Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1379740 | XP_003591515.1 | 92.830 | 530 | 17 | 1 | 1 | 509 | 1 | 530 | 0.0 | 998 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1379740 | sp|O22252|MHX_ARATH | 67.045 | 528 | 144 | 5 | 9 | 509 | 15 | 539 | 0.0 | 721 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1379740 | G7IF47 | 92.830 | 530 | 17 | 1 | 1 | 509 | 1 | 530 | 0.0 | 998 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1379740 | Msa1447150 | 0.800052 | 1.726605e-48 | -8.615850e-47 |
| Msa1379740 | Msa1464150 | 0.922265 | 1.230840e-88 | -8.615850e-47 |
| Msa0128850 | Msa1379740 | 0.844594 | 6.862030e-59 | -8.615850e-47 |
| Msa1074530 | Msa1379740 | 0.807487 | 4.935133e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1379740 | MtrunA17_Chr1g0195461 | 92.830 | 530 | 17 | 1 | 1 | 509 | 1 | 530 | 0.0 | 998 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1379740 | AT2G47600.1 | 67.045 | 528 | 144 | 5 | 9 | 509 | 15 | 539 | 0.0 | 721 |
Find 142 sgRNAs with CRISPR-Local
Find 397 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACATAACTGATCTGAAATTT+TGG | 0.162293 | tig0020311:-5951 | Msa1379740:five_prime_UTR |
| ATACATATTTGCTTACTATT+TGG | 0.181267 | tig0020311:-3412 | Msa1379740:CDS |
| ACTTTGGAAACTATTGTTTA+TGG | 0.190902 | tig0020311:-515 | Msa1379740:three_prime_UTR |
| GGTCTGTATAATACAAATTA+AGG | 0.196530 | tig0020311:+787 | None:intergenic |
| CTATCTTCTCTTAAGGTTTC+CGG | 0.198106 | tig0020311:-847 | Msa1379740:CDS |
| ATCCCGGTTCTTTCAATCTA+TGG | 0.213459 | tig0020311:-5725 | Msa1379740:CDS |
| TTATTAAACATGAGAAAGTT+TGG | 0.272245 | tig0020311:-5642 | Msa1379740:CDS |
| ATAATCTCAGCTTTAGTAAC+AGG | 0.276976 | tig0020311:+5661 | None:intergenic |
| GCAATGACGGTGTTTGTTGC+TGG | 0.288678 | tig0020311:+6622 | None:intergenic |
| ATATCAGGTGATGTTATCTT+TGG | 0.290310 | tig0020311:-5984 | Msa1379740:intron |
| AATTGCAGATATTAGTCTTT+TGG | 0.292179 | tig0020311:-5611 | Msa1379740:CDS |
| TTGATGCTATACGGAATATA+GGG | 0.304602 | tig0020311:-5549 | Msa1379740:CDS |
| TTCTGTTTAGGAGTCTCTTC+TGG | 0.305636 | tig0020311:+3743 | None:intergenic |
| CAATTGCAAACATCACTTGC+AGG | 0.310992 | tig0020311:-1920 | Msa1379740:intron |
| TGTTGTACTATCTTCTCTTA+AGG | 0.316583 | tig0020311:-854 | Msa1379740:CDS |
| ATTGATGCTATACGGAATAT+AGG | 0.323354 | tig0020311:-5550 | Msa1379740:CDS |
| TAAGGAAGAGTGATGACTTC+TGG | 0.333268 | tig0020311:+715 | None:intergenic |
| GTTGTATTATGTATAGTATA+TGG | 0.339524 | tig0020311:-754 | Msa1379740:three_prime_UTR |
| ATACATAGGTAGAGAAATAT+AGG | 0.349225 | tig0020311:+3890 | None:intergenic |
| TGCTCATTGGACTTCTGTTT+AGG | 0.350292 | tig0020311:+3731 | None:intergenic |
| CAATTTGATTGGAGACTTAC+CGG | 0.353350 | tig0020311:+6578 | None:intergenic |
| GACAGAAGACAGAAACAAAC+TGG | 0.355547 | tig0020311:-6712 | Msa1379740:five_prime_UTR |
| TCCCACAGAGTTATTACGTT+TGG | 0.361503 | tig0020311:+3981 | None:intergenic |
| TTCCTTAGTCCCTCGTGTAT+TGG | 0.368361 | tig0020311:-699 | Msa1379740:three_prime_UTR |
| GTATTGGCATACCTCTTCTA+AGG | 0.369504 | tig0020311:-683 | Msa1379740:three_prime_UTR |
| GCAGAACCAACGAGTGTTCC+AGG | 0.370899 | tig0020311:+4647 | None:intergenic |
| GAGAGGGAAAACAATTTGAT+TGG | 0.375241 | tig0020311:+6567 | None:intergenic |
| ATCATGCTTGCCACTAAATC+AGG | 0.376042 | tig0020311:+1975 | None:intergenic |
| CTCATCATGACCCAGAAAAC+TGG | 0.377169 | tig0020311:+5861 | None:intergenic |
| ACCTAAAATAATTGTGCATA+AGG | 0.381520 | tig0020311:+6455 | None:intergenic |
| CATCTCTTGGAAATAGTGTT+AGG | 0.383494 | tig0020311:-5804 | Msa1379740:CDS |
| TGTTTGTTGCTGGGTGAAAA+AGG | 0.386200 | tig0020311:+6632 | None:intergenic |
| AGCTTGGAGGACCAAGACTT+TGG | 0.399701 | tig0020311:-921 | Msa1379740:CDS |
| GAGATGAGAGGCCAGAGGAC+TGG | 0.400303 | tig0020311:-3769 | Msa1379740:CDS |
| TTGTTGACAGTACTTCAGTA+TGG | 0.402969 | tig0020311:-3954 | Msa1379740:CDS |
| AAATCCATCCGTGAGCAATA+TGG | 0.403168 | tig0020311:+2240 | None:intergenic |
| AGATGAGAGGCCAGAGGACT+GGG | 0.404824 | tig0020311:-3768 | Msa1379740:CDS |
| AGAGCACTCCACTTGCTCAT+TGG | 0.407702 | tig0020311:+3718 | None:intergenic |
| ACATAATACAACAATGGATA+AGG | 0.408035 | tig0020311:+765 | None:intergenic |
| TAGCTACTATTGATGCTATA+CGG | 0.408093 | tig0020311:-5558 | Msa1379740:CDS |
| TTCTCCCTAGAGAGGAACTT+TGG | 0.417023 | tig0020311:-531 | Msa1379740:three_prime_UTR |
| TCTTCTGGCACCCAGTCCTC+TGG | 0.419339 | tig0020311:+3758 | None:intergenic |
| GACCTCATGGCCTGATTTAG+TGG | 0.424047 | tig0020311:-1985 | Msa1379740:CDS |
| TGCCAAATCCAAGTAGCAAA+AGG | 0.426022 | tig0020311:+5916 | None:intergenic |
| TTTCCATAGATTGAAAGAAC+CGG | 0.427654 | tig0020311:+5722 | None:intergenic |
| AGTTTCCAAAGTTCCTCTCT+AGG | 0.444295 | tig0020311:+526 | None:intergenic |
| TGGAGACTTACCGGCGAAGA+TGG | 0.447611 | tig0020311:+6587 | None:intergenic |
| CATAATACAACAATGGATAA+GGG | 0.459605 | tig0020311:+766 | None:intergenic |
| GCTTGGAGGACCAAGACTTT+GGG | 0.459664 | tig0020311:-920 | Msa1379740:CDS |
| GAATTTAGAATTGAAAATTG+AGG | 0.464057 | tig0020311:+6500 | None:intergenic |
| AATTTAGAATTGAAAATTGA+GGG | 0.466104 | tig0020311:+6501 | None:intergenic |
| AATACAATTCTAAATGAATC+CGG | 0.467656 | tig0020311:+828 | None:intergenic |
| GTCTGTATAATACAAATTAA+GGG | 0.472461 | tig0020311:+788 | None:intergenic |
| CAATGACGGTGTTTGTTGCT+GGG | 0.473628 | tig0020311:+6623 | None:intergenic |
| TGGAAACTATTGTTTATGGC+TGG | 0.476306 | tig0020311:-511 | Msa1379740:three_prime_UTR |
| CACTAGCCAGTGGGACCTCA+TGG | 0.480616 | tig0020311:-1998 | Msa1379740:CDS |
| TACATAGGTAGAGAAATATA+GGG | 0.482391 | tig0020311:+3891 | None:intergenic |
| ATGTATAGTATATGGTTCCT+AGG | 0.486712 | tig0020311:-746 | Msa1379740:three_prime_UTR |
| CAAGCATTCAAGGGAGGTTG+TGG | 0.489055 | tig0020311:-5692 | Msa1379740:CDS |
| TTTAGTGGAGAAACATCTCT+TGG | 0.489986 | tig0020311:-5817 | Msa1379740:CDS |
| TGCCAATACACGAGGGACTA+AGG | 0.491425 | tig0020311:+697 | None:intergenic |
| AATATAGGGGACTTGTATGC+TGG | 0.493994 | tig0020311:-5535 | Msa1379740:CDS |
| TACCACACAAACAGCGTGGA+TGG | 0.500886 | tig0020311:+4607 | None:intergenic |
| GATCTTATAAGTTGTGTCAC+AGG | 0.501702 | tig0020311:-2158 | Msa1379740:intron |
| CCTCTCCGAATCCAAAATGC+AGG | 0.501742 | tig0020311:-1033 | Msa1379740:CDS |
