Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene000639.t1 | XP_024639230.1 | 93.2 | 747 | 28 | 3 | 1 | 724 | 1 | 747 | 0.00E+00 | 1345.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene000639.t1 | A0A396HN66 | 93.2 | 747 | 28 | 3 | 1 | 724 | 1 | 747 | 0.0e+00 | 1345.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene36348 | MS.gene000639 | PPI |
MS.gene85146 | MS.gene000639 | PPI |
MS.gene85145 | MS.gene000639 | PPI |
MS.gene000639 | MS.gene76530 | PPI |
MS.gene069865 | MS.gene000639 | PPI |
MS.gene36347 | MS.gene000639 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene000639.t1 | MTR_5g028190 | 85.672 | 335 | 48 | 0 | 388 | 722 | 199 | 533 | 0.0 | 604 |
MS.gene000639.t1 | MTR_5g028190 | 70.000 | 200 | 57 | 2 | 123 | 319 | 1 | 200 | 2.35e-83 | 274 |
MS.gene000639.t1 | MTR_5g028130 | 76.471 | 340 | 76 | 2 | 388 | 724 | 1 | 339 | 0.0 | 524 |
MS.gene000639.t1 | MTR_5g028930 | 42.420 | 686 | 299 | 18 | 61 | 721 | 2 | 616 | 3.51e-145 | 438 |
MS.gene000639.t1 | MTR_5g028450 | 66.554 | 296 | 93 | 2 | 429 | 720 | 1 | 294 | 8.48e-129 | 384 |
MS.gene000639.t1 | MTR_5g028110 | 71.204 | 191 | 37 | 1 | 534 | 724 | 4 | 176 | 1.77e-86 | 270 |
MS.gene000639.t1 | MTR_5g091220 | 34.080 | 625 | 350 | 18 | 104 | 720 | 31 | 601 | 2.09e-78 | 263 |
MS.gene000639.t1 | MTR_3g455790 | 29.489 | 607 | 361 | 14 | 104 | 703 | 33 | 579 | 7.01e-67 | 232 |
MS.gene000639.t1 | MTR_3g055310 | 32.122 | 523 | 292 | 12 | 199 | 716 | 12 | 476 | 3.04e-66 | 227 |
MS.gene000639.t1 | MTR_3g055310 | 32.812 | 512 | 281 | 12 | 210 | 716 | 21 | 474 | 5.48e-66 | 226 |
MS.gene000639.t1 | MTR_3g055310 | 32.812 | 512 | 281 | 12 | 210 | 716 | 48 | 501 | 7.92e-66 | 227 |
MS.gene000639.t1 | MTR_3g055310 | 33.548 | 465 | 254 | 9 | 252 | 716 | 39 | 448 | 1.67e-64 | 222 |
MS.gene000639.t1 | MTR_6g017215 | 58.152 | 184 | 77 | 0 | 532 | 715 | 6 | 189 | 2.32e-64 | 214 |
MS.gene000639.t1 | MTR_2g438740 | 35.467 | 375 | 214 | 8 | 353 | 722 | 217 | 568 | 5.20e-64 | 223 |
MS.gene000639.t1 | MTR_2g438740 | 31.953 | 169 | 101 | 7 | 103 | 269 | 41 | 197 | 3.50e-13 | 73.2 |
MS.gene000639.t1 | MTR_3g055310 | 33.925 | 451 | 243 | 9 | 266 | 716 | 1 | 396 | 7.99e-64 | 218 |
MS.gene000639.t1 | MTR_5g028510 | 42.342 | 333 | 141 | 8 | 24 | 316 | 6 | 327 | 2.05e-63 | 215 |
