! TGCAGTATTTATATTACTGA+TGG + chr6_1:452231-452250 Msa0867520:intron 25.0%
! TTCAAATTAGGATATTGAGT+TGG + chr6_1:452275-452294 Msa0867520:intron 25.0%
!!! CACATTTTTTTTTTGTTGAC+AGG + chr6_1:452381-452400 Msa0867520:intron 25.0%
! CTAAAAAGAAAACACATTCA+CGG - chr6_1:452477-452496 None:intergenic 25.0%
! ACTACCATTGATATTTAAAG+GGG - chr6_1:452907-452926 None:intergenic 25.0%
!! TAAAATAGTTTTCTGCATTC+GGG + chr6_1:452972-452991 Msa0867520:intron 25.0%
!!! TTTTAACTAACTCGTTTTCA+AGG - chr6_1:453260-453279 None:intergenic 25.0%
! AAAACGAGTTAGTTAAAATC+AGG + chr6_1:453262-453281 Msa0867520:intron 25.0%
!!! AATCCTATTAACTTGTGATA+AGG + chr6_1:453761-453780 Msa0867520:intron 25.0%
!!! ATCCTATTAACTTGTGATAA+GGG + chr6_1:453762-453781 Msa0867520:intron 25.0%
!!! GTCTAAAAGTTAGTTGATTT+TGG + chr6_1:454127-454146 Msa0867520:intron 25.0%
! GCAGTCAAAAATAATAGAAA+AGG - chr6_1:454326-454345 None:intergenic 25.0%
! GCACATACATAAAGATAAAA+TGG + chr6_1:454686-454705 Msa0867520:CDS 25.0%
! TGAATACATTTATACACAGA+GGG - chr6_1:454747-454766 None:intergenic 25.0%
! TTGAATACATTTATACACAG+AGG - chr6_1:454748-454767 None:intergenic 25.0%
!!! TGGAGATGGATAAATTTTTT+AGG + chr6_1:454848-454867 Msa0867520:intron 25.0%
!!! GGAGATGGATAAATTTTTTA+GGG + chr6_1:454849-454868 Msa0867520:intron 25.0%
!!! GATAAATTTTTTAGGGTTTG+AGG + chr6_1:454856-454875 Msa0867520:intron 25.0%
! TTATGAATACCCTTGAAATT+TGG + chr6_1:454946-454965 Msa0867520:intron 25.0%
! TAATACAATGGTCAATAATG+CGG - chr6_1:455191-455210 None:intergenic 25.0%
! AAACTCAACAGATAATACAA+TGG - chr6_1:455203-455222 None:intergenic 25.0%
! AGTCAATATTACTGTCAAAT+GGG + chr6_1:455231-455250 Msa0867520:intron 25.0%
!!! AATGGTGGTTTTAAAAATAG+GGG - chr6_1:455418-455437 None:intergenic 25.0%
! TCCAAAAAATGTATAATAGG+GGG - chr6_1:455446-455465 None:intergenic 25.0%
! ACAAATCATCAAAATTGATG+GGG - chr6_1:455476-455495 None:intergenic 25.0%
! GACAAATCATCAAAATTGAT+GGG - chr6_1:455477-455496 None:intergenic 25.0%
! TGACAAATCATCAAAATTGA+TGG - chr6_1:455478-455497 None:intergenic 25.0%
! TGTCATTCTTATTAATGACA+TGG + chr6_1:455493-455512 Msa0867520:intron 25.0%
! AGGAAATTATTGTGAAGTAT+AGG + chr6_1:455665-455684 Msa0867520:intron 25.0%
! GGAAATTATTGTGAAGTATA+GGG + chr6_1:455666-455685 Msa0867520:intron 25.0%
! TTATAACATAGCTTAAGCAT+TGG - chr6_1:455758-455777 None:intergenic 25.0%
!! TGTTGAAATAGAACAGTTTT+AGG + chr6_1:455878-455897 Msa0867520:intron 25.0%
! ATTATGTATTCAAGAGGAAA+TGG - chr6_1:455946-455965 None:intergenic 25.0%
TTTAATTACTATCAAGGTCG+TGG + chr6_1:446808-446827 Msa0867520:intron 30.0%
AAAATGCTAAAGAGTAGCAT+CGG + chr6_1:446864-446883 Msa0867520:intron 30.0%
AGAAACATTGTGTTGAATAG+TGG + chr6_1:446903-446922 Msa0867520:intron 30.0%
TTTCCGAACTTTAATTATCC+AGG + chr6_1:447028-447047 Msa0867520:intron 30.0%
ACTCCTGGATAATTAAAGTT+CGG - chr6_1:447034-447053 None:intergenic 30.0%
TTTCATCAGACTATTTGGAT+TGG + chr6_1:447131-447150 Msa0867520:intron 30.0%
!! AAACATAAATAGGCCTTGTT+TGG - chr6_1:447484-447503 None:intergenic 30.0%
! ATACATTAGTTTACGAGAAG+AGG + chr6_1:447706-447725 Msa0867520:intron 30.0%
ACTAGAAGTCACTATATCAT+AGG - chr6_1:447778-447797 None:intergenic 30.0%
GTCTAATTATACTTGGAAAG+TGG + chr6_1:447796-447815 Msa0867520:intron 30.0%
!!! TTTTGAGCTTGCTAATTTTG+AGG + chr6_1:447858-447877 Msa0867520:intron 30.0%
CATAGGAAATAATCTATCCA+TGG - chr6_1:448136-448155 None:intergenic 30.0%
TTCCTATGTACCCTATAAAA+TGG + chr6_1:448148-448167 Msa0867520:intron 30.0%
! TTCCATTTTATAGGGTACAT+AGG - chr6_1:448153-448172 None:intergenic 30.0%
AACCAAATAAATGTTCTGCT+TGG - chr6_1:448187-448206 None:intergenic 30.0%
GGTATGAGTCTCAAAAATAA+GGG - chr6_1:448288-448307 None:intergenic 30.0%
ATAACATGCCACTGATAATT+GGG - chr6_1:448309-448328 None:intergenic 30.0%
AATAACATGCCACTGATAAT+TGG - chr6_1:448310-448329 None:intergenic 30.0%
TTTGTTAAGGATAAGGATGT+CGG + chr6_1:448510-448529 Msa0867520:intron 30.0%
CAAAGAGAAATAGGTATCAA+TGG - chr6_1:448551-448570 None:intergenic 30.0%
! GATACCTATTTCTCTTTGTT+TGG + chr6_1:448553-448572 Msa0867520:intron 30.0%
TATGATCAGGAATTAGGATA+AGG + chr6_1:448599-448618 Msa0867520:intron 30.0%
GCTATGAAAGATGCATTATT+GGG - chr6_1:448744-448763 None:intergenic 30.0%
TGCTATGAAAGATGCATTAT+TGG - chr6_1:448745-448764 None:intergenic 30.0%
CAGATAAGCGTAAAACTAAA+AGG - chr6_1:449033-449052 None:intergenic 30.0%
TTCTCCTTTCTTTGCAAATT+CGG + chr6_1:449151-449170 Msa0867520:CDS 30.0%
GCAAAATATATCTTCTGCTT+TGG + chr6_1:449229-449248 Msa0867520:CDS 30.0%
!! CTTTGGAACATATTTCTGAA+AGG + chr6_1:449246-449265 Msa0867520:CDS 30.0%
! TCTTTAGTTCAGACATTTGA+AGG - chr6_1:449537-449556 None:intergenic 30.0%
! ACAAAAAGTTTAGGTGGATT+CGG - chr6_1:450218-450237 None:intergenic 30.0%
! GTAATTTGTGCCATACAAAA+AGG - chr6_1:450278-450297 None:intergenic 30.0%
! GAATTGATAGTTAATTCTCC+AGG - chr6_1:450489-450508 None:intergenic 30.0%
! GAATTGATAGTTAATTCTCC+AGG - chr6_1:450489-450508 None:intergenic 30.0%
TAGACCAACAAAAAACATGA+AGG + chr6_1:450714-450733 Msa0867520:intron 30.0%
GATACAAACAAGGATATTGT+TGG + chr6_1:450802-450821 Msa0867520:intron 30.0%
ATAAAGAGATGGTTGAGATT+TGG + chr6_1:450860-450879 Msa0867520:intron 30.0%
TTGACTACAGAGTTACTTAA+AGG - chr6_1:451006-451025 None:intergenic 30.0%
! GTATCTTTCTTCACATGTTT+TGG + chr6_1:451058-451077 Msa0867520:intron 30.0%
GATGTCTGTTGAGATTATTA+TGG + chr6_1:451088-451107 Msa0867520:intron 30.0%
GTTGAGATTATTATGGAAAG+TGG + chr6_1:451095-451114 Msa0867520:intron 30.0%
!! TAAAGGTGCTAAGATATAGA+TGG - chr6_1:451175-451194 None:intergenic 30.0%
TAGACAATGGCATATCTTAA+AGG - chr6_1:451192-451211 None:intergenic 30.0%
TTAAGATATGCCATTGTCTA+TGG + chr6_1:451192-451211 Msa0867520:CDS 30.0%
TAAATTTCACATTACCACTC+AGG - chr6_1:451379-451398 None:intergenic 30.0%
CAAAGACTCTCAAATTTCTT+GGG - chr6_1:451542-451561 None:intergenic 30.0%
CAAGAAATTTGAGAGTCTTT+GGG + chr6_1:451541-451560 Msa0867520:intron 30.0%
! ATTTGGATAAAGGATTGGTA+AGG - chr6_1:451598-451617 None:intergenic 30.0%
TCATTCGGTTATTTGGATAA+AGG - chr6_1:451608-451627 None:intergenic 30.0%
AATTAAGGAATTGTAGGAGA+AGG - chr6_1:451779-451798 None:intergenic 30.0%
GCATCTAATTAAGGAATTGT+AGG - chr6_1:451785-451804 None:intergenic 30.0%
TTCCTTAATTAGATGCCTAA+CGG + chr6_1:451789-451808 Msa0867520:intron 30.0%
TAAGAATCCAAGCTATACAA+TGG - chr6_1:451920-451939 None:intergenic 30.0%
GATAAAAACTACCCAATAGT+TGG - chr6_1:451954-451973 None:intergenic 30.0%
TTTATCTCACACACATTAGA+AGG + chr6_1:451968-451987 Msa0867520:intron 30.0%
! ATTGTATTTATGGGCCTTTT+TGG + chr6_1:452092-452111 Msa0867520:intron 30.0%