| ATCCGTGAGCAATATGGCAC+GGG | 0.508022 | tig0020311:+2246 | None:intergenic |
| TATTTGGAGACAGCAATTTG+TGG | 0.508898 | tig0020311:-3396 | Msa1379740:CDS |
| GCCAAATCCAAGTAGCAAAA+GGG | 0.513444 | tig0020311:+5917 | None:intergenic |
| GAGGACCAAGACTTTGGGCA+TGG | 0.513831 | tig0020311:-915 | Msa1379740:CDS |
| TAATATTTAGGTTTGGGACC+TGG | 0.520382 | tig0020311:-4665 | Msa1379740:intron |
| TTGAATTGATAGAGCAGAGA+GGG | 0.522746 | tig0020311:+6551 | None:intergenic |
| GTTTCCAAAGTTCCTCTCTA+GGG | 0.524633 | tig0020311:+527 | None:intergenic |
| AAAATGTGGTCAAGCATTCA+AGG | 0.527731 | tig0020311:-5702 | Msa1379740:CDS |
| TTACATTGTGACTAAGATAA+CGG | 0.532903 | tig0020311:-2180 | Msa1379740:CDS |
| ATCAGGCCATGAGGTCCCAC+TGG | 0.534624 | tig0020311:+1992 | None:intergenic |
| TTCCATAGATTGAAAGAACC+GGG | 0.535724 | tig0020311:+5723 | None:intergenic |
| ATGTTGGCATTGGTGTTCCA+TGG | 0.536328 | tig0020311:-1095 | Msa1379740:CDS |
| GTAACCCATGCCCAAAGTCT+TGG | 0.537079 | tig0020311:+910 | None:intergenic |
| CCACACAAACAGCGTGGATG+GGG | 0.537126 | tig0020311:+4609 | None:intergenic |
| ACCACACAAACAGCGTGGAT+GGG | 0.540101 | tig0020311:+4608 | None:intergenic |
| CCCCATCCACGCTGTTTGTG+TGG | 0.540973 | tig0020311:-4609 | Msa1379740:CDS |
| CTTTCAATCTATGGAAAATG+TGG | 0.541423 | tig0020311:-5716 | Msa1379740:CDS |
| GAATTCGCCGGTGGCAATGA+CGG | 0.549191 | tig0020311:+6609 | None:intergenic |
| TGAGATACATCCAACGGAAG+TGG | 0.554803 | tig0020311:+978 | None:intergenic |
| CAAGGTTATAGAAACAAGAC+TGG | 0.557010 | tig0020311:-3438 | Msa1379740:CDS |
| AGGACCAAGACTTTGGGCAT+GGG | 0.560608 | tig0020311:-914 | Msa1379740:CDS |
| TGTGTGGTAATTCCAAAAGC+AGG | 0.563593 | tig0020311:-4593 | Msa1379740:CDS |
| AGAGTGATGACTTCTGGAGA+GGG | 0.568361 | tig0020311:+721 | None:intergenic |
| AGAACGTGTTTACATTTGCA+TGG | 0.570750 | tig0020311:+6686 | None:intergenic |
| TTTAGAATTGAAAATTGAGG+GGG | 0.573797 | tig0020311:+6503 | None:intergenic |
| ACAAACACCGTCATTGCCAC+CGG | 0.574351 | tig0020311:-6616 | Msa1379740:five_prime_UTR |
| CGTGCCATATTGCTCACGGA+TGG | 0.575588 | tig0020311:-2244 | Msa1379740:CDS |
| TACAAAGTATCTATAAGCCA+TGG | 0.575688 | tig0020311:+1078 | None:intergenic |
| CCGGCGAATTCCATCTTCGC+CGG | 0.580070 | tig0020311:-6597 | Msa1379740:five_prime_UTR |
| ACAGAAGTCCAATGAGCAAG+TGG | 0.582888 | tig0020311:-3726 | Msa1379740:CDS |
| GTGAACATATATGTTGGCAT+TGG | 0.584692 | tig0020311:-1105 | Msa1379740:CDS |
| CTCTCCGAATCCAAAATGCA+GGG | 0.585004 | tig0020311:-1032 | Msa1379740:CDS |
| AATTCAGTGAACATATATGT+TGG | 0.588017 | tig0020311:-1111 | Msa1379740:CDS |
| GATTATCGGCTATAACATCC+CGG | 0.597399 | tig0020311:-5741 | Msa1379740:CDS |
| ATTAAATCTTCTCCCTAGAG+AGG | 0.598371 | tig0020311:-539 | Msa1379740:three_prime_UTR |
| TACTATACATAATACAACAA+TGG | 0.599493 | tig0020311:+759 | None:intergenic |
| TTGGGACCTGGAACACTCGT+TGG | 0.601934 | tig0020311:-4653 | Msa1379740:CDS |
| CATCCGTGAGCAATATGGCA+CGG | 0.604119 | tig0020311:+2245 | None:intergenic |
| GCAATTTGTGGATGCACTGA+CGG | 0.607292 | tig0020311:-3384 | Msa1379740:intron |
| ATAGTAGCTAATGAAATCTG+AGG | 0.608171 | tig0020311:+5571 | None:intergenic |
| ATTTAGAATTGAAAATTGAG+GGG | 0.612355 | tig0020311:+6502 | None:intergenic |
| GAACAATATCTATATCCGCA+TGG | 0.616505 | tig0020311:-2327 | Msa1379740:CDS |
| CATTTACAGCACTAGCCAGT+GGG | 0.620095 | tig0020311:-2007 | Msa1379740:CDS |
| ATAGGGGACTTGTATGCTGG+AGG | 0.621724 | tig0020311:-5532 | Msa1379740:intron |
| ATTGTGCATAAGGCAAGTTG+TGG | 0.626035 | tig0020311:+6465 | None:intergenic |
| AAGAGTGATGACTTCTGGAG+AGG | 0.626377 | tig0020311:+720 | None:intergenic |
| CCGGCGAAGATGGAATTCGC+CGG | 0.627878 | tig0020311:+6597 | None:intergenic |
| CTCCAAACGTAATAACTCTG+TGG | 0.633255 | tig0020311:-3983 | Msa1379740:CDS |
| TCCAAACGTAATAACTCTGT+GGG | 0.636007 | tig0020311:-3982 | Msa1379740:CDS |
| GCATTTACAGCACTAGCCAG+TGG | 0.639064 | tig0020311:-2008 | Msa1379740:CDS |
| GACTTCTGGAGAGGGCACCT+AGG | 0.639315 | tig0020311:+729 | None:intergenic |
| AAATGTGGTCAAGCATTCAA+GGG | 0.639474 | tig0020311:-5701 | Msa1379740:CDS |
| CTCCGAATCCAAAATGCAGG+GGG | 0.644346 | tig0020311:-1030 | Msa1379740:CDS |
| TGATGCTATACGGAATATAG+GGG | 0.650824 | tig0020311:-5548 | Msa1379740:CDS |
| TTTGAAGTGCAAGAGATGAG+AGG | 0.653443 | tig0020311:-3781 | Msa1379740:intron |
| ATTGAATTGATAGAGCAGAG+AGG | 0.661520 | tig0020311:+6550 | None:intergenic |
| TGCAAGAGATGAGAGGCCAG+AGG | 0.661620 | tig0020311:-3774 | Msa1379740:CDS |
| CTTATGCTCAAGACAAACGT+TGG | 0.664142 | tig0020311:-3914 | Msa1379740:CDS |
| GCGAAGATGGAATTCGCCGG+TGG | 0.665334 | tig0020311:+6600 | None:intergenic |
| AAAGCGAACATAAATCTCCA+CGG | 0.667049 | tig0020311:+2275 | None:intergenic |
| TGATGCAGAAAATTCTGACA+AGG | 0.670071 | tig0020311:-3456 | Msa1379740:CDS |
| CAAAACTGAGATACATCCAA+CGG | 0.671625 | tig0020311:+972 | None:intergenic |
| TCTCCGAATCCAAAATGCAG+GGG | 0.673864 | tig0020311:-1031 | Msa1379740:CDS |
| TGCCACTAAATCAGGCCATG+AGG | 0.674005 | tig0020311:+1983 | None:intergenic |
| GGTTATAGAAACAAGACTGG+AGG | 0.674995 | tig0020311:-3435 | Msa1379740:CDS |
| AAACGTAATAACTCTGTGGG+AGG | 0.682559 | tig0020311:-3979 | Msa1379740:CDS |
| AAGAGGTATGCCAATACACG+AGG | 0.689617 | tig0020311:+689 | None:intergenic |
| ATACTGAAGTACTGTCAACA+AGG | 0.696254 | tig0020311:+3956 | None:intergenic |
| TGTGGTCAAGCATTCAAGGG+AGG | 0.696613 | tig0020311:-5698 | Msa1379740:CDS |
| GCCAGAAAATTCGAGCCATG+CGG | 0.701112 | tig0020311:+2312 | None:intergenic |
| TCCGTGAGCAATATGGCACG+GGG | 0.703400 | tig0020311:+2247 | None:intergenic |
| ACAGAAGACAGAAACAAACT+GGG | 0.703734 | tig0020311:-6711 | Msa1379740:five_prime_UTR |
| GAATTACCACACAAACAGCG+TGG | 0.704440 | tig0020311:+4603 | None:intergenic |
| AGAGGTATGCCAATACACGA+GGG | 0.724082 | tig0020311:+690 | None:intergenic |
| AGGTGGAACAGCTACCTCTG+GGG | 0.738813 | tig0020311:+3630 | None:intergenic |
| ATTCATTCAGAAAACCCCAG+AGG | 0.754168 | tig0020311:-3644 | Msa1379740:intron |
| CCGTGAGCAATATGGCACGG+GGG | 0.777065 | tig0020311:+2248 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAATTAAT+TGG | + | tig0020311:1015-1034 | None:intergenic | 0.0% |
