Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1464150 | XP_003591515.1 | 93.208 | 530 | 15 | 1 | 1 | 509 | 1 | 530 | 0.0 | 1002 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1464150 | sp|O22252|MHX_ARATH | 67.235 | 528 | 143 | 5 | 9 | 509 | 15 | 539 | 0.0 | 721 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1464150 | G7IF47 | 93.208 | 530 | 15 | 1 | 1 | 509 | 1 | 530 | 0.0 | 1002 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1379740 | Msa1464150 | 0.922265 | 1.230840e-88 | -8.615850e-47 |
| Msa0128850 | Msa1464150 | 0.804725 | 1.881997e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1464150 | MtrunA17_Chr1g0195461 | 93.208 | 530 | 15 | 1 | 1 | 509 | 1 | 530 | 0.0 | 1002 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1464150 | AT2G47600.1 | 67.235 | 528 | 143 | 5 | 9 | 509 | 15 | 539 | 0.0 | 721 |
Find 150 sgRNAs with CRISPR-Local
Find 442 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACATAACTGATCTGAAATTT+TGG | 0.162293 | tig0043929:-7300 | Msa1464150:five_prime_UTR |
| ATACATATTTGCTTACTATT+TGG | 0.181267 | tig0043929:-4760 | Msa1464150:CDS |
| ACTTTGGAAACTATTGTTTA+TGG | 0.190902 | tig0043929:-919 | Msa1464150:three_prime_UTR |
| GGTCTGTATAATACAAATTA+AGG | 0.196530 | tig0043929:+1171 | Msa1464150:intergenic |
| CTATCTTCTCTTAAGGTTTC+CGG | 0.198106 | tig0043929:-1231 | Msa1464150:CDS |
| ATCCCGGTTCTTTCAATCTA+TGG | 0.213459 | tig0043929:-7074 | Msa1464150:CDS |
| GTATGTAATACAATAAAATA+AGG | 0.265963 | tig0043929:+1026 | Msa1464150:intergenic |
| TTATTAAACATGAGAAAGTT+TGG | 0.284616 | tig0043929:-6991 | Msa1464150:CDS |
| GCAATGACGGTGTTTGTTGC+TGG | 0.288678 | tig0043929:+7979 | Msa1464150:intergenic |
| TATTGCAGATATTAGTCTTT+TGG | 0.293432 | tig0043929:-6960 | Msa1464150:CDS |
| CAATTGCAAACATCACTTGC+AGG | 0.310992 | tig0043929:-2986 | Msa1464150:intron |
| ATAACCTCAGCTTTAGTAAC+AGG | 0.311261 | tig0043929:+7010 | Msa1464150:intergenic |
| TGTTGTACTATCTTCTCTTA+AGG | 0.316583 | tig0043929:-1238 | Msa1464150:CDS |
| TAAGGAAGAGTGATGACTTC+TGG | 0.333268 | tig0043929:+1099 | Msa1464150:intergenic |
| ATTGATGCTATACGGAATCT+AGG | 0.335694 | tig0043929:-6899 | Msa1464150:CDS |
| GTTGTATTATGTATAGTATA+TGG | 0.339524 | tig0043929:-1138 | Msa1464150:three_prime_UTR |
| TCCTCTGGCACCCAGTCCTC+TGG | 0.346252 | tig0043929:+5106 | Msa1464150:intergenic |
| ATACATAGGTAGAGAAATAT+AGG | 0.349225 | tig0043929:+5238 | Msa1464150:intergenic |
| TGCTCATTGGACTTCTGTTT+AGG | 0.350292 | tig0043929:+5079 | Msa1464150:intergenic |
| CAATTTGATTGGAGACTTAC+CGG | 0.353350 | tig0043929:+7935 | Msa1464150:intergenic |
| GACAGAAGACAGAAACAAAC+TGG | 0.355547 | tig0043929:-8063 | Msa1464150:five_prime_UTR |
| TCCCACAGAGTTATTACGTT+TGG | 0.361503 | tig0043929:+5329 | Msa1464150:intergenic |
| TTCCTTAGTCCCTCGTGTAT+TGG | 0.368361 | tig0043929:-1083 | Msa1464150:three_prime_UTR |
| GTATTGGCATACCTCTTCTA+AGG | 0.369504 | tig0043929:-1067 | Msa1464150:three_prime_UTR |
| TTTAGTGGAGAAACTAATCT+TGG | 0.370035 | tig0043929:-7166 | Msa1464150:CDS |
| GCAGAACCAACGAGTGTTCC+AGG | 0.370899 | tig0043929:+5995 | Msa1464150:intergenic |
| GAGAGGGAAAACAATTTGAT+TGG | 0.375241 | tig0043929:+7924 | Msa1464150:intergenic |
| ATCATGCTTGCCACTAAATC+AGG | 0.376042 | tig0043929:+3041 | Msa1464150:intergenic |
| CTCATCATGACCCAGAAAAC+TGG | 0.377169 | tig0043929:+7210 | Msa1464150:intergenic |
| ACCTAAAATAATTGTGCATA+AGG | 0.381520 | tig0043929:+7812 | Msa1464150:intergenic |
| TGTTTGTTGCTGGGTGAAAA+AGG | 0.386200 | tig0043929:+7989 | Msa1464150:intergenic |
| CTAATCTTGGAAATAGTGTT+AGG | 0.388389 | tig0043929:-7153 | Msa1464150:CDS |
| AGCTTGGAGGACCAAGACTT+TGG | 0.399701 | tig0043929:-1305 | Msa1464150:CDS |
| GAGATGAGAGGCCAGAGGAC+TGG | 0.400303 | tig0043929:-5117 | Msa1464150:CDS |
| TTGTTGACAGTACTTCAGTA+TGG | 0.402969 | tig0043929:-5302 | Msa1464150:CDS |
| AAATCCATCCGTGAGCAATA+TGG | 0.403168 | tig0043929:+3306 | Msa1464150:intergenic |
| AGATGAGAGGCCAGAGGACT+GGG | 0.404824 | tig0043929:-5116 | Msa1464150:CDS |
| AGAGCACTCCACTTGCTCAT+TGG | 0.407702 | tig0043929:+5066 | Msa1464150:intergenic |
| ACATAATACAACAATGGATA+AGG | 0.408035 | tig0043929:+1149 | Msa1464150:intergenic |
| TAGCTACTATTGATGCTATA+CGG | 0.408093 | tig0043929:-6907 | Msa1464150:CDS |
| GACCTCATGGCCTGATTTAG+TGG | 0.424047 | tig0043929:-3051 | Msa1464150:CDS |
| TTCACCCTAGAGAGGAACTT+TGG | 0.425398 | tig0043929:-935 | Msa1464150:three_prime_UTR |
| TTTCCATAGATTGAAAGAAC+CGG | 0.427654 | tig0043929:+7071 | Msa1464150:intergenic |
| GGTGATGTGAATGTTATCTT+TGG | 0.433695 | tig0043929:-7333 | Msa1464150:intron |
| AGTTTCCAAAGTTCCTCTCT+AGG | 0.444295 | tig0043929:+930 | Msa1464150:intergenic |
| TGCCAAATCCAAGTAGCAAA+AGG | 0.447498 | tig0043929:+7265 | Msa1464150:intergenic |
| TGGAGACTTACCGGCGAAGA+TGG | 0.447611 | tig0043929:+7944 | Msa1464150:intergenic |
| CATAATACAACAATGGATAA+GGG | 0.459605 | tig0043929:+1150 | Msa1464150:intergenic |
| GCTTGGAGGACCAAGACTTT+GGG | 0.459664 | tig0043929:-1304 | Msa1464150:CDS |
| TATGTAATACAATAAAATAA+GGG | 0.460893 | tig0043929:+1027 | Msa1464150:intergenic |
| GAATTTAGAATTGAAAATTG+AGG | 0.464057 | tig0043929:+7857 | Msa1464150:intergenic |
| TTCTGTTTAGGAGTCTCCTC+TGG | 0.464478 | tig0043929:+5091 | Msa1464150:intergenic |
| AATTTAGAATTGAAAATTGA+GGG | 0.466104 | tig0043929:+7858 | Msa1464150:intergenic |
| AATACAATTCTAAATGAATC+CGG | 0.467656 | tig0043929:+1212 | Msa1464150:intergenic |
| GTCTGTATAATACAAATTAA+GGG | 0.472461 | tig0043929:+1172 | Msa1464150:intergenic |
| CAATGACGGTGTTTGTTGCT+GGG | 0.473628 | tig0043929:+7980 | Msa1464150:intergenic |
| TTGATGCTATACGGAATCTA+GGG | 0.475105 | tig0043929:-6898 | Msa1464150:CDS |
| TGGAAACTATTGTTTATGGC+TGG | 0.476306 | tig0043929:-915 | Msa1464150:three_prime_UTR |
| CACTAGCCAGTGGGACCTCA+TGG | 0.480616 | tig0043929:-3064 | Msa1464150:CDS |
| TACATAGGTAGAGAAATATA+GGG | 0.482391 | tig0043929:+5239 | Msa1464150:intergenic |
| ATGTATAGTATATGGTTCCT+AGG | 0.486712 | tig0043929:-1130 | Msa1464150:three_prime_UTR |
| AATCTAGGGGACTTGTATGC+TGG | 0.488664 | tig0043929:-6884 | Msa1464150:CDS |
| CAAGCATTCAAGGGAGGTTG+TGG | 0.489055 | tig0043929:-7041 | Msa1464150:CDS |
| TGCCAATACACGAGGGACTA+AGG | 0.491425 | tig0043929:+1081 | Msa1464150:intergenic |
| TACCACACAAACAGCGTGGA+TGG | 0.500886 | tig0043929:+5955 | Msa1464150:intergenic |
| GATCTTATAAGTTGTGTCAC+AGG | 0.501702 | tig0043929:-3224 | Msa1464150:intron |
| CCTCTCCGAATCCAAAATGC+AGG | 0.501742 | tig0043929:-1417 | Msa1464150:CDS |
| GCCAGAGGACTGGGTGCCAG+AGG | 0.506783 | tig0043929:-5107 | Msa1464150:CDS |
| ATCCGTGAGCAATATGGCAC+GGG | 0.508022 | tig0043929:+3312 | Msa1464150:intergenic |
| TATTTGGAGACAGCAATTTG+TGG | 0.508898 | tig0043929:-4744 | Msa1464150:CDS |
| GAGGACCAAGACTTTGGGCA+TGG | 0.513831 | tig0043929:-1299 | Msa1464150:CDS |
| TAATATTTAGGTTTGGGACC+TGG | 0.520382 | tig0043929:-6013 | Msa1464150:intron |
| TTGAATTGATAGAGCAGAGA+GGG | 0.522746 | tig0043929:+7908 | Msa1464150:intergenic |