!! AATTAGGATATTGAGTTGGT+AGG + chr6_1:452279-452298 Msa0867520:intron 30.0%
!!! ATATTGAGTTGGTAGGTTTT+GGG + chr6_1:452286-452305 Msa0867520:intron 30.0%
! CGTGAATGTGTTTTCTTTTT+AGG + chr6_1:452475-452494 Msa0867520:CDS 30.0%
TTCTATTCTACATCTCTCTT+TGG + chr6_1:452581-452600 Msa0867520:intron 30.0%
AATATATGACAATCGGGTAT+GGG - chr6_1:452675-452694 None:intergenic 30.0%
AAATATATGACAATCGGGTA+TGG - chr6_1:452676-452695 None:intergenic 30.0%
ACGGGTAAATATATGACAAT+CGG - chr6_1:452682-452701 None:intergenic 30.0%
AAATTATTCAATGTGGGGAT+GGG - chr6_1:452778-452797 None:intergenic 30.0%
AAAATTATTCAATGTGGGGA+TGG - chr6_1:452779-452798 None:intergenic 30.0%
TGTTAAAGTGAGCATATTGT+TGG - chr6_1:452859-452878 None:intergenic 30.0%
AAAATTACTGCGATGAAATG+TGG - chr6_1:453199-453218 None:intergenic 30.0%
CACATTTCATTGCAGTAATT+TGG + chr6_1:453226-453245 Msa0867520:intron 30.0%
TCCCATGGTAAATATAAGAA+AGG + chr6_1:453588-453607 Msa0867520:intron 30.0%
CCCTTTCTTATATTTACCAT+GGG - chr6_1:453592-453611 None:intergenic 30.0%
CCCATGGTAAATATAAGAAA+GGG + chr6_1:453589-453608 Msa0867520:intron 30.0%
TCCCTTTCTTATATTTACCA+TGG - chr6_1:453593-453612 None:intergenic 30.0%
TACCCTTATCACAAGTTAAT+AGG - chr6_1:453767-453786 None:intergenic 30.0%
CAAAATTTGTGAACTGATCA+GGG - chr6_1:454045-454064 None:intergenic 30.0%
ACAAAATTTGTGAACTGATC+AGG - chr6_1:454046-454065 None:intergenic 30.0%
! TGATCAGTTCACAAATTTTG+TGG + chr6_1:454045-454064 Msa0867520:CDS 30.0%
CTGTGTTCTATAAAGATGTA+TGG + chr6_1:454180-454199 Msa0867520:intron 30.0%
TAAAGATGTATGGATGAAGA+TGG + chr6_1:454190-454209 Msa0867520:intron 30.0%
AAAGATGTATGGATGAAGAT+GGG + chr6_1:454191-454210 Msa0867520:intron 30.0%
! ATGAATCTGGTAATGCAAAT+GGG - chr6_1:454398-454417 None:intergenic 30.0%
! TATGAATCTGGTAATGCAAA+TGG - chr6_1:454399-454418 None:intergenic 30.0%
AGTATAAGACATGAAAGCAA+GGG - chr6_1:454655-454674 None:intergenic 30.0%
CTTTATGTATGTGCAAAAGA+CGG - chr6_1:454680-454699 None:intergenic 30.0%
TGAAATAGTGCTTATCTTCA+TGG + chr6_1:454828-454847 Msa0867520:intron 30.0%
GTACACATTCCAAATTTCAA+GGG - chr6_1:454958-454977 None:intergenic 30.0%
AGTACACATTCCAAATTTCA+AGG - chr6_1:454959-454978 None:intergenic 30.0%
! AATTTGGAATGTGTACTTCA+AGG + chr6_1:454962-454981 Msa0867520:intron 30.0%
TTCGCAAAACATTCTTTACA+TGG - chr6_1:455079-455098 None:intergenic 30.0%
AATACAATGGTCAATAATGC+GGG - chr6_1:455190-455209 None:intergenic 30.0%
CAGTCAATATTACTGTCAAA+TGG + chr6_1:455230-455249 Msa0867520:intron 30.0%
!!! ATGGTGGTTTTAAAAATAGG+GGG - chr6_1:455417-455436 None:intergenic 30.0%
!!! TCCCCCTATTATACATTTTT+TGG + chr6_1:455442-455461 Msa0867520:intron 30.0%
CAAATCATCAAAATTGATGG+GGG - chr6_1:455475-455494 None:intergenic 30.0%
TACAGTTGTATGACAGAAAA+CGG + chr6_1:455641-455660 Msa0867520:intron 30.0%
!!! GACCAACATTTTAGTTCTTT+TGG + chr6_1:455712-455731 Msa0867520:intron 30.0%
GACCAAAAGAACTAAAATGT+TGG - chr6_1:455717-455736 None:intergenic 30.0%
AAGAGGAAATGGAATACAAA+AGG - chr6_1:455935-455954 None:intergenic 30.0%
!! AGAGGTATTATGTATTCAAG+AGG - chr6_1:455952-455971 None:intergenic 30.0%
TAGTTATGTGTGTCTGTATT+AGG - chr6_1:456146-456165 None:intergenic 30.0%
TTAACAGCATCTAGTCAAAA+AGG + chr6_1:456257-456276 Msa0867520:intron 30.0%
! CATTAAAGAGCGATAGTTTT+TGG + chr6_1:456500-456519 Msa0867520:exon 30.0%
!! TAAAGAGTAGCATCGGTTAA+GGG + chr6_1:446871-446890 Msa0867520:intron 35.0%
!!! GTGTAGTTTTTTGTGTCCTT+TGG + chr6_1:447052-447071 Msa0867520:intron 35.0%
!! AGCTTGTTAGCAACTTCATA+TGG - chr6_1:447507-447526 None:intergenic 35.0%
AGCCAAGCAGAACATTTATT+TGG + chr6_1:448182-448201 Msa0867520:intron 35.0%
GTATTCACTAGATAGTGAAG+TGG + chr6_1:448238-448257 Msa0867520:intron 35.0%
GGGTATGAGTCTCAAAAATA+AGG - chr6_1:448289-448308 None:intergenic 35.0%
AATGACGTTGTAACAAGCTT+TGG + chr6_1:448333-448352 Msa0867520:intron 35.0%
!! GATTTCAATTAGAGCACTGT+GGG - chr6_1:448384-448403 None:intergenic 35.0%
!! TGATTTCAATTAGAGCACTG+TGG - chr6_1:448385-448404 None:intergenic 35.0%
CAGTGCTCTAATTGAAATCA+CGG + chr6_1:448385-448404 Msa0867520:intron 35.0%
ATTTATATGCATGTCTGTGC+TGG + chr6_1:448410-448429 Msa0867520:intron 35.0%
TGTCTCGTTTCAAAACAAAG+TGG - chr6_1:448477-448496 None:intergenic 35.0%
GGAATTAGGATAAGGATGTT+TGG + chr6_1:448607-448626 Msa0867520:intron 35.0%
GTATGTCATGCCAAAATGAA+AGG - chr6_1:448786-448805 None:intergenic 35.0%
TTATCTGACGTCGTTATCTT+AGG + chr6_1:449046-449065 Msa0867520:intron 35.0%
AGTCATGAACTTGAGTAACA+GGG - chr6_1:449202-449221 None:intergenic 35.0%
! TTAAGTTGTCATCAAGTACC+AGG + chr6_1:449345-449364 Msa0867520:CDS 35.0%
TAAGTTGTCATCAAGTACCA+GGG + chr6_1:449346-449365 Msa0867520:CDS 35.0%
AGATTTAGTGATCCCTTCAA+TGG - chr6_1:449381-449400 None:intergenic 35.0%
AAGCATGCATCTGACATAAA+AGG + chr6_1:449410-449429 Msa0867520:CDS 35.0%
CATAAAAGGTTCCTCTGTTA+AGG + chr6_1:449424-449443 Msa0867520:CDS 35.0%
TTGGAAACAAACCTTAACAG+AGG - chr6_1:449438-449457 None:intergenic 35.0%
CTGAACTAAAGAACCTAAGT+AGG + chr6_1:449545-449564 Msa0867520:intron 35.0%
AACTAAAGAACCTAAGTAGG+CGG + chr6_1:449548-449567 Msa0867520:intron 35.0%
TTGGTAGAGAACAAGATATC+AGG - chr6_1:450037-450056 None:intergenic 35.0%
GATTGAGAATAAAACGACTG+TGG - chr6_1:450367-450386 None:intergenic 35.0%
AAACAAATCCAGAATCGTTG+TGG - chr6_1:450464-450483 None:intergenic 35.0%
! GATTCTGGATTTGTTTATCC+TGG + chr6_1:450468-450487 Msa0867520:intron 35.0%
AAACAAATCCAGAATCGTTG+TGG - chr6_1:450464-450483 None:intergenic 35.0%
! GATTCTGGATTTGTTTATCC+TGG + chr6_1:450468-450487 Msa0867520:intron 35.0%
!!! TGGACCTTCATGTTTTTTGT+TGG - chr6_1:450721-450740 None:intergenic 35.0%
!! CAAAAGTGCACCTTTTCATT+TGG + chr6_1:450747-450766 Msa0867520:intron 35.0%
ACCAATATCCACTAGTAGAA+TGG + chr6_1:450778-450797 Msa0867520:intron 35.0%
CCAATATCCACTAGTAGAAT+GGG + chr6_1:450779-450798 Msa0867520:intron 35.0%
CAATATCCACTAGTAGAATG+GGG + chr6_1:450780-450799 Msa0867520:intron 35.0%
AAACAAGGATATTGTTGGGT+GGG + chr6_1:450807-450826 Msa0867520:intron 35.0%
!! TGGTTGAGATTTGGTGTAAA+CGG + chr6_1:450869-450888 Msa0867520:intron 35.0%
TCTGTGATAGTTGAATCCTT+AGG + chr6_1:450966-450985 Msa0867520:intron 35.0%
! AAGTTGTGTTTTGTCATTGC+AGG + chr6_1:451128-451147 Msa0867520:intron 35.0%
AGATATAGATGGTAGACTCT+TGG - chr6_1:451164-451183 None:intergenic 35.0%
TCAGATGCTACAATAGTTCT+TGG + chr6_1:451219-451238 Msa0867520:CDS 35.0%
AATGGCATTTACCTTCTAAC+AGG + chr6_1:451309-451328 Msa0867520:intron 35.0%
TTTACCTTCTAACAGGAATG+TGG + chr6_1:451316-451335 Msa0867520:intron 35.0%
TTACCTTCTAACAGGAATGT+GGG + chr6_1:451317-451336 Msa0867520:intron 35.0%