| !!! | TTAAAATATTAGTTTTCAAA+AGG | - | tig0020311:1101-1120 | Msa1379740:CDS | 10.0% |
| !!! | TATAGAAAAATAGATTTTAA+AGG | - | tig0020311:2254-2273 | Msa1379740:CDS | 10.0% |
| !! | AATTCATTTATAAAATGAAA+AGG | + | tig0020311:4115-4134 | None:intergenic | 10.0% |
| !! | TTGAATTATAAATTTATATG+GGG | - | tig0020311:4684-4703 | Msa1379740:intron | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | tig0020311:6575-6594 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | tig0020311:6575-6594 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | tig0020311:6575-6594 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | tig0020311:6575-6594 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | tig0020311:6575-6594 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | tig0020311:6575-6594 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | tig0020311:6575-6594 | None:intergenic | 100.0% |
| !!! | AATTTAGAATTGAAAATTGA+GGG | + | tig0020311:725-744 | None:intergenic | 15.0% |
| !! | AGAAAAATGTATAAAATGAT+TGG | - | tig0020311:1331-1350 | Msa1379740:intron | 15.0% |
| !! | GAAAAATGTATAAAATGATT+GGG | - | tig0020311:1332-1351 | Msa1379740:intron | 15.0% |
| !!! | AATTGCTTTTTATATTTTGA+GGG | - | tig0020311:2485-2504 | Msa1379740:intron | 15.0% |
| !!! | ATGTTTAAACTTTAAAACAA+AGG | + | tig0020311:2763-2782 | None:intergenic | 15.0% |
| !!! | AAACTTTTAAATACTTCTAA+TGG | + | tig0020311:3113-3132 | None:intergenic | 15.0% |
| !!! | AATCATTTTAATGAAGAAAA+CGG | - | tig0020311:3534-3553 | Msa1379740:intron | 15.0% |
| !! | TAAAAAAACAATGTAAAGTT+TGG | - | tig0020311:4568-4587 | Msa1379740:CDS | 15.0% |
| !! | TTAATAGTTACCAAAATTTA+TGG | - | tig0020311:5420-5439 | Msa1379740:intron | 15.0% |
| !! | AGAGTAACTAAAAATAAATT+TGG | - | tig0020311:5558-5577 | Msa1379740:CDS | 15.0% |
| !!! | CTATATGTAAGTTATTTTAT+TGG | - | tig0020311:6008-6027 | Msa1379740:intron | 15.0% |
| !! | TATGTAATACAATAAAATAG+GGG | + | tig0020311:6603-6622 | None:intergenic | 15.0% |
| !! | GTATGTAATACAATAAAATA+GGG | + | tig0020311:6604-6623 | None:intergenic | 15.0% |
| !! | AGTATGTAATACAATAAAAT+AGG | + | tig0020311:6605-6624 | None:intergenic | 15.0% |
| !!! | CATACTAATATATTTTTTGT+TGG | - | tig0020311:6619-6638 | Msa1379740:five_prime_UTR | 15.0% |
| !!! | ATTTAGAATTGAAAATTGAG+GGG | + | tig0020311:724-743 | None:intergenic | 20.0% |
| !!! | GAATTTAGAATTGAAAATTG+AGG | + | tig0020311:726-745 | None:intergenic | 20.0% |
| !! | TTCAATGATTAAGAAAATTG+AGG | + | tig0020311:815-834 | None:intergenic | 20.0% |
| !!! | TATTTATTTCTATGCATTGA+CGG | - | tig0020311:868-887 | Msa1379740:CDS | 20.0% |
| !!! | TTTTAAGTGACAAAATATCT+TGG | + | tig0020311:1087-1106 | None:intergenic | 20.0% |
| !!! | GTATTGTTTTATTGGATTAT+CGG | - | tig0020311:1468-1487 | Msa1379740:intron | 20.0% |
| !! | TTATTAAACATGAGAAAGTT+TGG | - | tig0020311:1581-1600 | Msa1379740:intron | 20.0% |
| !!! | TTGATATGTTCATTGATTTT+GGG | - | tig0020311:1760-1779 | Msa1379740:intron | 20.0% |
| !!! | AATAGATTTTAAAGGTACAA+AGG | - | tig0020311:2262-2281 | Msa1379740:CDS | 20.0% |
| !!! | TTCTCTAAAATTTAATTGCA+AGG | - | tig0020311:2319-2338 | Msa1379740:CDS | 20.0% |
| !!! | CAATTGCTTTTTATATTTTG+AGG | - | tig0020311:2484-2503 | Msa1379740:intron | 20.0% |
| !!! | ATTGCTTTTTATATTTTGAG+GGG | - | tig0020311:2486-2505 | Msa1379740:intron | 20.0% |
| !! | TATAACTGTGCTTAATATTT+AGG | - | tig0020311:2546-2565 | Msa1379740:intron | 20.0% |
| !!! | CATTTGGTTATACATAATTT+TGG | - | tig0020311:2719-2738 | Msa1379740:intron | 20.0% |
| !! | CGGGTTAATAAAAAATAAAA+AGG | + | tig0020311:2807-2826 | None:intergenic | 20.0% |
| !! | AAACTGTATTGCAAAATTTA+GGG | - | tig0020311:2881-2900 | Msa1379740:intron | 20.0% |
| !! | AAACAATAAAACTGATGATA+CGG | + | tig0020311:3161-3180 | None:intergenic | 20.0% |
| !! | TTCATAAAGAAGTTTAATGT+AGG | - | tig0020311:3211-3230 | Msa1379740:intron | 20.0% |
| !!! | ATCATTTTAATGAAGAAAAC+GGG | - | tig0020311:3535-3554 | Msa1379740:intron | 20.0% |
| !! | ATACATATTTGCTTACTATT+TGG | - | tig0020311:3811-3830 | Msa1379740:intron | 20.0% |
| !!! | TAGTTAATCAGGAAATTTTA+TGG | - | tig0020311:4032-4051 | Msa1379740:intron | 20.0% |
| !! | AATTATAAATTTATATGGGG+AGG | - | tig0020311:4687-4706 | Msa1379740:intron | 20.0% |
| !! | ATTATAAATTTATATGGGGA+GGG | - | tig0020311:4688-4707 | Msa1379740:intron | 20.0% |
| !! | TGAACATTAGTTCATTAATA+AGG | - | tig0020311:4775-4794 | Msa1379740:intron | 20.0% |
| !! | TATAATTTACTGTAAAGAAG+TGG | + | tig0020311:5120-5139 | None:intergenic | 20.0% |
| !!! | ATTTTTTTAGTTTAACCTGA+AGG | - | tig0020311:5465-5484 | Msa1379740:intron | 20.0% |
| !! | GTCCTAAATATTAACTATAA+TGG | - | tig0020311:5603-5622 | Msa1379740:CDS | 20.0% |
| !! | CTCCATTATAGTTAATATTT+AGG | + | tig0020311:5608-5627 | None:intergenic | 20.0% |
| !! | TAAATTTCAATAACAAAAGC+AGG | + | tig0020311:5712-5731 | None:intergenic | 20.0% |
| !! | TTATTGAAATTTAGTGAGAT+CGG | - | tig0020311:5719-5738 | Msa1379740:CDS | 20.0% |
| !! | GAGATAATTTAATATGTATG+TGG | - | tig0020311:5836-5855 | Msa1379740:CDS | 20.0% |
| !!! | ATTCATTGTTGACATTTTTA+TGG | + | tig0020311:5892-5911 | None:intergenic | 20.0% |
| !! | AATACAATTCTAAATGAATC+CGG | + | tig0020311:6398-6417 | None:intergenic | 20.0% |
| !! | GTCTGTATAATACAAATTAA+GGG | + | tig0020311:6438-6457 | None:intergenic | 20.0% |
| !! | TACTATACATAATACAACAA+TGG | + | tig0020311:6467-6486 | None:intergenic | 20.0% |
| !! | GTTGTATTATGTATAGTATA+TGG | - | tig0020311:6469-6488 | Msa1379740:five_prime_UTR | 20.0% |
| !! | ATGTAATACAATAAAATAGG+GGG | + | tig0020311:6602-6621 | None:intergenic | 20.0% |
| !! | TTTAGAATTGAAAATTGAGG+GGG | + | tig0020311:723-742 | None:intergenic | 25.0% |
| ! | ACCTAAAATAATTGTGCATA+AGG | + | tig0020311:771-790 | None:intergenic | 25.0% |
| !! | TGTAGTTGATATGATTTGAT+TGG | - | tig0020311:956-975 | Msa1379740:CDS | 25.0% |
| ! | CTAATCTATGCTTATATATC+AGG | - | tig0020311:1224-1243 | Msa1379740:intron | 25.0% |
| !!! | ACATAACTGATCTGAAATTT+TGG | - | tig0020311:1272-1291 | Msa1379740:intron | 25.0% |
| !! | AGGATATTGTTGTATTTTCT+TGG | - | tig0020311:1439-1458 | Msa1379740:intron | 25.0% |
| !!! | AATTGCAGATATTAGTCTTT+TGG | - | tig0020311:1612-1631 | Msa1379740:intron | 25.0% |
| !!! | CTTGATATGTTCATTGATTT+TGG | - | tig0020311:1759-1778 | Msa1379740:intron | 25.0% |
