AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene000075

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene000075.t1 MTR_2g438720 94.109 662 38 1 1 661 1 662 0.0 1299
MS.gene000075.t1 MTR_2g438700 90.620 661 61 1 1 661 1 660 0.0 1250
MS.gene000075.t1 MTR_2g438640 85.520 663 92 3 1 661 1 661 0.0 1172
MS.gene000075.t1 MTR_2g438640 82.655 663 85 3 1 661 1 635 0.0 1116
MS.gene000075.t1 MTR_2g438440 79.452 657 134 1 5 661 1 656 0.0 1097
MS.gene000075.t1 MTR_2g438400 82.261 513 90 1 149 661 4 515 0.0 882
MS.gene000075.t1 MTR_2g438470 64.138 580 124 6 1 578 1 498 0.0 720
MS.gene000075.t1 MTR_2g438640 81.841 402 70 2 1 400 1 401 0.0 689
MS.gene000075.t1 MTR_2g438640 92.500 160 12 0 502 661 399 558 1.18e-92 299
MS.gene000075.t1 MTR_2g438740 49.908 543 260 6 120 661 6 537 0.0 541
MS.gene000075.t1 MTR_2g438760 47.429 525 249 6 139 661 33 532 1.34e-167 492
MS.gene000075.t1 MTR_5g028190 33.676 487 285 11 188 645 10 487 9.99e-71 239
MS.gene000075.t1 MTR_5g091220 30.713 547 326 12 161 661 33 572 1.14e-62 219
MS.gene000075.t1 MTR_3g055310 31.498 454 267 10 247 661 11 459 3.43e-56 199
MS.gene000075.t1 MTR_3g055310 31.891 439 255 10 262 661 24 457 2.04e-55 197
MS.gene000075.t1 MTR_3g055310 31.891 439 255 10 262 661 51 484 4.59e-55 196
MS.gene000075.t1 MTR_3g055310 39.015 264 157 3 399 661 56 316 7.99e-53 186
MS.gene000075.t1 MTR_3g055310 32.570 393 227 8 302 661 44 431 1.37e-52 188
MS.gene000075.t1 MTR_3g055310 39.015 264 157 3 399 661 119 379 2.47e-52 186
MS.gene000075.t1 MTR_5g028130 40.637 251 143 4 400 645 42 291 7.36e-50 177
MS.gene000075.t1 MTR_5g028930 28.866 485 298 8 195 645 95 566 2.25e-48 180
MS.gene000075.t1 MTR_3g455790 25.905 525 351 10 157 646 31 552 6.22e-45 169
MS.gene000075.t1 MTR_5g028450 40.984 244 142 2 403 645 4 246 1.52e-44 161
MS.gene000075.t1 MTR_3g452020 25.475 526 353 12 157 646 31 553 2.22e-41 159
MS.gene000075.t1 MTR_2g020510 38.431 255 153 4 400 652 390 642 1.26e-40 158
MS.gene000075.t1 MTR_1g113820 26.164 451 303 5 166 611 60 485 3.99e-40 155
MS.gene000075.t1 MTR_1g113760 26.071 537 318 13 162 654 23 524 1.26e-39 154
MS.gene000075.t1 MTR_2g438580 81.579 76 14 0 515 590 1 76 2.90e-37 134
MS.gene000075.t1 MTR_2g020450 37.786 262 160 3 400 660 393 652 7.53e-37 147
MS.gene000075.t1 MTR_2g020450 28.947 190 124 3 165 344 12 200 8.36e-11 65.5
MS.gene000075.t1 MTR_5g085340 37.452 259 155 4 403 655 446 703 1.79e-36 146
MS.gene000075.t1 MTR_5g085350 36.328 256 160 1 403 655 427 682 1.52e-35 143
MS.gene000075.t1 MTR_5g085350 36.328 256 160 1 403 655 440 695 1.73e-35 143
MS.gene000075.t1 MTR_2g017930 37.288 236 136 3 419 651 378 604 1.15e-33 137
MS.gene000075.t1 MTR_2g020470 33.725 255 145 5 400 652 392 624 5.40e-31 129
MS.gene000075.t1 MTR_3g051060 32.937 252 165 4 403 651 437 687 7.97e-31 129
MS.gene000075.t1 MTR_3g058570 33.716 261 162 6 400 652 84 341 3.07e-30 123
MS.gene000075.t1 MTR_3g452020 26.963 382 241 10 295 646 4 377 4.29e-30 124
MS.gene000075.t1 MTR_5g085360 34.197 193 123 4 465 655 504 694 1.34e-29 125
MS.gene000075.t1 MTR_6g017215 38.750 160 96 2 502 660 6 164 3.74e-27 110
MS.gene000075.t1 MTR_3g050500 30.894 246 167 2 403 645 431 676 1.04e-26 116
MS.gene000075.t1 MTR_5g028110 38.926 149 72 2 502 649 2 132 7.33e-24 99.4
MS.gene000075.t1 MTR_5g028690 37.415 147 91 1 500 645 39 185 8.23e-23 98.2
MS.gene000075.t1 MTR_5g028900 35.211 142 81 2 504 645 4 134 1.08e-18 84.0
MS.gene000075.t1 MTR_5g028840 30.435 161 109 2 502 659 2 162 2.86e-17 81.3
MS.gene000075.t1 MTR_1g113730 27.228 202 135 5 395 591 41 235 1.34e-15 79.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene000075.t1 AT5G35810 45.161 279 147 1 387 659 22 300 1.71e-77 251
MS.gene000075.t1 AT3G18670 32.087 508 317 8 168 660 59 553 4.04e-75 253
MS.gene000075.t1 AT3G18670 30.853 551 322 10 168 660 59 608 2.58e-72 246
MS.gene000075.t1 AT5G04700 31.977 516 303 13 191 660 112 625 5.72e-62 219
MS.gene000075.t1 AT5G04690 30.709 508 303 12 191 653 107 610 1.66e-60 214
MS.gene000075.t1 AT5G04690 30.099 505 296 12 191 653 107 596 8.91e-59 209
MS.gene000075.t1 AT5G04690 31.567 453 258 12 229 653 148 576 5.19e-56 201
MS.gene000075.t1 AT5G04680 30.857 525 305 14 191 660 99 620 1.85e-53 195
MS.gene000075.t1 AT5G04680 31.288 489 281 13 224 660 12 497 2.26e-53 192
MS.gene000075.t1 AT5G04680 30.268 522 298 14 191 660 99 606 2.03e-51 189
MS.gene000075.t1 AT5G04680 29.422 554 304 16 191 660 99 649 5.23e-49 182
MS.gene000075.t1 AT5G04730 29.474 475 279 15 229 649 76 548 6.89e-48 178
MS.gene000075.t1 AT3G54065 47.093 172 84 1 488 652 8 179 5.12e-43 155
MS.gene000075.t1 AT5G35830 44.295 149 82 1 160 307 89 237 1.31e-30 122
MS.gene000075.t1 AT5G04700 27.762 353 207 13 194 502 117 465 8.79e-19 90.1

Find 104 sgRNAs with CRISPR-Local

Find 289 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTGCTGAAGTTGGAAATTT+TGG 0.120360 2.3:+52547094 MS.gene000075:CDS
AATCCACATATTAGCTTTAA+AGG 0.161265 2.3:-52548027 None:intergenic
AGTCAACTTGAATTGGTTTC+TGG 0.187623 2.3:+52547331 MS.gene000075:CDS
TCCAATTGGTTAAATTTCTT+TGG 0.210384 2.3:+52546990 MS.gene000075:CDS
CTTAAGATCATCTGGATTAA+TGG 0.210930 2.3:-52543412 None:intergenic
ACTCACAATTACCTGTAAAA+AGG 0.212717 2.3:+52545960 MS.gene000075:CDS