MS.gene000639.t1 | MTR_3g055310 | 40.767 | 287 | 159 | 3 | 427 | 713 | 55 | 330 | 4.79e-62 | 211 |
MS.gene000639.t1 | MTR_5g028690 | 50.500 | 200 | 94 | 1 | 527 | 721 | 36 | 235 | 7.04e-60 | 202 |
MS.gene000639.t1 | MTR_2g438440 | 38.908 | 293 | 175 | 3 | 429 | 720 | 396 | 685 | 1.58e-56 | 205 |
MS.gene000639.t1 | MTR_3g452020 | 27.581 | 620 | 383 | 15 | 104 | 714 | 33 | 595 | 4.26e-56 | 202 |
MS.gene000639.t1 | MTR_2g438400 | 37.288 | 295 | 177 | 4 | 429 | 720 | 255 | 544 | 1.39e-53 | 194 |
MS.gene000639.t1 | MTR_2g438700 | 36.519 | 293 | 181 | 4 | 429 | 719 | 399 | 688 | 2.02e-50 | 188 |
MS.gene000639.t1 | MTR_2g438720 | 36.577 | 298 | 176 | 6 | 429 | 720 | 401 | 691 | 3.32e-50 | 187 |
MS.gene000639.t1 | MTR_2g438760 | 34.812 | 293 | 187 | 3 | 430 | 720 | 271 | 561 | 1.04e-49 | 184 |
MS.gene000639.t1 | MTR_2g438760 | 26.054 | 261 | 167 | 9 | 53 | 311 | 5 | 241 | 1.48e-13 | 74.3 |
MS.gene000639.t1 | MTR_2g438640 | 36.177 | 293 | 183 | 3 | 429 | 720 | 401 | 690 | 1.78e-48 | 182 |
MS.gene000639.t1 | MTR_3g452020 | 31.250 | 320 | 214 | 4 | 385 | 702 | 88 | 403 | 1.33e-43 | 163 |
MS.gene000639.t1 | MTR_5g028900 | 51.923 | 156 | 63 | 2 | 533 | 688 | 3 | 146 | 3.05e-43 | 153 |
MS.gene000639.t1 | MTR_2g438640 | 34.130 | 293 | 163 | 3 | 429 | 720 | 401 | 664 | 6.42e-43 | 166 |
MS.gene000639.t1 | MTR_5g028840 | 45.699 | 186 | 92 | 1 | 532 | 717 | 2 | 178 | 4.90e-42 | 152 |
MS.gene000639.t1 | MTR_2g020510 | 36.861 | 274 | 163 | 3 | 429 | 702 | 390 | 653 | 5.18e-42 | 163 |
MS.gene000639.t1 | MTR_5g028830 | 40.230 | 261 | 132 | 9 | 284 | 531 | 39 | 288 | 1.87e-40 | 150 |
MS.gene000639.t1 | MTR_2g017930 | 26.299 | 635 | 393 | 19 | 139 | 723 | 37 | 646 | 2.82e-40 | 158 |
MS.gene000639.t1 | MTR_3g058570 | 33.550 | 307 | 181 | 5 | 428 | 721 | 83 | 379 | 2.70e-39 | 150 |
MS.gene000639.t1 | MTR_2g020450 | 34.256 | 289 | 185 | 4 | 429 | 716 | 393 | 677 | 9.04e-37 | 147 |
MS.gene000639.t1 | MTR_2g020450 | 28.846 | 208 | 131 | 7 | 102 | 303 | 4 | 200 | 1.84e-12 | 71.2 |
MS.gene000639.t1 | MTR_2g020470 | 34.672 | 274 | 149 | 5 | 429 | 702 | 392 | 635 | 4.65e-36 | 145 |
MS.gene000639.t1 | MTR_2g020470 | 26.887 | 212 | 134 | 8 | 102 | 305 | 4 | 202 | 7.97e-11 | 65.9 |
