Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene000462.t1 | P46278.1 | 98.8 | 434 | 4 | 1 | 1 | 433 | 1 | 434 | 8.10E-229 | 802.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene000462.t1 | P46278 | 98.8 | 434 | 4 | 1 | 1 | 433 | 1 | 434 | 2.0e-231 | 802.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene000462.t1 | G7L9H0 | 98.8 | 434 | 4 | 1 | 1 | 433 | 1 | 434 | 1.0e-228 | 802.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene68361 | MS.gene000462 | PPI |
MS.gene65301 | MS.gene000462 | PPI |
MS.gene64859 | MS.gene000462 | PPI |
MS.gene67555 | MS.gene000462 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene000462.t1 | MTR_8g074000 | 98.848 | 434 | 4 | 1 | 1 | 433 | 1 | 434 | 0.0 | 897 |
MS.gene000462.t1 | MTR_5g023790 | 73.086 | 431 | 103 | 5 | 6 | 431 | 6 | 428 | 0.0 | 639 |
MS.gene000462.t1 | MTR_5g023790 | 72.656 | 384 | 92 | 5 | 6 | 384 | 6 | 381 | 0.0 | 558 |
MS.gene000462.t1 | MTR_5g023790 | 70.462 | 325 | 83 | 5 | 6 | 325 | 6 | 322 | 2.94e-158 | 451 |
MS.gene000462.t1 | MTR_7g089080 | 47.101 | 276 | 139 | 2 | 158 | 427 | 182 | 456 | 3.29e-77 | 261 |
MS.gene000462.t1 | MTR_5g088980 | 43.223 | 273 | 152 | 3 | 153 | 423 | 143 | 414 | 6.78e-75 | 240 |
MS.gene000462.t1 | MTR_1g011470 | 39.209 | 278 | 155 | 6 | 155 | 422 | 142 | 415 | 2.57e-57 | 194 |
MS.gene000462.t1 | MTR_3g107970 | 39.608 | 255 | 147 | 3 | 175 | 422 | 213 | 467 | 3.30e-55 | 190 |
MS.gene000462.t1 | MTR_3g088415 | 35.789 | 285 | 171 | 6 | 148 | 423 | 216 | 497 | 2.09e-53 | 186 |
MS.gene000462.t1 | MTR_3g088405 | 38.430 | 242 | 132 | 6 | 196 | 423 | 264 | 502 | 3.93e-51 | 180 |
MS.gene000462.t1 | MTR_2g102550 | 38.057 | 247 | 146 | 3 | 175 | 414 | 167 | 413 | 1.35e-48 | 171 |
MS.gene000462.t1 | MTR_2g102520 | 40.343 | 233 | 131 | 4 | 158 | 383 | 199 | 430 | 8.67e-48 | 171 |
MS.gene000462.t1 | MTR_1g018680 | 35.178 | 253 | 155 | 4 | 175 | 418 | 91 | 343 | 9.05e-47 | 165 |
MS.gene000462.t1 | MTR_3g088415 | 39.035 | 228 | 129 | 5 | 148 | 368 | 216 | 440 | 1.28e-46 | 166 |
MS.gene000462.t1 | MTR_3g102510 | 34.263 | 251 | 158 | 3 | 175 | 418 | 74 | 324 | 6.58e-45 | 159 |
MS.gene000462.t1 | MTR_3g102520 | 33.333 | 261 | 165 | 4 | 167 | 418 | 83 | 343 | 1.92e-43 | 156 |
MS.gene000462.t1 | MTR_3g102530 | 30.383 | 339 | 208 | 8 | 98 | 418 | 8 | 336 | 1.83e-41 | 150 |
MS.gene000462.t1 | MTR_3g060770 | 39.623 | 212 | 121 | 3 | 207 | 411 | 60 | 271 | 1.50e-39 | 144 |
MS.gene000462.t1 | MTR_3g102560 | 34.746 | 236 | 140 | 4 | 176 | 402 | 65 | 295 | 2.48e-39 | 144 |
MS.gene000462.t1 | MTR_3g060410 | 37.500 | 232 | 131 | 5 | 201 | 424 | 129 | 354 | 6.41e-38 | 141 |
MS.gene000462.t1 | MTR_3g061680 | 37.089 | 213 | 127 | 3 | 206 | 411 | 49 | 261 | 5.18e-37 | 137 |
MS.gene000462.t1 | MTR_3g088415 | 40.000 | 175 | 101 | 3 | 148 | 321 | 216 | 387 | 1.42e-36 | 138 |
MS.gene000462.t1 | MTR_3g060820 | 38.318 | 214 | 123 | 5 | 206 | 411 | 49 | 261 | 7.32e-36 | 133 |
MS.gene000462.t1 | MTR_3g060400 | 37.788 | 217 | 126 | 5 | 203 | 411 | 52 | 267 | 1.53e-35 | 133 |
MS.gene000462.t1 | MTR_3g460990 | 37.788 | 217 | 126 | 5 | 203 | 411 | 52 | 267 | 1.53e-35 | 133 |
MS.gene000462.t1 | MTR_3g102540 | 32.287 | 223 | 137 | 4 | 203 | 418 | 40 | 255 | 6.42e-35 | 131 |
MS.gene000462.t1 | MTR_6g045270 | 36.607 | 224 | 122 | 7 | 208 | 424 | 75 | 285 | 1.24e-32 | 126 |
MS.gene000462.t1 | MTR_5g011900 | 33.333 | 186 | 117 | 3 | 160 | 340 | 56 | 239 | 1.66e-22 | 96.3 |
MS.gene000462.t1 | MTR_5g044040 | 46.753 | 77 | 41 | 0 | 229 | 305 | 7 | 83 | 1.52e-17 | 79.0 |
MS.gene000462.t1 | MTR_1g032850 | 32.967 | 182 | 118 | 3 | 208 | 386 | 372 | 552 | 1.23e-16 | 82.4 |
MS.gene000462.t1 | MTR_5g015670 | 28.395 | 162 | 104 | 5 | 204 | 358 | 101 | 257 | 5.03e-14 | 73.6 |
MS.gene000462.t1 | MTR_2g005960 | 33.898 | 118 | 64 | 3 | 165 | 268 | 112 | 229 | 1.29e-13 | 70.5 |
MS.gene000462.t1 | MTR_3g103080 | 31.092 | 119 | 79 | 1 | 202 | 317 | 61 | 179 | 5.87e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene000462.t1 | AT1G20610 | 55.711 | 429 | 181 | 5 | 5 | 427 | 4 | 429 | 1.24e-167 | 478 |
MS.gene000462.t1 | AT1G76310 | 56.552 | 435 | 169 | 9 | 5 | 427 | 4 | 430 | 1.22e-164 | 470 |
MS.gene000462.t1 | AT1G76310 | 53.132 | 463 | 169 | 10 | 5 | 427 | 4 | 458 | 6.28e-158 | 454 |
MS.gene000462.t1 | AT2G17620 | 59.259 | 405 | 149 | 7 | 29 | 427 | 29 | 423 | 7.16e-157 | 450 |
MS.gene000462.t1 | AT4G35620 | 57.240 | 442 | 161 | 10 | 1 | 429 | 1 | 427 | 2.85e-150 | 434 |