GTGTTTATCCTAGCTTGATA+TGG 0.245918 2.3:+52547137 MS.gene000075:CDS
CATGGTTCGACGTGGGTTCC+TGG 0.258999 2.3:+52548120 MS.gene000075:CDS
ACATCAAATAGGGCATATTA+AGG 0.271630 2.3:+52547234 MS.gene000075:CDS
ATTCACAAGCATGCTCTAAA+TGG 0.276178 2.3:+52545692 MS.gene000075:CDS
AATCGAAATCCATTGGATTC+TGG 0.282577 2.3:+52546815 MS.gene000075:CDS
TTCAATCTCGTACATCAAAT+AGG 0.285147 2.3:+52547223 MS.gene000075:CDS
TGTATCTACACTGGCATCTA+TGG 0.308183 2.3:+52546109 MS.gene000075:CDS
TCTATTCTTGTCTCGCGTTA+TGG 0.309263 2.3:+52547979 MS.gene000075:CDS
TTAGTTGAGAAGGTTTATTT+AGG 0.311609 2.3:-52547063 None:intergenic
AAATGTGCGTCGAGTTACTA+TGG 0.340402 2.3:+52547365 MS.gene000075:CDS
TCAAAGCCACCATACTTTGA+TGG 0.342374 2.3:+52543183 MS.gene000075:CDS
AGTTCTACATCTCCGGTATC+AGG 0.343009 2.3:+52543622 MS.gene000075:CDS
TCCAAAGAAATTTAACCAAT+TGG 0.347460 2.3:-52546991 None:intergenic
GAAATTCTCTTAAGATCATC+TGG 0.353028 2.3:-52543420 None:intergenic
CTTTGGCTTGTGATTAAGAA+TGG 0.356608 2.3:+52543267 MS.gene000075:CDS
ACCACGAAGTCAACTTGAAT+TGG 0.364937 2.3:+52547324 MS.gene000075:CDS
TTTGACTAAAACATCATTCC+TGG 0.378436 2.3:+52547894 MS.gene000075:CDS
TGCATCTTCAAAACAATGTA+TGG 0.381056 2.3:-52546062 None:intergenic
AGTAGGATGCCCATTTGTTA+TGG 0.383040 2.3:-52545771 None:intergenic
CGAGATAGCTTTGCATCTCT+TGG 0.389061 2.3:+52546787 MS.gene000075:CDS
AAGAATGCTGCCATAACAAA+TGG 0.405779 2.3:+52545761 MS.gene000075:CDS
ATGGGAAAATGATCATGTTC+AGG 0.408215 2.3:-52546848 None:intergenic
TCAATCTCGTACATCAAATA+GGG 0.409561 2.3:+52547224 MS.gene000075:CDS
CCGAAACACTTTATTGCACT+TGG 0.414422 2.3:+52547288 MS.gene000075:CDS
AGCATGCTCTAAATGGAAAC+TGG 0.416905 2.3:+52545699 MS.gene000075:CDS
TTTCTCATCTTTATCTGTGC+AGG 0.420439 2.3:-52547685 None:intergenic
ATGCAAGTATTTACCAGGAT+TGG 0.423165 2.3:-52546876 None:intergenic
TGCTATCATCATGCTTGTTA+CGG 0.424227 2.3:-52548067 None:intergenic
ATATTTGATGCTGCTGAAGT+TGG 0.426249 2.3:+52547085 MS.gene000075:CDS
ATTTAGAGCATGCTTGTGAA+TGG 0.431297 2.3:-52545690 None:intergenic
AAAGTATGGTGGCTTTGAAA+TGG 0.440299 2.3:-52543178 None:intergenic
TTTCCCATCATGACCAATCC+TGG 0.447122 2.3:+52546863 MS.gene000075:CDS
TGTTTATCCTAGCTTGATAT+GGG 0.447584 2.3:+52547138 MS.gene000075:CDS
AATCAGTTGACTACAAACTT+TGG 0.451937 2.3:+52543250 MS.gene000075:CDS
CAGTTTGTACCATCAAAGTA+TGG 0.454229 2.3:-52543192 None:intergenic
CAGCTATGTGTAATATAGTT+CGG 0.455111 2.3:-52547177 None:intergenic
TTTGTTTAACTCCTCCTTTG+AGG 0.460824 2.3:-52547038 None:intergenic
TCCTAGCTTGATATGGGATG+TGG 0.473173 2.3:+52547144 MS.gene000075:CDS
GGCACAATATAAAATATTTG+TGG 0.473702 2.3:-52543391 None:intergenic
TTTAAAGCTAATATGTGGAT+TGG 0.476951 2.3:+52548029 MS.gene000075:CDS
GGCTCAAAATCGAAATCCAT+TGG 0.480350 2.3:+52546808 MS.gene000075:CDS
ACCAATTCAAGTTGACTTCG+TGG 0.480782 2.3:-52547325 None:intergenic
CGTCGAGTTACTATGGTTTG+AGG 0.481581 2.3:+52547372 MS.gene000075:CDS
TAGGTAATGATCCAAGGAAA+AGG 0.484891 2.3:+52545648 MS.gene000075:intron
AAATGTGGGAGGAGCTTGAC+AGG 0.491407 2.3:+52543463 MS.gene000075:CDS
GCTGCTGCAACTACTTTACC+AGG 0.491983 2.3:+52547841 MS.gene000075:CDS
TTTAGAGCATGCTTGTGAAT+GGG 0.494360 2.3:-52545689 None:intergenic
TGAAATTGTTGACTTACTGT+TGG 0.501333 2.3:+52545931 MS.gene000075:CDS
TTCTTTGCTTGTATCTACAC+TGG 0.502845 2.3:+52546100 MS.gene000075:CDS
CCAGAGTCATCGGTACCGCC+TGG 0.504086 2.3:-52547859 None:intergenic
CTGCCTTTAAAGCTAATATG+TGG 0.505807 2.3:+52548024 MS.gene000075:CDS
TTGTTGACTTACTGTTGGAT+AGG 0.506682 2.3:+52545936 MS.gene000075:CDS
TGCAAAGCAGCATAGTGAAT+AGG 0.507877 2.3:-52546001 None:intergenic
ATTTCAACTGTCATTGCTAC+CGG 0.510096 2.3:+52547811 MS.gene000075:CDS
TTTACCAGGATTGGTCATGA+TGG 0.510349 2.3:-52546867 None:intergenic
ATGGACACAACCATCATTGA+AGG 0.511476 2.3:+52543150 MS.gene000075:CDS
AATGGACCTTCCTTCAATGA+TGG 0.514248 2.3:-52543160 None:intergenic
CATCAAATAGGGCATATTAA+GGG 0.516700 2.3:+52547235 MS.gene000075:CDS
GCATCAAATATTAGTTGAGA+AGG 0.516888 2.3:-52547073 None:intergenic
TGATGTCAGTTCTACATCTC+CGG 0.520389 2.3:+52543615 MS.gene000075:CDS
ACTCTACTGCATATTGCTGC+AGG 0.522077 2.3:+52545791 MS.gene000075:CDS
CGATGAAGATATGAAGAACA+TGG 0.528696 2.3:+52543353 MS.gene000075:CDS
ATAGCATTGCAAGATGTCAA+TGG 0.529118 2.3:+52545869 MS.gene000075:CDS
CCAAGTGCAATAAAGTGTTT+CGG 0.529862 2.3:-52547288 None:intergenic
TCTATGATGCGCTTAGCTGC+CGG 0.530764 2.3:-52545722 None:intergenic
ATTCACTATGCTGCTTTGCA+AGG 0.539160 2.3:+52546004 MS.gene000075:CDS
TGAAATTAGCATGCAAGACT+CGG 0.543920 2.3:-52547794 None:intergenic
TTCAAGTTGTCAGACAGCTA+AGG 0.544096 2.3:+52543440 MS.gene000075:CDS
CTCCTTTGAACTCCTGATAC+CGG 0.544411 2.3:-52543634 None:intergenic
TTACCAGGATTGGTCATGAT+GGG 0.546186 2.3:-52546866 None:intergenic
GTCAGACAGCTAAGGAAATG+TGG 0.547605 2.3:+52543448 MS.gene000075:CDS
AGAATGCTGCCATAACAAAT+GGG 0.551805 2.3:+52545762 MS.gene000075:CDS
ATGGTACAAACTGTACTGAA+TGG 0.560578 2.3:+52543202 MS.gene000075:CDS
CCAGGCGGTACCGATGACTC+TGG 0.565328 2.3:+52547859 MS.gene000075:CDS
TCCACATCCCATATCAAGCT+AGG 0.582284 2.3:-52547145 None:intergenic
TGCTCTAAATGGAAACTGGC+CGG 0.583428 2.3:+52545703 MS.gene000075:CDS
ACTCCTTCACAAAGTGAATG+TGG 0.592216 2.3:-52545820 None:intergenic
CATCTGATATTGCAAACACC+AGG 0.596756 2.3:-52547912 None:intergenic
TCAGACAGCTAAGGAAATGT+GGG 0.598421 2.3:+52543449 MS.gene000075:CDS