AATTCTAGTAGGAAAGAGGA+TGG + chr6_1:451462-451481 Msa0867520:intron 35.0%
ATTCTAGTAGGAAAGAGGAT+GGG + chr6_1:451463-451482 Msa0867520:intron 35.0%
CCAAAGACTCTCAAATTTCT+TGG - chr6_1:451543-451562 None:intergenic 35.0%
CCAAGAAATTTGAGAGTCTT+TGG + chr6_1:451540-451559 Msa0867520:intron 35.0%
CGGTTATTTGGATAAAGGAT+TGG - chr6_1:451603-451622 None:intergenic 35.0%
TGTAATAGATAGGGAAGTTG+TGG - chr6_1:451641-451660 None:intergenic 35.0%
TTCCGTTAGGCATCTAATTA+AGG - chr6_1:451794-451813 None:intergenic 35.0%
TAATTAGATGCCTAACGGAA+AGG + chr6_1:451794-451813 Msa0867520:intron 35.0%
TAGAGCCATTAATGATAGTC+CGG - chr6_1:451860-451879 None:intergenic 35.0%
TTAGTCTCCATTGTATAGCT+TGG + chr6_1:451910-451929 Msa0867520:intron 35.0%
AAAGTGACTCATCCAACTAT+TGG + chr6_1:451939-451958 Msa0867520:intron 35.0%
AAGTGACTCATCCAACTATT+GGG + chr6_1:451940-451959 Msa0867520:intron 35.0%
TAGTGCAGCTAACTAATGAA+TGG - chr6_1:452005-452024 None:intergenic 35.0%
AAGAATACGACATGCCAAAA+AGG - chr6_1:452109-452128 None:intergenic 35.0%
!!! GATATTGAGTTGGTAGGTTT+TGG + chr6_1:452285-452304 Msa0867520:intron 35.0%
TGAAAGAGTTCATGTGATTG+TGG + chr6_1:452423-452442 Msa0867520:CDS 35.0%
! GGCAATACAAATACGTTTTG+AGG - chr6_1:452449-452468 None:intergenic 35.0%
TGGTGATAACCATAAATTGC+AGG + chr6_1:452522-452541 Msa0867520:CDS 35.0%
AAAACAGAGAGTGAATACAG+AGG - chr6_1:452555-452574 None:intergenic 35.0%
TACATCTCTCTTTGGTACAA+AGG + chr6_1:452589-452608 Msa0867520:intron 35.0%
ATATATGACAATCGGGTATG+GGG - chr6_1:452674-452693 None:intergenic 35.0%
CGGGTAAATATATGACAATC+GGG - chr6_1:452681-452700 None:intergenic 35.0%
AATTATTCAATGTGGGGATG+GGG - chr6_1:452777-452796 None:intergenic 35.0%
GCATTACAACATTTCTCTAG+AGG - chr6_1:452831-452850 None:intergenic 35.0%
GTTGCCCCTTTAAATATCAA+TGG + chr6_1:452900-452919 Msa0867520:intron 35.0%
AAAACCCGTCAAATTGAGTT+TGG + chr6_1:453103-453122 Msa0867520:intron 35.0%
!! TGGAAACTGGTAGTTTGTTT+GGG - chr6_1:453179-453198 None:intergenic 35.0%
TTAGCAACACTACTTACGAA+AGG + chr6_1:453341-453360 Msa0867520:intron 35.0%
AAGTAGTAGAGTATGGCATT+GGG - chr6_1:453375-453394 None:intergenic 35.0%
AAAGTAGTAGAGTATGGCAT+TGG - chr6_1:453376-453395 None:intergenic 35.0%
CACTGCAAGAATAAGCATTT+CGG + chr6_1:453665-453684 Msa0867520:intron 35.0%
TAAGTTCAAAAAGGAGAGTG+AGG - chr6_1:453809-453828 None:intergenic 35.0%
GGATGAGATAATGAATCATG+AGG - chr6_1:453977-453996 None:intergenic 35.0%
! TACTTGTAGCTGACTTAACA+TGG + chr6_1:454086-454105 Msa0867520:intron 35.0%
TGCATTACCAGATTCATATG+CGG + chr6_1:454401-454420 Msa0867520:CDS 35.0%
GAGTATAAGACATGAAAGCA+AGG - chr6_1:454656-454675 None:intergenic 35.0%
!!! AATTTTTTAGGGTTTGAGGG+AGG + chr6_1:454860-454879 Msa0867520:intron 35.0%
!!! ATTTTTTAGGGTTTGAGGGA+GGG + chr6_1:454861-454880 Msa0867520:intron 35.0%
TTTGAACAAAAGACGTGACA+AGG - chr6_1:455016-455035 None:intergenic 35.0%
TATTACTGTCAAATGGGTCT+CGG + chr6_1:455237-455256 Msa0867520:intron 35.0%
CAATAAAAATGGAGAACACG+CGG - chr6_1:455284-455303 None:intergenic 35.0%
TCTACTCTTTCAATGAGACT+CGG + chr6_1:455329-455348 Msa0867520:intron 35.0%
! TGAGACTCGGTTTAAATTGT+AGG + chr6_1:455342-455361 Msa0867520:intron 35.0%
! GTTTTCTGTCATACAACTGT+AGG - chr6_1:455642-455661 None:intergenic 35.0%
!! CCTTGTAGTTATTTTCAGCT+CGG - chr6_1:455693-455712 None:intergenic 35.0%
GCTATGTTATAAGTTCCGAT+TGG + chr6_1:455766-455785 Msa0867520:intron 35.0%
!!! GAAATAGAACAGTTTTAGGC+TGG + chr6_1:455882-455901 Msa0867520:intron 35.0%
TGGAGTTATTATCTGAGCTT+GGG + chr6_1:455902-455921 Msa0867520:intron 35.0%
!! ATTAGGCATTGATGAGGAAA+TGG - chr6_1:456129-456148 None:intergenic 35.0%
ATTAAGCAGCACATTGCTAA+CGG + chr6_1:456286-456305 Msa0867520:intron 35.0%
! TATTTCTATGATGCAGCTTC+AGG + chr6_1:456404-456423 Msa0867520:intron 35.0%
ATTTCTATGATGCAGCTTCA+GGG + chr6_1:456405-456424 Msa0867520:intron 35.0%
ATCTATCGGATTGCATAAGT+AGG - chr6_1:456614-456633 None:intergenic 35.0%
AAGAGAGTGAGATTGGAGAA+TGG - chr6_1:446148-446167 None:intergenic 40.0%
AGAGAGAAAGAGAGTGAGAT+TGG - chr6_1:446155-446174 None:intergenic 40.0%
!! AGGTTCTATTGGTTCTGTCA+TGG - chr6_1:446180-446199 None:intergenic 40.0%
TGTGATGTGGAAGGTTCTAT+TGG - chr6_1:446191-446210 None:intergenic 40.0%
!!! AGAAGATGAGTTTTGGGATG+GGG - chr6_1:446265-446284 None:intergenic 40.0%
!!! GAGAAGATGAGTTTTGGGAT+GGG - chr6_1:446266-446285 None:intergenic 40.0%
!! GTCGTTTTCATGGTGAATCA+CGG - chr6_1:446429-446448 None:intergenic 40.0%
!! CTAAAGAGTAGCATCGGTTA+AGG + chr6_1:446870-446889 Msa0867520:intron 40.0%
GACACAAAAAACTACACTCC+TGG - chr6_1:447049-447068 None:intergenic 40.0%
TGATAAACACTTACTCCCTC+CGG + chr6_1:447291-447310 Msa0867520:intron 40.0%
TGCTTATAAATGTGACCGGA+GGG - chr6_1:447425-447444 None:intergenic 40.0%
TTGCTTATAAATGTGACCGG+AGG - chr6_1:447424-447443 None:intergenic 40.0%
TTGCTTATAAATGTGACCGG+AGG + chr6_1:447424-447443 Msa0867520:intron 40.0%
TGCTTATAAATGTGACCGGA+GGG + chr6_1:447425-447444 Msa0867520:intron 40.0%
! TGAGGCGTTAATACTGTTGA+TGG + chr6_1:447876-447895 Msa0867520:intron 40.0%
GAAGAGATAGAATGTTAGCC+AGG - chr6_1:448025-448044 None:intergenic 40.0%
AGATAGTGAAGTGGATGATG+TGG + chr6_1:448247-448266 Msa0867520:intron 40.0%
GATAGTGAAGTGGATGATGT+GGG + chr6_1:448248-448267 Msa0867520:intron 40.0%
GACTCATACCCAATTATCAG+TGG + chr6_1:448298-448317 Msa0867520:intron 40.0%
AGGTTGCTGATATGAATAGC+CGG + chr6_1:448440-448459 Msa0867520:intron 40.0%
ATGGATAGATTTGAGCACCT+TGG + chr6_1:449077-449096 Msa0867520:CDS 40.0%
TGGATAGATTTGAGCACCTT+GGG + chr6_1:449078-449097 Msa0867520:CDS 40.0%
GGATCCGAATTTGCAAAGAA+AGG - chr6_1:449158-449177 None:intergenic 40.0%
ATGAACTTGAGTAACAGGGA+CGG - chr6_1:449198-449217 None:intergenic 40.0%
CAGTCATGAACTTGAGTAAC+AGG - chr6_1:449203-449222 None:intergenic 40.0%
CTGTTACTCAAGTTCATGAC+TGG + chr6_1:449201-449220 Msa0867520:CDS 40.0%
! TTCTGAAAGGACTTCTGCTA+AGG + chr6_1:449259-449278 Msa0867520:CDS 40.0%
AGGACTTCTGCTAAGGAAAA+TGG + chr6_1:449266-449285 Msa0867520:CDS 40.0%
GGACTTCTGCTAAGGAAAAT+GGG + chr6_1:449267-449286 Msa0867520:CDS 40.0%
CATAGCAACATCTTGATCAG+CGG - chr6_1:449303-449322 None:intergenic 40.0%
TTCAATGGAACATGAATCCC+TGG - chr6_1:449366-449385 None:intergenic 40.0%
AGGGATTCATGTTCCATTGA+AGG + chr6_1:449365-449384 Msa0867520:CDS 40.0%
GGGATTCATGTTCCATTGAA+GGG + chr6_1:449366-449385 Msa0867520:CDS 40.0%
TAGATTTACTACCGGTGGTT+TGG - chr6_1:449679-449698 None:intergenic 40.0%
AAGGATAGATTTACTACCGG+TGG - chr6_1:449684-449703 None:intergenic 40.0%
TGAATCCATAACAGCTCTTC+AGG + chr6_1:449771-449790 Msa0867520:intron 40.0%