| GTTTCCAAAGTTCCTCTCTA+GGG | 0.525870 | tig0043929:+931 | Msa1464150:intergenic |
| AAAATGTGGTCAAGCATTCA+AGG | 0.527731 | tig0043929:-7051 | Msa1464150:CDS |
| TTACATTGTGACTAAGATAA+CGG | 0.532903 | tig0043929:-3246 | Msa1464150:CDS |
| ATCAGGCCATGAGGTCCCAC+TGG | 0.534624 | tig0043929:+3058 | Msa1464150:intergenic |
| TTCCATAGATTGAAAGAACC+GGG | 0.535724 | tig0043929:+7072 | Msa1464150:intergenic |
| ATGTTGGCATTGGTGTTCCA+TGG | 0.536328 | tig0043929:-1479 | Msa1464150:CDS |
| GTAACCCATGCCCAAAGTCT+TGG | 0.537079 | tig0043929:+1294 | Msa1464150:intergenic |
| CCACACAAACAGCGTGGATG+GGG | 0.537126 | tig0043929:+5957 | Msa1464150:intergenic |
| ACCACACAAACAGCGTGGAT+GGG | 0.540101 | tig0043929:+5956 | Msa1464150:intergenic |
| CCCCATCCACGCTGTTTGTG+TGG | 0.540973 | tig0043929:-5957 | Msa1464150:CDS |
| CTTTCAATCTATGGAAAATG+TGG | 0.541423 | tig0043929:-7065 | Msa1464150:CDS |
| AGAACGTGTTTACATTTGCA+TGG | 0.543137 | tig0043929:+8037 | Msa1464150:intergenic |
| GAATTCGCCGGTGGCAATGA+CGG | 0.549191 | tig0043929:+7966 | Msa1464150:intergenic |
| GCCAAATCCAAGTAGCAAAA+GGG | 0.552220 | tig0043929:+7266 | Msa1464150:intergenic |
| TGAGATACATCCAACGGAAG+TGG | 0.554803 | tig0043929:+1362 | Msa1464150:intergenic |
| CAAGGTTATAGAAACAAGAC+TGG | 0.557010 | tig0043929:-4786 | Msa1464150:CDS |
| AGGACCAAGACTTTGGGCAT+GGG | 0.560608 | tig0043929:-1298 | Msa1464150:CDS |
| TGTGTGGTAATTCCAAAAGC+AGG | 0.563593 | tig0043929:-5941 | Msa1464150:CDS |
| AGAGTGATGACTTCTGGAGA+GGG | 0.568361 | tig0043929:+1105 | Msa1464150:intergenic |
| TTTAGAATTGAAAATTGAGG+GGG | 0.573797 | tig0043929:+7860 | Msa1464150:intergenic |
| ACAAACACCGTCATTGCCAC+CGG | 0.574351 | tig0043929:-7973 | Msa1464150:five_prime_UTR |
| ATGTAATACAATAAAATAAG+GGG | 0.574807 | tig0043929:+1028 | Msa1464150:intergenic |
| TGTAATACAATAAAATAAGG+GGG | 0.575055 | tig0043929:+1029 | Msa1464150:intergenic |
| CGTGCCATATTGCTCACGGA+TGG | 0.575588 | tig0043929:-3310 | Msa1464150:CDS |
| TACAAAGTATCTATAAGCCA+TGG | 0.575688 | tig0043929:+1462 | Msa1464150:intergenic |
| CCGGCGAATTCCATCTTCGC+CGG | 0.580070 | tig0043929:-7954 | Msa1464150:five_prime_UTR |
| GTAATACAATAAAATAAGGG+GGG | 0.582188 | tig0043929:+1030 | Msa1464150:intergenic |
| ACAGAAGTCCAATGAGCAAG+TGG | 0.582888 | tig0043929:-5074 | Msa1464150:CDS |
| GTGAACATATATGTTGGCAT+TGG | 0.584692 | tig0043929:-1489 | Msa1464150:CDS |
| CTCTCCGAATCCAAAATGCA+GGG | 0.585004 | tig0043929:-1416 | Msa1464150:CDS |
| AATTCAGTGAACATATATGT+TGG | 0.588017 | tig0043929:-1495 | Msa1464150:CDS |
| TAATACAATAAAATAAGGGG+GGG | 0.589302 | tig0043929:+1031 | Msa1464150:intergenic |
| CTAGGGGACTTGTATGCTGG+AGG | 0.592030 | tig0043929:-6881 | Msa1464150:intron |
| GATTATCGGCTATAACATCC+CGG | 0.597399 | tig0043929:-7090 | Msa1464150:CDS |
| TACTATACATAATACAACAA+TGG | 0.599493 | tig0043929:+1143 | Msa1464150:intergenic |
| TTGGGACCTGGAACACTCGT+TGG | 0.601934 | tig0043929:-6001 | Msa1464150:CDS |
| CATCCGTGAGCAATATGGCA+CGG | 0.604119 | tig0043929:+3311 | Msa1464150:intergenic |
| GCAATTTGTGGATGCACTGA+CGG | 0.607292 | tig0043929:-4732 | Msa1464150:intron |
| ATAGTAGCTAATGAAATCTG+AGG | 0.608171 | tig0043929:+6920 | Msa1464150:intergenic |
| ATTTAGAATTGAAAATTGAG+GGG | 0.612355 | tig0043929:+7859 | Msa1464150:intergenic |
| ATTAAATCTTCACCCTAGAG+AGG | 0.615522 | tig0043929:-943 | Msa1464150:three_prime_UTR |
| GAACAATATCTATATCCGCA+TGG | 0.616505 | tig0043929:-3393 | Msa1464150:CDS |
| CATTTACAGCACTAGCCAGT+GGG | 0.620095 | tig0043929:-3073 | Msa1464150:CDS |
| ATTGTGCATAAGGCAAGTTG+TGG | 0.626035 | tig0043929:+7822 | Msa1464150:intergenic |
| AAGAGTGATGACTTCTGGAG+AGG | 0.626377 | tig0043929:+1104 | Msa1464150:intergenic |
| CCGGCGAAGATGGAATTCGC+CGG | 0.627878 | tig0043929:+7954 | Msa1464150:intergenic |
| CTCCAAACGTAATAACTCTG+TGG | 0.633255 | tig0043929:-5331 | Msa1464150:CDS |
| TCCAAACGTAATAACTCTGT+GGG | 0.636007 | tig0043929:-5330 | Msa1464150:CDS |
| GCATTTACAGCACTAGCCAG+TGG | 0.639064 | tig0043929:-3074 | Msa1464150:CDS |
| GACTTCTGGAGAGGGCACCT+AGG | 0.639315 | tig0043929:+1113 | Msa1464150:intergenic |
| AAATGTGGTCAAGCATTCAA+GGG | 0.639474 | tig0043929:-7050 | Msa1464150:CDS |
| CTCCGAATCCAAAATGCAGG+GGG | 0.644346 | tig0043929:-1414 | Msa1464150:CDS |
| TTTGAAGTGCAAGAGATGAG+AGG | 0.653443 | tig0043929:-5129 | Msa1464150:intron |
| ATTGAATTGATAGAGCAGAG+AGG | 0.661520 | tig0043929:+7907 | Msa1464150:intergenic |
| TGCAAGAGATGAGAGGCCAG+AGG | 0.661620 | tig0043929:-5122 | Msa1464150:CDS |
| AGATCCTGTTACTAAAGCTG+AGG | 0.663014 | tig0043929:-7014 | Msa1464150:CDS |
| CTTATGCTCAAGACAAACGT+TGG | 0.664142 | tig0043929:-5262 | Msa1464150:CDS |
| GCGAAGATGGAATTCGCCGG+TGG | 0.665334 | tig0043929:+7957 | Msa1464150:intergenic |
| AAAGCGAACATAAATCTCCA+CGG | 0.667049 | tig0043929:+3341 | Msa1464150:intergenic |
| TGATGCAGAAAATTCTGACA+AGG | 0.670071 | tig0043929:-4804 | Msa1464150:CDS |
| CAAAACTGAGATACATCCAA+CGG | 0.671625 | tig0043929:+1356 | Msa1464150:intergenic |
| TCTCCGAATCCAAAATGCAG+GGG | 0.673864 | tig0043929:-1415 | Msa1464150:CDS |
| TGCCACTAAATCAGGCCATG+AGG | 0.674005 | tig0043929:+3049 | Msa1464150:intergenic |
| GGTTATAGAAACAAGACTGG+AGG | 0.674995 | tig0043929:-4783 | Msa1464150:CDS |
| AAACGTAATAACTCTGTGGG+AGG | 0.682559 | tig0043929:-5327 | Msa1464150:CDS |
| AAGAGGTATGCCAATACACG+AGG | 0.689617 | tig0043929:+1073 | Msa1464150:intergenic |
| TGATGCTATACGGAATCTAG+GGG | 0.693834 | tig0043929:-6897 | Msa1464150:CDS |
| ATACTGAAGTACTGTCAACA+AGG | 0.696254 | tig0043929:+5304 | Msa1464150:intergenic |
| TGTGGTCAAGCATTCAAGGG+AGG | 0.696613 | tig0043929:-7047 | Msa1464150:CDS |
| GCCAGAAAATTCGAGCCATG+CGG | 0.701112 | tig0043929:+3378 | Msa1464150:intergenic |
| TCCGTGAGCAATATGGCACG+GGG | 0.703400 | tig0043929:+3313 | Msa1464150:intergenic |
| ACAGAAGACAGAAACAAACT+GGG | 0.703734 | tig0043929:-8062 | Msa1464150:five_prime_UTR |
| GAATTACCACACAAACAGCG+TGG | 0.704440 | tig0043929:+5951 | Msa1464150:intergenic |
| AGAGGTATGCCAATACACGA+GGG | 0.724082 | tig0043929:+1074 | Msa1464150:intergenic |
| AGGTGGAACAGCTACCTCTG+GGG | 0.738813 | tig0043929:+4978 | Msa1464150:intergenic |
| ATTCATTCAGAAAACCCCAG+AGG | 0.754168 | tig0043929:-4992 | Msa1464150:intron |
| CCGTGAGCAATATGGCACGG+GGG | 0.777065 | tig0043929:+3314 | Msa1464140:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATAAAAAATAAATAAAT+AGG | - | tig0043929:6817-6836 | Msa1464150:intron | 0.0% |
| !!! | TTAAAATATTAGTTTTCAAA+AGG | - | tig0043929:1501-1520 | Msa1464150:intron | 10.0% |
| !!! | TATAGAAAAATAGATTTTAA+AGG | - | tig0043929:2661-2680 | Msa1464150:intron | 10.0% |
| !! | AATTCATTTATAAAATGAAA+AGG | + | tig0043929:4522-4541 | Msa1464150:intergenic | 10.0% |
| !! | TTGAATTATAAATTTATATG+GGG | - | tig0043929:5373-5392 | Msa1464150:intron | 10.0% |
| !! | TCTTAACTTATATATTAATA+CGG | + | tig0043929:6783-6802 | Msa1464150:intergenic | 10.0% |
| !!! | CTTCTTTTTTTTTTTTTTAT+CGG | + | tig0043929:6940-6959 | Msa1464150:intergenic | 10.0% |