GCAGCAATATGCAGTAGAGT+AGG 0.598796 2.3:-52545788 None:intergenic
CTCCGGTATCAGGAGTTCAA+AGG 0.599681 2.3:+52543632 MS.gene000075:CDS
TTCTTCATAGTATACTACCA+TGG 0.609618 2.3:+52548102 MS.gene000075:CDS
CAGGAACCCACGTCGAACCA+TGG 0.611714 2.3:-52548119 None:intergenic
ATAAAGATGAGAAACTCTGA+AGG 0.617010 2.3:+52547694 MS.gene000075:CDS
TAAGAGAAAACGCAGAGTCG+TGG 0.621726 2.3:+52547758 MS.gene000075:CDS
CAATGACAACCAGAATCCAA+TGG 0.629676 2.3:-52546824 None:intergenic
AAGGAAGATGCAAAATGACA+TGG 0.640102 2.3:+52546023 MS.gene000075:CDS
AAACCACATTCACTTTGTGA+AGG 0.644048 2.3:+52545817 MS.gene000075:CDS
AGTTGCAGCAGCAAACACTC+CGG 0.666075 2.3:-52547830 None:intergenic
TTTGTACCATCAAAGTATGG+TGG 0.667673 2.3:-52543189 None:intergenic
GACAGCTAAGGAAATGTGGG+AGG 0.668158 2.3:+52543452 MS.gene000075:CDS
ACACAACCATCATTGAAGGA+AGG 0.672844 2.3:+52543154 MS.gene000075:CDS
TATACTACCATGGTTCGACG+TGG 0.679800 2.3:+52548112 MS.gene000075:CDS
AGACAAGAAAATCAATATCG+CGG 0.681208 2.3:-52547959 None:intergenic
AAAACACTACTCCTCAAAGG+AGG 0.690705 2.3:+52547027 MS.gene000075:CDS
ATACTACCATGGTTCGACGT+GGG 0.703497 2.3:+52548113 MS.gene000075:CDS
GCTTGTGAATGGGAACACAA+AGG 0.763925 2.3:-52545679 None:intergenic
GCTGCAACTACTTTACCAGG+CGG 0.805075 2.3:+52547844 MS.gene000075:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTTATAAAAAAAATTTA+GGG + chr2.3:52543785-52543804 MS.gene000075:intron 0.0%
!! TATATTTATAAAAAAAATTT+AGG + chr2.3:52543784-52543803 MS.gene000075:intron 0.0%
!! ATTCCAAAAAAATTAATAAA+TGG + chr2.3:52543297-52543316 MS.gene000075:CDS 10.0%
!! TTTAGTAACATTATAAAAAT+CGG + chr2.3:52546234-52546253 MS.gene000075:intron 10.0%
!!! ATTAATTTTTTTGGAATTTT+TGG - chr2.3:52543294-52543313 None:intergenic 10.0%
!! CTGAATAAAATGAATAAAAA+GGG - chr2.3:52547412-52547431 None:intergenic 15.0%
!! TAAATTGCTAACTTAAAAAA+GGG - chr2.3:52544377-52544396 None:intergenic 15.0%
!! TATATATATATACTCAATCA+TGG + chr2.3:52544217-52544236 MS.gene000075:intron 15.0%
!! TATCATGTCTAATATTTATT+AGG - chr2.3:52545097-52545116 None:intergenic 15.0%
!! TCTGAATAAAATGAATAAAA+AGG - chr2.3:52547413-52547432 None:intergenic 15.0%
!! TTAAATTGCTAACTTAAAAA+AGG - chr2.3:52544378-52544397 None:intergenic 15.0%
!!! ATCTTTAAATAGAATTTTAG+AGG - chr2.3:52546579-52546598 None:intergenic 15.0%
!!! CAACTTATAATAGTTTTTAT+TGG + chr2.3:52546499-52546518 MS.gene000075:intron 15.0%
!!! CTTTATTTATATAGTAGAAT+AGG - chr2.3:52547465-52547484 None:intergenic 15.0%
!!! TCTAAAATTCTATTTAAAGA+TGG + chr2.3:52546578-52546597 MS.gene000075:intron 15.0%
!! ACTCAAAATTCTATATTTAG+AGG - chr2.3:52546333-52546352 None:intergenic 20.0%
!! AGTATATAATTAGTAACAAC+TGG - chr2.3:52544024-52544043 None:intergenic 20.0%
!! ATATATGTTACAAAACATTC+AGG - chr2.3:52545052-52545071 None:intergenic 20.0%
!! CACTTATATTCTTTAATATG+TGG - chr2.3:52545163-52545182 None:intergenic 20.0%
!! TAGAAATAATTGTGAATGAT+CGG - chr2.3:52545517-52545536 None:intergenic 20.0%
!! TGCAACTAGTTAAAAAATAT+CGG + chr2.3:52546307-52546326 MS.gene000075:intron 20.0%
!! TTGTAAAATTAATCTGAGTT+GGG + chr2.3:52546434-52546453 MS.gene000075:intron 20.0%
!!! AAAATCGGTATTTAAAATGA+TGG + chr2.3:52546249-52546268 MS.gene000075:intron 20.0%
!!! ACATAAATCATATTTTTACC+AGG - chr2.3:52548255-52548274 None:intergenic 20.0%
!!! ATAAAAAAAATTTAGGGTGA+AGG + chr2.3:52543791-52543810 MS.gene000075:intron 20.0%
!!! ATGTATTGTTTGAATCATTT+TGG - chr2.3:52544581-52544600 None:intergenic 20.0%
!!! ATTTATATTTTGTCTTTGAC+AGG + chr2.3:52543578-52543597 MS.gene000075:intron 20.0%
!!! CGACCATTTATTAATTTTTT+TGG - chr2.3:52543303-52543322 None:intergenic 20.0%
!!! GTTTATTTTTACAATTATCC+TGG + chr2.3:52547491-52547510 MS.gene000075:intron 20.0%
!!! TAAAAAAAATTTAGGGTGAA+GGG + chr2.3:52543792-52543811 MS.gene000075:intron 20.0%
!!! TTTATATTTTGTCTTTGACA+GGG + chr2.3:52543579-52543598 MS.gene000075:intron 20.0%
!!! TTTGAAACTCTATCAAAAAA+AGG + chr2.3:52546392-52546411 MS.gene000075:intron 20.0%
!!! TTTTTAACTAGTTGCAAATT+TGG - chr2.3:52546303-52546322 None:intergenic 20.0%
! AAGATTTACACAATAATCAG+AGG + chr2.3:52544685-52544704 MS.gene000075:intron 25.0%
! ACAAGTATTCTATTTGATAC+AGG + chr2.3:52545389-52545408 MS.gene000075:intron 25.0%
! ATTACTATGTTGTAAAAACC+AGG - chr2.3:52547512-52547531 None:intergenic 25.0%
! CGGACAATAATATTTAAACA+TGG - chr2.3:52544083-52544102 None:intergenic 25.0%
! CTTGTAAAATTAATCTGAGT+TGG + chr2.3:52546433-52546452 MS.gene000075:intron 25.0%
! GAAAATATTGAAATGAAACC+AGG - chr2.3:52548141-52548160 None:intergenic 25.0%
! GATCAAATGAATGAAACATA+CGG - chr2.3:52544103-52544122 None:intergenic 25.0%
! GGCACAATATAAAATATTTG+TGG - chr2.3:52543394-52543413 None:intergenic 25.0%
! TAATATTTATTAGGCCCTTT+CGG - chr2.3:52545088-52545107 None:intergenic 25.0%
! TATGTTCAACTCTCTAATAT+TGG - chr2.3:52545419-52545438 None:intergenic 25.0%
! TCCAAAGAAATTTAACCAAT+TGG - chr2.3:52546994-52547013 None:intergenic 25.0%
! TCCAATTGGTTAAATTTCTT+TGG + chr2.3:52546990-52547009 MS.gene000075:CDS 25.0%
! TCTGATTATTGTGTAAATCT+TGG - chr2.3:52544686-52544705 None:intergenic 25.0%
! TTAGTTGAGAAGGTTTATTT+AGG - chr2.3:52547066-52547085 None:intergenic 25.0%
! TTGATGTTGAACTAAATTGT+CGG + chr2.3:52544482-52544501 MS.gene000075:intron 25.0%
!! AAACCTATGTACAAAAGTAT+TGG - chr2.3:52548171-52548190 None:intergenic 25.0%