AATAGCCTGAAGAGCTGTTA+TGG - chr6_1:449779-449798 None:intergenic 40.0%
TGTTCTCTACCAACACATGT+TGG + chr6_1:450044-450063 Msa0867520:intron 40.0%
! TCGAACACACAACCTTTTGA+GGG - chr6_1:450097-450116 None:intergenic 40.0%
! ATCGAACACACAACCTTTTG+AGG - chr6_1:450098-450117 None:intergenic 40.0%
TACCTTTGTAAGTGCCCTTT+GGG + chr6_1:450162-450181 Msa0867520:intron 40.0%
AAAAGGGCAGTAAAAGGTCT+AGG - chr6_1:450342-450361 None:intergenic 40.0%
! TAGACCTTTTACTGCCCTTT+TGG + chr6_1:450341-450360 Msa0867520:intron 40.0%
TAAAACGACTGTGGCCAAAA+GGG - chr6_1:450358-450377 None:intergenic 40.0%
ATAAAACGACTGTGGCCAAA+AGG - chr6_1:450359-450378 None:intergenic 40.0%
! AAGGTGCACTTTTGCTAACT+TGG - chr6_1:450741-450760 None:intergenic 40.0%
! CCCATTCTACTAGTGGATAT+TGG - chr6_1:450782-450801 None:intergenic 40.0%
TTGTATCCCCATTCTACTAG+TGG - chr6_1:450789-450808 None:intergenic 40.0%
GTAGAATGGGGATACAAACA+AGG + chr6_1:450792-450811 Msa0867520:intron 40.0%
CAAACAAGGATATTGTTGGG+TGG + chr6_1:450806-450825 Msa0867520:intron 40.0%
TTAAGATGATGTGCAGGAGT+GGG - chr6_1:450943-450962 None:intergenic 40.0%
AGATGCTTAAGATGATGTGC+AGG - chr6_1:450949-450968 None:intergenic 40.0%
ATCTGAGCATCCATAGACAA+TGG - chr6_1:451205-451224 None:intergenic 40.0%
ACAATAGTTCTTGGAGCAGT+TGG + chr6_1:451228-451247 Msa0867520:CDS 40.0%
TTTCCCACATTCCTGTTAGA+AGG - chr6_1:451323-451342 None:intergenic 40.0%
TGTCATATTGTCATCCTGAG+TGG + chr6_1:451362-451381 Msa0867520:intron 40.0%
GACCAAGCTCTCTAATTCTT+GGG - chr6_1:451572-451591 None:intergenic 40.0%
AGACCAAGCTCTCTAATTCT+TGG - chr6_1:451573-451592 None:intergenic 40.0%
ATTCTCTTACTGATGCAACC+CGG + chr6_1:451838-451857 Msa0867520:intron 40.0%
AGAGCCATTAATGATAGTCC+GGG - chr6_1:451859-451878 None:intergenic 40.0%
CATTAGTTAGCTGCACTATC+AGG + chr6_1:452007-452026 Msa0867520:intron 40.0%
!!! AGTTGGTAGGTTTTGGGATA+TGG + chr6_1:452292-452311 Msa0867520:intron 40.0%
CTGAGTATTAGAGTAGCTGA+TGG + chr6_1:452331-452350 Msa0867520:intron 40.0%
TGGTTATCACCAACCATAAG+AGG - chr6_1:452514-452533 None:intergenic 40.0%
ATCTCTCTTTGGTACAAAGG+AGG + chr6_1:452592-452611 Msa0867520:intron 40.0%
TCTCTCTTTGGTACAAAGGA+GGG + chr6_1:452593-452612 Msa0867520:intron 40.0%
TTCAATTTCTCATCCCCGTT+GGG - chr6_1:452718-452737 None:intergenic 40.0%
! ATAGTTTTCTGCATTCGGGA+CGG + chr6_1:452976-452995 Msa0867520:intron 40.0%
! TTTTCCCCGATTCCAAAACA+CGG - chr6_1:453055-453074 None:intergenic 40.0%
!! TTTTGACTGGGTATGGGTTT+GGG - chr6_1:453078-453097 None:intergenic 40.0%
!!! ATTTTGACTGGGTATGGGTT+TGG - chr6_1:453079-453098 None:intergenic 40.0%
AAACCCATACCCAGTCAAAA+TGG + chr6_1:453078-453097 Msa0867520:intron 40.0%
AACCCATACCCAGTCAAAAT+GGG + chr6_1:453079-453098 Msa0867520:intron 40.0%
CGAACCAAACTCAATTTGAC+GGG - chr6_1:453110-453129 None:intergenic 40.0%
CCGAACCAAACTCAATTTGA+CGG - chr6_1:453111-453130 None:intergenic 40.0%
CCGTCAAATTGAGTTTGGTT+CGG + chr6_1:453108-453127 Msa0867520:intron 40.0%
! CGTCAAATTGAGTTTGGTTC+GGG + chr6_1:453109-453128 Msa0867520:intron 40.0%
!! AAATTGAGTTTGGTTCGGGT+GGG + chr6_1:453113-453132 Msa0867520:intron 40.0%
!! GGAAACTGGTAGTTTGTTTG+GGG - chr6_1:453178-453197 None:intergenic 40.0%
!! GTGGAAACTGGTAGTTTGTT+TGG - chr6_1:453180-453199 None:intergenic 40.0%
GTAGGCAAAGTAGTAGAGTA+TGG - chr6_1:453382-453401 None:intergenic 40.0%
GATAGAGAGAGAAAGAAGGT+AGG - chr6_1:453400-453419 None:intergenic 40.0%
GAGAGATAGAGAGAGAAAGA+AGG - chr6_1:453404-453423 None:intergenic 40.0%
TTACCATGGGATTACATGTC+AGG - chr6_1:453579-453598 None:intergenic 40.0%
TGGGGGTAACATGTGTTATA+CGG - chr6_1:453872-453891 None:intergenic 40.0%
TAACACATGTTACCCCCAAT+TGG + chr6_1:453874-453893 Msa0867520:CDS 40.0%
GATTCATTATCTCATCCAGC+TGG + chr6_1:453980-453999 Msa0867520:CDS 40.0%
TTTGACTGCAGATTCCAAAC+TGG + chr6_1:454337-454356 Msa0867520:intron 40.0%
TGTGCTTCATGTGTACTTCA+AGG + chr6_1:454605-454624 Msa0867520:CDS 40.0%
TTCATGTGTACTTCAAGGAC+TGG + chr6_1:454610-454629 Msa0867520:CDS 40.0%
!! TACTTCAAGGACTGGCTATA+TGG + chr6_1:454618-454637 Msa0867520:CDS 40.0%
AGTGCTTATCTTCATGGAGA+TGG + chr6_1:454834-454853 Msa0867520:intron 40.0%
TTGCGAATGTCCTCAGAATT+TGG + chr6_1:455092-455111 Msa0867520:intron 40.0%
GTATAATAGGGGGACCAAAA+TGG - chr6_1:455436-455455 None:intergenic 40.0%
GTTGTATGACAGAAAACGGT+AGG + chr6_1:455645-455664 Msa0867520:intron 40.0%
CCGAGCTGAAAATAACTACA+AGG + chr6_1:455690-455709 Msa0867520:intron 40.0%
TGTTATAAGTTCCGATTGGC+TGG + chr6_1:455770-455789 Msa0867520:intron 40.0%
GAAAGTGAGTGCAGTTACAT+AGG + chr6_1:455824-455843 Msa0867520:intron 40.0%
CTGGAGTTATTATCTGAGCT+TGG + chr6_1:455901-455920 Msa0867520:intron 40.0%
AAGATGGAGAAACTCGATTG+AGG - chr6_1:456073-456092 None:intergenic 40.0%
!! GTCTGTATTAGGCATTGATG+AGG - chr6_1:456135-456154 None:intergenic 40.0%
TCAACTTTACTGTCTGCAAG+CGG + chr6_1:456436-456455 Msa0867520:CDS 40.0%
!! TCTGCAAGCGGATTAATCAT+CGG + chr6_1:456448-456467 Msa0867520:CDS 40.0%
ATTTCGCTTGCCAATTGCAT+CGG + chr6_1:456543-456562 Msa0867520:three_prime_UTR 40.0%
TATCGGATTGCATAAGTAGG+TGG - chr6_1:456611-456630 None:intergenic 40.0%
! TTGGGTTGTGTGGATGATGA+TGG - chr6_1:446041-446060 None:intergenic 45.0%
TGATGTGGCTTGAAGTGGTT+GGG - chr6_1:446059-446078 None:intergenic 45.0%
! TTGGAGAATGGTGATGAGAG+TGG - chr6_1:446136-446155 None:intergenic 45.0%
!!! TGAGTTTTGGGATGGGGATT+AGG - chr6_1:446259-446278 None:intergenic 45.0%
!!! GGAGAAGATGAGTTTTGGGA+TGG - chr6_1:446267-446286 None:intergenic 45.0%
! GGTCGGAGAAGATGAGTTTT+GGG - chr6_1:446271-446290 None:intergenic 45.0%
! GGTTTGTTTGAGTGTGAGGA+GGG - chr6_1:446303-446322 None:intergenic 45.0%
! GGTTGAGATCTGAAGCGAAT+CGG - chr6_1:446372-446391 None:intergenic 45.0%
! GTTTTCATGGTGAATCACGG+AGG - chr6_1:446426-446445 None:intergenic 45.0%
GCAGGATCTTTATTCGAACG+CGG - chr6_1:446530-446549 None:intergenic 45.0%
CAAACATCAGCAACAGAAGC+AGG - chr6_1:446548-446567 None:intergenic 45.0%
CTGCTTCTGTTGCTGATGTT+TGG + chr6_1:446546-446565 Msa0867520:CDS 45.0%
CCATCAAACGCAGAAGTAGA+AGG - chr6_1:446572-446591 None:intergenic 45.0%
CCTTCTACTTCTGCGTTTGA+TGG + chr6_1:446569-446588 Msa0867520:CDS 45.0%
! ACGTCTTCCATCAGAAGTGT+CGG - chr6_1:446685-446704 None:intergenic 45.0%
AAGACGTGTCCAGTGTTATG+CGG + chr6_1:446698-446717 Msa0867520:intron 45.0%
GTGTGTCCAGTGTTATGTGT+CGG + chr6_1:446726-446745 Msa0867520:intron 45.0%
AGCTTATAGCATACTCCCTC+CGG - chr6_1:447443-447462 None:intergenic 45.0%
AGCTTATGCGCAGCAATAGT+CGG + chr6_1:447940-447959 Msa0867520:intron 45.0%
!! GTCTTATCTGCAAAAGCACC+TGG + chr6_1:448004-448023 Msa0867520:CDS 45.0%