MS.gene000462.t1 | AT1G76310 | 55.357 | 392 | 155 | 9 | 5 | 384 | 4 | 387 | 1.93e-140 | 407 |
MS.gene000462.t1 | AT4G35620 | 57.071 | 396 | 143 | 9 | 1 | 384 | 1 | 381 | 1.34e-131 | 384 |
MS.gene000462.t1 | AT1G76310 | 54.955 | 333 | 130 | 9 | 5 | 325 | 4 | 328 | 2.19e-110 | 328 |
MS.gene000462.t1 | AT3G11520 | 40.054 | 367 | 203 | 4 | 78 | 429 | 48 | 412 | 2.23e-85 | 267 |
MS.gene000462.t1 | AT5G06150 | 37.076 | 383 | 202 | 5 | 78 | 427 | 57 | 433 | 1.75e-84 | 266 |
MS.gene000462.t1 | AT1G20590 | 68.023 | 172 | 55 | 0 | 233 | 404 | 63 | 234 | 6.37e-84 | 258 |
MS.gene000462.t1 | AT2G26760 | 45.525 | 257 | 137 | 3 | 156 | 410 | 111 | 366 | 3.46e-77 | 245 |
MS.gene000462.t1 | AT4G37490 | 44.718 | 284 | 150 | 4 | 150 | 427 | 140 | 422 | 2.47e-76 | 244 |
MS.gene000462.t1 | AT3G11520 | 39.634 | 328 | 181 | 4 | 78 | 390 | 48 | 373 | 4.43e-74 | 237 |
MS.gene000462.t1 | AT1G16330 | 43.728 | 279 | 155 | 1 | 144 | 422 | 366 | 642 | 2.66e-73 | 242 |
MS.gene000462.t1 | AT1G77390 | 39.033 | 269 | 156 | 4 | 158 | 419 | 162 | 429 | 6.08e-57 | 194 |
MS.gene000462.t1 | AT5G25380 | 41.202 | 233 | 130 | 3 | 193 | 418 | 191 | 423 | 6.28e-57 | 194 |
MS.gene000462.t1 | AT5G25380 | 41.202 | 233 | 130 | 3 | 193 | 418 | 191 | 423 | 6.28e-57 | 194 |
MS.gene000462.t1 | AT5G25380 | 41.202 | 233 | 130 | 3 | 193 | 418 | 197 | 429 | 6.84e-57 | 194 |
MS.gene000462.t1 | AT5G25380 | 41.228 | 228 | 127 | 3 | 193 | 413 | 191 | 418 | 4.98e-56 | 191 |
MS.gene000462.t1 | AT5G11300 | 43.363 | 226 | 122 | 2 | 200 | 419 | 198 | 423 | 4.54e-55 | 189 |
MS.gene000462.t1 | AT1G44110 | 37.410 | 278 | 166 | 4 | 149 | 419 | 169 | 445 | 1.08e-54 | 188 |
MS.gene000462.t1 | AT5G06150 | 36.806 | 288 | 141 | 6 | 78 | 332 | 57 | 336 | 2.44e-54 | 184 |
MS.gene000462.t1 | AT1G47210 | 37.329 | 292 | 171 | 6 | 136 | 418 | 66 | 354 | 4.21e-54 | 184 |
MS.gene000462.t1 | AT5G43080 | 37.398 | 246 | 152 | 2 | 175 | 418 | 87 | 332 | 9.28e-54 | 183 |
MS.gene000462.t1 | AT1G15570 | 38.433 | 268 | 157 | 4 | 158 | 418 | 172 | 438 | 5.46e-52 | 181 |
MS.gene000462.t1 | AT5G43080 | 36.653 | 251 | 152 | 3 | 175 | 418 | 87 | 337 | 1.37e-51 | 177 |
MS.gene000462.t1 | AT1G80370 | 35.714 | 322 | 181 | 7 | 105 | 418 | 144 | 447 | 3.37e-51 | 179 |
MS.gene000462.t1 | AT1G47220 | 35.548 | 301 | 173 | 7 | 138 | 418 | 9 | 308 | 8.24e-50 | 172 |
MS.gene000462.t1 | AT1G47230 | 36.863 | 255 | 148 | 5 | 175 | 418 | 95 | 347 | 3.27e-49 | 171 |
MS.gene000462.t1 | AT5G11300 | 48.045 | 179 | 87 | 2 | 200 | 372 | 198 | 376 | 6.33e-49 | 172 |
MS.gene000462.t1 | AT1G47230 | 36.719 | 256 | 148 | 6 | 175 | 418 | 95 | 348 | 1.57e-47 | 167 |
MS.gene000462.t1 | AT1G34460 | 32.450 | 302 | 142 | 9 | 35 | 322 | 142 | 395 | 4.26e-38 | 144 |
MS.gene000462.t1 | AT1G34460 | 32.450 | 302 | 142 | 9 | 35 | 322 | 142 | 395 | 4.26e-38 | 144 |
MS.gene000462.t1 | AT1G34460 | 32.131 | 305 | 142 | 9 | 35 | 322 | 128 | 384 | 1.36e-37 | 142 |
MS.gene000462.t1 | AT1G34460 | 32.131 | 305 | 142 | 9 | 35 | 322 | 142 | 398 | 1.72e-37 | 142 |
MS.gene000462.t1 | AT1G34460 | 32.131 | 305 | 142 | 9 | 35 | 322 | 142 | 398 | 1.72e-37 | 142 |
MS.gene000462.t1 | AT1G34460 | 32.131 | 305 | 142 | 9 | 35 | 322 | 142 | 398 | 1.72e-37 | 142 |
MS.gene000462.t1 | AT1G34460 | 32.131 | 305 | 142 | 9 | 35 | 322 | 142 | 398 | 1.72e-37 | 142 |
MS.gene000462.t1 | AT1G34460 | 32.131 | 305 | 142 | 9 | 35 | 322 | 142 | 398 | 1.79e-37 | 142 |
MS.gene000462.t1 | AT1G34460 | 32.131 | 305 | 142 | 9 | 35 | 322 | 142 | 398 | 1.85e-37 | 142 |
MS.gene000462.t1 | AT1G14750 | 31.381 | 239 | 156 | 5 | 151 | 386 | 335 | 568 | 1.20e-20 | 94.7 |
MS.gene000462.t1 | AT1G14750 | 31.381 | 239 | 156 | 5 | 151 | 386 | 335 | 568 | 1.23e-20 | 95.1 |
MS.gene000462.t1 | AT1G14750 | 31.381 | 239 | 156 | 5 | 151 | 386 | 167 | 400 | 1.66e-20 | 93.6 |
MS.gene000462.t1 | AT1G14750 | 31.381 | 239 | 155 | 6 | 151 | 386 | 167 | 399 | 2.33e-19 | 90.1 |
MS.gene000462.t1 | AT1G47210 | 37.692 | 130 | 75 | 4 | 136 | 262 | 66 | 192 | 2.50e-17 | 80.5 |
Find 93 sgRNAs with CRISPR-Local
Find 195 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTTTCCCGGCTCCGGCTTTC+TGG | 0.084802 | 8.2:+30705641 | None:intergenic |
CCATTGAATTCGAATGAGTT+TGG | 0.261009 | 8.2:-30707829 | MS.gene000462:CDS |
TATAGAGGGAGAGATGATTT+TGG | 0.262359 | 8.2:-30707596 | MS.gene000462:CDS |
GGGCAGAACAGAAGAGCTTT+AGG | 0.305806 | 8.2:-30708983 | MS.gene000462:CDS |
TGAAAAGAAACAGGCTGATC+TGG | 0.314414 | 8.2:-30708741 | MS.gene000462:CDS |