!! AAATCACATTGTTTTCCAAT+TGG + chr2.3:52546976-52546995 MS.gene000075:CDS 25.0%
!! ATGTCAAGTATTGTAATGTT+TGG + chr2.3:52544895-52544914 MS.gene000075:intron 25.0%
!! TGTCAAGTATTGTAATGTTT+GGG + chr2.3:52544896-52544915 MS.gene000075:intron 25.0%
!! TTTAAAGCTAATATGTGGAT+TGG + chr2.3:52548029-52548048 MS.gene000075:CDS 25.0%
!! TTTATATTGCTATTGACACA+GGG - chr2.3:52547593-52547612 None:intergenic 25.0%
!!! AACCTATGTACAAAAGTATT+GGG - chr2.3:52548170-52548189 None:intergenic 25.0%
!!! AATCCACATATTAGCTTTAA+AGG - chr2.3:52548030-52548049 None:intergenic 25.0%
!!! AGAATTTTGAGTAGTTCATA+TGG + chr2.3:52546341-52546360 MS.gene000075:intron 25.0%
!!! ATATTGTAATGGATCATGAT+AGG + chr2.3:52544929-52544948 MS.gene000075:intron 25.0%
!!! ATTGAGTGAGCTTTTTAAAA+AGG + chr2.3:52545290-52545309 MS.gene000075:intron 25.0%
!!! TATTGTAATGGATCATGATA+GGG + chr2.3:52544930-52544949 MS.gene000075:intron 25.0%
!!! TTGAGTGAGCTTTTTAAAAA+GGG + chr2.3:52545291-52545310 MS.gene000075:intron 25.0%
!!! TTGATTTTGAGACAAATATG+TGG + chr2.3:52547532-52547551 MS.gene000075:intron 25.0%
!!! TTTTATATTGCTATTGACAC+AGG - chr2.3:52547594-52547613 None:intergenic 25.0%
AAAAGACAACAGATCTTGTA+TGG - chr2.3:52544639-52544658 None:intergenic 30.0%
AAACTATTAGTCGCTAATGT+TGG - chr2.3:52546217-52546236 None:intergenic 30.0%
AATAGTACATGTAGTGATCT+AGG + chr2.3:52545576-52545595 MS.gene000075:intron 30.0%
AATCAGTTGACTACAAACTT+TGG + chr2.3:52543250-52543269 MS.gene000075:CDS 30.0%
ACATCAAATAGGGCATATTA+AGG + chr2.3:52547234-52547253 MS.gene000075:CDS 30.0%
ACTCACAATTACCTGTAAAA+AGG + chr2.3:52545960-52545979 MS.gene000075:CDS 30.0%
AGACAAGAAAATCAATATCG+CGG - chr2.3:52547962-52547981 None:intergenic 30.0%
AGATTTGATATGTCGACATT+AGG + chr2.3:52545442-52545461 MS.gene000075:intron 30.0%
AGTTAATGCAAGTATTTACC+AGG - chr2.3:52546884-52546903 None:intergenic 30.0%
ATAAAGATGAGAAACTCTGA+AGG + chr2.3:52547694-52547713 MS.gene000075:CDS 30.0%
ATAAATGACATGTTTCCATG+CGG + chr2.3:52544812-52544831 MS.gene000075:intron 30.0%
ATACCTAAAAAGTAACCGAA+AGG + chr2.3:52545070-52545089 MS.gene000075:intron 30.0%
CAGCTATGTGTAATATAGTT+CGG - chr2.3:52547180-52547199 None:intergenic 30.0%
CATCAAATAGGGCATATTAA+GGG + chr2.3:52547235-52547254 MS.gene000075:CDS 30.0%
CCTTAAAAATGGTAAGAAAC+AGG + chr2.3:52546732-52546751 MS.gene000075:CDS 30.0%
CTCACAATTACCTGTAAAAA+GGG + chr2.3:52545961-52545980 MS.gene000075:CDS 30.0%
CTTAAGATCATCTGGATTAA+TGG - chr2.3:52543415-52543434 None:intergenic 30.0%
GAAATTCTCTTAAGATCATC+TGG - chr2.3:52543423-52543442 None:intergenic 30.0%
GCATCAAATATTAGTTGAGA+AGG - chr2.3:52547076-52547095 None:intergenic 30.0%
GTTCTTAGATCTGGAAATTA+CGG - chr2.3:52543919-52543938 None:intergenic 30.0%
TAAATTGTCGGATAGGTATA+AGG + chr2.3:52544494-52544513 MS.gene000075:intron 30.0%
TACCTAAAAAGTAACCGAAA+GGG + chr2.3:52545071-52545090 MS.gene000075:intron 30.0%
TACCTAAAACAAAGGTTCAA+TGG - chr2.3:52545634-52545653 None:intergenic 30.0%
TAGTTGCAATTCAGAAGTTA+TGG - chr2.3:52546675-52546694 None:intergenic 30.0%
TATGTTACAAAACATTCAGG+AGG - chr2.3:52545049-52545068 None:intergenic 30.0%
TCAATCTCGTACATCAAATA+GGG + chr2.3:52547224-52547243 MS.gene000075:CDS 30.0%
TCACAATTACCTGTAAAAAG+GGG + chr2.3:52545962-52545981 MS.gene000075:CDS 30.0%
TCATTTACTCAACCTACTAT+TGG + chr2.3:52548214-52548233 MS.gene000075:intron 30.0%
TCATTTATGGTACTAGAGTT+CGG - chr2.3:52544800-52544819 None:intergenic 30.0%
TGCATCTTCAAAACAATGTA+TGG - chr2.3:52546065-52546084 None:intergenic 30.0%
TGGATCATTACCTAAAACAA+AGG - chr2.3:52545642-52545661 None:intergenic 30.0%
TGTTTATCCTAGCTTGATAT+GGG + chr2.3:52547138-52547157 MS.gene000075:CDS 30.0%
TTCAATCTCGTACATCAAAT+AGG + chr2.3:52547223-52547242 MS.gene000075:CDS 30.0%
TTCTTAGATCTGGAAATTAC+GGG - chr2.3:52543918-52543937 None:intergenic 30.0%
TTCTTCATAGTATACTACCA+TGG + chr2.3:52548102-52548121 MS.gene000075:CDS 30.0%
TTTATGTACTAGAGAAGTAG+TGG + chr2.3:52548268-52548287 MS.gene000075:intron 30.0%
TTTGACTAAAACATCATTCC+TGG + chr2.3:52547894-52547913 MS.gene000075:CDS 30.0%
! TAAATGTTCTTTGAGTTCGA+AGG - chr2.3:52543846-52543865 None:intergenic 30.0%
! TATTGTGACTGATTTAGAGA+CGG + chr2.3:52546173-52546192 MS.gene000075:intron 30.0%
! TGAACAACATACGAGATTTT+GGG + chr2.3:52544864-52544883 MS.gene000075:intron 30.0%
! TTGAACAACATACGAGATTT+TGG + chr2.3:52544863-52544882 MS.gene000075:intron 30.0%
! TTTAAGGCTAAATCTGCAAT+TGG - chr2.3:52546719-52546738 None:intergenic 30.0%
!! CCTGTTTCTTACCATTTTTA+AGG - chr2.3:52546735-52546754 None:intergenic 30.0%
!! TGAAATTGTTGACTTACTGT+TGG + chr2.3:52545931-52545950 MS.gene000075:CDS 30.0%
!! TGAGTGAGCTTTTTAAAAAG+GGG + chr2.3:52545292-52545311 MS.gene000075:intron 30.0%
!! TGCAGATTTAGCCTTAAAAA+TGG + chr2.3:52546721-52546740 MS.gene000075:intron 30.0%
!!! GATGTTTTAGTCAAATAGTG+TGG - chr2.3:52547889-52547908 None:intergenic 30.0%
!!! TTGTTTTAGGTAATGATCCA+AGG + chr2.3:52545642-52545661 MS.gene000075:intron 30.0%
AAAACGACAGTTCTTAGATC+TGG - chr2.3:52543928-52543947 None:intergenic 35.0%
AAAAGAGATGAGCTTGTCAA+GGG + chr2.3:52544754-52544773 MS.gene000075:intron 35.0%
AAACCACATTCACTTTGTGA+AGG + chr2.3:52545817-52545836 MS.gene000075:CDS 35.0%
AAGAATGCTGCCATAACAAA+TGG + chr2.3:52545761-52545780 MS.gene000075:CDS 35.0%
AAGGAAGATGCAAAATGACA+TGG + chr2.3:52546023-52546042 MS.gene000075:CDS 35.0%