| ! | GAAATTTACTGAATTTATGC+TGG | - | tig0020311:1796-1815 | Msa1379740:intron | 25.0% |
| !! | TGTAATATGTCTTTCCATTT+TGG | - | tig0020311:1925-1944 | Msa1379740:CDS | 25.0% |
| ! | AAAGTGGAAAGACAAATAAA+AGG | + | tig0020311:1957-1976 | None:intergenic | 25.0% |
| !!! | TTTTATTTGTCTTTCCACTT+TGG | - | tig0020311:1956-1975 | Msa1379740:CDS | 25.0% |
| ! | TTTATTTGTCTTTCCACTTT+GGG | - | tig0020311:1957-1976 | Msa1379740:CDS | 25.0% |
| ! | TCTTTAGGTATGTTAATCAT+AGG | + | tig0020311:2071-2090 | None:intergenic | 25.0% |
| ! | GATTAACATACCTAAAGAAT+TGG | - | tig0020311:2073-2092 | Msa1379740:intron | 25.0% |
| !! | TGTGCTTAATATTTAGGTTT+GGG | - | tig0020311:2552-2571 | Msa1379740:intron | 25.0% |
| !! | TTGGTTATACATAATTTTGG+AGG | - | tig0020311:2722-2741 | Msa1379740:intron | 25.0% |
| !!! | ACTTTAAAACAAAGGAATGT+TGG | + | tig0020311:2755-2774 | None:intergenic | 25.0% |
| ! | ATCAAATTACAGTTCTTACA+CGG | + | tig0020311:2827-2846 | None:intergenic | 25.0% |
| ! | CAAACTGTATTGCAAAATTT+AGG | - | tig0020311:2880-2899 | Msa1379740:intron | 25.0% |
| !! | GATACGATTTTACATTTCAA+TGG | - | tig0020311:2956-2975 | Msa1379740:intron | 25.0% |
| ! | TATGAATATTCCGCATAAAA+AGG | + | tig0020311:3197-3216 | None:intergenic | 25.0% |
| ! | AAAGAAGTTTAATGTAGGTA+TGG | - | tig0020311:3216-3235 | Msa1379740:intron | 25.0% |
| ! | TACATAGGTAGAGAAATATA+GGG | + | tig0020311:3335-3354 | None:intergenic | 25.0% |
| ! | ATACATAGGTAGAGAAATAT+AGG | + | tig0020311:3336-3355 | None:intergenic | 25.0% |
| ! | TGCACTTCAAATATAAAATG+AGG | + | tig0020311:3433-3452 | None:intergenic | 25.0% |
| !!! | TCATTTTAATGAAGAAAACG+GGG | - | tig0020311:3536-3555 | Msa1379740:intron | 25.0% |
| ! | AAATAGTTATACTAGAATCG+TGG | + | tig0020311:3975-3994 | None:intergenic | 25.0% |
| ! | AATGTTAATGAATCTCTGAT+AGG | + | tig0020311:4008-4027 | None:intergenic | 25.0% |
| ! | TATCAGAGATTCATTAACAT+TGG | - | tig0020311:4007-4026 | Msa1379740:intron | 25.0% |
| !! | AGGAAATTTTATGGATATGA+AGG | - | tig0020311:4041-4060 | Msa1379740:intron | 25.0% |
| ! | GTTAAGAATTTCATCATAAG+AGG | + | tig0020311:4084-4103 | None:intergenic | 25.0% |
| !! | AGCTACTTTATAAGGAAATA+TGG | + | tig0020311:4295-4314 | None:intergenic | 25.0% |
| !! | TAACAATGAGCTACTTTATA+AGG | + | tig0020311:4303-4322 | None:intergenic | 25.0% |
| ! | AACTATGTAAAGCAACAATA+GGG | + | tig0020311:4446-4465 | None:intergenic | 25.0% |
| ! | TAACTATGTAAAGCAACAAT+AGG | + | tig0020311:4447-4466 | None:intergenic | 25.0% |
| ! | TGAATGAAATGCATAAAACT+AGG | - | tig0020311:4533-4552 | Msa1379740:intron | 25.0% |
| ! | ATGCATCTCTTTATTATCAA+AGG | + | tig0020311:4633-4652 | None:intergenic | 25.0% |
| !! | AGATGCATTAGTTTATGAAT+GGG | - | tig0020311:4645-4664 | Msa1379740:CDS | 25.0% |
| !!! | GGTGTGTAATTTTTTTAAAC+AGG | - | tig0020311:4848-4867 | Msa1379740:intron | 25.0% |
| !!! | GTGTAATTTTTTTAAACAGG+TGG | - | tig0020311:4851-4870 | Msa1379740:intron | 25.0% |
| !!! | TGTTCATTTTTTTAGACTCT+TGG | + | tig0020311:4881-4900 | None:intergenic | 25.0% |
| ! | TTACATTGTGACTAAGATAA+CGG | - | tig0020311:5043-5062 | Msa1379740:intron | 25.0% |
| ! | GATGAAATAAGTCATTAACA+AGG | + | tig0020311:5155-5174 | None:intergenic | 25.0% |
| !! | ATACATCTCATTCTTACTTT+TGG | - | tig0020311:5339-5358 | Msa1379740:intron | 25.0% |
| ! | ATTATGAACATAAGTGAACT+TGG | - | tig0020311:5685-5704 | Msa1379740:CDS | 25.0% |
| ! | AAATGTGAAGTTTGAATTGA+TGG | + | tig0020311:5781-5800 | None:intergenic | 25.0% |
| ! | ACCTAGAAAATTTATTTCCT+AGG | - | tig0020311:5919-5938 | Msa1379740:five_prime_UTR | 25.0% |
| !! | TCCTAGGAAATAAATTTTCT+AGG | + | tig0020311:5923-5942 | None:intergenic | 25.0% |
| ! | TCGAATCAAATTTCATTGTT+TGG | - | tig0020311:5945-5964 | Msa1379740:five_prime_UTR | 25.0% |
| ! | ATCAAATTTCATTGTTTGGT+TGG | - | tig0020311:5949-5968 | Msa1379740:five_prime_UTR | 25.0% |
| ! | AATTCAGTGAACATATATGT+TGG | - | tig0020311:6112-6131 | Msa1379740:intron | 25.0% |
| ! | GGTCTGTATAATACAAATTA+AGG | + | tig0020311:6439-6458 | None:intergenic | 25.0% |
| ! | CATAATACAACAATGGATAA+GGG | + | tig0020311:6460-6479 | None:intergenic | 25.0% |
| ! | ACATAATACAACAATGGATA+AGG | + | tig0020311:6461-6480 | None:intergenic | 25.0% |
| !!! | ATTTTTAAAAGCCTTAGAAG+AGG | + | tig0020311:6554-6573 | None:intergenic | 25.0% |
| ! | TGTAATACAATAAAATAGGG+GGG | + | tig0020311:6601-6620 | None:intergenic | 25.0% |
| !! | ACTTTGGAAACTATTGTTTA+TGG | - | tig0020311:6708-6727 | Msa1379740:five_prime_UTR | 25.0% |
| ! | GCCTTATGCACAATTATTTT+AGG | - | tig0020311:767-786 | Msa1379740:three_prime_UTR | 30.0% |
| ACATCATGGAGTGATTTAAT+TGG | + | tig0020311:915-934 | None:intergenic | 30.0% | |
| ATATCAGGTGATGTTATCTT+TGG | - | tig0020311:1239-1258 | Msa1379740:intron | 30.0% | |
| !! | GAAAGCTACTTGATTTTTAG+TGG | - | tig0020311:1391-1410 | Msa1379740:intron | 30.0% |
| TTTCCATAGATTGAAAGAAC+CGG | + | tig0020311:1504-1523 | None:intergenic | 30.0% | |
| CTTTCAATCTATGGAAAATG+TGG | - | tig0020311:1507-1526 | Msa1379740:intron | 30.0% | |
| ! | ATAATCTCAGCTTTAGTAAC+AGG | + | tig0020311:1565-1584 | None:intergenic | 30.0% |
| ATAGTAGCTAATGAAATCTG+AGG | + | tig0020311:1655-1674 | None:intergenic | 30.0% | |
| TAGCTACTATTGATGCTATA+CGG | - | tig0020311:1665-1684 | Msa1379740:intron | 30.0% | |
| ATTGATGCTATACGGAATAT+AGG | - | tig0020311:1673-1692 | Msa1379740:intron | 30.0% | |
| TTGATGCTATACGGAATATA+GGG | - | tig0020311:1674-1693 | Msa1379740:intron | 30.0% | |
| ! | TTTTGAACTCTGTCTTTCAT+AGG | - | tig0020311:1729-1748 | Msa1379740:intron | 30.0% |
| TTATTTGTCTTTCCACTTTG+GGG | - | tig0020311:1958-1977 | Msa1379740:CDS | 30.0% | |
| TTAGGTATGTTAATCATAGG+TGG | + | tig0020311:2068-2087 | None:intergenic | 30.0% | |
| TGTCAACTAACCAATTCTTT+AGG | + | tig0020311:2086-2105 | None:intergenic | 30.0% | |
| ! | CGACGATTTTAAACAGTTTA+AGG | + | tig0020311:2110-2129 | None:intergenic | 30.0% |
| ! | GTGTTTTCTTTCAAATTGTG+AGG | + | tig0020311:2143-2162 | None:intergenic | 30.0% |
| ! | TATTTTGTATATGTCAGTGC+TGG | - | tig0020311:2397-2416 | Msa1379740:intron | 30.0% |
| ! | CTGTGCTTAATATTTAGGTT+TGG | - | tig0020311:2551-2570 | Msa1379740:intron | 30.0% |