ATAGGCTCTGGTTGGTCTTC+TGG | 0.316208 | 8.2:+30707772 | None:intergenic |
TAATCTCATAGACAGATTCT+TGG | 0.324335 | 8.2:-30706607 | MS.gene000462:CDS |
TGTAAGCTCTGTCAGCTATA+TGG | 0.334048 | 8.2:+30706478 | None:intergenic |
TGGTCTTGTTGCCATGCTTT+TGG | 0.336057 | 8.2:-30706547 | MS.gene000462:CDS |
GGTTGAGATGGAGGATATAG+AGG | 0.350208 | 8.2:-30707611 | MS.gene000462:CDS |
AGGTTTGCTGCACAAATTGC+TGG | 0.354792 | 8.2:-30707987 | MS.gene000462:CDS |
CCAAACTCATTCGAATTCAA+TGG | 0.363201 | 8.2:+30707829 | None:intergenic |
AGTTTCTGTGCCTGTCGTTT+CGG | 0.378515 | 8.2:-30706508 | MS.gene000462:CDS |
TTTCTTGGTTGAGCTATCTC+TGG | 0.388305 | 8.2:-30706032 | MS.gene000462:CDS |
ACAGGAGTGCATAGGAAGTA+TGG | 0.389149 | 8.2:-30705616 | MS.gene000462:CDS |
TCCTGTCAGTTTCCCGGCTC+CGG | 0.389685 | 8.2:+30705633 | None:intergenic |
ATTACCTTCCTGCAGTATCT+TGG | 0.392563 | 8.2:-30706835 | MS.gene000462:intron |
ATGCACTCCTGTCAGTTTCC+CGG | 0.396721 | 8.2:+30705627 | None:intergenic |
CCAACCAGAGCCTATGACTT+TGG | 0.406687 | 8.2:-30707764 | MS.gene000462:CDS |
TGAGATTTGTGAAAAGAAAC+AGG | 0.423211 | 8.2:-30708750 | MS.gene000462:CDS |
CATGGTGGTGGAAGAATTGT+TGG | 0.432361 | 8.2:-30709004 | MS.gene000462:CDS |
GCTGAAGTTTCCACCATCCT+TGG | 0.437665 | 8.2:-30705996 | MS.gene000462:CDS |
TTCCACCAGAAAGCCGGAGC+CGG | 0.440451 | 8.2:-30705646 | MS.gene000462:CDS |
TTAGGAAGAGGTTGAGATGG+AGG | 0.445763 | 8.2:-30707620 | MS.gene000462:intron |
GCTGGCTCTCTTCCTATGGC+TGG | 0.454389 | 8.2:+30705530 | None:intergenic |
AAGGAAAGACATTCTCGAAA+TGG | 0.454782 | 8.2:-30706454 | MS.gene000462:intron |
TCCACCAGAAAGCCGGAGCC+GGG | 0.455107 | 8.2:-30705645 | MS.gene000462:CDS |
TCAGTATGCTCCAAAGTCAT+AGG | 0.464004 | 8.2:+30707754 | None:intergenic |
CTGTGTTTCACCAACCTACA+TGG | 0.464678 | 8.2:-30706812 | MS.gene000462:CDS |
CTTGGTTGAGCTATCTCTGG+TGG | 0.487275 | 8.2:-30706029 | MS.gene000462:CDS |
TGCTCCAAAGTCATAGGCTC+TGG | 0.489422 | 8.2:+30707760 | None:intergenic |
GTTATGCCAAGAAAATTTCA+AGG | 0.494043 | 8.2:-30709186 | MS.gene000462:intron |
CATCATCCTCACCTTGTGAT+GGG | 0.499765 | 8.2:+30708710 | None:intergenic |
TCCCGGCTCCGGCTTTCTGG+TGG | 0.502002 | 8.2:+30705644 | None:intergenic |
AAACAATTCTCTTGCTGTTG+TGG | 0.505256 | 8.2:-30707554 | MS.gene000462:CDS |
TTGACCTCAATGAGAGGATG+AGG | 0.506853 | 8.2:-30706780 | MS.gene000462:CDS |
TAAAATAATACCATCTCAAG+TGG | 0.513574 | 8.2:+30707715 | None:intergenic |
GCCGGAGCCGGGAAACTGAC+AGG | 0.514290 | 8.2:-30705634 | MS.gene000462:CDS |
TATTTCGAAACAGCTTGAGC+TGG | 0.528657 | 8.2:-30706062 | MS.gene000462:intron |
GCATCATCCTCACCTTGTGA+TGG | 0.528830 | 8.2:+30708709 | None:intergenic |
TTCGAAACAGCTTGAGCTGG+TGG | 0.531853 | 8.2:-30706059 | MS.gene000462:intron |
AATCAAGTGGGTCATGGTGG+TGG | 0.531920 | 8.2:-30709016 | MS.gene000462:CDS |
GTTGAGATGGAGGATATAGA+GGG | 0.532314 | 8.2:-30707610 | MS.gene000462:CDS |
TGACTTGAGTTCATCATCAA+TGG | 0.538934 | 8.2:+30707795 | None:intergenic |
GAAAAGAAACAGGCTGATCT+GGG | 0.542053 | 8.2:-30708740 | MS.gene000462:CDS |
CAATCTTTCTGTAGTAAGCA+TGG | 0.544092 | 8.2:+30707515 | None:intergenic |
CTGTCAGTGGTTTCAAACAC+TGG | 0.547379 | 8.2:-30705940 | MS.gene000462:CDS |
GTTGGATTCCACCAGAAAGC+CGG | 0.549405 | 8.2:-30705652 | MS.gene000462:CDS |
CTCATGAAAACATAAGCAGT+TGG | 0.552049 | 8.2:+30706201 | None:intergenic |
TTCTCCAGAAGAAAACATGC+TGG | 0.555497 | 8.2:+30705559 | None:intergenic |
ACCCTTGTGTTGTACACAAG+AGG | 0.563360 | 8.2:-30708925 | MS.gene000462:CDS |
AGAAAGAAACTTCAGCTGGT+TGG | 0.570350 | 8.2:-30706567 | MS.gene000462:CDS |
TAGAGAGTGCTCTATGCTGA+TGG | 0.570792 | 8.2:-30705674 | MS.gene000462:CDS |
TCAAGTGGATCACTATGCAT+TGG | 0.570854 | 8.2:+30707730 | None:intergenic |
CCAAAGTCATAGGCTCTGGT+TGG | 0.576471 | 8.2:+30707764 | None:intergenic |
ACTAGTTGACTGGCTGATTG+AGG | 0.576580 | 8.2:-30706752 | MS.gene000462:intron |
AGTTGTTCATCCATGTAGGT+TGG | 0.578213 | 8.2:+30706802 | None:intergenic |
GAGTGCTCTATGCTGATGGT+TGG | 0.583871 | 8.2:-30705670 | MS.gene000462:CDS |
TTTCATGAGAAGGTTTCTGA+AGG | 0.585150 | 8.2:-30706187 | MS.gene000462:CDS |
ACCCTCTTGTGTACAACACA+AGG | 0.585319 | 8.2:+30708923 | None:intergenic |
GGAATGAATCAAGTGGGTCA+TGG | 0.585969 | 8.2:-30709022 | MS.gene000462:CDS |
TGCTTACTACAGAAAGATTG+AGG | 0.587812 | 8.2:-30707512 | MS.gene000462:intron |
GCATAGTGATCCACTTGAGA+TGG | 0.589041 | 8.2:-30707725 | MS.gene000462:intron |
GAGTTCATCATCAATGGCGA+TGG | 0.589270 | 8.2:+30707801 | None:intergenic |
TTGTGTACAACACAAGGGTA+AGG | 0.590139 | 8.2:+30708929 | None:intergenic |