AATCGAAATCCATTGGATTC+TGG + chr2.3:52546815-52546834 MS.gene000075:CDS 35.0%
ACAATACATTAGCTACTCCT+CGG + chr2.3:52544592-52544611 MS.gene000075:intron 35.0%
AGAATGCTGCCATAACAAAT+GGG + chr2.3:52545762-52545781 MS.gene000075:CDS 35.0%
AGTAGTTCATATGGTCTATG+TGG + chr2.3:52546350-52546369 MS.gene000075:intron 35.0%
ATAGCATTGCAAGATGTCAA+TGG + chr2.3:52545869-52545888 MS.gene000075:CDS 35.0%
ATATTTGATGCTGCTGAAGT+TGG + chr2.3:52547085-52547104 MS.gene000075:CDS 35.0%
ATGCAAGTATTTACCAGGAT+TGG - chr2.3:52546879-52546898 None:intergenic 35.0%
ATGGGAAAATGATCATGTTC+AGG - chr2.3:52546851-52546870 None:intergenic 35.0%
ATGGTACAAACTGTACTGAA+TGG + chr2.3:52543202-52543221 MS.gene000075:CDS 35.0%
ATTTCAACTGTCATTGCTAC+CGG + chr2.3:52547811-52547830 MS.gene000075:CDS 35.0%
CAGTTTGTACCATCAAAGTA+TGG - chr2.3:52543195-52543214 None:intergenic 35.0%
CGATGAAGATATGAAGAACA+TGG + chr2.3:52543353-52543372 MS.gene000075:CDS 35.0%
GAAGAAATTATCTAGCACGA+AGG - chr2.3:52544999-52545018 None:intergenic 35.0%
GTGTTTATCCTAGCTTGATA+TGG + chr2.3:52547137-52547156 MS.gene000075:CDS 35.0%
GTTGAACTAAATTGTCGGAT+AGG + chr2.3:52544487-52544506 MS.gene000075:intron 35.0%
TAAAAGAGATGAGCTTGTCA+AGG + chr2.3:52544753-52544772 MS.gene000075:intron 35.0%
TAAATGACATGTTTCCATGC+GGG + chr2.3:52544813-52544832 MS.gene000075:intron 35.0%
TAGGTAATGATCCAAGGAAA+AGG + chr2.3:52545648-52545667 MS.gene000075:intron 35.0%
TGAAAAACACTACTCCTCAA+AGG + chr2.3:52547024-52547043 MS.gene000075:CDS 35.0%
TGAAATTAGCATGCAAGACT+CGG - chr2.3:52547797-52547816 None:intergenic 35.0%
TTCTTTGCTTGTATCTACAC+TGG + chr2.3:52546100-52546119 MS.gene000075:CDS 35.0%
TTTAAATATGCTAGCCACTC+TGG - chr2.3:52543555-52543574 None:intergenic 35.0%
TTTCTCATCTTTATCTGTGC+AGG - chr2.3:52547688-52547707 None:intergenic 35.0%
TTTGAGCGATTTACCATCAT+CGG + chr2.3:52546623-52546642 MS.gene000075:intron 35.0%
TTTGTACCATCAAAGTATGG+TGG - chr2.3:52543192-52543211 None:intergenic 35.0%
TTTGTTTAACTCCTCCTTTG+AGG - chr2.3:52547041-52547060 None:intergenic 35.0%
! AGATAGAGTACTCCAATAGT+AGG - chr2.3:52548229-52548248 None:intergenic 35.0%
! AGCTCACTCAATGATCATTT+TGG - chr2.3:52545282-52545301 None:intergenic 35.0%
! AGTCAACTTGAATTGGTTTC+TGG + chr2.3:52547331-52547350 MS.gene000075:CDS 35.0%
! ATATCCAATGCTGCTTATGT+TGG - chr2.3:52546650-52546669 None:intergenic 35.0%
! ATTCACAAGCATGCTCTAAA+TGG + chr2.3:52545692-52545711 MS.gene000075:CDS 35.0%
! ATTTAGAGCATGCTTGTGAA+TGG - chr2.3:52545693-52545712 None:intergenic 35.0%
! CCAAGTGCAATAAAGTGTTT+CGG - chr2.3:52547291-52547310 None:intergenic 35.0%
! CTCCCAATACTTTTGTACAT+AGG + chr2.3:52548165-52548184 MS.gene000075:intron 35.0%
! CTGTTTCCTCTAAAAACTCA+AGG - chr2.3:52543687-52543706 None:intergenic 35.0%
! GCATGGAAACATGTCATTTA+TGG - chr2.3:52544813-52544832 None:intergenic 35.0%
! TCACTCAATGATCATTTTGG+AGG - chr2.3:52545279-52545298 None:intergenic 35.0%
! TCCTCTAAAAACTCAAGGTT+AGG - chr2.3:52543682-52543701 None:intergenic 35.0%
! TCTAGGTGGGTTTAATGTTA+AGG + chr2.3:52545593-52545612 MS.gene000075:intron 35.0%
! TGCTATCATCATGCTTGTTA+CGG - chr2.3:52548070-52548089 None:intergenic 35.0%
! TTTAGAGCATGCTTGTGAAT+GGG - chr2.3:52545692-52545711 None:intergenic 35.0%
!! AAAGTATGGTGGCTTTGAAA+TGG - chr2.3:52543181-52543200 None:intergenic 35.0%
!! ACCTAACCTTGAGTTTTTAG+AGG + chr2.3:52543678-52543697 MS.gene000075:CDS 35.0%
!! CTATGTACAAAAGTATTGGG+AGG - chr2.3:52548167-52548186 None:intergenic 35.0%
!! CTGCCTTTAAAGCTAATATG+TGG + chr2.3:52548024-52548043 MS.gene000075:CDS 35.0%
!! CTTGAGTTTTTAGAGGAAAC+AGG + chr2.3:52543685-52543704 MS.gene000075:CDS 35.0%
!! CTTTGGCTTGTGATTAAGAA+TGG + chr2.3:52543267-52543286 MS.gene000075:CDS 35.0%
!! TTGTTGACTTACTGTTGGAT+AGG + chr2.3:52545936-52545955 MS.gene000075:CDS 35.0%
!!! ATTGTTTTGAAGATGCAGAC+TGG + chr2.3:52546068-52546087 MS.gene000075:CDS 35.0%
!!! GGAGTAGTGTTTTTCAAGAA+TGG - chr2.3:52547020-52547039 None:intergenic 35.0%
!!! GTAGTGTTTTTCAAGAATGG+TGG - chr2.3:52547017-52547036 None:intergenic 35.0%
!!! TGCCATTGAACCTTTGTTTT+AGG + chr2.3:52545629-52545648 MS.gene000075:intron 35.0%
!!! TTGTTTTGAAGATGCAGACT+GGG + chr2.3:52546069-52546088 MS.gene000075:CDS 35.0%
AAAACACTACTCCTCAAAGG+AGG + chr2.3:52547027-52547046 MS.gene000075:CDS 40.0%
AAATGTGCGTCGAGTTACTA+TGG + chr2.3:52547365-52547384 MS.gene000075:CDS 40.0%
AACATCAGGGACCATGTATA+TGG + chr2.3:52545469-52545488 MS.gene000075:intron 40.0%
AATGGACCTTCCTTCAATGA+TGG - chr2.3:52543163-52543182 None:intergenic 40.0%
AATGTTTGACTCAACCAGAG+TGG + chr2.3:52543538-52543557 MS.gene000075:intron 40.0%
ACACAACCATCATTGAAGGA+AGG + chr2.3:52543154-52543173 MS.gene000075:CDS 40.0%
ACCACGAAGTCAACTTGAAT+TGG + chr2.3:52547324-52547343 MS.gene000075:CDS 40.0%
ACTCCTTCACAAAGTGAATG+TGG - chr2.3:52545823-52545842 None:intergenic 40.0%
AGCCAAAACAGTGGTCTAAT+CGG - chr2.3:52546541-52546560 None:intergenic 40.0%
AGGGACCATGTATATGGTTT+AGG + chr2.3:52545475-52545494 MS.gene000075:intron 40.0%
AGTACATGTAGTGATCTAGG+TGG + chr2.3:52545579-52545598 MS.gene000075:intron 40.0%
AGTATTGTAATGTTTGGGCG+AGG + chr2.3:52544901-52544920 MS.gene000075:intron 40.0%
ATGGACACAACCATCATTGA+AGG + chr2.3:52543150-52543169 MS.gene000075:CDS 40.0%
CAATGACAACCAGAATCCAA+TGG - chr2.3:52546827-52546846 None:intergenic 40.0%