GAAGGCGAAGAATCAAAGGT+TGG + chr6_1:448068-448087 Msa0867520:intron 45.0%
GGTTGCTGATATGAATAGCC+GGG + chr6_1:448441-448460 Msa0867520:intron 45.0%
CAAACTGAACTAGGAACCCA+AGG - chr6_1:449097-449116 None:intergenic 45.0%
CTTGGGTTCCTAGTTCAGTT+TGG + chr6_1:449095-449114 Msa0867520:CDS 45.0%
CCTTATCGCCAAACTGAACT+AGG - chr6_1:449106-449125 None:intergenic 45.0%
CCTAGTTCAGTTTGGCGATA+AGG + chr6_1:449103-449122 Msa0867520:CDS 45.0%
TGAACTTGAGTAACAGGGAC+GGG - chr6_1:449197-449216 None:intergenic 45.0%
TTGCAAGCGATTCAGCAACA+TGG - chr6_1:449502-449521 None:intergenic 45.0%
TTTCAACTTGCCGCCTACTT+AGG - chr6_1:449561-449580 None:intergenic 45.0%
! TAAGTAGGCGGCAAGTTGAA+AGG + chr6_1:449560-449579 Msa0867520:intron 45.0%
CTAAGATTGAGCCAAACCAC+CGG + chr6_1:449665-449684 Msa0867520:intron 45.0%
!! ACATGTTGGCTCAGTTGGTA+AGG + chr6_1:450058-450077 Msa0867520:intron 45.0%
!! TTGGCTCAGTTGGTAAGGAA+CGG + chr6_1:450063-450082 Msa0867520:intron 45.0%
! CGAACACACAACCTTTTGAG+GGG - chr6_1:450096-450115 None:intergenic 45.0%
GTACCTTTGTAAGTGCCCTT+TGG + chr6_1:450161-450180 Msa0867520:intron 45.0%
TTACACAGCCACAACGATTC+TGG + chr6_1:450453-450472 Msa0867520:intron 45.0%
TTACACAGCCACAACGATTC+TGG + chr6_1:450453-450472 Msa0867520:intron 45.0%
CTTAAGATGATGTGCAGGAG+TGG - chr6_1:450944-450963 None:intergenic 45.0%
CTCCCAAGAATTAGAGAGCT+TGG + chr6_1:451567-451586 Msa0867520:intron 45.0%
AGGGAGGTCATTCGGTTATT+TGG - chr6_1:451615-451634 None:intergenic 45.0%
GATAGGGAAGTTGTGGCTAA+GGG - chr6_1:451634-451653 None:intergenic 45.0%
AGATAGGGAAGTTGTGGCTA+AGG - chr6_1:451635-451654 None:intergenic 45.0%
! AAAACTGACCGGCAGTTTTG+GGG - chr6_1:451743-451762 None:intergenic 45.0%
! CAAAACTGACCGGCAGTTTT+GGG - chr6_1:451744-451763 None:intergenic 45.0%
CAGACAAGACCAAAACTGAC+CGG - chr6_1:451754-451773 None:intergenic 45.0%
AAGGTCAGTTCCTTTCCGTT+AGG - chr6_1:451807-451826 None:intergenic 45.0%
GCAACCCGGACTATCATTAA+TGG + chr6_1:451852-451871 Msa0867520:intron 45.0%
GAAAACACATTCACGGCAGT+TGG - chr6_1:452470-452489 None:intergenic 45.0%
AGTGAACCAGCAACCTCTTA+TGG + chr6_1:452498-452517 Msa0867520:CDS 45.0%
AACCAGCAACCTCTTATGGT+TGG + chr6_1:452502-452521 Msa0867520:CDS 45.0%
GGATGCTCACCTGCAATTTA+TGG - chr6_1:452534-452553 None:intergenic 45.0%
CTCTCTTTGGTACAAAGGAG+GGG + chr6_1:452594-452613 Msa0867520:intron 45.0%
GTTCAATTTCTCATCCCCGT+TGG - chr6_1:452719-452738 None:intergenic 45.0%
! TAGTTTTCTGCATTCGGGAC+GGG + chr6_1:452977-452996 Msa0867520:intron 45.0%
TTTCCCCGATTCCAAAACAC+GGG - chr6_1:453054-453073 None:intergenic 45.0%
ACCCATACCCAGTCAAAATG+GGG + chr6_1:453080-453099 Msa0867520:intron 45.0%
!!! TCCCCATTTTGACTGGGTAT+GGG - chr6_1:453084-453103 None:intergenic 45.0%
!!! TTCCCCATTTTGACTGGGTA+TGG - chr6_1:453085-453104 None:intergenic 45.0%
!!! GGGTTTTCCCCATTTTGACT+GGG - chr6_1:453090-453109 None:intergenic 45.0%
!! CAAATTGAGTTTGGTTCGGG+TGG + chr6_1:453112-453131 Msa0867520:intron 45.0%
! AGTTTGTTTGGGGTGTAGCT+AGG - chr6_1:453168-453187 None:intergenic 45.0%
CTGCGATGAAATGTGGAAAC+TGG - chr6_1:453192-453211 None:intergenic 45.0%
! AGTAGAGTATGGCATTGGGT+GGG - chr6_1:453371-453390 None:intergenic 45.0%
! TAGTAGAGTATGGCATTGGG+TGG - chr6_1:453372-453391 None:intergenic 45.0%
TCACACCTTCCTTGCTACTA+CGG + chr6_1:453459-453478 Msa0867520:intron 45.0%
TAGAACCGTAGTAGCAAGGA+AGG - chr6_1:453467-453486 None:intergenic 45.0%
ACTCATGTGCTCCTCCAATT+GGG - chr6_1:453891-453910 None:intergenic 45.0%
TCATCCCATCTGTTCACTGT+GGG - chr6_1:453929-453948 None:intergenic 45.0%
TTCATCCCATCTGTTCACTG+TGG - chr6_1:453930-453949 None:intergenic 45.0%
! GTTGTCTTTTGTAGATCCCG+TGG - chr6_1:454376-454395 None:intergenic 45.0%
TCAAGGACTGACTGACTACA+TGG + chr6_1:454979-454998 Msa0867520:intron 45.0%
GCATACAAGCAGCTTCATGT+GGG - chr6_1:455123-455142 None:intergenic 45.0%
TGCATACAAGCAGCTTCATG+TGG - chr6_1:455124-455143 None:intergenic 45.0%
TAATAGGGGGACCAAAATGG+TGG - chr6_1:455433-455452 None:intergenic 45.0%
GACATGGAGCATATGTGAGT+TGG + chr6_1:455509-455528 Msa0867520:intron 45.0%
CATCTCAACTTCCAGCCAAT+CGG - chr6_1:455784-455803 None:intergenic 45.0%
! GATTGGCTGGAAGTTGAGAT+GGG + chr6_1:455783-455802 Msa0867520:intron 45.0%
GGAAAAGAGTGACAGAGAAG+AGG + chr6_1:455845-455864 Msa0867520:intron 45.0%
! CTGAAGTGTCAGTGTTGTAG+AGG - chr6_1:455970-455989 None:intergenic 45.0%
GCTAACGGAGGAGCTTATAA+TGG + chr6_1:456301-456320 Msa0867520:intron 45.0%
TCCTGTGCAGAGTGATCTAT+CGG - chr6_1:456628-456647 None:intergenic 45.0%
ATAGATCACTCTGCACAGGA+TGG + chr6_1:456628-456647 Msa0867520:three_prime_UTR 45.0%
!!! TTTTTTTTTTTTTTTTTGAA+AGG + chr6_1:450003-450022 Msa0867520:intron 5.0%
!!! TTTTTTTTTTTTTTTTGAAA+GGG + chr6_1:450004-450023 Msa0867520:intron 5.0%
!! ATTCATTATATATATATATA+GGG + chr6_1:450680-450699 Msa0867520:intron 5.0%
!!! ATTTTATTATTCTAAATTAA+TGG + chr6_1:456711-456730 Msa0867520:three_prime_UTR 5.0%
! CTTGAAGTGGTTGGGTTGTG+TGG - chr6_1:446051-446070 None:intergenic 50.0%
GTGATGTGGCTTGAAGTGGT+TGG - chr6_1:446060-446079 None:intergenic 50.0%
ATCACCACCACAACCTTCCA+CGG + chr6_1:446075-446094 Msa0867520:five_prime_UTR 50.0%
! ATGGTGATGAGAGTGGAGGA+GGG - chr6_1:446129-446148 None:intergenic 50.0%
! AATGGTGATGAGAGTGGAGG+AGG - chr6_1:446130-446149 None:intergenic 50.0%
! GAGAATGGTGATGAGAGTGG+AGG - chr6_1:446133-446152 None:intergenic 50.0%
! GGGTCGGAGAAGATGAGTTT+TGG - chr6_1:446272-446291 None:intergenic 50.0%
AGTGTGAGGAGGGATTGTGT+GGG - chr6_1:446293-446312 None:intergenic 50.0%
! GGGTTTGTTTGAGTGTGAGG+AGG - chr6_1:446304-446323 None:intergenic 50.0%
! GGAGGGTTTGTTTGAGTGTG+AGG - chr6_1:446307-446326 None:intergenic 50.0%
AAGCGAATCGGAGATTGTGG+CGG - chr6_1:446360-446379 None:intergenic 50.0%
CTGAAGCGAATCGGAGATTG+TGG - chr6_1:446363-446382 None:intergenic 50.0%
!! TCACGGAGGAGAGAGTATCA+AGG - chr6_1:446412-446431 None:intergenic 50.0%
!! CAACGACGACGTCGTTTTCA+TGG - chr6_1:446439-446458 None:intergenic 50.0%
GAAAACGACGTCGTCGTTGA+TGG + chr6_1:446440-446459 Msa0867520:CDS 50.0%
TGTGATGCCGACACTTCTGA+TGG + chr6_1:446675-446694 Msa0867520:intron 50.0%
ACACGTCTTCCGCATAACAC+TGG - chr6_1:446710-446729 None:intergenic 50.0%
CTGACACCGACACATAACAC+TGG - chr6_1:446735-446754 None:intergenic 50.0%
CGTGGACGCTTCAGTTTCAT+AGG + chr6_1:446826-446845 Msa0867520:intron 50.0%
TATCTCTTCTAGCCGAGCCA+GGG + chr6_1:448036-448055 Msa0867520:CDS 50.0%
ATGTCTGTGCTGGAGAGTAG+AGG + chr6_1:448420-448439 Msa0867520:intron 50.0%
GCTGATATGAATAGCCGGGT+TGG + chr6_1:448445-448464 Msa0867520:intron 50.0%