MS.gene000639.t1 | MTR_5g085360 | 26.008 | 719 | 401 | 28 | 107 | 713 | 23 | 722 | 6.26e-34 | 139 |
MS.gene000639.t1 | MTR_3g050500 | 29.126 | 309 | 208 | 5 | 416 | 716 | 414 | 719 | 1.52e-32 | 135 |
MS.gene000639.t1 | MTR_3g051060 | 28.669 | 293 | 204 | 3 | 430 | 718 | 435 | 726 | 1.13e-30 | 129 |
MS.gene000639.t1 | MTR_3g051060 | 29.108 | 213 | 126 | 7 | 107 | 304 | 28 | 230 | 9.50e-14 | 75.5 |
MS.gene000639.t1 | MTR_2g438640 | 37.368 | 190 | 117 | 2 | 532 | 720 | 399 | 587 | 1.49e-29 | 124 |
MS.gene000639.t1 | MTR_5g028920 | 41.071 | 168 | 94 | 3 | 368 | 534 | 64 | 227 | 5.63e-29 | 116 |
MS.gene000639.t1 | MTR_5g085350 | 31.164 | 292 | 195 | 4 | 429 | 716 | 424 | 713 | 1.45e-28 | 122 |
MS.gene000639.t1 | MTR_5g085350 | 31.164 | 292 | 195 | 4 | 429 | 716 | 437 | 726 | 1.83e-28 | 122 |
MS.gene000639.t1 | MTR_5g085340 | 29.730 | 296 | 202 | 3 | 429 | 719 | 443 | 737 | 1.10e-27 | 119 |
MS.gene000639.t1 | MTR_1g113820 | 33.790 | 219 | 131 | 6 | 428 | 641 | 275 | 484 | 3.00e-23 | 105 |
MS.gene000639.t1 | MTR_2g438470 | 40.741 | 135 | 77 | 2 | 474 | 608 | 366 | 497 | 8.52e-22 | 100 |
MS.gene000639.t1 | MTR_1g113730 | 29.018 | 224 | 146 | 5 | 401 | 622 | 23 | 235 | 9.05e-19 | 89.4 |
MS.gene000639.t1 | MTR_1g113760 | 24.904 | 261 | 184 | 5 | 420 | 674 | 231 | 485 | 1.46e-15 | 80.9 |
MS.gene000639.t1 | MTR_6g016185 | 30.653 | 199 | 120 | 8 | 457 | 654 | 16 | 197 | 2.04e-15 | 75.9 |
MS.gene000639.t1 | MTR_3g055750 | 28.505 | 214 | 139 | 6 | 104 | 314 | 33 | 235 | 4.60e-14 | 75.1 |
MS.gene000639.t1 | MTR_3g058550 | 31.667 | 180 | 100 | 6 | 139 | 304 | 9 | 179 | 4.52e-13 | 69.7 |
MS.gene000639.t1 | MTR_2g438580 | 39.474 | 76 | 45 | 1 | 546 | 621 | 2 | 76 | 7.84e-11 | 59.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene000639.t1 | AT3G18670 | 36.019 | 633 | 353 | 15 | 104 | 724 | 50 | 642 | 1.78e-123 | 383 |
MS.gene000639.t1 | AT3G18670 | 43.529 | 340 | 185 | 5 | 388 | 724 | 252 | 587 | 2.02e-87 | 287 |
MS.gene000639.t1 | AT3G18670 | 34.450 | 209 | 117 | 7 | 104 | 303 | 50 | 247 | 3.28e-27 | 117 |
MS.gene000639.t1 | AT5G04690 | 31.320 | 629 | 379 | 11 | 95 | 720 | 67 | 645 | 1.05e-83 | 279 |
MS.gene000639.t1 | AT5G04700 | 31.461 | 623 | 375 | 11 | 103 | 720 | 80 | 655 | 1.04e-82 | 276 |
MS.gene000639.t1 | AT5G04690 | 30.794 | 630 | 367 | 13 | 95 | 720 | 67 | 631 | 1.28e-78 | 265 |