CAATTACCTGTAAAAAGGGG+TGG + chr2.3:52545965-52545984 MS.gene000075:CDS 40.0%
CATCTGATATTGCAAACACC+AGG - chr2.3:52547915-52547934 None:intergenic 40.0%
CCGAAACACTTTATTGCACT+TGG + chr2.3:52547288-52547307 MS.gene000075:CDS 40.0%
CGTATGTTGTTCAACAAGTG+TGG - chr2.3:52544857-52544876 None:intergenic 40.0%
CTAACTCATTTCTGACCTGA+CGG - chr2.3:52545366-52545385 None:intergenic 40.0%
CTTGTATGGATCAAACACAG+AGG - chr2.3:52544625-52544644 None:intergenic 40.0%
GACATTAGGACGAAACATCA+GGG + chr2.3:52545456-52545475 MS.gene000075:intron 40.0%
GATAGATGCATGAAGAGAGT+AGG + chr2.3:52545113-52545132 MS.gene000075:intron 40.0%
GCGAGGTTGCAATATTGTAA+TGG + chr2.3:52544918-52544937 MS.gene000075:intron 40.0%
GGCTCAAAATCGAAATCCAT+TGG + chr2.3:52546808-52546827 MS.gene000075:CDS 40.0%
GTAACCATGTCTCTTATTGC+AGG + chr2.3:52546947-52546966 MS.gene000075:intron 40.0%
GTACATGTAGTGATCTAGGT+GGG + chr2.3:52545580-52545599 MS.gene000075:intron 40.0%
GTGGCGACAATGCTAAAAAA+TGG + chr2.3:52546369-52546388 MS.gene000075:intron 40.0%
TCAAAGCCACCATACTTTGA+TGG + chr2.3:52543183-52543202 MS.gene000075:CDS 40.0%
TCAGACAGCTAAGGAAATGT+GGG + chr2.3:52543449-52543468 MS.gene000075:CDS 40.0%
TCGCTCCTAAACCATATACA+TGG - chr2.3:52545483-52545502 None:intergenic 40.0%
TCTATTCTTGTCTCGCGTTA+TGG + chr2.3:52547979-52547998 MS.gene000075:CDS 40.0%
TGATGTCAGTTCTACATCTC+CGG + chr2.3:52543615-52543634 MS.gene000075:CDS 40.0%
TGCAAAGCAGCATAGTGAAT+AGG - chr2.3:52546004-52546023 None:intergenic 40.0%
TGTACATCCATCTCAATGTG+TGG + chr2.3:52544458-52544477 MS.gene000075:intron 40.0%
TGTATATGGTTTAGGAGCGA+AGG + chr2.3:52545483-52545502 MS.gene000075:intron 40.0%
TGTATCTACACTGGCATCTA+TGG + chr2.3:52546109-52546128 MS.gene000075:CDS 40.0%
TTACCTTACAGCCAAAACAG+TGG - chr2.3:52546550-52546569 None:intergenic 40.0%
! AGCATGCTCTAAATGGAAAC+TGG + chr2.3:52545699-52545718 MS.gene000075:CDS 40.0%
! AGTAGGATGCCCATTTGTTA+TGG - chr2.3:52545774-52545793 None:intergenic 40.0%
! GCTGCTGAAGTTGGAAATTT+TGG + chr2.3:52547094-52547113 MS.gene000075:CDS 40.0%
! GGAAACAACAAGAGCGTAAA+AGG - chr2.3:52545258-52545277 None:intergenic 40.0%
! GTCAACTTCAAGTTTCGCTA+CGG - chr2.3:52544307-52544326 None:intergenic 40.0%
! TCAACTTCAAGTTTCGCTAC+GGG - chr2.3:52544306-52544325 None:intergenic 40.0%
! TGTAGGTCATGGATTGAAAG+AGG + chr2.3:52544968-52544987 MS.gene000075:intron 40.0%
!! ACCAATTCAAGTTGACTTCG+TGG - chr2.3:52547328-52547347 None:intergenic 40.0%
!! AGTTGGGTTGACGAAAAACA+AGG + chr2.3:52546450-52546469 MS.gene000075:intron 40.0%
!! ATTCACTATGCTGCTTTGCA+AGG + chr2.3:52546004-52546023 MS.gene000075:CDS 40.0%
!! CCTCACTCTAAAAGCACTAT+CGG + chr2.3:52543884-52543903 MS.gene000075:intron 40.0%
!! GTTGGGTTGACGAAAAACAA+GGG + chr2.3:52546451-52546470 MS.gene000075:intron 40.0%
!! TTACCAGGATTGGTCATGAT+GGG - chr2.3:52546869-52546888 None:intergenic 40.0%
!! TTCAAGTTGTCAGACAGCTA+AGG + chr2.3:52543440-52543459 MS.gene000075:CDS 40.0%
!! TTTACCAGGATTGGTCATGA+TGG - chr2.3:52546870-52546889 None:intergenic 40.0%
!!! GTTCGAAGGTATTTTCTGTG+TGG - chr2.3:52543832-52543851 None:intergenic 40.0%
ACTCTACTGCATATTGCTGC+AGG + chr2.3:52545791-52545810 MS.gene000075:CDS 45.0%
AGTTCTACATCTCCGGTATC+AGG + chr2.3:52543622-52543641 MS.gene000075:CDS 45.0%
ATACTACCATGGTTCGACGT+GGG + chr2.3:52548113-52548132 MS.gene000075:CDS 45.0%
ATTGACACAGGGCAAACACA+TGG - chr2.3:52547582-52547601 None:intergenic 45.0%
CAATCCATGACCTACACTAG+TGG - chr2.3:52544964-52544983 None:intergenic 45.0%
CATCAAGCCACACATTGAGA+TGG - chr2.3:52544468-52544487 None:intergenic 45.0%
CATGCCTGCAATAAGAGACA+TGG - chr2.3:52546954-52546973 None:intergenic 45.0%
CCTGTAAAAAGGGGTGGAAA+TGG + chr2.3:52545971-52545990 MS.gene000075:CDS 45.0%
CGACATTAGGACGAAACATC+AGG + chr2.3:52545455-52545474 MS.gene000075:intron 45.0%
CGTCGAGTTACTATGGTTTG+AGG + chr2.3:52547372-52547391 MS.gene000075:CDS 45.0%
CTCCTTTGAACTCCTGATAC+CGG - chr2.3:52543637-52543656 None:intergenic 45.0%
GCAGCAATATGCAGTAGAGT+AGG - chr2.3:52545791-52545810 None:intergenic 45.0%
GCTTGTGAATGGGAACACAA+AGG - chr2.3:52545682-52545701 None:intergenic 45.0%
GTCAGACAGCTAAGGAAATG+TGG + chr2.3:52543448-52543467 MS.gene000075:CDS 45.0%
GTTACCACTAGTGTAGGTCA+TGG + chr2.3:52544957-52544976 MS.gene000075:intron 45.0%
TAAGAGAAAACGCAGAGTCG+TGG + chr2.3:52547758-52547777 MS.gene000075:CDS 45.0%
TAATACAATGCATGCCCGCA+TGG - chr2.3:52544830-52544849 None:intergenic 45.0%
TATACTACCATGGTTCGACG+TGG + chr2.3:52548112-52548131 MS.gene000075:CDS 45.0%
TCCACATCCCATATCAAGCT+AGG - chr2.3:52547148-52547167 None:intergenic 45.0%
TCCTAGCTTGATATGGGATG+TGG + chr2.3:52547144-52547163 MS.gene000075:CDS 45.0%
TGCTTATGTTGGACCGATGA+TGG - chr2.3:52546639-52546658 None:intergenic 45.0%
TTTCCCATCATGACCAATCC+TGG + chr2.3:52546863-52546882 MS.gene000075:CDS 45.0%
! AACTTCAAGTTTCGCTACGG+GGG - chr2.3:52544304-52544323 None:intergenic 45.0%
! AGGCTGAGAAACCTTTTCCT+TGG - chr2.3:52545662-52545681 None:intergenic 45.0%
! CAACTTCAAGTTTCGCTACG+GGG - chr2.3:52544305-52544324 None:intergenic 45.0%
! CCATTTCCACCCCTTTTTAC+AGG - chr2.3:52545974-52545993 None:intergenic 45.0%
! CGAGATAGCTTTGCATCTCT+TGG + chr2.3:52546787-52546806 MS.gene000075:CDS 45.0%
! CTTTTACAGACGCATACAGC+TGG - chr2.3:52544739-52544758 None:intergenic 45.0%