CAAAGTGGCAACTACCAACC+CGG - chr6_1:448462-448481 None:intergenic 50.0%
CAGTTTGGCGATAAGGCTGA+AGG + chr6_1:449110-449129 Msa0867520:CDS 50.0%
AACATCTTGATCAGCGGCAC+TGG - chr6_1:449297-449316 None:intergenic 50.0%
GACTGATGCATGCTCTGTCT+CGG + chr6_1:449322-449341 Msa0867520:CDS 50.0%
CCAACTGAGCCAACATGTGT+TGG - chr6_1:450056-450075 None:intergenic 50.0%
!! CCAACACATGTTGGCTCAGT+TGG + chr6_1:450053-450072 Msa0867520:intron 50.0%
!! TGGCTCAGTTGGTAAGGAAC+GGG + chr6_1:450064-450083 Msa0867520:intron 50.0%
!! CACAACCTTTTGAGGGGAAG+TGG - chr6_1:450090-450109 None:intergenic 50.0%
! AGTTTAGGTGGATTCGGCTC+CGG - chr6_1:450212-450231 None:intergenic 50.0%
GGGCAGTAAAAGGTCTAGGT+GGG - chr6_1:450338-450357 None:intergenic 50.0%
AGGGCAGTAAAAGGTCTAGG+TGG - chr6_1:450339-450358 None:intergenic 50.0%
GTGGCCAAAAGGGCAGTAAA+AGG - chr6_1:450348-450367 None:intergenic 50.0%
AGTTCTTGGAGCAGTTGGCA+AGG + chr6_1:451233-451252 Msa0867520:CDS 50.0%
TGTGGCTAAGGGAGGTCATT+CGG - chr6_1:451623-451642 None:intergenic 50.0%
CATAACTGCCCCAAAACTGC+CGG + chr6_1:451732-451751 Msa0867520:intron 50.0%
! CCAAAACTGACCGGCAGTTT+TGG - chr6_1:451745-451764 None:intergenic 50.0%
! CCAAAACTGCCGGTCAGTTT+TGG + chr6_1:451742-451761 Msa0867520:intron 50.0%
CACCAACCATAAGAGGTTGC+TGG - chr6_1:452507-452526 None:intergenic 50.0%
CTACACCTAGGCATGGCAAT+GGG + chr6_1:452617-452636 Msa0867520:intron 50.0%
TACACCTAGGCATGGCAATG+GGG + chr6_1:452618-452637 Msa0867520:intron 50.0%
ATGACAATCGGGTATGGGGA+CGG - chr6_1:452670-452689 None:intergenic 50.0%
TTGGGTATGGGTAGGGTAAC+GGG - chr6_1:452700-452719 None:intergenic 50.0%
GTTGGGTATGGGTAGGGTAA+CGG - chr6_1:452701-452720 None:intergenic 50.0%
GTTACCCTACCCATACCCAA+CGG + chr6_1:452700-452719 Msa0867520:intron 50.0%
TTACCCTACCCATACCCAAC+GGG + chr6_1:452701-452720 Msa0867520:intron 50.0%
TTCTCATCCCCGTTGGGTAT+GGG - chr6_1:452712-452731 None:intergenic 50.0%
TTTCTCATCCCCGTTGGGTA+TGG - chr6_1:452713-452732 None:intergenic 50.0%
TATTCAATGTGGGGATGGGG+CGG - chr6_1:452774-452793 None:intergenic 50.0%
ACGGGTTTGGGTATGGGTTT+GGG + chr6_1:452995-453014 Msa0867520:intron 50.0%
! TTTGGGTATGGGTTTGGGGT+GGG + chr6_1:453000-453019 Msa0867520:intron 50.0%
!! GGGACGGATAACGGGTATAT+AGG - chr6_1:453028-453047 None:intergenic 50.0%
CGATTCCAAAACACGGGTGT+GGG - chr6_1:453048-453067 None:intergenic 50.0%
!!! CCACACCCGTGTTTTGGAAT+CGG + chr6_1:453046-453065 Msa0867520:intron 50.0%
!!! CACACCCGTGTTTTGGAATC+GGG + chr6_1:453047-453066 Msa0867520:intron 50.0%
!!! ACACCCGTGTTTTGGAATCG+GGG + chr6_1:453048-453067 Msa0867520:intron 50.0%
!! CGGGTTTTCCCCATTTTGAC+TGG - chr6_1:453091-453110 None:intergenic 50.0%
GGCAACAAAACCCATATCCG+TGG - chr6_1:453142-453161 None:intergenic 50.0%
! GTAGTAGCAAGGAAGGTGTG+AGG - chr6_1:453460-453479 None:intergenic 50.0%
TGGGTAGAACCGTAGTAGCA+AGG - chr6_1:453471-453490 None:intergenic 50.0%
AGTTGTAATCATCCCGCACG+TGG - chr6_1:453497-453516 None:intergenic 50.0%
AGGCCTGACATGTAATCCCA+TGG + chr6_1:453573-453592 Msa0867520:intron 50.0%
CACATGTTACCCCCAATTGG+AGG + chr6_1:453877-453896 Msa0867520:CDS 50.0%
TCATGTGCTCCTCCAATTGG+GGG - chr6_1:453889-453908 None:intergenic 50.0%
CTCATGTGCTCCTCCAATTG+GGG - chr6_1:453890-453909 None:intergenic 50.0%
CACTCATGTGCTCCTCCAAT+TGG - chr6_1:453892-453911 None:intergenic 50.0%
! GAGGAGCACATGAGTGAAGT+TGG + chr6_1:453896-453915 Msa0867520:CDS 50.0%
TTCTGCCCACAGTGAACAGA+TGG + chr6_1:453921-453940 Msa0867520:CDS 50.0%
TCTGCCCACAGTGAACAGAT+GGG + chr6_1:453922-453941 Msa0867520:CDS 50.0%
GAACAGATGGGATGAAGCTC+TGG + chr6_1:453934-453953 Msa0867520:CDS 50.0%
TGAACATCAGAGACACCAGC+TGG - chr6_1:453998-454017 None:intergenic 50.0%
TTGTGAACTGATCAGGGTCC+AGG - chr6_1:454039-454058 None:intergenic 50.0%
GTGGGTCACTCCAAATTCTG+AGG - chr6_1:455105-455124 None:intergenic 50.0%
!! GGTGATAATTGGTACCGGTG+AGG - chr6_1:455263-455282 None:intergenic 50.0%
CACGCGGTGATAATTGGTAC+CGG - chr6_1:455268-455287 None:intergenic 50.0%
GGAGAACACGCGGTGATAAT+TGG - chr6_1:455274-455293 None:intergenic 50.0%
! CGATTGGCTGGAAGTTGAGA+TGG + chr6_1:455782-455801 Msa0867520:intron 50.0%
AAGCAGCACATTGCTAACGG+AGG + chr6_1:456289-456308 Msa0867520:intron 50.0%
!! AGCGGATTAATCATCGGCAG+AGG + chr6_1:456454-456473 Msa0867520:CDS 50.0%
ACCTGTGTGACCGATGCAAT+TGG - chr6_1:456556-456575 None:intergenic 50.0%
TCCGATAGATCACTCTGCAC+AGG + chr6_1:456624-456643 Msa0867520:three_prime_UTR 50.0%
! GGTGGTGATGTGGCTTGAAG+TGG - chr6_1:446064-446083 None:intergenic 55.0%
! GGAAGGTTGTGGTGGTGATG+TGG - chr6_1:446074-446093 None:intergenic 55.0%
TGATGAGAGTGGAGGAGGGA+GGG - chr6_1:446125-446144 None:intergenic 55.0%
GTGTGAGGAGGGATTGTGTG+GGG - chr6_1:446292-446311 None:intergenic 55.0%
GAGTGTGAGGAGGGATTGTG+TGG - chr6_1:446294-446313 None:intergenic 55.0%
! AGATTGTGGCGGAGGAGATG+AGG - chr6_1:446349-446368 None:intergenic 55.0%
GCTTCAGATCTCAACCGAGC+AGG + chr6_1:446376-446395 Msa0867520:CDS 55.0%
AAGGAGGAGTTGAGCCTGCT+CGG - chr6_1:446393-446412 None:intergenic 55.0%
!! CGGAGGAGAGAGTATCAAGG+AGG - chr6_1:446409-446428 None:intergenic 55.0%
CTCTGCTCTCTCTCCTCTTC+AGG + chr6_1:446598-446617 Msa0867520:CDS 55.0%
! GCAAAAGCACGCACCTGAAG+AGG - chr6_1:446614-446633 None:intergenic 55.0%
! TCGGCGTTTTATGCCATCGC+AGG + chr6_1:447959-447978 Msa0867520:CDS 55.0%
CTATCTCTTCTAGCCGAGCC+AGG + chr6_1:448035-448054 Msa0867520:CDS 55.0%
ATCTCTTCTAGCCGAGCCAG+GGG + chr6_1:448037-448056 Msa0867520:CDS 55.0%
GGGGGAAGGCGAAGAATCAA+AGG + chr6_1:448064-448083 Msa0867520:CDS 55.0%
CACCAACACCGTCCTCACAT+CGG - chr6_1:450129-450148 None:intergenic 55.0%
!! GATGTGAGGACGGTGTTGGT+GGG + chr6_1:450128-450147 Msa0867520:intron 55.0%
!! GGCCCAAAGGGCACTTACAA+AGG - chr6_1:450167-450186 None:intergenic 55.0%
TTGTAAGTGCCCTTTGGGCC+CGG + chr6_1:450167-450186 Msa0867520:intron 55.0%
AGGGAAGTTGTGGCTAAGGG+AGG - chr6_1:451631-451650 None:intergenic 55.0%
ACAAAGGAGGGGCTACACCT+AGG + chr6_1:452605-452624 Msa0867520:intron 55.0%
GCTACACCTAGGCATGGCAA+TGG + chr6_1:452616-452635 Msa0867520:intron 55.0%
TGACAATCGGGTATGGGGAC+GGG - chr6_1:452669-452688 None:intergenic 55.0%
TACCCTACCCATACCCAACG+GGG + chr6_1:452702-452721 Msa0867520:intron 55.0%
ATCCCCGTTGGGTATGGGTA+GGG - chr6_1:452707-452726 None:intergenic 55.0%
ATTCAATGTGGGGATGGGGC+GGG - chr6_1:452773-452792 None:intergenic 55.0%
! TTCTGCATTCGGGACGGGTT+TGG + chr6_1:452982-453001 Msa0867520:intron 55.0%
! TCTGCATTCGGGACGGGTTT+GGG + chr6_1:452983-453002 Msa0867520:intron 55.0%
! ATTCGGGACGGGTTTGGGTA+TGG + chr6_1:452988-453007 Msa0867520:intron 55.0%