GCAGCAGCAGCAACCAAGGA+TGG | 0.592621 | 8.2:+30705983 | None:intergenic |
AAGAGAAACTACCTCAGCAT+AGG | 0.594491 | 8.2:+30707953 | None:intergenic |
GACTGCAGCAGCAGCAACCA+AGG | 0.597418 | 8.2:+30705979 | None:intergenic |
ATGGTGGTGGAAGAATTGTT+GGG | 0.599493 | 8.2:-30709003 | MS.gene000462:CDS |
AGTCAGAAAGAAACTTCAGC+TGG | 0.600525 | 8.2:-30706571 | MS.gene000462:CDS |
TGAGGGCTATACTAGTTGAC+TGG | 0.601446 | 8.2:-30706762 | MS.gene000462:CDS |
CAGAACAGAAGAGCTTTAGG+AGG | 0.603464 | 8.2:-30708980 | MS.gene000462:CDS |
GGAAACTGACAGGAGTGCAT+AGG | 0.605234 | 8.2:-30705624 | MS.gene000462:CDS |
TGGATCAGATCCGAAACGAC+AGG | 0.607714 | 8.2:+30706498 | None:intergenic |
GCAGCAGCAACCAAGGATGG+TGG | 0.610277 | 8.2:+30705986 | None:intergenic |
CCCTTGTGTTGTACACAAGA+GGG | 0.611245 | 8.2:-30708924 | MS.gene000462:CDS |
TAGCCCTCATCCTCTCATTG+AGG | 0.620243 | 8.2:+30706776 | None:intergenic |
TTTAGGAGGAATGAATCAAG+TGG | 0.621092 | 8.2:-30709029 | MS.gene000462:intron |
GTCAAGTTGTTCATCCATGT+AGG | 0.623557 | 8.2:+30706798 | None:intergenic |
ATACTTGCATGCCAAAAGCA+TGG | 0.626148 | 8.2:+30706536 | None:intergenic |
GGAGAACAAGAACCAGCCAT+AGG | 0.628255 | 8.2:-30705542 | None:intergenic |
AACAACTTGACCTCAATGAG+AGG | 0.630153 | 8.2:-30706786 | MS.gene000462:CDS |
ACAGCTCAATGCACTGTCAG+TGG | 0.642330 | 8.2:-30705953 | MS.gene000462:CDS |
TTAGGAGGAATGAATCAAGT+GGG | 0.649963 | 8.2:-30709028 | MS.gene000462:intron |
TGACCTCAATGAGAGGATGA+GGG | 0.651271 | 8.2:-30706779 | MS.gene000462:CDS |
AGAACAGAAGAGCTTTAGGA+GGG | 0.662736 | 8.2:-30708979 | MS.gene000462:CDS |
GAAACAGTGTCTCTTGCATG+AGG | 0.663445 | 8.2:+30706637 | None:intergenic |
CTCACAGCAATCCTATGCTG+AGG | 0.663582 | 8.2:-30707964 | MS.gene000462:intron |
ATGAATCAAGTGGGTCATGG+TGG | 0.688882 | 8.2:-30709019 | MS.gene000462:CDS |
TAGCTGACAGAGCTTACACA+AGG | 0.713688 | 8.2:-30706473 | MS.gene000462:CDS |
TGGGACATAGACCCATCACA+AGG | 0.714635 | 8.2:-30708721 | MS.gene000462:intron |
CCCTCTTGTGTACAACACAA+GGG | 0.715744 | 8.2:+30708924 | None:intergenic |
ACTGGAACAAGACATGCGAG+TGG | 0.734063 | 8.2:-30705922 | MS.gene000462:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAAATTTAAAGATTTGAATT+GGG | - | chr8.2:30705685-30705704 | MS.gene000462:intron | 10.0% |
!! | TTAAATTTAAAGATTTGAAT+TGG | - | chr8.2:30705684-30705703 | MS.gene000462:intron | 10.0% |
!!! | AATTTTGAAATTTAATGTAA+TGG | - | chr8.2:30706135-30706154 | MS.gene000462:intron | 10.0% |
!!! | TTTTTTTATGATTATTAGTT+TGG | - | chr8.2:30705935-30705954 | MS.gene000462:CDS | 10.0% |
!! | ATATTGATGTATTGTTAATT+AGG | - | chr8.2:30706755-30706774 | MS.gene000462:CDS | 15.0% |
!! | TATAATTTCATTCAACAATA+AGG | + | chr8.2:30706313-30706332 | None:intergenic | 15.0% |
!! | TGTTATCAAAAATTTAATGT+TGG | - | chr8.2:30706421-30706440 | MS.gene000462:intron | 15.0% |
!!! | GACAAATTTTGATATTATTA+TGG | - | chr8.2:30707553-30707572 | MS.gene000462:CDS | 15.0% |
!!! | GATTCAAAATTAGTTTTTTA+TGG | - | chr8.2:30705659-30705678 | MS.gene000462:CDS | 15.0% |
!!! | TTGAATCTTTTTTGAATTTT+AGG | - | chr8.2:30705719-30705738 | MS.gene000462:intron | 15.0% |
!!! | TTTAAAATTCCAATATAATC+CGG | + | chr8.2:30707281-30707300 | None:intergenic | 15.0% |
!! | ATTAGTTACATTGAATTGAA+CGG | + | chr8.2:30708382-30708401 | None:intergenic | 20.0% |
!! | TATGATTAATGAAACTCATT+TGG | + | chr8.2:30708643-30708662 | None:intergenic | 20.0% |
!! | TCATTTCATTACATAAATCA+TGG | + | chr8.2:30706718-30706737 | None:intergenic | 20.0% |
!! | TGAATTGTCAAATGAAATTA+TGG | - | chr8.2:30706630-30706649 | MS.gene000462:CDS | 20.0% |
!! | TGTGAAAAATTATTACAAGA+TGG | + | chr8.2:30708349-30708368 | None:intergenic | 20.0% |
!! | TTAAACTAAATTCTGAATCA+TGG | - | chr8.2:30706882-30706901 | MS.gene000462:intron | 20.0% |
!!! | AAATTTTGATTGGAACATAA+AGG | - | chr8.2:30705612-30705631 | MS.gene000462:CDS | 20.0% |
!!! | AATCTTTTTTGAATTTTAGG+AGG | - | chr8.2:30705722-30705741 | MS.gene000462:intron | 20.0% |
!!! | AATGGAATTATTATTAGCTT+AGG | - | chr8.2:30707632-30707651 | MS.gene000462:intron | 20.0% |
!!! | TACATTGTTGAAATTTTGAT+TGG | - | chr8.2:30705602-30705621 | MS.gene000462:CDS | 20.0% |
!!! | TGGAATTTTAAACTTCATAT+TGG | - | chr8.2:30707289-30707308 | MS.gene000462:intron | 20.0% |
!!! | TTATTAGTTTGGTTTCTTTA+AGG | - | chr8.2:30705946-30705965 | MS.gene000462:CDS | 20.0% |
!!! | TTCTTTGTCATTTAAATAAC+CGG | - | chr8.2:30708070-30708089 | MS.gene000462:intron | 20.0% |
! | AAAAAAGATAATCACATCAG+TGG | + | chr8.2:30709064-30709083 | None:intergenic | 25.0% |