! GTGTGGTTTTCCAGAGTCAT+CGG - chr2.3:52547872-52547891 None:intergenic 45.0%
! TGCTCTAAATGGAAACTGGC+CGG + chr2.3:52545703-52545722 MS.gene000075:CDS 45.0%
! TGGAGTACTCTATCTAAGCC+TGG + chr2.3:52548234-52548253 MS.gene000075:intron 45.0%
!! CACCGATTAGACCACTGTTT+TGG + chr2.3:52546536-52546555 MS.gene000075:intron 45.0%
!! GGCTTTGTTACCACTAGTGT+AGG + chr2.3:52544951-52544970 MS.gene000075:intron 45.0%
!!! AGACCACTGTTTTGGCTGTA+AGG + chr2.3:52546544-52546563 MS.gene000075:intron 45.0%
!!! CCGATAGTGCTTTTAGAGTG+AGG - chr2.3:52543887-52543906 None:intergenic 45.0%
!!! GGCCCTTTCGGTTACTTTTT+AGG - chr2.3:52545076-52545095 None:intergenic 45.0%
!!! TTTTTTTAATTCTTTTAAAT+TGG + chr2.3:52546910-52546929 MS.gene000075:intron 5.0%
AAATGTGGGAGGAGCTTGAC+AGG + chr2.3:52543463-52543482 MS.gene000075:CDS 50.0%
AACACAGAGGCTGAATACCG+AGG - chr2.3:52544612-52544631 None:intergenic 50.0%
ACAGACGCATACAGCTGGAA+TGG - chr2.3:52544734-52544753 None:intergenic 50.0%
ACAGGGCAAACACATGGAGA+GGG - chr2.3:52547576-52547595 None:intergenic 50.0%
AGAGATGAGCTTGTCAAGGG+AGG + chr2.3:52544757-52544776 MS.gene000075:intron 50.0%
AGTTGCAGCAGCAAACACTC+CGG - chr2.3:52547833-52547852 None:intergenic 50.0%
ATGAGCTTGTCAAGGGAGGA+GGG + chr2.3:52544761-52544780 MS.gene000075:intron 50.0%
CGGTCCAACATAAGCAGCAT+TGG + chr2.3:52546643-52546662 MS.gene000075:intron 50.0%
CTCCGGTATCAGGAGTTCAA+AGG + chr2.3:52543632-52543651 MS.gene000075:CDS 50.0%
GACAGCTAAGGAAATGTGGG+AGG + chr2.3:52543452-52543471 MS.gene000075:CDS 50.0%
GCAAGCAACTTCTTCACGCA+CGG + chr2.3:52544433-52544452 MS.gene000075:intron 50.0%
GCTGCAACTACTTTACCAGG+CGG + chr2.3:52547844-52547863 MS.gene000075:CDS 50.0%
GCTGCTGCAACTACTTTACC+AGG + chr2.3:52547841-52547860 MS.gene000075:CDS 50.0%
TCTATGATGCGCTTAGCTGC+CGG - chr2.3:52545725-52545744 None:intergenic 50.0%
! CATCTCCACGAGAGCGTAAA+AGG - chr2.3:52545207-52545226 None:intergenic 50.0%
! TGAAGCCTTTTACGCTCTCG+TGG + chr2.3:52545199-52545218 MS.gene000075:intron 50.0%
! TTTTGCTTTGCTGCTGCAGC+TGG + chr2.3:52545902-52545921 MS.gene000075:CDS 50.0%
ACAGATTTGTGAGCCCACCG+TGG + chr2.3:52545331-52545350 MS.gene000075:intron 55.0%
CAAGGGAGGAGGGATACATG+TGG + chr2.3:52544771-52544790 MS.gene000075:intron 55.0%
CACAGGGCAAACACATGGAG+AGG - chr2.3:52547577-52547596 None:intergenic 55.0%
GATGAGCTTGTCAAGGGAGG+AGG + chr2.3:52544760-52544779 MS.gene000075:intron 55.0%
ACGGATGCGTATGCCACGGT+GGG - chr2.3:52545347-52545366 None:intergenic 60.0%
CAGGAACCCACGTCGAACCA+TGG - chr2.3:52548122-52548141 None:intergenic 60.0%
CATGGTTCGACGTGGGTTCC+TGG + chr2.3:52548120-52548139 MS.gene000075:CDS 60.0%
GGGAGGAGGGATACATGTGG+AGG + chr2.3:52544774-52544793 MS.gene000075:intron 60.0%
! CCTGACGGATGCGTATGCCA+CGG - chr2.3:52545351-52545370 None:intergenic 60.0%
CCAGAGTCATCGGTACCGCC+TGG - chr2.3:52547862-52547881 None:intergenic 65.0%
CCGTGGCATACGCATCCGTC+AGG + chr2.3:52545348-52545367 MS.gene000075:intron 65.0%
GACGGATGCGTATGCCACGG+TGG - chr2.3:52545348-52545367 None:intergenic 65.0%
!! CCAGGCGGTACCGATGACTC+TGG + chr2.3:52547859-52547878 MS.gene000075:CDS 65.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 52543150 52548335 52543150 ID=MS.gene000075
chr2.3 mRNA 52543150 52548335 52543150 ID=MS.gene000075.t1;Parent=MS.gene000075
chr2.3 exon 52543150 52543484 52543150 ID=MS.gene000075.t1.exon1;Parent=MS.gene000075.t1
chr2.3 CDS 52543150 52543484 52543150 ID=cds.MS.gene000075.t1;Parent=MS.gene000075.t1
chr2.3 exon 52543600 52543706 52543600 ID=MS.gene000075.t1.exon2;Parent=MS.gene000075.t1
chr2.3 CDS 52543600 52543706 52543600 ID=cds.MS.gene000075.t1;Parent=MS.gene000075.t1
chr2.3 exon 52545651 52546130 52545651 ID=MS.gene000075.t1.exon3;Parent=MS.gene000075.t1
chr2.3 CDS 52545651 52546130 52545651 ID=cds.MS.gene000075.t1;Parent=MS.gene000075.t1
chr2.3 exon 52546726 52546884 52546726 ID=MS.gene000075.t1.exon4;Parent=MS.gene000075.t1
chr2.3 CDS 52546726 52546884 52546726 ID=cds.MS.gene000075.t1;Parent=MS.gene000075.t1
chr2.3 exon 52546969 52547393 52546969 ID=MS.gene000075.t1.exon5;Parent=MS.gene000075.t1
chr2.3 CDS 52546969 52547393 52546969 ID=cds.MS.gene000075.t1;Parent=MS.gene000075.t1
chr2.3 exon 52547664 52548141 52547664 ID=MS.gene000075.t1.exon6;Parent=MS.gene000075.t1
chr2.3 CDS 52547664 52548141 52547664 ID=cds.MS.gene000075.t1;Parent=MS.gene000075.t1
chr2.3 exon 52548328 52548335 52548328 ID=MS.gene000075.t1.exon7;Parent=MS.gene000075.t1
chr2.3 CDS 52548328 52548335 52548328 ID=cds.MS.gene000075.t1;Parent=MS.gene000075.t1
Gene Sequence

>MS.gene000075