| !! | TAAAAAAAAAAAAAAGAAGA+TGG | - | tig0043929:6941-6960 | Msa1464150:CDS | 10.0% |
| !! | TATGTAATACAATAAAATAA+GGG | + | tig0043929:7954-7973 | Msa1464150:intergenic | 10.0% |
| !!! | AATTTAGAATTGAAAATTGA+GGG | + | tig0043929:1123-1142 | Msa1464150:intergenic | 15.0% |
| !! | AGAAAAATGTATAAAATGAT+TGG | - | tig0043929:1737-1756 | Msa1464150:intron | 15.0% |
| !! | GAAAAATGTATAAAATGATT+GGG | - | tig0043929:1738-1757 | Msa1464150:intron | 15.0% |
| !!! | AATTGCTTTTTATATTTTGA+GGG | - | tig0043929:2892-2911 | Msa1464150:intron | 15.0% |
| !!! | ATGTTTAAACTTTAAAACAA+AGG | + | tig0043929:3170-3189 | Msa1464150:intergenic | 15.0% |
| !!! | AAACTTTTAAATACTTCTAA+TGG | + | tig0043929:3520-3539 | Msa1464150:intergenic | 15.0% |
| !!! | AATCATTTTAATGAAGAAAA+CGG | - | tig0043929:3941-3960 | Msa1464150:intron | 15.0% |
| !! | TAAAAAAACAATGTAAAGTT+TGG | - | tig0043929:5257-5276 | Msa1464150:CDS | 15.0% |
| !! | AGAGTAACTAAAAATAAATT+TGG | - | tig0043929:6242-6261 | Msa1464150:intron | 15.0% |
| !! | TTAACTTATATATTAATACG+GGG | + | tig0043929:6781-6800 | Msa1464150:intergenic | 15.0% |
| !! | CTTAACTTATATATTAATAC+GGG | + | tig0043929:6782-6801 | Msa1464150:intergenic | 15.0% |
| !!! | CTATATGTAAGTTATTTTAT+TGG | - | tig0043929:7379-7398 | Msa1464150:intron | 15.0% |
| !! | ATGTAATACAATAAAATAAG+GGG | + | tig0043929:7953-7972 | Msa1464150:intergenic | 15.0% |
| !! | GTATGTAATACAATAAAATA+AGG | + | tig0043929:7955-7974 | Msa1464150:intergenic | 15.0% |
| !!! | CATACTAATATATTTTTTGT+TGG | - | tig0043929:7970-7989 | Msa1464150:five_prime_UTR | 15.0% |
| !!! | ATTTAGAATTGAAAATTGAG+GGG | + | tig0043929:1122-1141 | Msa1464150:intergenic | 20.0% |
| !!! | GAATTTAGAATTGAAAATTG+AGG | + | tig0043929:1124-1143 | Msa1464150:intergenic | 20.0% |
| !! | TTCAATGATTAAGAAAATTG+AGG | + | tig0043929:1213-1232 | Msa1464150:intergenic | 20.0% |
| !!! | TATTTATTTCTATGCATTGA+CGG | - | tig0043929:1266-1285 | Msa1464150:CDS | 20.0% |
| !!! | TTTTAAGTGACAAAATATCT+TGG | + | tig0043929:1487-1506 | Msa1464150:intergenic | 20.0% |
| !!! | GTATTGTTTTATTGGATTAT+CGG | - | tig0043929:1874-1893 | Msa1464150:intron | 20.0% |
| !! | TTATTAAACATGAGAAAGTT+TGG | - | tig0043929:1987-2006 | Msa1464150:intron | 20.0% |
| !!! | TTGATATGTTCATTGATTTT+GGG | - | tig0043929:2166-2185 | Msa1464150:intron | 20.0% |
| !!! | AATAGATTTTAAAGGTACAA+AGG | - | tig0043929:2669-2688 | Msa1464150:intron | 20.0% |
| !!! | TTCTCTAAAATTTAATTGCA+AGG | - | tig0043929:2726-2745 | Msa1464150:intron | 20.0% |
| !!! | CAATTGCTTTTTATATTTTG+AGG | - | tig0043929:2891-2910 | Msa1464150:intron | 20.0% |
| !!! | ATTGCTTTTTATATTTTGAG+GGG | - | tig0043929:2893-2912 | Msa1464150:intron | 20.0% |
| !! | TATAACTGTGCTTAATATTT+AGG | - | tig0043929:2953-2972 | Msa1464150:intron | 20.0% |
| !!! | CATTTGGTTATACATAATTT+TGG | - | tig0043929:3126-3145 | Msa1464150:intron | 20.0% |
| !! | CGGGTTAATAAAAAATAAAA+AGG | + | tig0043929:3214-3233 | Msa1464150:intergenic | 20.0% |
| !! | AAACTGTATTGCAAAATTTA+GGG | - | tig0043929:3288-3307 | Msa1464150:CDS | 20.0% |
| !! | AAACAATAAAACTGATGATA+CGG | + | tig0043929:3568-3587 | Msa1464150:intergenic | 20.0% |
| !! | TTCATAAAGAAGTTTAATGT+AGG | - | tig0043929:3618-3637 | Msa1464150:intron | 20.0% |
| !!! | ATCATTTTAATGAAGAAAAC+GGG | - | tig0043929:3942-3961 | Msa1464150:intron | 20.0% |
| !! | ATACATATTTGCTTACTATT+TGG | - | tig0043929:4218-4237 | Msa1464150:intron | 20.0% |
| !!! | TAGTTAATCAGGAAATTTTA+TGG | - | tig0043929:4439-4458 | Msa1464150:intron | 20.0% |
| !! | AATTATAAATTTATATGGGG+AGG | - | tig0043929:5376-5395 | Msa1464150:intron | 20.0% |
| !! | ATTATAAATTTATATGGGGA+GGG | - | tig0043929:5377-5396 | Msa1464150:intron | 20.0% |
| !! | TGAACATTAGTTCATTAATA+AGG | - | tig0043929:5464-5483 | Msa1464150:intron | 20.0% |
| !! | TATAATTTACTGTAAAGAAG+TGG | + | tig0043929:5809-5828 | Msa1464150:intergenic | 20.0% |
| !! | CTAATAGTTACCAAAATTTA+TGG | - | tig0043929:6104-6123 | Msa1464150:intron | 20.0% |
| !!! | ATTTTTTTAGTTTAACCTGA+AGG | - | tig0043929:6149-6168 | Msa1464150:intron | 20.0% |
| !! | GTCCTAAATATTAACTATAA+TGG | - | tig0043929:6287-6306 | Msa1464150:intron | 20.0% |
| !! | CTCCATTATAGTTAATATTT+AGG | + | tig0043929:6292-6311 | Msa1464150:intergenic | 20.0% |
| !! | TATATGTACTTAGAACAATT+AGG | + | tig0043929:6509-6528 | Msa1464150:intergenic | 20.0% |
| !! | AAGTACATATATTTCGATAT+AGG | - | tig0043929:6518-6537 | Msa1464150:intron | 20.0% |
| !! | TAAATTTCAATAACAAAAGC+AGG | + | tig0043929:7083-7102 | Msa1464150:intergenic | 20.0% |
| !! | TTATTGAAATTTAGTGAGAT+CGG | - | tig0043929:7090-7109 | Msa1464150:CDS | 20.0% |
| !! | GAGATAATTTAATATGTATG+TGG | - | tig0043929:7207-7226 | Msa1464150:CDS | 20.0% |
| !!! | ATTCATTGTTGACATTTTTA+TGG | + | tig0043929:7263-7282 | Msa1464150:intergenic | 20.0% |
| !! | AATACAATTCTAAATGAATC+CGG | + | tig0043929:7769-7788 | Msa1464150:intergenic | 20.0% |
| !! | GTCTGTATAATACAAATTAA+GGG | + | tig0043929:7809-7828 | Msa1464150:intergenic | 20.0% |
| !! | TACTATACATAATACAACAA+TGG | + | tig0043929:7838-7857 | Msa1464150:intergenic | 20.0% |
| !! | GTTGTATTATGTATAGTATA+TGG | - | tig0043929:7840-7859 | Msa1464150:five_prime_UTR | 20.0% |
| !! | TGTAATACAATAAAATAAGG+GGG | + | tig0043929:7952-7971 | Msa1464150:intergenic | 20.0% |
| !! | TTTAGAATTGAAAATTGAGG+GGG | + | tig0043929:1121-1140 | Msa1464150:intergenic | 25.0% |
| ! | ACCTAAAATAATTGTGCATA+AGG | + | tig0043929:1169-1188 | Msa1464150:intergenic | 25.0% |
| !! | TGTAGTTGATATGATTTGAT+TGG | - | tig0043929:1354-1373 | Msa1464150:CDS | 25.0% |
| ! | CTAATCTATGCTTATATATC+AGG | - | tig0043929:1624-1643 | Msa1464150:intron | 25.0% |
| !!! | ACATAACTGATCTGAAATTT+TGG | - | tig0043929:1678-1697 | Msa1464150:intron | 25.0% |
| !! | AGGATATTGTTGTATTTTCT+TGG | - | tig0043929:1845-1864 | Msa1464150:intron | 25.0% |
| !!! | TATTGCAGATATTAGTCTTT+TGG | - | tig0043929:2018-2037 | Msa1464150:intron | 25.0% |
| !!! | CTTGATATGTTCATTGATTT+TGG | - | tig0043929:2165-2184 | Msa1464150:intron | 25.0% |
| ! | GAAATTTACTGAATTTATGC+TGG | - | tig0043929:2202-2221 | Msa1464150:intron | 25.0% |
| !! | GTTAATATGTCTTTCCATTT+TGG | - | tig0043929:2332-2351 | Msa1464150:intron | 25.0% |
| ! | AAAGTGGAAAGACAAATAAA+AGG | + | tig0043929:2364-2383 | Msa1464150:intergenic | 25.0% |
| !!! | TTTTATTTGTCTTTCCACTT+TGG | - | tig0043929:2363-2382 | Msa1464150:intron | 25.0% |
| ! | TTTATTTGTCTTTCCACTTT+GGG | - | tig0043929:2364-2383 | Msa1464150:intron | 25.0% |
| ! | TCTTTAGGTATGTTAATCAT+AGG | + | tig0043929:2478-2497 | Msa1464150:intergenic | 25.0% |
| ! | GATTAACATACCTAAAGAAT+TGG | - | tig0043929:2480-2499 | Msa1464150:intron | 25.0% |
| !! | TGTGCTTAATATTTAGGTTT+GGG | - | tig0043929:2959-2978 | Msa1464150:intron | 25.0% |
| !! | TTGGTTATACATAATTTTGG+AGG | - | tig0043929:3129-3148 | Msa1464150:intron | 25.0% |
| !!! | ACTTTAAAACAAAGGAATGT+TGG | + | tig0043929:3162-3181 | Msa1464150:intergenic | 25.0% |
| ! | ATCAAATTACAGTTCTTACA+CGG | + | tig0043929:3234-3253 | Msa1464150:intergenic | 25.0% |