MS.gene000639.t1 | AT5G04680 | 30.094 | 638 | 401 | 17 | 103 | 720 | 67 | 679 | 5.00e-73 | 251 |
MS.gene000639.t1 | AT5G04680 | 30.016 | 633 | 379 | 16 | 103 | 720 | 67 | 650 | 1.77e-71 | 246 |
MS.gene000639.t1 | AT5G04730 | 30.928 | 582 | 339 | 14 | 151 | 720 | 58 | 588 | 5.83e-70 | 240 |
MS.gene000639.t1 | AT5G04680 | 29.226 | 633 | 370 | 16 | 103 | 720 | 67 | 636 | 2.68e-68 | 237 |
MS.gene000639.t1 | AT5G04680 | 30.944 | 572 | 329 | 16 | 164 | 720 | 7 | 527 | 5.24e-68 | 233 |
MS.gene000639.t1 | AT5G35810 | 38.079 | 302 | 178 | 4 | 429 | 723 | 35 | 334 | 3.26e-62 | 212 |
MS.gene000639.t1 | AT5G04690 | 31.238 | 541 | 329 | 14 | 199 | 720 | 95 | 611 | 8.72e-59 | 210 |
MS.gene000639.t1 | AT5G04690 | 30.000 | 210 | 136 | 4 | 95 | 302 | 67 | 267 | 3.00e-17 | 86.3 |
MS.gene000639.t1 | AT3G54065 | 46.512 | 172 | 86 | 1 | 518 | 683 | 8 | 179 | 6.63e-46 | 164 |
MS.gene000639.t1 | AT5G04700 | 26.328 | 433 | 269 | 9 | 103 | 532 | 80 | 465 | 4.20e-33 | 134 |
MS.gene000639.t1 | AT5G35830 | 31.737 | 167 | 101 | 5 | 99 | 262 | 81 | 237 | 2.68e-13 | 71.6 |
Find 161 sgRNAs with CRISPR-Local
Find 309 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AATTCATGCACTTCTCTTTC+AGG | 0.124188 | 5.1:+19308095 | None:intergenic |
TTGCACTTGGCAGGATATTT+AGG | 0.127030 | 5.1:-19307013 | MS.gene000639:CDS |
CCAAAGAATTCAAGAGTTTA+AGG | 0.157617 | 5.1:-19307290 | MS.gene000639:CDS |
TGTATCACTGCAGAAATATT+TGG | 0.219312 | 5.1:-19309045 | MS.gene000639:intron |
TTCACTTGCTATGCTCTTAA+AGG | 0.220345 | 5.1:-19306006 | MS.gene000639:CDS |
AACTTACCCAGCTGCTTTAC+TGG | 0.237505 | 5.1:+19307850 | None:intergenic |
CCTTAAACTCTTGAATTCTT+TGG | 0.238324 | 5.1:+19307290 | None:intergenic |
TAAAGAAGCCTGGAATAAAT+TGG | 0.241875 | 5.1:-19310413 | MS.gene000639:CDS |
ATACATGATGCAACTGTAAA+TGG | 0.242921 | 5.1:-19307085 | MS.gene000639:CDS |
TTAGAACGCGCACCAATTTC+AGG | 0.251761 | 5.1:+19310541 | None:intergenic |
CTTCGCTATATTCGTGTTTC+CGG | 0.254247 | 5.1:+19309263 | None:intergenic |
AATATATTCCACATCCTCTA+TGG | 0.260429 | 5.1:-19309424 | MS.gene000639:CDS |
GTGACCTCTATTCCTGAAAT+TGG | 0.292763 | 5.1:-19310553 | MS.gene000639:CDS |
TGCACTTGGCAGGATATTTA+GGG | 0.308043 | 5.1:-19307012 | MS.gene000639:CDS |
TTTCCAAGTGGTAGTGGATA+TGG | 0.311953 | 5.1:-19308830 | MS.gene000639:CDS |