! | AATATCTAACACTGTTATGT+TGG | - | chr8.2:30707770-30707789 | MS.gene000462:CDS | 25.0% |
! | AGAAATCAATAATTTGATGC+AGG | + | chr8.2:30708054-30708073 | None:intergenic | 25.0% |
! | ATTAGTCATCAAAGTAAGAT+TGG | + | chr8.2:30707907-30707926 | None:intergenic | 25.0% |
! | ATTAGTTACACTGAATTGAA+CGG | + | chr8.2:30708474-30708493 | None:intergenic | 25.0% |
! | CATTTGACAATTAAGTACTA+TGG | + | chr8.2:30706450-30706469 | None:intergenic | 25.0% |
! | GAGATATAAGGAACAATAAA+TGG | + | chr8.2:30707803-30707822 | None:intergenic | 25.0% |
! | GTAATCAAAATTGAATGTCA+TGG | - | chr8.2:30706280-30706299 | MS.gene000462:intron | 25.0% |
! | TAAAATAATACCATCTCAAG+TGG | + | chr8.2:30707053-30707072 | None:intergenic | 25.0% |
! | TCAATTTCAAACATGTAGAT+TGG | - | chr8.2:30706196-30706215 | MS.gene000462:CDS | 25.0% |
! | TCAATTTCAAACTTGTAGAT+TGG | - | chr8.2:30706484-30706503 | MS.gene000462:CDS | 25.0% |
! | TGTTGTCAAGTGAAATTATA+GGG | - | chr8.2:30706170-30706189 | MS.gene000462:CDS | 25.0% |
! | TGTTTCGAAATAAAGAGTAA+AGG | + | chr8.2:30708695-30708714 | None:intergenic | 25.0% |
! | TTGATGTATTGTTAATTAGG+AGG | - | chr8.2:30706758-30706777 | MS.gene000462:CDS | 25.0% |
! | TTGTTGTCAAGTGAAATTAT+AGG | - | chr8.2:30706169-30706188 | MS.gene000462:CDS | 25.0% |
! | TTTCATTACATAAATCATGG+TGG | + | chr8.2:30706715-30706734 | None:intergenic | 25.0% |
!! | AATGTACCTTGAAATTTTCT+TGG | + | chr8.2:30705588-30705607 | None:intergenic | 25.0% |
!! | GAAGTTGATTATCTTTACAA+TGG | - | chr8.2:30707614-30707633 | MS.gene000462:CDS | 25.0% |
!! | TAGTGTTTTCAATTGTAGAT+TGG | - | chr8.2:30706331-30706350 | MS.gene000462:intron | 25.0% |
!!! | GTTTTGTTTTTGTTGTTGTT+GGG | - | chr8.2:30706088-30706107 | MS.gene000462:intron | 25.0% |
!!! | TGTTTTCTTTTGTTGTTGTT+AGG | - | chr8.2:30706393-30706412 | MS.gene000462:intron | 25.0% |
!!! | TGTTTTGTTTTTGTTGTTGT+TGG | - | chr8.2:30706087-30706106 | MS.gene000462:intron | 25.0% |
!!! | TTAAGGTTAATTGTTTTGTC+TGG | - | chr8.2:30705963-30705982 | MS.gene000462:CDS | 25.0% |
AAATTTAATGCCATAGACCA+TGG | - | chr8.2:30706604-30706623 | MS.gene000462:CDS | 30.0% | |
AACTTACAAGTTGTGAAACT+TGG | - | chr8.2:30707514-30707533 | MS.gene000462:CDS | 30.0% | |
ATACTATAAGAATGCCCTAA+TGG | + | chr8.2:30708930-30708949 | None:intergenic | 30.0% | |
ATATCCAATGATTACGAGAA+AGG | - | chr8.2:30707836-30707855 | MS.gene000462:CDS | 30.0% | |
CAAAATTGAATGTCATGGAA+TGG | - | chr8.2:30706285-30706304 | MS.gene000462:intron | 30.0% | |
GCAGTAAAGTATGAGATATA+AGG | + | chr8.2:30707815-30707834 | None:intergenic | 30.0% | |
GGGAAACATTTGATCAAAAT+TGG | - | chr8.2:30706108-30706127 | MS.gene000462:intron | 30.0% | |
GTTATGCCAAGAAAATTTCA+AGG | - | chr8.2:30705579-30705598 | MS.gene000462:CDS | 30.0% | |
TAATCTCATAGACAGATTCT+TGG | - | chr8.2:30708158-30708177 | MS.gene000462:intron | 30.0% | |
TAATGGCTAATTGAAAAGAG+AGG | + | chr8.2:30708913-30708932 | None:intergenic | 30.0% | |
TCACAAAACTAACTTCTATC+AGG | + | chr8.2:30707317-30707336 | None:intergenic | 30.0% | |
TCTTCCTAAAAAGTAGTACA+AGG | + | chr8.2:30707134-30707153 | None:intergenic | 30.0% | |
TGAGATTTGTGAAAAGAAAC+AGG | - | chr8.2:30706015-30706034 | MS.gene000462:CDS | 30.0% | |
TGATTGGAACATAAAGGAAA+AGG | - | chr8.2:30705618-30705637 | MS.gene000462:CDS | 30.0% | |
TTTGTGAATTGAGCTTAGTT+TGG | - | chr8.2:30707330-30707349 | MS.gene000462:intron | 30.0% | |
! | ATCAATCAGAATTTTGTGCA+TGG | - | chr8.2:30705809-30705828 | MS.gene000462:intron | 30.0% |
! | CTCTTTTCAATTAGCCATTA+GGG | - | chr8.2:30708913-30708932 | MS.gene000462:intron | 30.0% |
! | TCTCTTTTCAATTAGCCATT+AGG | - | chr8.2:30708912-30708931 | MS.gene000462:intron | 30.0% |
!!! | CATTAGTCTGCTTTTTTGTA+TGG | - | chr8.2:30707366-30707385 | MS.gene000462:intron | 30.0% |
!!! | GTTGATTGATGCTGATTTTT+GGG | - | chr8.2:30706672-30706691 | MS.gene000462:intron | 30.0% |
!!! | TGTTGATTGATGCTGATTTT+TGG | - | chr8.2:30706671-30706690 | MS.gene000462:intron | 30.0% |
!!! | TTGATTGATGCTGATTTTTG+GGG | - | chr8.2:30706673-30706692 | MS.gene000462:intron | 30.0% |
!!! | TTGTACTACTTTTTAGGAAG+AGG | - | chr8.2:30707133-30707152 | MS.gene000462:intron | 30.0% |
AAGGAAAGACATTCTCGAAA+TGG | - | chr8.2:30708311-30708330 | MS.gene000462:intron | 35.0% | |
AATTCAATCACTGTCAAGTG+TGG | + | chr8.2:30707456-30707475 | None:intergenic | 35.0% | |
CAATCTTTCTGTAGTAAGCA+TGG | + | chr8.2:30707253-30707272 | None:intergenic | 35.0% | |
CACTTGACAACAAAGTAACA+TGG | + | chr8.2:30706162-30706181 | None:intergenic | 35.0% | |