| ! | CAAACTGTATTGCAAAATTT+AGG | - | tig0043929:3287-3306 | Msa1464150:CDS | 25.0% |
| !! | GATACGATTTTACATTTCAA+TGG | - | tig0043929:3363-3382 | Msa1464150:CDS | 25.0% |
| ! | TATGAATATTCCGCATAAAA+AGG | + | tig0043929:3604-3623 | Msa1464150:intergenic | 25.0% |
| ! | AAAGAAGTTTAATGTAGGTA+TGG | - | tig0043929:3623-3642 | Msa1464150:intron | 25.0% |
| ! | TACATAGGTAGAGAAATATA+GGG | + | tig0043929:3742-3761 | Msa1464150:intergenic | 25.0% |
| ! | ATACATAGGTAGAGAAATAT+AGG | + | tig0043929:3743-3762 | Msa1464150:intergenic | 25.0% |
| ! | TGCACTTCAAATATAAAATG+AGG | + | tig0043929:3840-3859 | Msa1464150:intergenic | 25.0% |
| !!! | TCATTTTAATGAAGAAAACG+GGG | - | tig0043929:3943-3962 | Msa1464150:intron | 25.0% |
| ! | AAATAGTTATACTAGAATCG+TGG | + | tig0043929:4382-4401 | Msa1464150:intergenic | 25.0% |
| ! | AATGTTAATGAATCTCTGAT+AGG | + | tig0043929:4415-4434 | Msa1464150:intergenic | 25.0% |
| ! | TATCAGAGATTCATTAACAT+TGG | - | tig0043929:4414-4433 | Msa1464150:intron | 25.0% |
| !! | AGGAAATTTTATGGATATGA+AGG | - | tig0043929:4448-4467 | Msa1464150:intron | 25.0% |
| ! | GTTAAGAATTTCATCATAAG+AGG | + | tig0043929:4491-4510 | Msa1464150:intergenic | 25.0% |
| !! | AGCTACTTTATAAGGAAATA+TGG | + | tig0043929:4702-4721 | Msa1464150:intergenic | 25.0% |
| !! | TAACAATGAGCTACTTTATA+AGG | + | tig0043929:4710-4729 | Msa1464150:intergenic | 25.0% |
| ! | AACTATGTAAAGCAACAATA+GGG | + | tig0043929:4853-4872 | Msa1464150:intergenic | 25.0% |
| ! | TAACTATGTAAAGCAACAAT+AGG | + | tig0043929:4854-4873 | Msa1464150:intergenic | 25.0% |
| !! | TAGTATGTTTCTGAATGAAA+TGG | - | tig0043929:4929-4948 | Msa1464150:intron | 25.0% |
| !! | AGTATGTTTCTGAATGAAAT+GGG | - | tig0043929:4930-4949 | Msa1464150:intron | 25.0% |
| ! | AAGTTTCAAAGGTTACATAT+AGG | + | tig0043929:5148-5167 | Msa1464150:intergenic | 25.0% |
| !!! | ATGTAACCTTTGAAACTTAA+AGG | - | tig0043929:5150-5169 | Msa1464150:intron | 25.0% |
| ! | GTTACAAACGTGAAATTTAA+AGG | - | tig0043929:5181-5200 | Msa1464150:intron | 25.0% |
| ! | ATGCATCTCTTTATTATCAA+AGG | + | tig0043929:5322-5341 | Msa1464150:intergenic | 25.0% |
| !! | AGATGCATTAGTTTATGAAT+GGG | - | tig0043929:5334-5353 | Msa1464150:CDS | 25.0% |
| !!! | GGTGTGTAATTTTTTTAAAC+AGG | - | tig0043929:5537-5556 | Msa1464150:intron | 25.0% |
| !!! | GTGTAATTTTTTTAAACAGG+TGG | - | tig0043929:5540-5559 | Msa1464150:intron | 25.0% |
| !!! | TGTTCATTTTTTTAGACTCT+TGG | + | tig0043929:5570-5589 | Msa1464150:intergenic | 25.0% |
| ! | TTACATTGTGACTAAGATAA+CGG | - | tig0043929:5732-5751 | Msa1464150:intron | 25.0% |
| ! | GATGAAATAAGTCATTAACA+AGG | + | tig0043929:5844-5863 | Msa1464150:intergenic | 25.0% |
| !! | ATACATCTCATTCTTACTTT+TGG | - | tig0043929:6028-6047 | Msa1464150:intron | 25.0% |
| ! | AATGTAGACATATGTACAAA+TGG | - | tig0043929:6687-6706 | Msa1464150:intron | 25.0% |
| ! | ATTATGAACATAAGTGAACT+TGG | - | tig0043929:7056-7075 | Msa1464150:CDS | 25.0% |
| ! | AAATGTGAAGTTTGAATTGA+TGG | + | tig0043929:7152-7171 | Msa1464150:intergenic | 25.0% |
| ! | ACCTAGAAAATTTATTTCCT+AGG | - | tig0043929:7290-7309 | Msa1464150:five_prime_UTR | 25.0% |
| !! | TCCTAGGAAATAAATTTTCT+AGG | + | tig0043929:7294-7313 | Msa1464150:intergenic | 25.0% |
| ! | TCGAATCAAATTTCATTGTT+TGG | - | tig0043929:7316-7335 | Msa1464150:five_prime_UTR | 25.0% |
| ! | ATCAAATTTCATTGTTTGGT+TGG | - | tig0043929:7320-7339 | Msa1464150:five_prime_UTR | 25.0% |
| ! | AATTCAGTGAACATATATGT+TGG | - | tig0043929:7483-7502 | Msa1464150:intron | 25.0% |
| ! | GGTCTGTATAATACAAATTA+AGG | + | tig0043929:7810-7829 | Msa1464150:intergenic | 25.0% |
| ! | CATAATACAACAATGGATAA+GGG | + | tig0043929:7831-7850 | Msa1464150:intergenic | 25.0% |
| ! | ACATAATACAACAATGGATA+AGG | + | tig0043929:7832-7851 | Msa1464150:intergenic | 25.0% |
| !!! | ATTTTTAAAAGCCTTAGAAG+AGG | + | tig0043929:7925-7944 | Msa1464150:intergenic | 25.0% |
| ! | TAATACAATAAAATAAGGGG+GGG | + | tig0043929:7950-7969 | Msa1464150:intergenic | 25.0% |
| ! | GTAATACAATAAAATAAGGG+GGG | + | tig0043929:7951-7970 | Msa1464150:intergenic | 25.0% |
| !! | ACTTTGGAAACTATTGTTTA+TGG | - | tig0043929:8059-8078 | Msa1464150:five_prime_UTR | 25.0% |
| ! | GCCTTATGCACAATTATTTT+AGG | - | tig0043929:1165-1184 | Msa1464150:three_prime_UTR | 30.0% |
| ACATCATGGAGTGATTTAAT+TGG | + | tig0043929:1313-1332 | Msa1464150:intergenic | 30.0% | |
| !! | GAAAGCTACTTGATTTTTAG+TGG | - | tig0043929:1797-1816 | Msa1464150:intron | 30.0% |
| TTTAGTGGAGAAACTAATCT+TGG | - | tig0043929:1812-1831 | Msa1464150:intron | 30.0% | |
| CTAATCTTGGAAATAGTGTT+AGG | - | tig0043929:1825-1844 | Msa1464150:intron | 30.0% | |
| TTTCCATAGATTGAAAGAAC+CGG | + | tig0043929:1910-1929 | Msa1464150:intergenic | 30.0% | |
| CTTTCAATCTATGGAAAATG+TGG | - | tig0043929:1913-1932 | Msa1464150:intron | 30.0% | |
| ATAGTAGCTAATGAAATCTG+AGG | + | tig0043929:2061-2080 | Msa1464150:intergenic | 30.0% | |
| TAGCTACTATTGATGCTATA+CGG | - | tig0043929:2071-2090 | Msa1464150:intron | 30.0% | |
| ! | TTTTGAACTCTGTCTTTCAT+AGG | - | tig0043929:2135-2154 | Msa1464150:intron | 30.0% |
| TTATTTGTCTTTCCACTTTG+GGG | - | tig0043929:2365-2384 | Msa1464150:intron | 30.0% | |
| TTAGGTATGTTAATCATAGG+TGG | + | tig0043929:2475-2494 | Msa1464150:intergenic | 30.0% | |
| TGTCAACTAACCAATTCTTT+AGG | + | tig0043929:2493-2512 | Msa1464150:intergenic | 30.0% | |
| ! | CGACGATTTTAAACAGTTTA+AGG | + | tig0043929:2517-2536 | Msa1464150:intergenic | 30.0% |
| ! | GTGTTTTCTTTCAAATTGTG+AGG | + | tig0043929:2550-2569 | Msa1464150:intergenic | 30.0% |
| ! | TATTTTGTATATGTCAGTGC+TGG | - | tig0043929:2804-2823 | Msa1464150:intron | 30.0% |
| ! | CTGTGCTTAATATTTAGGTT+TGG | - | tig0043929:2958-2977 | Msa1464150:intron | 30.0% |
| TTGAAAAAGATTGCAGATCT+AGG | - | tig0043929:3064-3083 | Msa1464150:CDS | 30.0% | |
| ! | TATGGATAGTAGAGCTATTT+TGG | - | tig0043929:3089-3108 | Msa1464150:CDS | 30.0% |
| !!! | TAGAGCTATTTTGGTCATTT+TGG | - | tig0043929:3098-3117 | Msa1464150:intron | 30.0% |
| !!! | AGAGCTATTTTGGTCATTTT+GGG | - | tig0043929:3099-3118 | Msa1464150:intron | 30.0% |
| TCAAATTACAGTTCTTACAC+GGG | + | tig0043929:3233-3252 | Msa1464150:intergenic | 30.0% | |
| ATACAGTTTGTAAGAAGAGA+AGG | + | tig0043929:3277-3296 | Msa1464150:intergenic | 30.0% | |
| GTAAACGTAATAATACACGT+TGG | + | tig0043929:3389-3408 | Msa1464150:intergenic | 30.0% | |
| !! | CTTCAGTTTGTTTCATGTTT+TGG | - | tig0043929:3766-3785 | Msa1464150:intron | 30.0% |
| AGAAAGGTCAAAATTTGAGA+GGG | + | tig0043929:3808-3827 | Msa1464150:intergenic | 30.0% | |
| TAGAAAGGTCAAAATTTGAG+AGG | + | tig0043929:3809-3828 | Msa1464150:intergenic | 30.0% | |
| CAAATTTCACTACAATAAGG+TGG | + | tig0043929:4020-4039 | Msa1464150:intergenic | 30.0% | |
| CACCTTATTGTAGTGAAATT+TGG | - | tig0043929:4018-4037 | Msa1464150:intron | 30.0% | |
| AGCCAAATTTCACTACAATA+AGG | + | tig0043929:4023-4042 | Msa1464150:intergenic | 30.0% | |
| ! | TTTTCTGCATCATCTATTTG+AGG | + | tig0043929:4166-4185 | Msa1464150:intergenic | 30.0% |