| TTGAAAAAGATTGCAGATCT+AGG | - | tig0020311:2657-2676 | Msa1379740:intron | 30.0% | |
| ! | TATGGATAGTAGAGCTATTT+TGG | - | tig0020311:2682-2701 | Msa1379740:intron | 30.0% |
| !!! | TAGAGCTATTTTGGTCATTT+TGG | - | tig0020311:2691-2710 | Msa1379740:intron | 30.0% |
| !!! | AGAGCTATTTTGGTCATTTT+GGG | - | tig0020311:2692-2711 | Msa1379740:intron | 30.0% |
| TCAAATTACAGTTCTTACAC+GGG | + | tig0020311:2826-2845 | None:intergenic | 30.0% | |
| ATACAGTTTGTAAGAAGAGA+AGG | + | tig0020311:2870-2889 | None:intergenic | 30.0% | |
| GTAAACGTAATAATACACGT+TGG | + | tig0020311:2982-3001 | None:intergenic | 30.0% | |
| !! | CTTCAGTTTGTTTCATGTTT+TGG | - | tig0020311:3359-3378 | Msa1379740:intron | 30.0% |
| AGAAAGGTCAAAATTTGAGA+GGG | + | tig0020311:3401-3420 | None:intergenic | 30.0% | |
| TAGAAAGGTCAAAATTTGAG+AGG | + | tig0020311:3402-3421 | None:intergenic | 30.0% | |
| CAAATTTCACTACAATAAGG+TGG | + | tig0020311:3613-3632 | None:intergenic | 30.0% | |
| CACCTTATTGTAGTGAAATT+TGG | - | tig0020311:3611-3630 | Msa1379740:intron | 30.0% | |
| AGCCAAATTTCACTACAATA+AGG | + | tig0020311:3616-3635 | None:intergenic | 30.0% | |
| ! | TTTTCTGCATCATCTATTTG+AGG | + | tig0020311:3759-3778 | None:intergenic | 30.0% |
| !! | TAACATTGGCTTAGTTAATC+AGG | - | tig0020311:4021-4040 | Msa1379740:intron | 30.0% |
| TAGTCAAGCTAAATTTCTTG+AGG | - | tig0020311:4415-4434 | Msa1379740:intron | 30.0% | |
| ! | GAGATGCATTAGTTTATGAA+TGG | - | tig0020311:4644-4663 | Msa1379740:CDS | 30.0% |
| !! | ATTAATAAGGAGTACTGATG+TGG | - | tig0020311:4788-4807 | Msa1379740:intron | 30.0% |
| !! | TTAATAAGGAGTACTGATGT+GGG | - | tig0020311:4789-4808 | Msa1379740:intron | 30.0% |
| !!! | TCTTTTTTTACCTCTTCAAC+AGG | - | tig0020311:5173-5192 | Msa1379740:intron | 30.0% |
| ! | ACTATAATGGAGTTAGCTTA+TGG | - | tig0020311:5616-5635 | Msa1379740:CDS | 30.0% |
| !!! | CGTACATTTTTTAATGCAAG+AGG | - | tig0020311:5744-5763 | Msa1379740:CDS | 30.0% |
| CTTAAGATCGCTGTATAATT+GGG | + | tig0020311:5866-5885 | None:intergenic | 30.0% | |
| ACTTAAGATCGCTGTATAAT+TGG | + | tig0020311:5867-5886 | None:intergenic | 30.0% | |
| ! | GAAATTTGATTCGAAATCCT+AGG | + | tig0020311:5939-5958 | None:intergenic | 30.0% |
| AAATTTCATTGTTTGGTTGG+AGG | - | tig0020311:5952-5971 | Msa1379740:five_prime_UTR | 30.0% | |
| CAGATGGGTATTAAATGAAA+GGG | + | tig0020311:5984-6003 | None:intergenic | 30.0% | |
| TCAGATGGGTATTAAATGAA+AGG | + | tig0020311:5985-6004 | None:intergenic | 30.0% | |
| CTTACATATAGAACTCAGAT+GGG | + | tig0020311:5999-6018 | None:intergenic | 30.0% | |
| ACTTACATATAGAACTCAGA+TGG | + | tig0020311:6000-6019 | None:intergenic | 30.0% | |
| TAAAGCTTCTTCATAGAACA+AGG | + | tig0020311:6044-6063 | None:intergenic | 30.0% | |
| ! | TATGAAGAAGCTTTATAGAG+CGG | - | tig0020311:6049-6068 | Msa1379740:intron | 30.0% |
| ! | TACAAAGTATCTATAAGCCA+TGG | + | tig0020311:6148-6167 | None:intergenic | 30.0% |
| !!! | GTATCTCAGTTTTGATTGTT+AGG | - | tig0020311:6260-6279 | Msa1379740:intron | 30.0% |
| ! | ATTGTTAGGCGTATAGTTTT+TGG | - | tig0020311:6274-6293 | Msa1379740:intron | 30.0% |
| TGTTGTACTATCTTCTCTTA+AGG | - | tig0020311:6369-6388 | Msa1379740:intron | 30.0% | |
| ATGTATAGTATATGGTTCCT+AGG | - | tig0020311:6477-6496 | Msa1379740:five_prime_UTR | 30.0% | |
| TAATACAATAAAATAGGGGG+GGG | + | tig0020311:6599-6618 | None:intergenic | 30.0% | |
| GTAATACAATAAAATAGGGG+GGG | + | tig0020311:6600-6619 | None:intergenic | 30.0% | |
| ACAGAAGACAGAAACAAACT+GGG | - | tig0020311:512-531 | Msa1379740:three_prime_UTR | 35.0% | |
| AGAACGTGTTTACATTTGCA+TGG | + | tig0020311:540-559 | None:intergenic | 35.0% | |
| CAATTTGATTGGAGACTTAC+CGG | + | tig0020311:648-667 | None:intergenic | 35.0% | |
| GAGAGGGAAAACAATTTGAT+TGG | + | tig0020311:659-678 | None:intergenic | 35.0% | |
| TTGAATTGATAGAGCAGAGA+GGG | + | tig0020311:675-694 | None:intergenic | 35.0% | |
| ATTGAATTGATAGAGCAGAG+AGG | + | tig0020311:676-695 | None:intergenic | 35.0% | |
| AATTGAAAATTGAGGGGGAA+TGG | + | tig0020311:718-737 | None:intergenic | 35.0% | |
| ACACGCATACAAATACATCA+TGG | + | tig0020311:929-948 | None:intergenic | 35.0% | |
| ! | ATTGAAACCCTTTTGCTACT+TGG | - | tig0020311:1299-1318 | Msa1379740:intron | 35.0% |
| TTTAGTGGAGAAACATCTCT+TGG | - | tig0020311:1406-1425 | Msa1379740:intron | 35.0% | |
| CATCTCTTGGAAATAGTGTT+AGG | - | tig0020311:1419-1438 | Msa1379740:intron | 35.0% | |
| !! | GGTCTTGCGTATTGTTTTAT+TGG | - | tig0020311:1460-1479 | Msa1379740:intron | 35.0% |
| TTCCATAGATTGAAAGAACC+GGG | + | tig0020311:1503-1522 | None:intergenic | 35.0% | |
| AAAATGTGGTCAAGCATTCA+AGG | - | tig0020311:1521-1540 | Msa1379740:intron | 35.0% | |
| AAATGTGGTCAAGCATTCAA+GGG | - | tig0020311:1522-1541 | Msa1379740:intron | 35.0% | |
| !!! | GATATTAGTCTTTTGGCGTT+TGG | - | tig0020311:1619-1638 | Msa1379740:intron | 35.0% |
| TGATGCTATACGGAATATAG+GGG | - | tig0020311:1675-1694 | Msa1379740:intron | 35.0% | |
| AACTCTGTCTTTCATAGGAT+GGG | - | tig0020311:1734-1753 | Msa1379740:intron | 35.0% | |
| ATCTTACTAACTCTGCTTAG+TGG | - | tig0020311:1859-1878 | Msa1379740:intron | 35.0% | |
| AACTCTGCTTAGTGGAAAAA+AGG | - | tig0020311:1867-1886 | Msa1379740:intron | 35.0% | |
| ATGTTAATCATAGGTGGAGT+TGG | + | tig0020311:2062-2081 | None:intergenic | 35.0% | |
| CTTGATCTTTAAGCTTACGT+TGG | - | tig0020311:2202-2221 | Msa1379740:CDS | 35.0% | |
| GCACAGTTATAGAGAGTTAT+AGG | + | tig0020311:2537-2556 | None:intergenic | 35.0% | |
| ! | TAATATTTAGGTTTGGGACC+TGG | - | tig0020311:2558-2577 | Msa1379740:intron | 35.0% |
| !! | TTTTTCAACTCTCCTGCTTT+TGG | + | tig0020311:2645-2664 | None:intergenic | 35.0% |
| TAAGACTACCTCTCACTTTA+AGG | - | tig0020311:2926-2945 | Msa1379740:intron | 35.0% | |
| AAGACTACCTCTCACTTTAA+GGG | - | tig0020311:2927-2946 | Msa1379740:intron | 35.0% | |
| ! | ATTGTCCTAACTTGCAGATT+GGG | + | tig0020311:3046-3065 | None:intergenic | 35.0% |
| ! | AATTGTCCTAACTTGCAGAT+TGG | + | tig0020311:3047-3066 | None:intergenic | 35.0% |
| ! | TCCTGATTGTCCTTTTTATG+CGG | - | tig0020311:3184-3203 | Msa1379740:intron | 35.0% |
| TCCAAACGTAATAACTCTGT+GGG | - | tig0020311:3241-3260 | Msa1379740:intron | 35.0% | |
| !! | ATACTGAAGTACTGTCAACA+AGG | + | tig0020311:3270-3289 | None:intergenic | 35.0% |