CATTTGACAATTCAGTACCA+TGG | + | chr8.2:30706624-30706643 | None:intergenic | 35.0% | |
CCAAACTCATTCGAATTCAA+TGG | + | chr8.2:30706939-30706958 | None:intergenic | 35.0% | |
CCATTGAATTCGAATGAGTT+TGG | - | chr8.2:30706936-30706955 | MS.gene000462:intron | 35.0% | |
CCTGATATCGATATTTAAGC+CGG | + | chr8.2:30708092-30708111 | None:intergenic | 35.0% | |
CTCATGAAAACATAAGCAGT+TGG | + | chr8.2:30708567-30708586 | None:intergenic | 35.0% | |
GACGACATATATTGCAGATT+TGG | + | chr8.2:30707693-30707712 | None:intergenic | 35.0% | |
GGGCATTCTTATAGTATAAG+TGG | - | chr8.2:30708933-30708952 | MS.gene000462:CDS | 35.0% | |
TAAACACTATCTGTCTAGTG+TGG | + | chr8.2:30707745-30707764 | None:intergenic | 35.0% | |
TGACTTGAGTTCATCATCAA+TGG | + | chr8.2:30706973-30706992 | None:intergenic | 35.0% | |
TGCTTACTACAGAAAGATTG+AGG | - | chr8.2:30707253-30707272 | MS.gene000462:intron | 35.0% | |
TTAAAGCTAGGGTCTACATA+TGG | + | chr8.2:30709037-30709056 | None:intergenic | 35.0% | |
TTAGGAGGAATGAATCAAGT+GGG | - | chr8.2:30705737-30705756 | MS.gene000462:intron | 35.0% | |
TTCACCTTTCTCGTAATCAT+TGG | + | chr8.2:30707843-30707862 | None:intergenic | 35.0% | |
TTGTAGATTGGTGCAGATTA+AGG | - | chr8.2:30706343-30706362 | MS.gene000462:intron | 35.0% | |
TTTAGGAGGAATGAATCAAG+TGG | - | chr8.2:30705736-30705755 | MS.gene000462:intron | 35.0% | |
TTTCATGAGAAGGTTTCTGA+AGG | - | chr8.2:30708578-30708597 | MS.gene000462:intron | 35.0% | |
! | CTGCTTATGTTTTCATGAGA+AGG | - | chr8.2:30708568-30708587 | MS.gene000462:intron | 35.0% |
! | TATAGAGGGAGAGATGATTT+TGG | - | chr8.2:30707169-30707188 | MS.gene000462:intron | 35.0% |
! | TTGTGCTTTTGCATGTAAAG+TGG | - | chr8.2:30707421-30707440 | MS.gene000462:intron | 35.0% |
!! | AAACAATTCTCTTGCTGTTG+TGG | - | chr8.2:30707211-30707230 | MS.gene000462:intron | 35.0% |
!! | ATTGAGGTACCGGATTATAT+TGG | - | chr8.2:30707269-30707288 | MS.gene000462:intron | 35.0% |
!! | TTTTTAGGAAGAGGTTGAGA+TGG | - | chr8.2:30707142-30707161 | MS.gene000462:intron | 35.0% |
AACAACTTGACCTCAATGAG+AGG | - | chr8.2:30707979-30707998 | MS.gene000462:CDS | 40.0% | |
AAGAGAAACTACCTCAGCAT+AGG | + | chr8.2:30706815-30706834 | None:intergenic | 40.0% | |
AGAAAGAAACTTCAGCTGGT+TGG | - | chr8.2:30708198-30708217 | MS.gene000462:intron | 40.0% | |
AGTCAGAAAGAAACTTCAGC+TGG | - | chr8.2:30708194-30708213 | MS.gene000462:intron | 40.0% | |
AGTTGTTCATCCATGTAGGT+TGG | + | chr8.2:30707966-30707985 | None:intergenic | 40.0% | |
ATACTTGCATGCCAAAAGCA+TGG | + | chr8.2:30708232-30708251 | None:intergenic | 40.0% | |
ATCAGTGGCATGTTAAAGCT+AGG | + | chr8.2:30709049-30709068 | None:intergenic | 40.0% | |
ATGAACACGAAGTCGTAAGT+TGG | - | chr8.2:30708997-30709016 | MS.gene000462:CDS | 40.0% | |
ATTACCTTCCTGCAGTATCT+TGG | - | chr8.2:30707930-30707949 | MS.gene000462:intron | 40.0% | |
CAATTCAGTACCATGGTCTA+TGG | + | chr8.2:30706617-30706636 | None:intergenic | 40.0% | |
CCGGCTTAAATATCGATATC+AGG | - | chr8.2:30708089-30708108 | MS.gene000462:intron | 40.0% | |
CTACAGAAAGATTGAGGTAC+CGG | - | chr8.2:30707259-30707278 | MS.gene000462:intron | 40.0% | |
GAAAAGAAACAGGCTGATCT+GGG | - | chr8.2:30706025-30706044 | MS.gene000462:CDS | 40.0% | |
GATTTCTTTCCAAACACCGT+AGG | - | chr8.2:30708500-30708519 | MS.gene000462:intron | 40.0% | |
GTTGAGATGGAGGATATAGA+GGG | - | chr8.2:30707155-30707174 | MS.gene000462:intron | 40.0% | |
TATTTCGAAACAGCTTGAGC+TGG | - | chr8.2:30708703-30708722 | MS.gene000462:intron | 40.0% | |
TCAAACATGTAGATTGGTGC+TGG | - | chr8.2:30706202-30706221 | MS.gene000462:CDS | 40.0% | |
TCAAGTGGATCACTATGCAT+TGG | + | chr8.2:30707038-30707057 | None:intergenic | 40.0% | |
TCAGTATGCTCCAAAGTCAT+AGG | + | chr8.2:30707014-30707033 | None:intergenic | 40.0% | |
TCAGTGGCATGTTAAAGCTA+GGG | + | chr8.2:30709048-30709067 | None:intergenic | 40.0% | |
TGAAAAGAAACAGGCTGATC+TGG | - | chr8.2:30706024-30706043 | MS.gene000462:CDS | 40.0% | |
TGTAAGCTCTGTCAGCTATA+TGG | + | chr8.2:30708290-30708309 | None:intergenic | 40.0% | |
TTCTCCAGAAGAAAACATGC+TGG | + | chr8.2:30709209-30709228 | None:intergenic | 40.0% | |
TTGTGTACAACACAAGGGTA+AGG | + | chr8.2:30705839-30705858 | None:intergenic | 40.0% | |
TTTCTTGGTTGAGCTATCTC+TGG | - | chr8.2:30708733-30708752 | MS.gene000462:CDS | 40.0% | |
! | GTCAAGTTGTTCATCCATGT+AGG | + | chr8.2:30707970-30707989 | None:intergenic | 40.0% |
! | TGAACCAGCATGTTTTCTTC+TGG | - | chr8.2:30709202-30709221 | MS.gene000462:CDS | 40.0% |