| !! | TAACATTGGCTTAGTTAATC+AGG | - | tig0043929:4428-4447 | Msa1464150:intron | 30.0% |
| TAGTCAAGCTAAATTTCTTG+AGG | - | tig0043929:4822-4841 | Msa1464150:CDS | 30.0% | |
| GTTACAAACGTGAAACTTAA+AGG | + | tig0043929:4974-4993 | Msa1464150:intergenic | 30.0% | |
| ! | ATAGGTCCTTTAAGTTTCAA+AGG | - | tig0043929:4996-5015 | Msa1464150:CDS | 30.0% |
| !! | CTGTAACCTTTGAAACTTAA+AGG | + | tig0043929:5005-5024 | Msa1464150:intergenic | 30.0% |
| AAGTTTCAAAGGTTACAGAT+AGG | - | tig0043929:5007-5026 | Msa1464150:CDS | 30.0% | |
| ! | ATAGGTCCTTTAAGTTTCTA+AGG | - | tig0043929:5025-5044 | Msa1464150:CDS | 30.0% |
| CTGAAACCTTAGAAACTTAA+AGG | + | tig0043929:5034-5053 | Msa1464150:intergenic | 30.0% | |
| !! | AAGTTTCTAAGGTTTCAGAT+AGG | - | tig0043929:5036-5055 | Msa1464150:CDS | 30.0% |
| GAAACAAACTCGAAACTTAA+AGG | - | tig0043929:5092-5111 | Msa1464150:CDS | 30.0% | |
| ! | ATAGGTCCTTTAAGTTTCAA+AGG | + | tig0043929:4996-5015 | Msa1464150:intergenic | 30.0% |
| ATTTCACGTTTGTAACAGAT+AGG | + | tig0043929:5177-5196 | Msa1464150:intergenic | 30.0% | |
| !!! | CCTAGTTTTATGCATTTCAT+TGG | + | tig0043929:5225-5244 | Msa1464150:intergenic | 30.0% |
| CCAATGAAATGCATAAAACT+AGG | - | tig0043929:5222-5241 | Msa1464150:intron | 30.0% | |
| ! | GAGATGCATTAGTTTATGAA+TGG | - | tig0043929:5333-5352 | Msa1464150:CDS | 30.0% |
| !! | ATTAATAAGGAGTACTGATG+TGG | - | tig0043929:5477-5496 | Msa1464150:intron | 30.0% |
| !! | TTAATAAGGAGTACTGATGT+GGG | - | tig0043929:5478-5497 | Msa1464150:intron | 30.0% |
| !!! | TCTTTTTTTACCTCTTCAAC+AGG | - | tig0043929:5862-5881 | Msa1464150:intron | 30.0% |
| ! | ACTATAATGGAGTTAGCTTA+TGG | - | tig0043929:6300-6319 | Msa1464150:intron | 30.0% |
| GATTAATCAAATGCTCTAGT+AGG | - | tig0043929:6549-6568 | Msa1464150:intron | 30.0% | |
| AAAAAAAAGAAGATGGACCT+AGG | - | tig0043929:6948-6967 | Msa1464150:CDS | 30.0% | |
| !!! | CGTACATTTTTTAATGCAAG+AGG | - | tig0043929:7115-7134 | Msa1464150:CDS | 30.0% |
| CTTAAGATCGCTGTATAATT+GGG | + | tig0043929:7237-7256 | Msa1464150:intergenic | 30.0% | |
| ACTTAAGATCGCTGTATAAT+TGG | + | tig0043929:7238-7257 | Msa1464150:intergenic | 30.0% | |
| ! | GAAATTTGATTCGAAATCCT+AGG | + | tig0043929:7310-7329 | Msa1464150:intergenic | 30.0% |
| AAATTTCATTGTTTGGTTGG+AGG | - | tig0043929:7323-7342 | Msa1464150:five_prime_UTR | 30.0% | |
| CAGATGGGTATTAAATGAAA+GGG | + | tig0043929:7355-7374 | Msa1464150:intergenic | 30.0% | |
| TCAGATGGGTATTAAATGAA+AGG | + | tig0043929:7356-7375 | Msa1464150:intergenic | 30.0% | |
| CTTACATATAGAACTCAGAT+GGG | + | tig0043929:7370-7389 | Msa1464150:intergenic | 30.0% | |
| ACTTACATATAGAACTCAGA+TGG | + | tig0043929:7371-7390 | Msa1464150:intergenic | 30.0% | |
| TAAAGCTTCTTCATAGAACA+AGG | + | tig0043929:7415-7434 | Msa1464150:intergenic | 30.0% | |
| ! | TATGAAGAAGCTTTATAGAG+CGG | - | tig0043929:7420-7439 | Msa1464150:intron | 30.0% |
| ! | TACAAAGTATCTATAAGCCA+TGG | + | tig0043929:7519-7538 | Msa1464150:intergenic | 30.0% |
| !!! | GTATCTCAGTTTTGATTGTT+AGG | - | tig0043929:7631-7650 | Msa1464150:intron | 30.0% |
| ! | ATTGTTAGGCGTATAGTTTT+TGG | - | tig0043929:7645-7664 | Msa1464150:intron | 30.0% |
| TGTTGTACTATCTTCTCTTA+AGG | - | tig0043929:7740-7759 | Msa1464150:intron | 30.0% | |
| ATGTATAGTATATGGTTCCT+AGG | - | tig0043929:7848-7867 | Msa1464150:five_prime_UTR | 30.0% | |
| ACAGAAGACAGAAACAAACT+GGG | - | tig0043929:916-935 | Msa1464150:three_prime_UTR | 35.0% | |
| AGAACGTGTTTACATTTGCA+TGG | + | tig0043929:944-963 | Msa1464150:intergenic | 35.0% | |
| CAATTTGATTGGAGACTTAC+CGG | + | tig0043929:1046-1065 | Msa1464150:intergenic | 35.0% | |
| GAGAGGGAAAACAATTTGAT+TGG | + | tig0043929:1057-1076 | Msa1464150:intergenic | 35.0% | |
| TTGAATTGATAGAGCAGAGA+GGG | + | tig0043929:1073-1092 | Msa1464150:intergenic | 35.0% | |
| ATTGAATTGATAGAGCAGAG+AGG | + | tig0043929:1074-1093 | Msa1464150:intergenic | 35.0% | |
| AATTGAAAATTGAGGGGGAA+TGG | + | tig0043929:1116-1135 | Msa1464150:intergenic | 35.0% | |
| ACACGCATACAAATACATCA+TGG | + | tig0043929:1327-1346 | Msa1464150:intergenic | 35.0% | |
| GGTGATGTGAATGTTATCTT+TGG | - | tig0043929:1645-1664 | Msa1464150:intron | 35.0% | |
| !! | GGTCTTGCGTATTGTTTTAT+TGG | - | tig0043929:1866-1885 | Msa1464150:intron | 35.0% |
| TTCCATAGATTGAAAGAACC+GGG | + | tig0043929:1909-1928 | Msa1464150:intergenic | 35.0% | |
| AAAATGTGGTCAAGCATTCA+AGG | - | tig0043929:1927-1946 | Msa1464150:intron | 35.0% | |
| AAATGTGGTCAAGCATTCAA+GGG | - | tig0043929:1928-1947 | Msa1464150:intron | 35.0% | |
| ! | ATAACCTCAGCTTTAGTAAC+AGG | + | tig0043929:1971-1990 | Msa1464150:intergenic | 35.0% |
| !!! | GATATTAGTCTTTTGGCGTT+TGG | - | tig0043929:2025-2044 | Msa1464150:intron | 35.0% |
| ATTGATGCTATACGGAATCT+AGG | - | tig0043929:2079-2098 | Msa1464150:intron | 35.0% | |
| TTGATGCTATACGGAATCTA+GGG | - | tig0043929:2080-2099 | Msa1464150:intron | 35.0% | |
| AACTCTGTCTTTCATAGGAT+GGG | - | tig0043929:2140-2159 | Msa1464150:intron | 35.0% | |
| ATCTTACTAACTCTGCTTAG+TGG | - | tig0043929:2265-2284 | Msa1464150:intron | 35.0% | |
| AACTCTGCTTAGTGGAAAAA+AGG | - | tig0043929:2273-2292 | Msa1464150:intron | 35.0% | |
| ATGTTAATCATAGGTGGAGT+TGG | + | tig0043929:2469-2488 | Msa1464150:intergenic | 35.0% | |
| CTTGATCTTTAAGCTTACGT+TGG | - | tig0043929:2609-2628 | Msa1464150:intron | 35.0% | |
| GCACAGTTATAGAGAGTTAT+AGG | + | tig0043929:2944-2963 | Msa1464150:intergenic | 35.0% | |
| ! | TAATATTTAGGTTTGGGACC+TGG | - | tig0043929:2965-2984 | Msa1464150:intron | 35.0% |
| !! | TTTTTCAACTCTCCTGCTTT+TGG | + | tig0043929:3052-3071 | Msa1464150:intergenic | 35.0% |
| TAAGACTACCTCTCACTTTA+AGG | - | tig0043929:3333-3352 | Msa1464150:CDS | 35.0% | |
| AAGACTACCTCTCACTTTAA+GGG | - | tig0043929:3334-3353 | Msa1464150:CDS | 35.0% | |
| ! | ATTGTCCTAACTTGCAGATT+GGG | + | tig0043929:3453-3472 | Msa1464150:intergenic | 35.0% |
| ! | AATTGTCCTAACTTGCAGAT+TGG | + | tig0043929:3454-3473 | Msa1464150:intergenic | 35.0% |
| ! | TCCTGATTGTCCTTTTTATG+CGG | - | tig0043929:3591-3610 | Msa1464150:intron | 35.0% |
| TCCAAACGTAATAACTCTGT+GGG | - | tig0043929:3648-3667 | Msa1464150:intron | 35.0% | |
| !! | ATACTGAAGTACTGTCAACA+AGG | + | tig0043929:3677-3696 | Msa1464150:intergenic | 35.0% |
| TTGTTGACAGTACTTCAGTA+TGG | - | tig0043929:3676-3695 | Msa1464150:intron | 35.0% | |
| ACAAACTGAAGCACATACAT+AGG | + | tig0043929:3757-3776 | Msa1464150:intergenic | 35.0% | |
| ! | AATGAGGTGTCAGAATAGAA+AGG | + | tig0043929:3824-3843 | Msa1464150:intergenic | 35.0% |
| TCATGCAAGCAAATTGTTTC+AGG | + | tig0043929:4068-4087 | Msa1464150:intergenic | 35.0% | |
| TGATGCAGAAAATTCTGACA+AGG | - | tig0043929:4174-4193 | Msa1464150:intron | 35.0% | |
| CAAGGTTATAGAAACAAGAC+TGG | - | tig0043929:4192-4211 | Msa1464150:intron | 35.0% | |
| TATTTGGAGACAGCAATTTG+TGG | - | tig0043929:4234-4253 | Msa1464150:intron | 35.0% | |
| ! | GCTGTGGTTGTTGTTATAAT+TGG | + | tig0043929:4325-4344 | Msa1464150:intergenic | 35.0% |