| TTGTTGACAGTACTTCAGTA+TGG | - | tig0020311:3269-3288 | Msa1379740:intron | 35.0% | |
| ACAAACTGAAGCACATACAT+AGG | + | tig0020311:3350-3369 | None:intergenic | 35.0% | |
| ! | AATGAGGTGTCAGAATAGAA+AGG | + | tig0020311:3417-3436 | None:intergenic | 35.0% |
| TCATGCAAGCAAATTGTTTC+AGG | + | tig0020311:3661-3680 | None:intergenic | 35.0% | |
| TGATGCAGAAAATTCTGACA+AGG | - | tig0020311:3767-3786 | Msa1379740:CDS | 35.0% | |
| CAAGGTTATAGAAACAAGAC+TGG | - | tig0020311:3785-3804 | Msa1379740:intron | 35.0% | |
| TATTTGGAGACAGCAATTTG+TGG | - | tig0020311:3827-3846 | Msa1379740:intron | 35.0% | |
| ! | GCTGTGGTTGTTGTTATAAT+TGG | + | tig0020311:3918-3937 | None:intergenic | 35.0% |
| ! | ACTAGAATCGTGGATTTTGA+AGG | + | tig0020311:3965-3984 | None:intergenic | 35.0% |
| AGTACCTGTTGAATTTCAGA+TGG | - | tig0020311:4268-4287 | Msa1379740:intron | 35.0% | |
| GTACCTGTTGAATTTCAGAT+GGG | - | tig0020311:4269-4288 | Msa1379740:intron | 35.0% | |
| !! | AACAATGTAAAGTTTGGTGC+TGG | - | tig0020311:4574-4593 | Msa1379740:CDS | 35.0% |
| ATAAATTTATATGGGGAGGG+AGG | - | tig0020311:4691-4710 | Msa1379740:intron | 35.0% | |
| TATCGTCAATTTCTGATGAC+TGG | - | tig0020311:4827-4846 | Msa1379740:intron | 35.0% | |
| GAACAATATCTATATCCGCA+TGG | - | tig0020311:4896-4915 | Msa1379740:intron | 35.0% | |
| AAAGCGAACATAAATCTCCA+CGG | + | tig0020311:4951-4970 | None:intergenic | 35.0% | |
| GATCTTATAAGTTGTGTCAC+AGG | - | tig0020311:5065-5084 | Msa1379740:intron | 35.0% | |
| TTTACTGTAAAGAAGTGGAG+CGG | + | tig0020311:5115-5134 | None:intergenic | 35.0% | |
| AGCATTTATTCCTGTTGAAG+AGG | + | tig0020311:5186-5205 | None:intergenic | 35.0% | |
| ! | AAGCTGCACTCCATAAATTT+TGG | + | tig0020311:5433-5452 | None:intergenic | 35.0% |
| !!! | GGAGTGCAGCTTTTTATTTT+TGG | - | tig0020311:5441-5460 | Msa1379740:intron | 35.0% |
| !! | TTTAACCTGAAGGTTCTGAA+AGG | - | tig0020311:5475-5494 | Msa1379740:intron | 35.0% |
| TCTCTAATTGCTGTGAATGT+AGG | + | tig0020311:5820-5839 | None:intergenic | 35.0% | |
| TCATAGAACAAGGATTTGAC+AGG | + | tig0020311:6034-6053 | None:intergenic | 35.0% | |
| GTGAACATATATGTTGGCAT+TGG | - | tig0020311:6118-6137 | Msa1379740:intron | 35.0% | |
| CAAAACTGAGATACATCCAA+CGG | + | tig0020311:6254-6273 | None:intergenic | 35.0% | |
| CTATCTTCTCTTAAGGTTTC+CGG | - | tig0020311:6376-6395 | Msa1379740:intron | 35.0% | |
| AATACAATAAAATAGGGGGG+GGG | + | tig0020311:6598-6617 | None:intergenic | 35.0% | |
| ATTAAATCTTCTCCCTAGAG+AGG | - | tig0020311:6684-6703 | Msa1379740:five_prime_UTR | 35.0% | |
| TGGAAACTATTGTTTATGGC+TGG | - | tig0020311:6712-6731 | Msa1379740:five_prime_UTR | 35.0% | |
| GACAGAAGACAGAAACAAAC+TGG | - | tig0020311:511-530 | Msa1379740:three_prime_UTR | 40.0% | |
| ! | TGTTTGTTGCTGGGTGAAAA+AGG | + | tig0020311:594-613 | None:intergenic | 40.0% |
| ATTGTGCATAAGGCAAGTTG+TGG | + | tig0020311:761-780 | None:intergenic | 40.0% | |
| GTTGAGTCAGTATCTATCAG+TGG | + | tig0020311:1049-1068 | None:intergenic | 40.0% | |
| !! | ACCCTTTTGCTACTTGGATT+TGG | - | tig0020311:1305-1324 | Msa1379740:intron | 40.0% |
| GCCAAATCCAAGTAGCAAAA+GGG | + | tig0020311:1309-1328 | None:intergenic | 40.0% | |
| TGCCAAATCCAAGTAGCAAA+AGG | + | tig0020311:1310-1329 | None:intergenic | 40.0% | |
| ! | TGGGTACTTATCCAGTTTTC+TGG | - | tig0020311:1351-1370 | Msa1379740:intron | 40.0% |
| ! | GGGTACTTATCCAGTTTTCT+GGG | - | tig0020311:1352-1371 | Msa1379740:intron | 40.0% |
| ! | GATTATCGGCTATAACATCC+CGG | - | tig0020311:1482-1501 | Msa1379740:intron | 40.0% |
| ATCCCGGTTCTTTCAATCTA+TGG | - | tig0020311:1498-1517 | Msa1379740:intron | 40.0% | |
| AATATAGGGGACTTGTATGC+TGG | - | tig0020311:1688-1707 | Msa1379740:intron | 40.0% | |
| GAACTCTGTCTTTCATAGGA+TGG | - | tig0020311:1733-1752 | Msa1379740:intron | 40.0% | |
| ! | ATAAAAGGAGTGCGCCAAAA+TGG | + | tig0020311:1942-1961 | None:intergenic | 40.0% |
| !!! | TTTGGGGTAGGCAACTTTTT+TGG | - | tig0020311:1974-1993 | Msa1379740:CDS | 40.0% |
| TGTGTGGTAATTCCAAAAGC+AGG | - | tig0020311:2630-2649 | Msa1379740:intron | 40.0% | |
| AGATTGCAGATCTAGGAGTA+TGG | - | tig0020311:2664-2683 | Msa1379740:intron | 40.0% | |
| !! | GGTCATTTTGGGCTTACATT+TGG | - | tig0020311:2703-2722 | Msa1379740:intron | 40.0% |
| CTAACATCCCTTAAAGTGAG+AGG | + | tig0020311:2937-2956 | None:intergenic | 40.0% | |
| TGGATATTCATCGTCAGCTT+AGG | + | tig0020311:3009-3028 | None:intergenic | 40.0% | |
| ! | TTGTCCTAACTTGCAGATTG+GGG | + | tig0020311:3045-3064 | None:intergenic | 40.0% |
| TCCGCATAAAAAGGACAATC+AGG | + | tig0020311:3188-3207 | None:intergenic | 40.0% | |
| CTCCAAACGTAATAACTCTG+TGG | - | tig0020311:3240-3259 | Msa1379740:intron | 40.0% | |
| TCCCACAGAGTTATTACGTT+TGG | + | tig0020311:3245-3264 | None:intergenic | 40.0% | |
| AAACGTAATAACTCTGTGGG+AGG | - | tig0020311:3244-3263 | Msa1379740:intron | 40.0% | |
| CTTATGCTCAAGACAAACGT+TGG | - | tig0020311:3309-3328 | Msa1379740:intron | 40.0% | |
| ! | TTTGAAGTGCAAGAGATGAG+AGG | - | tig0020311:3442-3461 | Msa1379740:CDS | 40.0% |
| TTCTGTTTAGGAGTCTCTTC+TGG | + | tig0020311:3483-3502 | None:intergenic | 40.0% | |
| TGCTCATTGGACTTCTGTTT+AGG | + | tig0020311:3495-3514 | None:intergenic | 40.0% | |
| !! | TCTGGGGTTTTCTGAATGAA+TGG | + | tig0020311:3580-3599 | None:intergenic | 40.0% |
| ATTCATTCAGAAAACCCCAG+AGG | - | tig0020311:3579-3598 | Msa1379740:intron | 40.0% | |
| GGTTATAGAAACAAGACTGG+AGG | - | tig0020311:3788-3807 | Msa1379740:intron | 40.0% | |
| TAACAACAACCACAGCCAAT+TGG | - | tig0020311:3922-3941 | Msa1379740:CDS | 40.0% | |
| TAAAGCAGATAATAGCCTCG+TGG | - | tig0020311:4202-4221 | Msa1379740:intron | 40.0% | |
| !! | TGTAAAGTTTGGTGCTGGTT+TGG | - | tig0020311:4579-4598 | Msa1379740:CDS | 40.0% |
| ATCGAGCAATTTACTGACGT+TGG | - | tig0020311:4605-4624 | Msa1379740:CDS | 40.0% | |
| AAATCCATCCGTGAGCAATA+TGG | + | tig0020311:4986-5005 | None:intergenic | 40.0% | |
| ! | TGCTCTCTTCTTTTCATCAG+TGG | - | tig0020311:5014-5033 | Msa1379740:intron | 40.0% |
| ! | GCTCTCTTCTTTTCATCAGT+GGG | - | tig0020311:5015-5034 | Msa1379740:intron | 40.0% |
| AGTCATTAACAAGGCAACTG+TGG | + | tig0020311:5146-5165 | None:intergenic | 40.0% | |
| ATCATGCTTGCCACTAAATC+AGG | + | tig0020311:5251-5270 | None:intergenic | 40.0% | |
| TGCTGAACGTCAAAAAACAG+CGG | - | tig0020311:5274-5293 | Msa1379740:intron | 40.0% | |