! | TTTTCTTGGCATAACTGCGT+TGG | + | chr8.2:30705574-30705593 | None:intergenic | 40.0% |
!! | AGAACAGAAGAGCTTTAGGA+GGG | - | chr8.2:30705786-30705805 | MS.gene000462:intron | 40.0% |
!! | ATGGTGGTGGAAGAATTGTT+GGG | - | chr8.2:30705762-30705781 | MS.gene000462:intron | 40.0% |
!! | TTGTAGATTGGTGCTGATTG+AGG | - | chr8.2:30706496-30706515 | MS.gene000462:CDS | 40.0% |
!!! | GTCGCCTTGTACTACTTTTT+AGG | - | chr8.2:30707127-30707146 | MS.gene000462:intron | 40.0% |
AAACACAGCCAAGATACTGC+AGG | + | chr8.2:30707941-30707960 | None:intergenic | 45.0% | |
ACCCTCTTGTGTACAACACA+AGG | + | chr8.2:30705845-30705864 | None:intergenic | 45.0% | |
ACCCTTGTGTTGTACACAAG+AGG | - | chr8.2:30705840-30705859 | MS.gene000462:intron | 45.0% | |
ATGAATCAAGTGGGTCATGG+TGG | - | chr8.2:30705746-30705765 | MS.gene000462:intron | 45.0% | |
CATCATCCTCACCTTGTGAT+GGG | + | chr8.2:30706058-30706077 | None:intergenic | 45.0% | |
CCCTCTTGTGTACAACACAA+GGG | + | chr8.2:30705844-30705863 | None:intergenic | 45.0% | |
CCCTTGTGTTGTACACAAGA+GGG | - | chr8.2:30705841-30705860 | MS.gene000462:intron | 45.0% | |
CTGTCAGTGGTTTCAAACAC+TGG | - | chr8.2:30708825-30708844 | MS.gene000462:intron | 45.0% | |
CTGTGTTTCACCAACCTACA+TGG | - | chr8.2:30707953-30707972 | MS.gene000462:intron | 45.0% | |
GAAACAGTGTCTCTTGCATG+AGG | + | chr8.2:30708131-30708150 | None:intergenic | 45.0% | |
GAACCAACTTGCATGGATCA+GGG | + | chr8.2:30707668-30707687 | None:intergenic | 45.0% | |
GAGTTCATCATCAATGGCGA+TGG | + | chr8.2:30706967-30706986 | None:intergenic | 45.0% | |
GCATAGTGATCCACTTGAGA+TGG | - | chr8.2:30707040-30707059 | MS.gene000462:intron | 45.0% | |
GGAATGAATCAAGTGGGTCA+TGG | - | chr8.2:30705743-30705762 | MS.gene000462:intron | 45.0% | |
GGTTGAGATGGAGGATATAG+AGG | - | chr8.2:30707154-30707173 | MS.gene000462:intron | 45.0% | |
TAGCTGACAGAGCTTACACA+AGG | - | chr8.2:30708292-30708311 | MS.gene000462:intron | 45.0% | |
TGAACCAACTTGCATGGATC+AGG | + | chr8.2:30707669-30707688 | None:intergenic | 45.0% | |
TGACCTCAATGAGAGGATGA+GGG | - | chr8.2:30707986-30708005 | MS.gene000462:CDS | 45.0% | |
TGAGGGCTATACTAGTTGAC+TGG | - | chr8.2:30708003-30708022 | MS.gene000462:intron | 45.0% | |
TTAGGAAGAGGTTGAGATGG+AGG | - | chr8.2:30707145-30707164 | MS.gene000462:intron | 45.0% | |
TTGACCTCAATGAGAGGATG+AGG | - | chr8.2:30707985-30708004 | MS.gene000462:CDS | 45.0% | |
TTTGGCTGAACCAACTTGCA+TGG | + | chr8.2:30707675-30707694 | None:intergenic | 45.0% | |
! | ACAGGAGTGCATAGGAAGTA+TGG | - | chr8.2:30709149-30709168 | MS.gene000462:intron | 45.0% |
! | ACTAGTTGACTGGCTGATTG+AGG | - | chr8.2:30708013-30708032 | MS.gene000462:intron | 45.0% |
! | AGTTTCTGTGCCTGTCGTTT+CGG | - | chr8.2:30708257-30708276 | MS.gene000462:intron | 45.0% |
! | GCTTTTGGCATGCAAGTATG+AGG | - | chr8.2:30708233-30708252 | MS.gene000462:intron | 45.0% |
!! | AGGTTTGCTGCACAAATTGC+TGG | - | chr8.2:30706778-30706797 | MS.gene000462:CDS | 45.0% |
!! | ATGTAGATTGGTGCTGGTTG+AGG | - | chr8.2:30706208-30706227 | MS.gene000462:CDS | 45.0% |
!! | CAGAACAGAAGAGCTTTAGG+AGG | - | chr8.2:30705785-30705804 | MS.gene000462:intron | 45.0% |
!! | CATGGTGGTGGAAGAATTGT+TGG | - | chr8.2:30705761-30705780 | MS.gene000462:intron | 45.0% |
!! | TAGAGAGTGCTCTATGCTGA+TGG | - | chr8.2:30709091-30709110 | MS.gene000462:intron | 45.0% |
!! | TTGAGCATCGACTTCTCCTA+CGG | + | chr8.2:30708519-30708538 | None:intergenic | 45.0% |
!!! | TGAGCTGGTGGCTTTTTTCT+TGG | - | chr8.2:30708718-30708737 | MS.gene000462:intron | 45.0% |
!!! | TGGTCTTGTTGCCATGCTTT+TGG | - | chr8.2:30708218-30708237 | MS.gene000462:intron | 45.0% |
AATCAAGTGGGTCATGGTGG+TGG | - | chr8.2:30705749-30705768 | MS.gene000462:intron | 50.0% | |
ACAGCCAAGATACTGCAGGA+AGG | + | chr8.2:30707937-30707956 | None:intergenic | 50.0% | |
ACAGCTCAATGCACTGTCAG+TGG | - | chr8.2:30708812-30708831 | MS.gene000462:intron | 50.0% | |
ACTGGAACAAGACATGCGAG+TGG | - | chr8.2:30708843-30708862 | MS.gene000462:intron | 50.0% | |
ATGCACTCCTGTCAGTTTCC+CGG | + | chr8.2:30709141-30709160 | None:intergenic | 50.0% | |
CAACCCTGATCCATGCAAGT+TGG | - | chr8.2:30707662-30707681 | MS.gene000462:intron | 50.0% | |
CATAGACCCATCACAAGGTG+AGG | - | chr8.2:30706049-30706068 | MS.gene000462:CDS | 50.0% | |
CCAACCAGAGCCTATGACTT+TGG | - | chr8.2:30707001-30707020 | MS.gene000462:intron | 50.0% | |
CTCACAGCAATCCTATGCTG+AGG | - | chr8.2:30706801-30706820 | MS.gene000462:CDS | 50.0% | |
CTTGGTTGAGCTATCTCTGG+TGG | - | chr8.2:30708736-30708755 | MS.gene000462:CDS | 50.0% | |