| ! | ACTAGAATCGTGGATTTTGA+AGG | + | tig0043929:4372-4391 | Msa1464150:intergenic | 35.0% |
| AGTACCTGTTGAATTTCAGA+TGG | - | tig0043929:4675-4694 | Msa1464150:intron | 35.0% | |
| GTACCTGTTGAATTTCAGAT+GGG | - | tig0043929:4676-4695 | Msa1464150:intron | 35.0% | |
| !! | CTTGCTCGTATTGTTGATTT+GGG | - | tig0043929:4899-4918 | Msa1464150:intron | 35.0% |
| GTTTCACGTTTGTAACAGAT+AGG | - | tig0043929:4978-4997 | Msa1464150:intron | 35.0% | |
| !! | GTTTCGAGTTTGTTTCAGAT+AGG | + | tig0043929:5088-5107 | Msa1464150:intergenic | 35.0% |
| !! | AAGCTTCTAAGGTTTCAGAT+AGG | + | tig0043929:5119-5138 | Msa1464150:intergenic | 35.0% |
| CTGAAACCTTAGAAGCTTAA+AGG | - | tig0043929:5121-5140 | Msa1464150:CDS | 35.0% | |
| ATAGGTCCTTTAAGCTTCTA+AGG | + | tig0043929:5130-5149 | Msa1464150:intergenic | 35.0% | |
| !! | AACAATGTAAAGTTTGGTGC+TGG | - | tig0043929:5263-5282 | Msa1464150:CDS | 35.0% |
| ATAAATTTATATGGGGAGGG+AGG | - | tig0043929:5380-5399 | Msa1464150:intron | 35.0% | |
| TATCGTCAATTTCTGATGAC+TGG | - | tig0043929:5516-5535 | Msa1464150:intron | 35.0% | |
| GAACAATATCTATATCCGCA+TGG | - | tig0043929:5585-5604 | Msa1464150:intron | 35.0% | |
| AAAGCGAACATAAATCTCCA+CGG | + | tig0043929:5640-5659 | Msa1464150:intergenic | 35.0% | |
| GATCTTATAAGTTGTGTCAC+AGG | - | tig0043929:5754-5773 | Msa1464150:intron | 35.0% | |
| TTTACTGTAAAGAAGTGGAG+CGG | + | tig0043929:5804-5823 | Msa1464150:intergenic | 35.0% | |
| AGCATTTATTCCTGTTGAAG+AGG | + | tig0043929:5875-5894 | Msa1464150:intergenic | 35.0% | |
| ! | AAGCTGCACTCCATAAATTT+TGG | + | tig0043929:6117-6136 | Msa1464150:intergenic | 35.0% |
| !!! | GGAGTGCAGCTTTTTATTTT+TGG | - | tig0043929:6125-6144 | Msa1464150:intron | 35.0% |
| !! | TTTAACCTGAAGGTTCTGAA+AGG | - | tig0043929:6159-6178 | Msa1464150:intron | 35.0% |
| ATGGAAGTTTACTGAAGTAC+AGG | - | tig0043929:6319-6338 | Msa1464150:intron | 35.0% | |
| TGGAAGTTTACTGAAGTACA+GGG | - | tig0043929:6320-6339 | Msa1464150:intron | 35.0% | |
| !!! | GTTGCGCTCTTTTTTTTTTG+TGG | - | tig0043929:6600-6619 | Msa1464150:intron | 35.0% |
| TCTCTAATTGCTGTGAATGT+AGG | + | tig0043929:7191-7210 | Msa1464150:intergenic | 35.0% | |
| TCATAGAACAAGGATTTGAC+AGG | + | tig0043929:7405-7424 | Msa1464150:intergenic | 35.0% | |
| GTGAACATATATGTTGGCAT+TGG | - | tig0043929:7489-7508 | Msa1464150:intron | 35.0% | |
| CAAAACTGAGATACATCCAA+CGG | + | tig0043929:7625-7644 | Msa1464150:intergenic | 35.0% | |
| CTATCTTCTCTTAAGGTTTC+CGG | - | tig0043929:7747-7766 | Msa1464150:intron | 35.0% | |
| ATTAAATCTTCACCCTAGAG+AGG | - | tig0043929:8035-8054 | Msa1464150:five_prime_UTR | 35.0% | |
| TGGAAACTATTGTTTATGGC+TGG | - | tig0043929:8063-8082 | Msa1464150:five_prime_UTR | 35.0% | |
| GACAGAAGACAGAAACAAAC+TGG | - | tig0043929:915-934 | Msa1464150:three_prime_UTR | 40.0% | |
| ! | TGTTTGTTGCTGGGTGAAAA+AGG | + | tig0043929:992-1011 | Msa1464150:intergenic | 40.0% |
| ATTGTGCATAAGGCAAGTTG+TGG | + | tig0043929:1159-1178 | Msa1464150:intergenic | 40.0% | |
| GTTGAGTCAGTATCTATCAG+TGG | + | tig0043929:1449-1468 | Msa1464150:intergenic | 40.0% | |
| ! | ATTGAGACCCTTTTGCTACT+TGG | - | tig0043929:1705-1724 | Msa1464150:intron | 40.0% |
| !! | ACCCTTTTGCTACTTGGATT+TGG | - | tig0043929:1711-1730 | Msa1464150:intron | 40.0% |
| GCCAAATCCAAGTAGCAAAA+GGG | + | tig0043929:1715-1734 | Msa1464150:intergenic | 40.0% | |
| TGCCAAATCCAAGTAGCAAA+AGG | + | tig0043929:1716-1735 | Msa1464150:intergenic | 40.0% | |
| ! | TGGGTACTTATCCAGTTTTC+TGG | - | tig0043929:1757-1776 | Msa1464150:intron | 40.0% |
| ! | GGGTACTTATCCAGTTTTCT+GGG | - | tig0043929:1758-1777 | Msa1464150:intron | 40.0% |
| ! | GATTATCGGCTATAACATCC+CGG | - | tig0043929:1888-1907 | Msa1464150:intron | 40.0% |
| ATCCCGGTTCTTTCAATCTA+TGG | - | tig0043929:1904-1923 | Msa1464150:intron | 40.0% | |
| AGATCCTGTTACTAAAGCTG+AGG | - | tig0043929:1964-1983 | Msa1464150:intron | 40.0% | |
| TGATGCTATACGGAATCTAG+GGG | - | tig0043929:2081-2100 | Msa1464150:intron | 40.0% | |
| GAACTCTGTCTTTCATAGGA+TGG | - | tig0043929:2139-2158 | Msa1464150:intron | 40.0% | |
| ! | ATAAAAGGTGTGCGCCAAAA+TGG | + | tig0043929:2349-2368 | Msa1464150:intergenic | 40.0% |
| !!! | TTTGGGGTAGGCAACTTTTT+TGG | - | tig0043929:2381-2400 | Msa1464150:intron | 40.0% |
| TGTGTGGTAATTCCAAAAGC+AGG | - | tig0043929:3037-3056 | Msa1464150:CDS | 40.0% | |
| AGATTGCAGATCTAGGAGTA+TGG | - | tig0043929:3071-3090 | Msa1464150:CDS | 40.0% | |
| !! | GGTCATTTTGGGCTTACATT+TGG | - | tig0043929:3110-3129 | Msa1464150:intron | 40.0% |
| CTAACATCCCTTAAAGTGAG+AGG | + | tig0043929:3344-3363 | Msa1464150:intergenic | 40.0% | |
| TGGATATTCATCGTCAGCTT+AGG | + | tig0043929:3416-3435 | Msa1464150:intergenic | 40.0% | |
| ! | TTGTCCTAACTTGCAGATTG+GGG | + | tig0043929:3452-3471 | Msa1464150:intergenic | 40.0% |
| TCCGCATAAAAAGGACAATC+AGG | + | tig0043929:3595-3614 | Msa1464150:intergenic | 40.0% | |
| CTCCAAACGTAATAACTCTG+TGG | - | tig0043929:3647-3666 | Msa1464150:intron | 40.0% | |
| TCCCACAGAGTTATTACGTT+TGG | + | tig0043929:3652-3671 | Msa1464150:intergenic | 40.0% | |
| AAACGTAATAACTCTGTGGG+AGG | - | tig0043929:3651-3670 | Msa1464150:intron | 40.0% | |
| CTTATGCTCAAGACAAACGT+TGG | - | tig0043929:3716-3735 | Msa1464150:intron | 40.0% | |
| ! | TTTGAAGTGCAAGAGATGAG+AGG | - | tig0043929:3849-3868 | Msa1464150:intron | 40.0% |
| TGCTCATTGGACTTCTGTTT+AGG | + | tig0043929:3902-3921 | Msa1464150:intergenic | 40.0% | |
| !! | TCTGGGGTTTTCTGAATGAA+TGG | + | tig0043929:3987-4006 | Msa1464150:intergenic | 40.0% |
| ATTCATTCAGAAAACCCCAG+AGG | - | tig0043929:3986-4005 | Msa1464150:intron | 40.0% | |
| GGTTATAGAAACAAGACTGG+AGG | - | tig0043929:4195-4214 | Msa1464150:intron | 40.0% | |
| TAACAACAACCACAGCCAAT+TGG | - | tig0043929:4329-4348 | Msa1464150:intron | 40.0% | |
| TAAAGCAGATAATAGCCTCG+TGG | - | tig0043929:4609-4628 | Msa1464150:intron | 40.0% | |
| CCAAATCAACAATACGAGCA+AGG | + | tig0043929:4901-4920 | Msa1464150:intergenic | 40.0% | |
| ! | CCTTGCTCGTATTGTTGATT+TGG | - | tig0043929:4898-4917 | Msa1464150:intron | 40.0% |
| GGTTTCAGATAGGTCCTTAA+CGG | - | tig0043929:5046-5065 | Msa1464150:CDS | 40.0% | |
| CTTTCTATCAACCTCCGTTA+AGG | + | tig0043929:5063-5082 | Msa1464150:intergenic | 40.0% | |
| !! | CTTAACGGAGGTTGATAGAA+AGG | - | tig0043929:5061-5080 | Msa1464150:CDS | 40.0% |
| GAAATTTAAAGGACCCAGAG+AGG | - | tig0043929:5192-5211 | Msa1464150:intron | 40.0% | |
| !! | TGTAAAGTTTGGTGCTGGTT+TGG | - | tig0043929:5268-5287 | Msa1464150:CDS | 40.0% |
| ATCGAGCAATTTACTGACGT+TGG | - | tig0043929:5294-5313 | Msa1464150:CDS | 40.0% | |
| AAATCCATCCGTGAGCAATA+TGG | + | tig0043929:5675-5694 | Msa1464150:intergenic | 40.0% | |
| ! | TGCTCTCTTCTTTTCATCAG+TGG | - | tig0043929:5703-5722 | Msa1464150:intron | 40.0% |
| ! | GCTCTCTTCTTTTCATCAGT+GGG | - | tig0043929:5704-5723 | Msa1464150:intron | 40.0% |
| AGTCATTAACAAGGCAACTG+TGG | + | tig0043929:5835-5854 | Msa1464150:intergenic | 40.0% | |
| ATCATGCTTGCCACTAAATC+AGG | + | tig0043929:5940-5959 | Msa1464150:intergenic | 40.0% | |