! TTCGGGACGGGTTTGGGTAT+GGG + chr6_1:452989-453008 Msa0867520:intron 55.0%
! GACGGGTTTGGGTATGGGTT+TGG + chr6_1:452994-453013 Msa0867520:intron 55.0%
CGGGTTTGGGTATGGGTTTG+GGG + chr6_1:452996-453015 Msa0867520:intron 55.0%
GTTTGGGTATGGGTTTGGGG+TGG + chr6_1:452999-453018 Msa0867520:intron 55.0%
TCCAAAACACGGGTGTGGGA+CGG - chr6_1:453044-453063 None:intergenic 55.0%
CCGATTCCAAAACACGGGTG+TGG - chr6_1:453049-453068 None:intergenic 55.0%
!! TTGGTTCGGGTGGGTAACCA+CGG + chr6_1:453122-453141 Msa0867520:intron 55.0%
GGGTGGGTAACCACGGATAT+GGG + chr6_1:453129-453148 Msa0867520:intron 55.0%
! GTTTGGGGTGTAGCTAGGCA+TGG - chr6_1:453163-453182 None:intergenic 55.0%
! GAGTATGGCATTGGGTGGGT+TGG - chr6_1:453367-453386 None:intergenic 55.0%
! AGCAAGGAAGGTGTGAGGTG+TGG - chr6_1:453455-453474 None:intergenic 55.0%
TGTAATCATCCCGCACGTGG+TGG - chr6_1:453494-453513 None:intergenic 55.0%
CTGACCCTACGAAGCATACG+AGG + chr6_1:453553-453572 Msa0867520:intron 55.0%
CAGGCCTCGTATGCTTCGTA+GGG - chr6_1:453560-453579 None:intergenic 55.0%
TCAGGCCTCGTATGCTTCGT+AGG - chr6_1:453561-453580 None:intergenic 55.0%
!! CAGATTCCAAACTGGCTCGC+AGG + chr6_1:454345-454364 Msa0867520:intron 55.0%
TGGGACGCCGCATATGAATC+TGG - chr6_1:454411-454430 None:intergenic 55.0%
! GCCAATTGCATCGGTCACAC+AGG + chr6_1:456552-456571 Msa0867520:three_prime_UTR 55.0%
TGAGACGCCGTGGAAGGTTG+TGG - chr6_1:446085-446104 None:intergenic 60.0%
GTGATGAGAGTGGAGGAGGG+AGG - chr6_1:446126-446145 None:intergenic 60.0%
! GTGGGAGCGTGTGATGTGGA+AGG - chr6_1:446200-446219 None:intergenic 60.0%
! CATGGTGGGAGCGTGTGATG+TGG - chr6_1:446204-446223 None:intergenic 60.0%
GGGATTAGGCCGTGCTCGAA+TGG - chr6_1:446245-446264 None:intergenic 60.0%
GAGGAGGGATTGTGTGGGGT+CGG - chr6_1:446288-446307 None:intergenic 60.0%
GTTGGAGGAGGAAGCGAGGA+GGG - chr6_1:446324-446343 None:intergenic 60.0%
GGAGATGAGGTGGTTGGAGG+AGG - chr6_1:446336-446355 None:intergenic 60.0%
GGAGGAGATGAGGTGGTTGG+AGG - chr6_1:446339-446358 None:intergenic 60.0%
! TTGTGGCGGAGGAGATGAGG+TGG - chr6_1:446346-446365 None:intergenic 60.0%
CGAATCGGAGATTGTGGCGG+AGG - chr6_1:446357-446376 None:intergenic 60.0%
GCCATCGCAGGCTGATGAAG+AGG + chr6_1:447971-447990 Msa0867520:CDS 60.0%
GCCTCTTCATCAGCCTGCGA+TGG - chr6_1:447975-447994 None:intergenic 60.0%
TTCGGATCCTGAGATGCCCG+CGG + chr6_1:449169-449188 Msa0867520:CDS 60.0%
AGTAACAGGGACGGGAACCG+CGG - chr6_1:449189-449208 None:intergenic 60.0%
!! TCTTGATCAGCGGCACTGGC+TGG - chr6_1:449293-449312 None:intergenic 60.0%
ACGGGCCACTTCCCCTCAAA+AGG + chr6_1:450082-450101 Msa0867520:intron 60.0%
CGATTCTCGCTGCCGATGTG+AGG + chr6_1:450114-450133 Msa0867520:intron 60.0%
TCTCGCTGCCGATGTGAGGA+CGG + chr6_1:450118-450137 Msa0867520:intron 60.0%
TGCCGATGTGAGGACGGTGT+TGG + chr6_1:450124-450143 Msa0867520:intron 60.0%
! CGATGTGAGGACGGTGTTGG+TGG + chr6_1:450127-450146 Msa0867520:intron 60.0%
ACCTAGGCATGGCAATGGGG+CGG + chr6_1:452621-452640 Msa0867520:intron 60.0%
GACAATCGGGTATGGGGACG+GGG - chr6_1:452668-452687 None:intergenic 60.0%
CATCCCCGTTGGGTATGGGT+AGG - chr6_1:452708-452727 None:intergenic 60.0%
AACCTCAACCCCGTCCCCAA+CGG + chr6_1:452736-452755 Msa0867520:intron 60.0%
ATACCCGAACCCGTTGGGGA+CGG - chr6_1:452749-452768 None:intergenic 60.0%
TTCAATGTGGGGATGGGGCG+GGG - chr6_1:452772-452791 None:intergenic 60.0%
ACGGGTGTGGGACGGATAAC+GGG - chr6_1:453036-453055 None:intergenic 60.0%
CACGGGTGTGGGACGGATAA+CGG - chr6_1:453037-453056 None:intergenic 60.0%
! TCCGTCCCACACCCGTGTTT+TGG + chr6_1:453040-453059 Msa0867520:intron 60.0%
CGGGTGGGTAACCACGGATA+TGG + chr6_1:453128-453147 Msa0867520:intron 60.0%
GTTCTACCCACCACCACGTG+CGG + chr6_1:453481-453500 Msa0867520:intron 60.0%
TTCTACCCACCACCACGTGC+GGG + chr6_1:453482-453501 Msa0867520:intron 60.0%
ATCATCCCGCACGTGGTGGT+GGG - chr6_1:453490-453509 None:intergenic 60.0%
AATCATCCCGCACGTGGTGG+TGG - chr6_1:453491-453510 None:intergenic 60.0%
AGCTGAGTCTGCTACACGCC+TGG + chr6_1:454018-454037 Msa0867520:CDS 60.0%
GACTCTCCTGCGAGCCAGTT+TGG - chr6_1:454354-454373 None:intergenic 60.0%
CAAATGGGTCTCGGCCTCAC+CGG + chr6_1:455246-455265 Msa0867520:intron 60.0%
GACGCCGTGGAAGGTTGTGG+TGG - chr6_1:446082-446101 None:intergenic 65.0%
GTTTGCGGTGTGAGACGCCG+TGG - chr6_1:446095-446114 None:intergenic 65.0%
! AGGGAGGGAGGGTGGGTTTG+CGG - chr6_1:446110-446129 None:intergenic 65.0%
GAGAGTGGAGGAGGGAGGGA+GGG - chr6_1:446121-446140 None:intergenic 65.0%
TGAGAGTGGAGGAGGGAGGG+AGG - chr6_1:446122-446141 None:intergenic 65.0%
CGGCGAGGGTGGATCATGGT+GGG - chr6_1:446218-446237 None:intergenic 65.0%
TTCGCGGCGAGGGTGGATCA+TGG - chr6_1:446222-446241 None:intergenic 65.0%
GCTCGAATGGTTCGCGGCGA+GGG - chr6_1:446232-446251 None:intergenic 65.0%
TGCTCGAATGGTTCGCGGCG+AGG - chr6_1:446233-446252 None:intergenic 65.0%
CGCCGCGAACCATTCGAGCA+CGG + chr6_1:446233-446252 Msa0867520:CDS 65.0%
GGCCGTGCTCGAATGGTTCG+CGG - chr6_1:446238-446257 None:intergenic 65.0%
GGTTGGAGGAGGAAGCGAGG+AGG - chr6_1:446325-446344 None:intergenic 65.0%
GGTGGTTGGAGGAGGAAGCG+AGG - chr6_1:446328-446347 None:intergenic 65.0%
GGCGGAGGAGATGAGGTGGT+TGG - chr6_1:446342-446361 None:intergenic 65.0%
TCTTCTAGCCGAGCCAGGGG+AGG + chr6_1:448040-448059 Msa0867520:CDS 65.0%
GTAACAGGGACGGGAACCGC+GGG - chr6_1:449188-449207 None:intergenic 65.0%
TAAGTGCCCTTTGGGCCCGG+AGG + chr6_1:450170-450189 Msa0867520:intron 65.0%
TTCGGCTCCGGTCACCACCA+GGG - chr6_1:450200-450219 None:intergenic 65.0%
ATTCGGCTCCGGTCACCACC+AGG - chr6_1:450201-450220 None:intergenic 65.0%
GGAGGGGCTACACCTAGGCA+TGG + chr6_1:452610-452629 Msa0867520:intron 65.0%
CCTAGGCATGGCAATGGGGC+GGG + chr6_1:452622-452641 Msa0867520:intron 65.0%
CTAGGCATGGCAATGGGGCG+GGG + chr6_1:452623-452642 Msa0867520:intron 65.0%
ATCGGGTATGGGGACGGGGA+AGG - chr6_1:452664-452683 None:intergenic 65.0%
ACCTCAACCCCGTCCCCAAC+GGG + chr6_1:452737-452756 Msa0867520:intron 65.0%
! AACCCCGTCCCCAACGGGTT+CGG + chr6_1:452742-452761 Msa0867520:intron 65.0%
TACCCGAACCCGTTGGGGAC+GGG - chr6_1:452748-452767 None:intergenic 65.0%
GGGGATACCCGAACCCGTTG+GGG - chr6_1:452753-452772 None:intergenic 65.0%
CGGGGATACCCGAACCCGTT+GGG - chr6_1:452754-452773 None:intergenic 65.0%
! CTGGCTCGCAGGAGAGTCCA+CGG + chr6_1:454356-454375 Msa0867520:CDS 65.0%
TGGCTCGCAGGAGAGTCCAC+GGG + chr6_1:454357-454376 Msa0867520:CDS 65.0%
GCGGTGTGAGACGCCGTGGA+AGG - chr6_1:446091-446110 None:intergenic 70.0%
GTGGAGGAGGGAGGGAGGGT+GGG - chr6_1:446117-446136 None:intergenic 70.0%
AGTGGAGGAGGGAGGGAGGG+TGG - chr6_1:446118-446137 None:intergenic 70.0%
GCGGCGAGGGTGGATCATGG+TGG - chr6_1:446219-446238 None:intergenic 70.0%