ATGGACACAACCATCATTGAAGGAAGGTCCATTTCAAAGCCACCATACTTTGATGGTACAAACTGTACTGAATGGAAAGAGCGTACAAAGATATTCATACAATCAGTTGACTACAAACTTTGGCTTGTGATTAAGAATGGACCAAAAATTCCAAAAAAATTAATAAATGGTCGAGAAGTGTTGAAATCTGAAGATGAATTCAACGATGAAGATATGAAGAACATGGAACAAGAAGCAAAAGCCACAAATATTTTATATTGTGCCATTAATCCAGATGATCTTAAGAGAATTTCAAGTTGTCAGACAGCTAAGGAAATGTGGGAGGAGCTTGACAGGTTAAGTGTTTATGTTGTTCAAAATTTGATTTGTGTTTAGTTAGTTGTGTGTTAATGTTTGACTCAACCAGAGTGGCTAGCATATTTAAAGATATTTATATTTTGTCTTTGACAGGGAAGTGACATCATCTGATGTCAGTTCTACATCTCCGGTATCAGGAGTTCAAAGGAGTGCATCAGCAACATACAACAGACCTAACCTTGAGTTTTTAGAGGAAACAGGTATGTTTCTATCTCTTTCATTTTGTACTTTAGATACAAATAATGTAGCTATCTCTCTTTTTTTACTTTCTATTTTTTATATTTATAAAAAAAATTTAGGGTGAAGGGATAATGTTACTGTTCCACACAGAAAATACCTTCGAACTCAAAGAACATTTACAAATGTATTTACATTTACCTCACTCTAAAAGCACTATCGGAGCTTGAACCCGTAATTTCCAGATCTAAGAACTGTCGTTTTACAACTATATATATCAAACATTTGAAGTTAGAACGTAGCGATCTATAGAGAAAGAAACAAAAGTTTATCATATCCAGTTGTTACTAATTATATACTATTTTCAAAATCTACTACTATAATATTAATATTAGTCCATGTTTAAATATTATTGTCCGTATGTTTCATTCATTTGATCAGTGATATATCTGTACACAAAATAGTTTTCTATTTGTCTCATATTGTCATGAGTTATTATCAAATGCTAATAATATACTTGTCTCATATATATATATATATATATACTCAATCATGGACTAATCATTCACAATTATTTATAATAATGTACACATTAATACATAAGATATTCTAATACACCCCCGTAGCGAAACTTGAAGTTGACAGATTTTGAGACTATCTCTAAAATCATCAAAGAGTTGCAATAAAAGTCCCTTTTTTAAGTTAGCAATTTAATAACGAGAGTGAATGTGTAAGAGACACACTTGATCGCAAGCAACTTCTTCACGCACGGAGTGTACATCCATCTCAATGTGTGGCTTGATGTTGAACTAAATTGTCGGATAGGTATAAGGCGCTTACGTTATCACAATAGACAAAAGTAACTCTTGTAAGTTCTTAAAGTAAGTTTCTAATCCAAAATGATTCAAACAATACATTAGCTACTCCTCGGTATTCAGCCTCTGTGTTTGATCCATACAAGATCTGTTGTCTTTTTGCATACGATGAGATTAAATTATTCCAAGATTTACACAATAATCAGAGGTAGATCTTCTTGTGTCTTGACATCCATTCCAGCTGTATGCGTCTGTAAAAGAGATGAGCTTGTCAAGGGAGGAGGGATACATGTGGAGGCCGAACTCTAGTACCATAAATGACATGTTTCCATGCGGGCATGCATTGTATTAACAACCACACTTGTTGAACAACATACGAGATTTTGGGTCTTGTAAATGTCAAGTATTGTAATGTTTGGGCGAGGTTGCAATATTGTAATGGATCATGATAGGGCTTTGTTACCACTAGTGTAGGTCATGGATTGAAAGAGGTCATACCTTCGTGCTAGATAATTTCTTCTACATATTTCTTTTGAAGAGAAAAATGCCTCCTGAATGTTTTGTAACATATATACCTAAAAAGTAACCGAAAGGGCCTAATAAATATTAGACATGATAGATGCATGAAGAGAGTAGGAAGAAGCAACAAGAATAATGACATCCACATATTAAAGAATATAAGTGAAGTCACTGCGCAACTTGAAGCCTTTTACGCTCTCGTGGAGATGAAGATAGAGTTGTCTGCTCAACTTGAAGCCTTTTACGCTCTTGTTGTTTCCTCCAAAATGATCATTGAGTGAGCTTTTTAAAAAGGGGAAAATGAGTCTTCGTGACAGATTTGTGAGCCCACCGTGGCATACGCATCCGTCAGGTCAGAAATGAGTTAGAGAACAAGTATTCTATTTGATACAGGAGAACCAATATTAGAGAGTTGAACATAGAGAGATTTGATATGTCGACATTAGGACGAAACATCAGGGACCATGTATATGGTTTAGGAGCGAAGGATCATTGACCGATCATTCACAATTATTTCTAATAATATAAGCATTAATATTTAACATATTATAATATTCTAATAGTACATGTAGTGATCTAGGTGGGTTTAATGTTAAGGCAATATAATTAACTGCCATTGAACCTTTGTTTTAGGTAATGATCCAAGGAAAAGGTTTCTCAGCCTTTGTGTTCCCATTCACAAGCATGCTCTAAATGGAAACTGGCCGGCAGCTAAGCGCATCATAGACAAAGAGAATAAGCTCAAGAATGCTGCCATAACAAATGGGCATCCTACTCTACTGCATATTGCTGCAGGTGCAAACCACATTCACTTTGTGAAGGAGTTATTGAATATGCTTGATGACAAAGATATAGCATTGCAAGATGTCAATGGAAACACTGCTTTTTGCTTTGCTGCTGCAGCTGGAAACATTGAAATTGTTGACTTACTGTTGGATAGGAACTCACAATTACCTGTAAAAAGGGGTGGAAATGGAAATACTCCTATTCACTATGCTGCTTTGCAAGGAAGATGCAAAATGACATGGCATCTATATGATAAAACCATACATTGTTTTGAAGATGCAGACTGGGATTTATTGTTCTTTGCTTGTATCTACACTGGCATCTATGGTAAGTATTACTAACAGTTGAAATTCATTATTAAAACTATCATATTGTGACTGATTTAGAGACGGAAGTTGTCAAATCGATTGCCAACATTAGCGACTAATAGTTTAGTAACATTATAAAAATCGGTATTTAAAATGATGGCAAATTAATTTTGCAACTGATTGAGCGACCAAATTTGCAACTAGTTAAAAAATATCGGCCTCTAAATATAGAATTTTGAGTAGTTCATATGGTCTATGTGGCGACAATGCTAAAAAATGGTTTGAAACTCTATCAAAAAAAGGTATTGTTGTAAGTATCAGCTTGTAAAATTAATCTGAGTTGGGTTGACGAAAAACAAGGGAAACACGTATCAATAACATATTACACAACTTATAATAGTTTTTATTGGCTTTGTAAAATCAACACCGATTAGACCACTGTTTTGGCTGTAAGGTAATTGAAGCCTCTAAAATTCTATTTAAAGATGGCAACTTCAGTTGTCGTCTAAGTTTTGAGCGATTTACCATCATCGGTCCAACATAAGCAGCATTGGATATTTCCATAACTTCTGAATTGCAACTATATTGATGAATATAATTTTTTCCAATTGCAGATTTAGCCTTAAAAATGGTAAGAAACAGGAATGCACTAGCTTTTGCACGAGATGTGAATGACGAGATAGCTTTGCATCTCTTGGCTCAAAATCGAAATCCATTGGATTCTGGTTGTCATTGTCCTGAACATGATCATTTTCCCATCATGACCAATCCTGGTAAATACTTGCATTAACTTTTATATTTTTTTAATTCTTTTAAATTGGTTTCATTAACTTAAGTAACCATGTCTCTTATTGCAGGCATGAAAAATCACATTGTTTTCCAATTGGTTAAATTTCTTTGGACCACCATTCTTGAAAAACACTACTCCTCAAAGGAGGAGTTAAACAAAATCCTAAATAAACCTTCTCAACTAATATTTGATGCTGCTGAAGTTGGAAATTTTGGATTCTTATCAGAGCTTCTCAGTGTTTATCCTAGCTTGATATGGGATGTGGATAGCAAAAACCGAACTATATTACACATAGCTGTCTTGCATCGACATGCTAGTATCTTCAATCTCGTACATCAAATAGGGCATATTAAGGGTATCATAGTAACATATGAAGATGATAATGACCGAAACACTTTATTGCACTTGGCTGCAAAATTAGCACCACGAAGTCAACTTGAATTGGTTTCTGGAGCTGCTTTTCAAATGTGCGTCGAGTTACTATGGTTTGAGGTACATTCAATGCAACCCTTTTTATTCATTTTATTCAGAAATTAAAAGCGAGCTACTTCGACACTTATCCTATTCTACTATATAAATAAAGCTCTTAGTTTATTTTTACAATTATCCTGGTTTTTACAACATAGTAATTTGATTTTGAGACAAATATGTGGAATTCTGTGCTGACATTTCCCTCTCCATGTGTTTGCCCTGTGTCAATAGCAATATAAAAAATTTACATATCTATATTTTACTTAACATATCTACATTTTCATGTGACAGAAAGTAAAGAAGATAATGTTGCCTGCACAGATAAAGATGAGAAACTCTGAAGGCTTTACTGCACAAGAGCTATTCTCAATTGAGCATGAAACACTAAGAGAAAACGCAGAGTCGTGGATGAAAAAAACTGCCGAGTCTTGCATGCTAATTTCAACTGTCATTGCTACCGGAGTGTTTGCTGCTGCAACTACTTTACCAGGCGGTACCGATGACTCTGGAAAACCACACTATTTGACTAAAACATCATTCCTGGTGTTTGCAATATCAGATGCATCTGCATTCATCTCATCTGCGACCGCGATATTGATTTTCTTGTCTATTCTTGTCTCGCGTTATGGAGAGTATGACTTCTATAAATCACTGCCTTTAAAGCTAATATGTGGATTGGTCACATTATTTATCTCCGTAACAAGCATGATGATAGCATTAAGTACTAATTTCTTCATAGTATACTACCATGGTTCGACGTGGGTTCCTGGTTTCATTTCAATATTTTCTTTCCTCCCAATACTTTTGTACATAGGTTTGCAATTTTCTTTGTTTTCAGATATCATTTACTCAACCTACTATTGGAGTACTCTATCTAAGCCTGGTAAAAATATGATTTATGTACTAGAGAAGTAGTGGATTATTATTGTAAGAAAAATGTGTATTATTATAACAGAAGTTTGA
Protein sequence

>MS.gene000075.t1

MDTTIIEGRSISKPPYFDGTNCTEWKERTKIFIQSVDYKLWLVIKNGPKIPKKLINGREVLKSEDEFNDEDMKNMEQEAKATNILYCAINPDDLKRISSCQTAKEMWEELDREVTSSDVSSTSPVSGVQRSASATYNRPNLEFLEETGNDPRKRFLSLCVPIHKHALNGNWPAAKRIIDKENKLKNAAITNGHPTLLHIAAGANHIHFVKELLNMLDDKDIALQDVNGNTAFCFAAAAGNIEIVDLLLDRNSQLPVKRGGNGNTPIHYAALQGRCKMTWHLYDKTIHCFEDADWDLLFFACIYTGIYDLALKMVRNRNALAFARDVNDEIALHLLAQNRNPLDSGCHCPEHDHFPIMTNPGMKNHIVFQLVKFLWTTILEKHYSSKEELNKILNKPSQLIFDAAEVGNFGFLSELLSVYPSLIWDVDSKNRTILHIAVLHRHASIFNLVHQIGHIKGIIVTYEDDNDRNTLLHLAAKLAPRSQLELVSGAAFQMCVELLWFEKVKKIMLPAQIKMRNSEGFTAQELFSIEHETLRENAESWMKKTAESCMLISTVIATGVFAAATTLPGGTDDSGKPHYLTKTSFLVFAISDASAFISSATAILIFLSILVSRYGEYDFYKSLPLKLICGLVTLFISVTSMMIALSTNFFIVYYHGSTWVPEV