| TGCTGAACGTCAAAAAACAG+CGG | - | tig0043929:5963-5982 | Msa1464150:CDS | 40.0% | |
| CAATTGCAAACATCACTTGC+AGG | - | tig0043929:5992-6011 | Msa1464150:CDS | 40.0% | |
| AACTTCCTTTCAGAACCTTC+AGG | + | tig0043929:6167-6186 | Msa1464150:intergenic | 40.0% | |
| AAGGAAGTTATAACCTCCAG+TGG | - | tig0043929:6178-6197 | Msa1464150:intron | 40.0% | |
| ATAAGAAGTTGAACCACTGG+AGG | + | tig0043929:6194-6213 | Msa1464150:intergenic | 40.0% | |
| TCCAGTGGTTCAACTTCTTA+TGG | - | tig0043929:6193-6212 | Msa1464150:intron | 40.0% | |
| TCCATAAGAAGTTGAACCAC+TGG | + | tig0043929:6197-6216 | Msa1464150:intergenic | 40.0% | |
| !! | TACTCTGAGATGTTCGAAAC+AGG | + | tig0043929:6228-6247 | Msa1464150:intergenic | 40.0% |
| GGAAGTTTACTGAAGTACAG+GGG | - | tig0043929:6321-6340 | Msa1464150:intron | 40.0% | |
| !!! | ATAGTTTTTGGTGCAGAGCT+TGG | - | tig0043929:7657-7676 | Msa1464150:intron | 40.0% |
| TAAGGAAGAGTGATGACTTC+TGG | + | tig0043929:7882-7901 | Msa1464150:intergenic | 40.0% | |
| ! | GTATTGGCATACCTCTTCTA+AGG | - | tig0043929:7911-7930 | Msa1464150:five_prime_UTR | 40.0% |
| GTTTCCAAAGTTCCTCTCTA+GGG | + | tig0043929:8050-8069 | Msa1464150:intergenic | 40.0% | |
| AGTTTCCAAAGTTCCTCTCT+AGG | + | tig0043929:8051-8070 | Msa1464150:intergenic | 40.0% | |
| TGTTGCTGGGTGAAAAAGGA+GGG | + | tig0043929:988-1007 | Msa1464150:intergenic | 45.0% | |
| TTGTTGCTGGGTGAAAAAGG+AGG | + | tig0043929:989-1008 | Msa1464150:intergenic | 45.0% | |
| ! | CAATGACGGTGTTTGTTGCT+GGG | + | tig0043929:1001-1020 | Msa1464150:intergenic | 45.0% |
| CTCATCATGACCCAGAAAAC+TGG | + | tig0043929:1771-1790 | Msa1464150:intergenic | 45.0% | |
| AATCTAGGGGACTTGTATGC+TGG | - | tig0043929:2094-2113 | Msa1464150:intron | 45.0% | |
| !! | TTGTCTTTCCACTTTGGGGT+AGG | - | tig0043929:2369-2388 | Msa1464150:intron | 45.0% |
| AAAAGTTGCCTACCCCAAAG+TGG | + | tig0043929:2380-2399 | Msa1464150:intergenic | 45.0% | |
| GAATTACCACACAAACAGCG+TGG | + | tig0043929:3030-3049 | Msa1464150:intergenic | 45.0% | |
| ATTGGGGTACAAGCTTGTGT+TGG | + | tig0043929:3436-3455 | Msa1464150:intergenic | 45.0% | |
| TGTACCCCAATCTGCAAGTT+AGG | - | tig0043929:3445-3464 | Msa1464150:intron | 45.0% | |
| TTCTGTTTAGGAGTCTCCTC+TGG | + | tig0043929:3890-3909 | Msa1464150:intergenic | 45.0% | |
| ACAGAAGTCCAATGAGCAAG+TGG | - | tig0043929:3904-3923 | Msa1464150:intron | 45.0% | |
| GCAATTTGTGGATGCACTGA+CGG | - | tig0043929:4246-4265 | Msa1464150:intron | 45.0% | |
| !! | CACAGCCAATTGGTGATGTT+GGG | - | tig0043929:4339-4358 | Msa1464150:intron | 45.0% |
| TCATAAGAGGCCTGCACTAT+AGG | + | tig0043929:4478-4497 | Msa1464150:intergenic | 45.0% | |
| AATAGCCTCGTGGAGTTTAC+AGG | - | tig0043929:4619-4638 | Msa1464150:intron | 45.0% | |
| TTGATCCTGTAAACTCCACG+AGG | + | tig0043929:4627-4646 | Msa1464150:intergenic | 45.0% | |
| ! | TGGCCCATCTGAAATTCAAC+AGG | + | tig0043929:4682-4701 | Msa1464150:intergenic | 45.0% |
| AAATGGGTCAAATACCTCCC+TGG | - | tig0043929:4946-4965 | Msa1464150:intron | 45.0% | |
| AATGGGTCAAATACCTCCCT+GGG | - | tig0043929:4947-4966 | Msa1464150:intron | 45.0% | |
| CGTGAAACTTAAAGGACCCA+GGG | + | tig0043929:4966-4985 | Msa1464150:intergenic | 45.0% | |
| ACGTGAAACTTAAAGGACCC+AGG | + | tig0043929:4967-4986 | Msa1464150:intergenic | 45.0% | |
| TTCAGATAGGTCCTTAACGG+AGG | - | tig0043929:5049-5068 | Msa1464150:CDS | 45.0% | |
| !! | AAAGGACCCAGAGAGGTATT+TGG | - | tig0043929:5199-5218 | Msa1464150:intron | 45.0% |
| CATTGGCCAAATACCTCTCT+GGG | + | tig0043929:5208-5227 | Msa1464150:intergenic | 45.0% | |
| TCATTGGCCAAATACCTCTC+TGG | + | tig0043929:5209-5228 | Msa1464150:intergenic | 45.0% | |
| AGTTTACTGAAGTACAGGGG+CGG | - | tig0043929:6324-6343 | Msa1464150:intron | 45.0% | |
| CTGGACTCTCGATATTAGTG+AGG | - | tig0043929:6349-6368 | Msa1464150:intron | 45.0% | |
| CTGCTGACATACTTCAGCAT+GGG | + | tig0043929:7014-7033 | Msa1464150:intergenic | 45.0% | |
| TCTGCTGACATACTTCAGCA+TGG | + | tig0043929:7015-7034 | Msa1464150:intergenic | 45.0% | |
| !! | ATGTTGGCATTGGTGTTCCA+TGG | - | tig0043929:7499-7518 | Msa1464150:intron | 45.0% |
| CTCTCCGAATCCAAAATGCA+GGG | - | tig0043929:7562-7581 | Msa1464150:intron | 45.0% | |
| TCTCCGAATCCAAAATGCAG+GGG | - | tig0043929:7563-7582 | Msa1464150:intron | 45.0% | |
| TGAGATACATCCAACGGAAG+TGG | + | tig0043929:7619-7638 | Msa1464150:intergenic | 45.0% | |
| ! | AGAGTGATGACTTCTGGAGA+GGG | + | tig0043929:7876-7895 | Msa1464150:intergenic | 45.0% |
| ! | AAGAGTGATGACTTCTGGAG+AGG | + | tig0043929:7877-7896 | Msa1464150:intergenic | 45.0% |
| TTCCTTAGTCCCTCGTGTAT+TGG | - | tig0043929:7895-7914 | Msa1464150:five_prime_UTR | 45.0% | |
| ! | AGAGGTATGCCAATACACGA+GGG | + | tig0043929:7907-7926 | Msa1464150:intergenic | 45.0% |
| ! | AAGAGGTATGCCAATACACG+AGG | + | tig0043929:7908-7927 | Msa1464150:intergenic | 45.0% |
| TTCACCCTAGAGAGGAACTT+TGG | - | tig0043929:8043-8062 | Msa1464150:five_prime_UTR | 45.0% | |
| !! | ATTTGAATTATAAATTTATA+TGG | - | tig0043929:5371-5390 | Msa1464150:intron | 5.0% |
| !! | TTTGAATTATAAATTTATAT+GGG | - | tig0043929:5372-5391 | Msa1464150:intron | 5.0% |
| !! | ATGTATATAAATTAAAAAAA+TGG | - | tig0043929:6754-6773 | Msa1464150:intron | 5.0% |
| GTTGCTGGGTGAAAAAGGAG+GGG | + | tig0043929:987-1006 | Msa1464150:intergenic | 50.0% | |
| ! | GCAATGACGGTGTTTGTTGC+TGG | + | tig0043929:1002-1021 | Msa1464150:intergenic | 50.0% |
| ACAAACACCGTCATTGCCAC+CGG | - | tig0043929:1005-1024 | Msa1464150:three_prime_UTR | 50.0% | |
| TGTGGTCAAGCATTCAAGGG+AGG | - | tig0043929:1931-1950 | Msa1464150:intron | 50.0% | |
| CAAGCATTCAAGGGAGGTTG+TGG | - | tig0043929:1937-1956 | Msa1464150:intron | 50.0% | |
| ACCACACAAACAGCGTGGAT+GGG | + | tig0043929:3025-3044 | Msa1464150:intergenic | 50.0% | |
| TACCACACAAACAGCGTGGA+TGG | + | tig0043929:3026-3045 | Msa1464150:intergenic | 50.0% | |
| ! | AGAGCACTCCACTTGCTCAT+TGG | + | tig0043929:3915-3934 | Msa1464150:intergenic | 50.0% |
| AAGGTGGAACAGCTACCTCT+GGG | + | tig0043929:4004-4023 | Msa1464150:intergenic | 50.0% | |
| TAAGGTGGAACAGCTACCTC+TGG | + | tig0043929:4005-4024 | Msa1464150:intergenic | 50.0% | |
| CCAACATCACCAATTGGCTG+TGG | + | tig0043929:4341-4360 | Msa1464150:intergenic | 50.0% | |
| !! | CCACAGCCAATTGGTGATGT+TGG | - | tig0043929:4338-4357 | Msa1464150:intron | 50.0% |
| TGAAGGCTTGCCTATAGTGC+AGG | - | tig0043929:4465-4484 | Msa1464150:intron | 50.0% | |
| GAAACTTAAAGGACCCAGGG+AGG | + | tig0043929:4963-4982 | Msa1464150:intergenic | 50.0% | |
| ! | TCCGCATGGCTCGAATTTTC+TGG | - | tig0043929:5599-5618 | Msa1464150:intron | 50.0% |
| GCCAGAAAATTCGAGCCATG+CGG | + | tig0043929:5603-5622 | Msa1464150:intergenic | 50.0% | |
| !!! | GGCAGCTGTTACTTTTACCG+TGG | - | tig0043929:5620-5639 | Msa1464150:intron | 50.0% |
| ATCCGTGAGCAATATGGCAC+GGG | + | tig0043929:5669-5688 | Msa1464150:intergenic | 50.0% | |
| CATCCGTGAGCAATATGGCA+CGG | + | tig0043929:5670-5689 | Msa1464150:intergenic | 50.0% | |
| GACCTCATGGCCTGATTTAG+TGG | - | tig0043929:5927-5946 | Msa1464150:CDS | 50.0% | |