GAGTGCTCTATGCTGATGGT+TGG | - | chr8.2:30709095-30709114 | MS.gene000462:intron | 50.0% | |
GCATCATCCTCACCTTGTGA+TGG | + | chr8.2:30706059-30706078 | None:intergenic | 50.0% | |
GCTGAAGTTTCCACCATCCT+TGG | - | chr8.2:30708769-30708788 | MS.gene000462:intron | 50.0% | |
GGGCAGAACAGAAGAGCTTT+AGG | - | chr8.2:30705782-30705801 | MS.gene000462:intron | 50.0% | |
GTTGGATTCCACCAGAAAGC+CGG | - | chr8.2:30709113-30709132 | MS.gene000462:intron | 50.0% | |
TAGCCCTCATCCTCTCATTG+AGG | + | chr8.2:30707992-30708011 | None:intergenic | 50.0% | |
TCGACTTCTCCTACGGTGTT+TGG | + | chr8.2:30708512-30708531 | None:intergenic | 50.0% | |
TGCTCCAAAGTCATAGGCTC+TGG | + | chr8.2:30707008-30707027 | None:intergenic | 50.0% | |
TGGATCAGATCCGAAACGAC+AGG | + | chr8.2:30708270-30708289 | None:intergenic | 50.0% | |
TGGGACATAGACCCATCACA+AGG | - | chr8.2:30706044-30706063 | MS.gene000462:CDS | 50.0% | |
TTCGAAACAGCTTGAGCTGG+TGG | - | chr8.2:30708706-30708725 | MS.gene000462:intron | 50.0% | |
! | CCAAAGTCATAGGCTCTGGT+TGG | + | chr8.2:30707004-30707023 | None:intergenic | 50.0% |
! | GGAAACTGACAGGAGTGCAT+AGG | - | chr8.2:30709141-30709160 | MS.gene000462:intron | 50.0% |
!! | ATAGGCTCTGGTTGGTCTTC+TGG | + | chr8.2:30706996-30707015 | None:intergenic | 50.0% |
GACTGCAGCAGCAGCAACCA+AGG | + | chr8.2:30708789-30708808 | None:intergenic | 60.0% | |
GCAGCAGCAACCAAGGATGG+TGG | + | chr8.2:30708782-30708801 | None:intergenic | 60.0% | |
GCAGCAGCAGCAACCAAGGA+TGG | + | chr8.2:30708785-30708804 | None:intergenic | 60.0% | |
TCCTGTCAGTTTCCCGGCTC+CGG | + | chr8.2:30709135-30709154 | None:intergenic | 60.0% | |
TTCCACCAGAAAGCCGGAGC+CGG | - | chr8.2:30709119-30709138 | MS.gene000462:intron | 60.0% | |
GTTTCCCGGCTCCGGCTTTC+TGG | + | chr8.2:30709127-30709146 | None:intergenic | 65.0% | |
TCCACCAGAAAGCCGGAGCC+GGG | - | chr8.2:30709120-30709139 | MS.gene000462:intron | 65.0% | |
GCCGGAGCCGGGAAACTGAC+AGG | - | chr8.2:30709131-30709150 | MS.gene000462:intron | 70.0% | |
TCCCGGCTCCGGCTTTCTGG+TGG | + | chr8.2:30709124-30709143 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 30705543 | 30709244 | 30705543 | ID=MS.gene000462 |
chr8.2 | mRNA | 30705543 | 30709244 | 30705543 | ID=MS.gene000462.t1;Parent=MS.gene000462 |
chr8.2 | exon | 30709187 | 30709244 | 30709187 | ID=MS.gene000462.t1.exon1;Parent=MS.gene000462.t1 |
chr8.2 | CDS | 30709187 | 30709244 | 30709187 | ID=cds.MS.gene000462.t1;Parent=MS.gene000462.t1 |
chr8.2 | exon | 30708914 | 30709046 | 30708914 | ID=MS.gene000462.t1.exon2;Parent=MS.gene000462.t1 |
chr8.2 | CDS | 30708914 | 30709046 | 30708914 | ID=cds.MS.gene000462.t1;Parent=MS.gene000462.t1 |
chr8.2 | exon | 30708722 | 30708778 | 30708722 | ID=MS.gene000462.t1.exon3;Parent=MS.gene000462.t1 |
chr8.2 | CDS | 30708722 | 30708778 | 30708722 | ID=cds.MS.gene000462.t1;Parent=MS.gene000462.t1 |
chr8.2 | exon | 30707965 | 30708010 | 30707965 | ID=MS.gene000462.t1.exon4;Parent=MS.gene000462.t1 |
chr8.2 | CDS | 30707965 | 30708010 | 30707965 | ID=cds.MS.gene000462.t1;Parent=MS.gene000462.t1 |
chr8.2 | exon | 30707726 | 30707866 | 30707726 | ID=MS.gene000462.t1.exon5;Parent=MS.gene000462.t1 |
chr8.2 | CDS | 30707726 | 30707866 | 30707726 | ID=cds.MS.gene000462.t1;Parent=MS.gene000462.t1 |
chr8.2 | exon | 30707513 | 30707638 | 30707513 | ID=MS.gene000462.t1.exon6;Parent=MS.gene000462.t1 |
chr8.2 | CDS | 30707513 | 30707638 | 30707513 | ID=cds.MS.gene000462.t1;Parent=MS.gene000462.t1 |
chr8.2 | exon | 30706753 | 30706842 | 30706753 | ID=MS.gene000462.t1.exon7;Parent=MS.gene000462.t1 |
chr8.2 | CDS | 30706753 | 30706842 | 30706753 | ID=cds.MS.gene000462.t1;Parent=MS.gene000462.t1 |
chr8.2 | exon | 30706455 | 30706676 | 30706455 | ID=MS.gene000462.t1.exon8;Parent=MS.gene000462.t1 |
chr8.2 | CDS | 30706455 | 30706676 | 30706455 | ID=cds.MS.gene000462.t1;Parent=MS.gene000462.t1 |
chr8.2 | exon | 30706167 | 30706265 | 30706167 | ID=MS.gene000462.t1.exon9;Parent=MS.gene000462.t1 |
chr8.2 | CDS | 30706167 | 30706265 | 30706167 | ID=cds.MS.gene000462.t1;Parent=MS.gene000462.t1 |
chr8.2 | exon | 30705893 | 30706071 | 30705893 | ID=MS.gene000462.t1.exon10;Parent=MS.gene000462.t1 |
chr8.2 | CDS | 30705893 | 30706071 | 30705893 | ID=cds.MS.gene000462.t1;Parent=MS.gene000462.t1 |
chr8.2 | exon | 30705543 | 30705693 | 30705543 | ID=MS.gene000462.t1.exon11;Parent=MS.gene000462.t1 |
chr8.2 | CDS | 30705543 | 30705693 | 30705543 | ID=cds.MS.gene000462.t1;Parent=MS.gene000462.t1 |
Gene Sequence |
Protein sequence |