CGAATGGTTCGCGGCGAGGG+TGG - chr6_1:446229-446248 None:intergenic 70.0%
TCTAGCCGAGCCAGGGGAGG+AGG + chr6_1:448043-448062 Msa0867520:CDS 70.0%
CTAGCCGAGCCAGGGGAGGA+GGG + chr6_1:448044-448063 Msa0867520:CDS 70.0%
TAGCCGAGCCAGGGGAGGAG+GGG + chr6_1:448045-448064 Msa0867520:CDS 70.0%
TTCCCCCTCCTCCCCTGGCT+CGG - chr6_1:448051-448070 None:intergenic 70.0%
ACGGGAACCGCGGGCATCTC+AGG - chr6_1:449179-449198 None:intergenic 70.0%
TCACCACCAGGGCAGGCCTC+CGG - chr6_1:450189-450208 None:intergenic 70.0%
! AGGCCTGCCCTGGTGGTGAC+CGG + chr6_1:450190-450209 Msa0867520:intron 70.0%
CCCGCCCCATTGCCATGCCT+AGG - chr6_1:452625-452644 None:intergenic 70.0%
GCATGGCAATGGGGCGGGGT+GGG + chr6_1:452627-452646 Msa0867520:intron 70.0%
CATGGCAATGGGGCGGGGTG+GGG + chr6_1:452628-452647 Msa0867520:intron 70.0%
ACCCGTTGGGGACGGGGTTG+AGG - chr6_1:452741-452760 None:intergenic 70.0%
! ACCCCGTCCCCAACGGGTTC+GGG + chr6_1:452743-452762 Msa0867520:intron 70.0%
ACCCGAACCCGTTGGGGACG+GGG - chr6_1:452747-452766 None:intergenic 70.0%
GCGGGGATACCCGAACCCGT+TGG - chr6_1:452755-452774 None:intergenic 70.0%
AGCCGAGCCAGGGGAGGAGG+GGG + chr6_1:448046-448065 Msa0867520:CDS 75.0%
GAGCCAGGGGAGGAGGGGGA+AGG + chr6_1:448050-448069 Msa0867520:CDS 75.0%
TCGCCTTCCCCCTCCTCCCC+TGG - chr6_1:448056-448075 None:intergenic 75.0%
GGCAGGCCTCCGGGCCCAAA+GGG - chr6_1:450179-450198 None:intergenic 75.0%
CACCACCAGGGCAGGCCTCC+GGG - chr6_1:450188-450207 None:intergenic 75.0%
GCTCCGGTCACCACCAGGGC+AGG - chr6_1:450196-450215 None:intergenic 75.0%
GGCATGGCAATGGGGCGGGG+TGG + chr6_1:452626-452645 Msa0867520:intron 75.0%
GCAATGGGGCGGGGTGGGGA+CGG + chr6_1:452632-452651 Msa0867520:intron 75.0%
CAATGGGGCGGGGTGGGGAC+GGG + chr6_1:452633-452652 Msa0867520:intron 75.0%
! GGGCAGGCCTCCGGGCCCAA+AGG - chr6_1:450180-450199 None:intergenic 80.0%
! TTGGGCCCGGAGGCCTGCCC+TGG + chr6_1:450180-450199 Msa0867520:intron 80.0%
! GGCCCGGAGGCCTGCCCTGG+TGG + chr6_1:450183-450202 Msa0867520:intron 85.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 445994 456834 445994 ID=Msa0867520;Name=Msa0867520
chr6_1 mRNA 445994 456834 445994 ID=Msa0867520-mRNA-1;Parent=Msa0867520;Name=Msa0867520-mRNA-1;_AED=0.06;_eAED=0.06;_QI=185|0.87|0.88|1|1|1|9|319|593
chr6_1 exon 445994 446619 445994 ID=Msa0867520-mRNA-1:exon:160;Parent=Msa0867520-mRNA-1
chr6_1 exon 447942 448085 447942 ID=Msa0867520-mRNA-1:exon:161;Parent=Msa0867520-mRNA-1
chr6_1 exon 449068 449445 449068 ID=Msa0867520-mRNA-1:exon:162;Parent=Msa0867520-mRNA-1
chr6_1 exon 451150 451254 451150 ID=Msa0867520-mRNA-1:exon:163;Parent=Msa0867520-mRNA-1
chr6_1 exon 452403 452543 452403 ID=Msa0867520-mRNA-1:exon:164;Parent=Msa0867520-mRNA-1
chr6_1 exon 453863 454066 453863 ID=Msa0867520-mRNA-1:exon:165;Parent=Msa0867520-mRNA-1
chr6_1 exon 454348 454440 454348 ID=Msa0867520-mRNA-1:exon:166;Parent=Msa0867520-mRNA-1
chr6_1 exon 454528 454707 454528 ID=Msa0867520-mRNA-1:exon:167;Parent=Msa0867520-mRNA-1
chr6_1 exon 456420 456834 456420 ID=Msa0867520-mRNA-1:exon:168;Parent=Msa0867520-mRNA-1
chr6_1 five_prime_UTR 445994 446178 445994 ID=Msa0867520-mRNA-1:five_prime_utr;Parent=Msa0867520-mRNA-1
chr6_1 CDS 446179 446619 446179 ID=Msa0867520-mRNA-1:cds;Parent=Msa0867520-mRNA-1
chr6_1 CDS 447942 448085 447942 ID=Msa0867520-mRNA-1:cds;Parent=Msa0867520-mRNA-1
chr6_1 CDS 449068 449445 449068 ID=Msa0867520-mRNA-1:cds;Parent=Msa0867520-mRNA-1
chr6_1 CDS 451150 451254 451150 ID=Msa0867520-mRNA-1:cds;Parent=Msa0867520-mRNA-1
chr6_1 CDS 452403 452543 452403 ID=Msa0867520-mRNA-1:cds;Parent=Msa0867520-mRNA-1
chr6_1 CDS 453863 454066 453863 ID=Msa0867520-mRNA-1:cds;Parent=Msa0867520-mRNA-1
chr6_1 CDS 454348 454440 454348 ID=Msa0867520-mRNA-1:cds;Parent=Msa0867520-mRNA-1
chr6_1 CDS 454528 454707 454528 ID=Msa0867520-mRNA-1:cds;Parent=Msa0867520-mRNA-1
chr6_1 CDS 456420 456515 456420 ID=Msa0867520-mRNA-1:cds;Parent=Msa0867520-mRNA-1
chr6_1 three_prime_UTR 456516 456834 456516 ID=Msa0867520-mRNA-1:three_prime_utr;Parent=Msa0867520-mRNA-1
Gene Sequence

>Msa0867520

ATGACAGAACCAATAGAACCTTCCACATCACACGCTCCCACCATGATCCACCCTCGCCGCGAACCATTCGAGCACGGCCTAATCCCCATCCCAAAACTCATCTTCTCCGACCCCACACAATCCCTCCTCACACTCAAACAAACCCTCCTCGCTTCCTCCTCCAACCACCTCATCTCCTCCGCCACAATCTCCGATTCGCTTCAGATCTCAACCGAGCAGGCTCAACTCCTCCTTGATACTCTCTCCTCCGTGATTCACCATGAAAACGACGTCGTCGTTGATGGTGCTGAATGTGATGTTTTTGATCTGATTCTGTTGCTTTATATTCAATCGTATAAAAAGTTGCTTCCGCGTTCGAATAAAGATCCTGCTTCTGTTGCTGATGTTTGGCCTTCTACTTCTGCGTTTGATGGTTACTTCTCTGCTCTCTCTCCTCTTCAGCTTATGCGCAGCAATAGTCGGCGTTTTATGCCATCGCAGGCTGATGAAGAGGCACATCAGTTGTCTTATCTGCAAAAGCACCTGGCTAACATTCTATCTCTTCTAGCCGAGCCAGGGGAGGAGGGGGAAGGCGAAGAATCAAAGGTTTTAACTATGGATAGATTTGAGCACCTTGGGTTCCTAGTTCAGTTTGGCGATAAGGCTGAAGGAAATCGTTTGAGTCAATCTTCTCCTTTCTTTGCAAATTCGGATCCTGAGATGCCCGCGGTTCCCGTCCCTGTTACTCAAGTTCATGACTGGCTTATGCAAAATATATCTTCTGCTTTGGAACATATTTCTGAAAGGACTTCTGCTAAGGAAAATGGGCCAGCCAGTGCCGCTGATCAAGATGTTGCTATGACTGATGCATGCTCTGTCTCGGTTAAGTTGTCATCAAGTACCAGGGATTCATGTTCCATTGAAGGGATCACTAAATCTTCTTATGTGAAGCATGCATCTGACATAAAAGGTTCCTCTGTTAAGGTTCTAAACTGCCAAGAGTCTACCATCTATATCTTAGCACCTTTAAGATATGCCATTGTCTATGGATGCTCAGATGCTACAATAGTTCTTGGAGCAGTTGGCAAGGCTGTGAGAGTAGAACACTGTGAAAGAGTTCATGTGATTGTGGCCTCAAAACGTATTTGTATTGCCAACTGCCGTGAATGTGTTTTCTTTTTAGGAGTGAACCAGCAACCTCTTATGGTTGGTGATAACCATAAATTGCAGGTTGCACCGTATAACACATGTTACCCCCAATTGGAGGAGCACATGAGTGAAGTTGGAATTCTGCCCACAGTGAACAGATGGGATGAAGCTCTGGCTTTGAGCATGCTTGATCCTCATGATTCATTATCTCATCCAGCTGGTGTCTCTGATGTTCAAGCTGAGTCTGCTACACGCCTGGACCCTGATCAGTTCACAAATTTTGTGATTCCAAACTGGCTCGCAGGAGAGTCCACGGGATCTACAAAAGACAACCCATTTGCATTACCAGATTCATATGCGGCGTCCCAACATAAAAATCAAAATAATTTAGGAGAGATAAGGAAACTTATACACGAAGCTTCTTTAGAAGAGAGTCGTAAACAAGAATTATCGTCTGTGCTTCATGTGTACTTCAAGGACTGGCTATATGGTAACTTTCATTCCCTTGCTTTCATGTCTTATACTCTCCGTCTTTTGCACATACATAAAGATAAAATGCTTCAGGGAATATTCGTCAACTTTACTGTCTGCAAGCGGATTAATCATCGGCAGAGGATATGCTATGACACACTTGATGACATTAAAGAGCGATAG
Protein sequence

>Msa0867520

MTEPIEPSTSHAPTMIHPRREPFEHGLIPIPKLIFSDPTQSLLTLKQTLLASSSNHLISSATISDSLQISTEQAQLLLDTLSSVIHHENDVVVDGAECDVFDLILLLYIQSYKKLLPRSNKDPASVADVWPSTSAFDGYFSALSPLQLMRSNSRRFMPSQADEEAHQLSYLQKHLANILSLLAEPGEEGEGEESKVLTMDRFEHLGFLVQFGDKAEGNRLSQSSPFFANSDPEMPAVPVPVTQVHDWLMQNISSALEHISERTSAKENGPASAADQDVAMTDACSVSVKLSSSTRDSCSIEGITKSSYVKHASDIKGSSVKVLNCQESTIYILAPLRYAIVYGCSDATIVLGAVGKAVRVEHCERVHVIVASKRICIANCRECVFFLGVNQQPLMVGDNHKLQVAPYNTCYPQLEEHMSEVGILPTVNRWDEALALSMLDPHDSLSHPAGVSDVQAESATRLDPDQFTNFVIPNWLAGESTGSTKDNPFALPDSYAASQHKNQNNLGEIRKLIHEASLEESRKQELSSVLHVYFKDWLYGNFHSLAFMSYTLRLLHIHKDKMLQGIFVNFTVCKRINHRQRICYDTLDDIKER*