| TGCCACTAAATCAGGCCATG+AGG | + | tig0043929:5932-5951 | Msa1464150:intergenic | 50.0% | |
| AGGATACCCGTGCATACAGA+CGG | - | tig0043929:6569-6588 | Msa1464150:intron | 50.0% | |
| AAGATGGACCTAGGCTACTG+TGG | - | tig0043929:6957-6976 | Msa1464150:CDS | 50.0% | |
| CTGACATACTTCAGCATGGG+CGG | + | tig0043929:7011-7030 | Msa1464150:intergenic | 50.0% | |
| ! | CCTGCATTTTGGATTCGGAG+AGG | + | tig0043929:7564-7583 | Msa1464150:intergenic | 50.0% |
| CCTCTCCGAATCCAAAATGC+AGG | - | tig0043929:7561-7580 | Msa1464150:intron | 50.0% | |
| CTCCGAATCCAAAATGCAGG+GGG | - | tig0043929:7564-7583 | Msa1464150:intron | 50.0% | |
| ! | GTCCCCCTGCATTTTGGATT+CGG | + | tig0043929:7569-7588 | Msa1464150:intergenic | 50.0% |
| ! | AGCTAAGTCCCCCTGCATTT+TGG | + | tig0043929:7575-7594 | Msa1464150:intergenic | 50.0% |
| ! | GTTTTCTTCGCCACTTCCGT+TGG | - | tig0043929:7606-7625 | Msa1464150:intron | 50.0% |
| !!! | GTTTTTGGTGCAGAGCTTGG+AGG | - | tig0043929:7660-7679 | Msa1464150:intron | 50.0% |
| AGCTTGGAGGACCAAGACTT+TGG | - | tig0043929:7673-7692 | Msa1464150:intron | 50.0% | |
| GCTTGGAGGACCAAGACTTT+GGG | - | tig0043929:7674-7693 | Msa1464150:intron | 50.0% | |
| AGGACCAAGACTTTGGGCAT+GGG | - | tig0043929:7680-7699 | Msa1464150:intron | 50.0% | |
| GTAACCCATGCCCAAAGTCT+TGG | + | tig0043929:7687-7706 | Msa1464150:intergenic | 50.0% | |
| CAGCAGCATGAAAAACGCAC+AGG | + | tig0043929:7709-7728 | Msa1464150:intergenic | 50.0% | |
| ! | GTGCGTTTTTCATGCTGCTG+TGG | - | tig0043929:7709-7728 | Msa1464150:intron | 50.0% |
| TGCCAATACACGAGGGACTA+AGG | + | tig0043929:7900-7919 | Msa1464150:intergenic | 50.0% | |
| GAATTCGCCGGTGGCAATGA+CGG | + | tig0043929:1015-1034 | Msa1464150:intergenic | 55.0% | |
| TGGAGACTTACCGGCGAAGA+TGG | + | tig0043929:1037-1056 | Msa1464150:intergenic | 55.0% | |
| CTAGGGGACTTGTATGCTGG+AGG | - | tig0043929:2097-2116 | Msa1464150:intron | 55.0% | |
| TTGGGACCTGGAACACTCGT+TGG | - | tig0043929:2977-2996 | Msa1464150:intron | 55.0% | |
| GCAGAACCAACGAGTGTTCC+AGG | + | tig0043929:2986-3005 | Msa1464150:intergenic | 55.0% | |
| CCACACAAACAGCGTGGATG+GGG | + | tig0043929:3024-3043 | Msa1464150:intergenic | 55.0% | |
| TGCAAGAGATGAGAGGCCAG+AGG | - | tig0043929:3856-3875 | Msa1464150:intron | 55.0% | |
| AGATGAGAGGCCAGAGGACT+GGG | - | tig0043929:3862-3881 | Msa1464150:intron | 55.0% | |
| AGGTGGAACAGCTACCTCTG+GGG | + | tig0043929:4003-4022 | Msa1464150:intergenic | 55.0% | |
| GCGAGCCCAACATCACCAAT+TGG | + | tig0043929:4347-4366 | Msa1464150:intergenic | 55.0% | |
| TCCGTGAGCAATATGGCACG+GGG | + | tig0043929:5668-5687 | Msa1464150:intergenic | 55.0% | |
| CGTGCCATATTGCTCACGGA+TGG | - | tig0043929:5668-5687 | Msa1464150:intron | 55.0% | |
| GGATACCCGTGCATACAGAC+GGG | - | tig0043929:6570-6589 | Msa1464150:intron | 55.0% | |
| ! | TGCCACAGTGTGCCTTGTTG+AGG | - | tig0043929:6984-7003 | Msa1464150:CDS | 55.0% |
| GACCTCAACAAGGCACACTG+TGG | + | tig0043929:6989-7008 | Msa1464150:intergenic | 55.0% | |
| GAGGACCAAGACTTTGGGCA+TGG | - | tig0043929:7679-7698 | Msa1464150:intron | 55.0% | |
| GCGAAGATGGAATTCGCCGG+TGG | + | tig0043929:1024-1043 | Msa1464150:intergenic | 60.0% | |
| CCGGCGAAGATGGAATTCGC+CGG | + | tig0043929:1027-1046 | Msa1464150:intergenic | 60.0% | |
| CCGGCGAATTCCATCTTCGC+CGG | - | tig0043929:1024-1043 | Msa1464150:three_prime_UTR | 60.0% | |
| CCCCATCCACGCTGTTTGTG+TGG | - | tig0043929:3021-3040 | Msa1464150:CDS | 60.0% | |
| GAGATGAGAGGCCAGAGGAC+TGG | - | tig0043929:3861-3880 | Msa1464150:intron | 60.0% | |
| CCGTGAGCAATATGGCACGG+GGG | + | tig0043929:5667-5686 | Msa1464150:intergenic | 60.0% | |
| CCCCCGTGCCATATTGCTCA+CGG | - | tig0043929:5664-5683 | Msa1464150:intron | 60.0% | |
| CACTAGCCAGTGGGACCTCA+TGG | - | tig0043929:5914-5933 | Msa1464150:CDS | 60.0% | |
| ATCAGGCCATGAGGTCCCAC+TGG | + | tig0043929:5923-5942 | Msa1464150:intergenic | 60.0% | |
| CTGAAGTACAGGGGCGGATC+TGG | - | tig0043929:6330-6349 | Msa1464150:intron | 60.0% | |
| GCTCACCCGTCTGTATGCAC+GGG | + | tig0043929:6578-6597 | Msa1464150:intergenic | 60.0% | |
| CGCTCACCCGTCTGTATGCA+CGG | + | tig0043929:6579-6598 | Msa1464150:intergenic | 60.0% | |
| GGCAAGTGCCACAGTAGCCT+AGG | + | tig0043929:6968-6987 | Msa1464150:intergenic | 60.0% | |
| AGCATGGGCGGACCTCAACA+AGG | + | tig0043929:6999-7018 | Msa1464150:intergenic | 60.0% | |
| !! | GACTTCTGGAGAGGGCACCT+AGG | + | tig0043929:7868-7887 | Msa1464150:intergenic | 60.0% |
| TCCTCTGGCACCCAGTCCTC+TGG | + | tig0043929:3875-3894 | Msa1464150:intergenic | 65.0% | |
| GCCAGAGGACTGGGTGCCAG+AGG | - | tig0043929:3871-3890 | Msa1464150:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0043929 | gene | 914 | 8086 | 914 | ID=Msa1464150;Name=Msa1464150 |
| tig0043929 | mRNA | 914 | 8086 | 914 | ID=Msa1464150-mRNA-1;Parent=Msa1464150;Name=Msa1464150-mRNA-1;_AED=0.09;_eAED=0.09;_QI=365|1|1|1|0.87|0.77|9|307|509 |
| tig0043929 | exon | 914 | 1518 | 914 | ID=Msa1464150-mRNA-1:exon:24323;Parent=Msa1464150-mRNA-1 |
| tig0043929 | exon | 2987 | 3116 | 2987 | ID=Msa1464150-mRNA-1:exon:24322;Parent=Msa1464150-mRNA-1 |
| tig0043929 | exon | 3225 | 3441 | 3225 | ID=Msa1464150-mRNA-1:exon:24321;Parent=Msa1464150-mRNA-1 |
| tig0043929 | exon | 4733 | 4857 | 4733 | ID=Msa1464150-mRNA-1:exon:24320;Parent=Msa1464150-mRNA-1 |
| tig0043929 | exon | 4993 | 5144 | 4993 | ID=Msa1464150-mRNA-1:exon:24319;Parent=Msa1464150-mRNA-1 |
| tig0043929 | exon | 5242 | 5360 | 5242 | ID=Msa1464150-mRNA-1:exon:24318;Parent=Msa1464150-mRNA-1 |
| tig0043929 | exon | 5913 | 6025 | 5913 | ID=Msa1464150-mRNA-1:exon:24317;Parent=Msa1464150-mRNA-1 |
| tig0043929 | exon | 6882 | 7349 | 6882 | ID=Msa1464150-mRNA-1:exon:24316;Parent=Msa1464150-mRNA-1 |
| tig0043929 | exon | 7814 | 8086 | 7814 | ID=Msa1464150-mRNA-1:exon:24315;Parent=Msa1464150-mRNA-1 |
| tig0043929 | five_prime_UTR | 7814 | 8086 | 7814 | ID=Msa1464150-mRNA-1:five_prime_utr;Parent=Msa1464150-mRNA-1 |
| tig0043929 | five_prime_UTR | 7258 | 7349 | 7258 | ID=Msa1464150-mRNA-1:five_prime_utr;Parent=Msa1464150-mRNA-1 |
| tig0043929 | CDS | 6882 | 7257 | 6882 | ID=Msa1464150-mRNA-1:cds;Parent=Msa1464150-mRNA-1 |
| tig0043929 | CDS | 5913 | 6025 | 5913 | ID=Msa1464150-mRNA-1:cds;Parent=Msa1464150-mRNA-1 |
| tig0043929 | CDS | 5242 | 5360 | 5242 | ID=Msa1464150-mRNA-1:cds;Parent=Msa1464150-mRNA-1 |
| tig0043929 | CDS | 4993 | 5144 | 4993 | ID=Msa1464150-mRNA-1:cds;Parent=Msa1464150-mRNA-1 |
| tig0043929 | CDS | 4733 | 4857 | 4733 | ID=Msa1464150-mRNA-1:cds;Parent=Msa1464150-mRNA-1 |
| tig0043929 | CDS | 3225 | 3441 | 3225 | ID=Msa1464150-mRNA-1:cds;Parent=Msa1464150-mRNA-1 |
| tig0043929 | CDS | 2987 | 3116 | 2987 | ID=Msa1464150-mRNA-1:cds;Parent=Msa1464150-mRNA-1 |
| tig0043929 | CDS | 1221 | 1518 | 1221 | ID=Msa1464150-mRNA-1:cds;Parent=Msa1464150-mRNA-1 |
| tig0043929 | three_prime_UTR | 914 | 1220 | 914 | ID=Msa1464150-mRNA-1:three_prime_utr;Parent=Msa1464150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