| CAATTGCAAACATCACTTGC+AGG | - | tig0020311:5303-5322 | Msa1379740:intron | 40.0% | |
| AACTTCCTTTCAGAACCTTC+AGG | + | tig0020311:5483-5502 | None:intergenic | 40.0% | |
| AAGGAAGTTATAACCTCCAG+TGG | - | tig0020311:5494-5513 | Msa1379740:intron | 40.0% | |
| ATAAGAAGTTGAACCACTGG+AGG | + | tig0020311:5510-5529 | None:intergenic | 40.0% | |
| TCCAGTGGTTCAACTTCTTA+TGG | - | tig0020311:5509-5528 | Msa1379740:intron | 40.0% | |
| TCCATAAGAAGTTGAACCAC+TGG | + | tig0020311:5513-5532 | None:intergenic | 40.0% | |
| !! | TACTCTGAGATGTTCGAAAC+AGG | + | tig0020311:5544-5563 | None:intergenic | 40.0% |
| !!! | ATAGTTTTTGGTGCAGAGCT+TGG | - | tig0020311:6286-6305 | Msa1379740:intron | 40.0% |
| TAAGGAAGAGTGATGACTTC+TGG | + | tig0020311:6511-6530 | None:intergenic | 40.0% | |
| ! | GTATTGGCATACCTCTTCTA+AGG | - | tig0020311:6540-6559 | Msa1379740:five_prime_UTR | 40.0% |
| ATACAATAAAATAGGGGGGG+GGG | + | tig0020311:6597-6616 | None:intergenic | 40.0% | |
| GTTTCCAAAGTTCCTCTCTA+GGG | + | tig0020311:6699-6718 | None:intergenic | 40.0% | |
| AGTTTCCAAAGTTCCTCTCT+AGG | + | tig0020311:6700-6719 | None:intergenic | 40.0% | |
| TGTTGCTGGGTGAAAAAGGA+GGG | + | tig0020311:590-609 | None:intergenic | 45.0% | |
| TTGTTGCTGGGTGAAAAAGG+AGG | + | tig0020311:591-610 | None:intergenic | 45.0% | |
| ! | CAATGACGGTGTTTGTTGCT+GGG | + | tig0020311:603-622 | None:intergenic | 45.0% |
| CTCATCATGACCCAGAAAAC+TGG | + | tig0020311:1365-1384 | None:intergenic | 45.0% | |
| !! | TTGTCTTTCCACTTTGGGGT+AGG | - | tig0020311:1962-1981 | Msa1379740:CDS | 45.0% |
| AAAAGTTGCCTACCCCAAAG+TGG | + | tig0020311:1973-1992 | None:intergenic | 45.0% | |
| GAATTACCACACAAACAGCG+TGG | + | tig0020311:2623-2642 | None:intergenic | 45.0% | |
| ATTGGGGTACAAGCTTGTGT+TGG | + | tig0020311:3029-3048 | None:intergenic | 45.0% | |
| TGTACCCCAATCTGCAAGTT+AGG | - | tig0020311:3038-3057 | Msa1379740:intron | 45.0% | |
| ACAGAAGTCCAATGAGCAAG+TGG | - | tig0020311:3497-3516 | Msa1379740:intron | 45.0% | |
| GCAATTTGTGGATGCACTGA+CGG | - | tig0020311:3839-3858 | Msa1379740:intron | 45.0% | |
| !! | CACAGCCAATTGGTGATGTT+GGG | - | tig0020311:3932-3951 | Msa1379740:CDS | 45.0% |
| TCATAAGAGGCCTGCACTAT+AGG | + | tig0020311:4071-4090 | None:intergenic | 45.0% | |
| AATAGCCTCGTGGAGTTTAC+AGG | - | tig0020311:4212-4231 | Msa1379740:intron | 45.0% | |
| TTGATCCTGTAAACTCCACG+AGG | + | tig0020311:4220-4239 | None:intergenic | 45.0% | |
| ! | TGGCCCATCTGAAATTCAAC+AGG | + | tig0020311:4275-4294 | None:intergenic | 45.0% |
| CATTTACAGCACTAGCCAGT+GGG | - | tig0020311:5216-5235 | Msa1379740:intron | 45.0% | |
| !! | ATGTTGGCATTGGTGTTCCA+TGG | - | tig0020311:6128-6147 | Msa1379740:intron | 45.0% |
| CTCTCCGAATCCAAAATGCA+GGG | - | tig0020311:6191-6210 | Msa1379740:intron | 45.0% | |
| TCTCCGAATCCAAAATGCAG+GGG | - | tig0020311:6192-6211 | Msa1379740:intron | 45.0% | |
| TGAGATACATCCAACGGAAG+TGG | + | tig0020311:6248-6267 | None:intergenic | 45.0% | |
| ! | AGAGTGATGACTTCTGGAGA+GGG | + | tig0020311:6505-6524 | None:intergenic | 45.0% |
| ! | AAGAGTGATGACTTCTGGAG+AGG | + | tig0020311:6506-6525 | None:intergenic | 45.0% |
| TTCCTTAGTCCCTCGTGTAT+TGG | - | tig0020311:6524-6543 | Msa1379740:five_prime_UTR | 45.0% | |
| ! | AGAGGTATGCCAATACACGA+GGG | + | tig0020311:6536-6555 | None:intergenic | 45.0% |
| ! | AAGAGGTATGCCAATACACG+AGG | + | tig0020311:6537-6556 | None:intergenic | 45.0% |
| TACAATAAAATAGGGGGGGG+GGG | + | tig0020311:6596-6615 | None:intergenic | 45.0% | |
| TTCTCCCTAGAGAGGAACTT+TGG | - | tig0020311:6692-6711 | Msa1379740:five_prime_UTR | 45.0% | |
| !! | ATTTGAATTATAAATTTATA+TGG | - | tig0020311:4682-4701 | Msa1379740:intron | 5.0% |
| !! | TTTGAATTATAAATTTATAT+GGG | - | tig0020311:4683-4702 | Msa1379740:intron | 5.0% |
| GTTGCTGGGTGAAAAAGGAG+GGG | + | tig0020311:589-608 | None:intergenic | 50.0% | |
| ! | GCAATGACGGTGTTTGTTGC+TGG | + | tig0020311:604-623 | None:intergenic | 50.0% |
| ACAAACACCGTCATTGCCAC+CGG | - | tig0020311:607-626 | Msa1379740:three_prime_UTR | 50.0% | |
| TGTGGTCAAGCATTCAAGGG+AGG | - | tig0020311:1525-1544 | Msa1379740:intron | 50.0% | |
| CAAGCATTCAAGGGAGGTTG+TGG | - | tig0020311:1531-1550 | Msa1379740:intron | 50.0% | |
| ATAGGGGACTTGTATGCTGG+AGG | - | tig0020311:1691-1710 | Msa1379740:intron | 50.0% | |
| ACCACACAAACAGCGTGGAT+GGG | + | tig0020311:2618-2637 | None:intergenic | 50.0% | |
| TACCACACAAACAGCGTGGA+TGG | + | tig0020311:2619-2638 | None:intergenic | 50.0% | |
| ! | AGAGCACTCCACTTGCTCAT+TGG | + | tig0020311:3508-3527 | None:intergenic | 50.0% |
| AAGGTGGAACAGCTACCTCT+GGG | + | tig0020311:3597-3616 | None:intergenic | 50.0% | |
| TAAGGTGGAACAGCTACCTC+TGG | + | tig0020311:3598-3617 | None:intergenic | 50.0% | |
| CCAACATCACCAATTGGCTG+TGG | + | tig0020311:3934-3953 | None:intergenic | 50.0% | |
| !! | CCACAGCCAATTGGTGATGT+TGG | - | tig0020311:3931-3950 | Msa1379740:CDS | 50.0% |
| TGAAGGCTTGCCTATAGTGC+AGG | - | tig0020311:4058-4077 | Msa1379740:intron | 50.0% | |
| ! | TCCGCATGGCTCGAATTTTC+TGG | - | tig0020311:4910-4929 | Msa1379740:intron | 50.0% |
| GCCAGAAAATTCGAGCCATG+CGG | + | tig0020311:4914-4933 | None:intergenic | 50.0% | |
| !!! | GGCAGCTGTTACTTTTACCG+TGG | - | tig0020311:4931-4950 | Msa1379740:intron | 50.0% |
| ATCCGTGAGCAATATGGCAC+GGG | + | tig0020311:4980-4999 | None:intergenic | 50.0% | |
| CATCCGTGAGCAATATGGCA+CGG | + | tig0020311:4981-5000 | None:intergenic | 50.0% | |
| GCATTTACAGCACTAGCCAG+TGG | - | tig0020311:5215-5234 | Msa1379740:intron | 50.0% | |
| GACCTCATGGCCTGATTTAG+TGG | - | tig0020311:5238-5257 | Msa1379740:intron | 50.0% | |
| TGCCACTAAATCAGGCCATG+AGG | + | tig0020311:5243-5262 | None:intergenic | 50.0% | |
| ! | CCTGCATTTTGGATTCGGAG+AGG | + | tig0020311:6193-6212 | None:intergenic | 50.0% |
| CCTCTCCGAATCCAAAATGC+AGG | - | tig0020311:6190-6209 | Msa1379740:intron | 50.0% | |
| CTCCGAATCCAAAATGCAGG+GGG | - | tig0020311:6193-6212 | Msa1379740:intron | 50.0% | |
| ! | GTCCCCCTGCATTTTGGATT+CGG | + | tig0020311:6198-6217 | None:intergenic | 50.0% |
| ! | AGCTAAGTCCCCCTGCATTT+TGG | + | tig0020311:6204-6223 | None:intergenic | 50.0% |
| ! | GTTTTCTTCGCCACTTCCGT+TGG | - | tig0020311:6235-6254 | Msa1379740:intron | 50.0% |
| !!! | GTTTTTGGTGCAGAGCTTGG+AGG | - | tig0020311:6289-6308 | Msa1379740:intron | 50.0% |
| AGCTTGGAGGACCAAGACTT+TGG | - | tig0020311:6302-6321 | Msa1379740:intron | 50.0% | |
| GCTTGGAGGACCAAGACTTT+GGG | - | tig0020311:6303-6322 | Msa1379740:intron | 50.0% | |
| AGGACCAAGACTTTGGGCAT+GGG | - | tig0020311:6309-6328 | Msa1379740:intron | 50.0% | |
| GTAACCCATGCCCAAAGTCT+TGG | + | tig0020311:6316-6335 | None:intergenic | 50.0% | |
| CAGCAGCATGAAAAACGCAC+AGG | + | tig0020311:6338-6357 | None:intergenic | 50.0% | |
| ! | GTGCGTTTTTCATGCTGCTG+TGG | - | tig0020311:6338-6357 | Msa1379740:intron | 50.0% |
| TGCCAATACACGAGGGACTA+AGG | + | tig0020311:6529-6548 | None:intergenic | 50.0% | |
| ACAATAAAATAGGGGGGGGG+GGG | + | tig0020311:6595-6614 | None:intergenic | 50.0% | |
| GAATTCGCCGGTGGCAATGA+CGG | + | tig0020311:617-636 | None:intergenic | 55.0% | |
| TGGAGACTTACCGGCGAAGA+TGG | + | tig0020311:639-658 | None:intergenic | 55.0% | |
| TTGGGACCTGGAACACTCGT+TGG | - | tig0020311:2570-2589 | Msa1379740:intron | 55.0% | |
| GCAGAACCAACGAGTGTTCC+AGG | + | tig0020311:2579-2598 | None:intergenic | 55.0% | |
| CCACACAAACAGCGTGGATG+GGG | + | tig0020311:2617-2636 | None:intergenic | 55.0% | |
| TGCAAGAGATGAGAGGCCAG+AGG | - | tig0020311:3449-3468 | Msa1379740:CDS | 55.0% | |
| AGATGAGAGGCCAGAGGACT+GGG | - | tig0020311:3455-3474 | Msa1379740:CDS | 55.0% | |
| AGGTGGAACAGCTACCTCTG+GGG | + | tig0020311:3596-3615 | None:intergenic | 55.0% | |
| GCGAGCCCAACATCACCAAT+TGG | + | tig0020311:3940-3959 | None:intergenic | 55.0% | |
| TCCGTGAGCAATATGGCACG+GGG | + | tig0020311:4979-4998 | None:intergenic | 55.0% | |
| CGTGCCATATTGCTCACGGA+TGG | - | tig0020311:4979-4998 | Msa1379740:intron | 55.0% | |
| GAGGACCAAGACTTTGGGCA+TGG | - | tig0020311:6308-6327 | Msa1379740:intron | 55.0% | |
| AATAAAATAGGGGGGGGGGG+GGG | + | tig0020311:6593-6612 | None:intergenic | 55.0% | |
| CAATAAAATAGGGGGGGGGG+GGG | + | tig0020311:6594-6613 | None:intergenic | 55.0% | |
| GCGAAGATGGAATTCGCCGG+TGG | + | tig0020311:626-645 | None:intergenic | 60.0% | |
| CCGGCGAAGATGGAATTCGC+CGG | + | tig0020311:629-648 | None:intergenic | 60.0% | |
| CCGGCGAATTCCATCTTCGC+CGG | - | tig0020311:626-645 | Msa1379740:intron | 60.0% | |
| CCCCATCCACGCTGTTTGTG+TGG | - | tig0020311:2614-2633 | Msa1379740:intron | 60.0% | |
| GAGATGAGAGGCCAGAGGAC+TGG | - | tig0020311:3454-3473 | Msa1379740:CDS | 60.0% | |
| TCTTCTGGCACCCAGTCCTC+TGG | + | tig0020311:3468-3487 | None:intergenic | 60.0% | |
| CCGTGAGCAATATGGCACGG+GGG | + | tig0020311:4978-4997 | None:intergenic | 60.0% | |
| CCCCCGTGCCATATTGCTCA+CGG | - | tig0020311:4975-4994 | Msa1379740:intron | 60.0% | |
| CACTAGCCAGTGGGACCTCA+TGG | - | tig0020311:5225-5244 | Msa1379740:intron | 60.0% | |
| ATCAGGCCATGAGGTCCCAC+TGG | + | tig0020311:5234-5253 | None:intergenic | 60.0% | |
| !! | GACTTCTGGAGAGGGCACCT+AGG | + | tig0020311:6497-6516 | None:intergenic | 60.0% |
| ATAAAATAGGGGGGGGGGGG+GGG | + | tig0020311:6592-6611 | None:intergenic | 60.0% | |
| TAAAATAGGGGGGGGGGGGG+GGG | + | tig0020311:6591-6610 | None:intergenic | 65.0% | |
| AAAATAGGGGGGGGGGGGGG+GGG | + | tig0020311:6590-6609 | None:intergenic | 70.0% | |
| AAATAGGGGGGGGGGGGGGG+GGG | + | tig0020311:6589-6608 | None:intergenic | 75.0% | |
| ! | AATAGGGGGGGGGGGGGGGG+GGG | + | tig0020311:6588-6607 | None:intergenic | 80.0% |
| ! | ATAGGGGGGGGGGGGGGGGG+GGG | + | tig0020311:6587-6606 | None:intergenic | 85.0% |
| ! | TAGGGGGGGGGGGGGGGGGG+GGG | + | tig0020311:6586-6605 | None:intergenic | 90.0% |
| ! | AGGGGGGGGGGGGGGGGGGG+GGG | + | tig0020311:6585-6604 | None:intergenic | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0020311 | gene | 510 | 6735 | 510 | ID=Msa1379740;Name=Msa1379740 |
| tig0020311 | mRNA | 510 | 6735 | 510 | ID=Msa1379740-mRNA-1;Parent=Msa1379740;Name=Msa1379740-mRNA-1;_AED=0.08;_eAED=0.08;_QI=370|1|1|1|0.77|0.6|10|305|509 |
| tig0020311 | exon | 510 | 638 | 510 | ID=Msa1379740-mRNA-1:exon:6813;Parent=Msa1379740-mRNA-1 |
| tig0020311 | exon | 661 | 1134 | 661 | ID=Msa1379740-mRNA-1:exon:6812;Parent=Msa1379740-mRNA-1 |
| tig0020311 | exon | 1921 | 2050 | 1921 | ID=Msa1379740-mRNA-1:exon:6811;Parent=Msa1379740-mRNA-1 |
| tig0020311 | exon | 2159 | 2375 | 2159 | ID=Msa1379740-mRNA-1:exon:6810;Parent=Msa1379740-mRNA-1 |
| tig0020311 | exon | 3385 | 3509 | 3385 | ID=Msa1379740-mRNA-1:exon:6809;Parent=Msa1379740-mRNA-1 |
| tig0020311 | exon | 3645 | 3796 | 3645 | ID=Msa1379740-mRNA-1:exon:6808;Parent=Msa1379740-mRNA-1 |
| tig0020311 | exon | 3894 | 4012 | 3894 | ID=Msa1379740-mRNA-1:exon:6807;Parent=Msa1379740-mRNA-1 |
| tig0020311 | exon | 4565 | 4677 | 4565 | ID=Msa1379740-mRNA-1:exon:6806;Parent=Msa1379740-mRNA-1 |
| tig0020311 | exon | 5533 | 5999 | 5533 | ID=Msa1379740-mRNA-1:exon:6805;Parent=Msa1379740-mRNA-1 |
| tig0020311 | exon | 6457 | 6735 | 6457 | ID=Msa1379740-mRNA-1:exon:6804;Parent=Msa1379740-mRNA-1 |
| tig0020311 | five_prime_UTR | 6457 | 6735 | 6457 | ID=Msa1379740-mRNA-1:five_prime_utr;Parent=Msa1379740-mRNA-1 |
| tig0020311 | five_prime_UTR | 5909 | 5999 | 5909 | ID=Msa1379740-mRNA-1:five_prime_utr;Parent=Msa1379740-mRNA-1 |
| tig0020311 | CDS | 5533 | 5908 | 5533 | ID=Msa1379740-mRNA-1:cds;Parent=Msa1379740-mRNA-1 |
| tig0020311 | CDS | 4565 | 4677 | 4565 | ID=Msa1379740-mRNA-1:cds;Parent=Msa1379740-mRNA-1 |
| tig0020311 | CDS | 3894 | 4012 | 3894 | ID=Msa1379740-mRNA-1:cds;Parent=Msa1379740-mRNA-1 |
| tig0020311 | CDS | 3645 | 3796 | 3645 | ID=Msa1379740-mRNA-1:cds;Parent=Msa1379740-mRNA-1 |
| tig0020311 | CDS | 3385 | 3509 | 3385 | ID=Msa1379740-mRNA-1:cds;Parent=Msa1379740-mRNA-1 |
| tig0020311 | CDS | 2159 | 2375 | 2159 | ID=Msa1379740-mRNA-1:cds;Parent=Msa1379740-mRNA-1 |
| tig0020311 | CDS | 1921 | 2050 | 1921 | ID=Msa1379740-mRNA-1:cds;Parent=Msa1379740-mRNA-1 |
| tig0020311 | CDS | 837 | 1134 | 837 | ID=Msa1379740-mRNA-1:cds;Parent=Msa1379740-mRNA-1 |
| tig0020311 | three_prime_UTR | 661 | 836 | 661 | ID=Msa1379740-mRNA-1:three_prime_utr;Parent=Msa1379740-mRNA-1 |
| tig0020311 | three_prime_UTR | 510 | 638 | 510 | ID=Msa1379740-mRNA-1:three_prime_utr;Parent=Msa1379740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