ACTTCGGTCCTTCTCTTCAT+TGG | 0.319322 | 5.1:-19306146 | MS.gene000639:CDS |
AATTGTATCCATCAGGAATA+AGG | 0.321064 | 5.1:-19307372 | MS.gene000639:intron |
CTTCACGTTGCGGTAGTTGC+TGG | 0.322177 | 5.1:-19309390 | MS.gene000639:CDS |
CTAAGACTGAATATGAGATT+TGG | 0.338368 | 5.1:-19310522 | MS.gene000639:CDS |
AGGGTAATCCTGACCTCTTA+TGG | 0.352153 | 5.1:-19307180 | MS.gene000639:CDS |
CCAAAGACAACTACGAAAAC+TGG | 0.369243 | 5.1:-19310624 | MS.gene000639:CDS |
CGAGGAAATTGTGAAGAAAT+TGG | 0.372095 | 5.1:-19309364 | MS.gene000639:CDS |
ATGCAAACTCGTTTATTAAG+AGG | 0.378242 | 5.1:-19309458 | MS.gene000639:CDS |
AACAGGGATTTCACCATCAT+TGG | 0.379563 | 5.1:+19309182 | None:intergenic |
TGTTCTTCTTGCTGCTGCTA+AGG | 0.379583 | 5.1:-19309163 | MS.gene000639:CDS |
TCACATGTCATTTCAGAATT+CGG | 0.380455 | 5.1:-19307581 | MS.gene000639:CDS |
TAGTGAAAGCTGGGGAGAAA+TGG | 0.384321 | 5.1:-19306349 | MS.gene000639:CDS |
AATAAGTAATAAGTTTCAAT+TGG | 0.387620 | 5.1:+19305872 | None:intergenic |
AGTTGCACCCAATTTATTCC+AGG | 0.399506 | 5.1:+19310405 | None:intergenic |
GCTGCAGCTTTCACTGTCCC+TGG | 0.408383 | 5.1:-19306266 | MS.gene000639:CDS |
TTAGCAGCAGCAAGAAGAAC+AGG | 0.410668 | 5.1:+19309165 | None:intergenic |
TAGAAACCACAGAGAAGAAA+AGG | 0.416389 | 5.1:+19306048 | None:intergenic |
TTCCAAGTGGTAGTGGATAT+GGG | 0.416844 | 5.1:-19308829 | MS.gene000639:CDS |
AAATGCCGTGTAGACGCATT+TGG | 0.419337 | 5.1:-19307046 | MS.gene000639:CDS |
AATTCCATGTTGCACTTGGC+AGG | 0.419647 | 5.1:-19307022 | MS.gene000639:CDS |
ATCAGAACTTAGAGAGGCTT+CGG | 0.421195 | 5.1:-19307266 | MS.gene000639:CDS |
GGGTAATCCTGACCTCTTAT+GGG | 0.423361 | 5.1:-19307179 | MS.gene000639:CDS |
CTAATATGAGTAAGATTCTC+TGG | 0.424630 | 5.1:+19310451 | None:intergenic |
TCACTTGCTATGCTCTTAAA+GGG | 0.427681 | 5.1:-19306005 | MS.gene000639:CDS |
CATTGGTCTTCATAGATAAC+AGG | 0.427879 | 5.1:+19309199 | None:intergenic |
ACCTTAGTGGCAATGACTTA+AGG | 0.429666 | 5.1:+19306090 | None:intergenic |
AGATGCAAAGAGAAATTCTA+TGG | 0.430747 | 5.1:-19306949 | MS.gene000639:CDS |
TTCACGTTGCGGTAGTTGCT+GGG | 0.432176 | 5.1:-19309389 | MS.gene000639:CDS |
TCTCTTTGCATCTGCATAGC+AGG | 0.438079 | 5.1:+19306959 | None:intergenic |
GAGATTTGGAACAGGAAGAA+TGG | 0.441267 | 5.1:-19310508 | MS.gene000639:CDS |
CCACAAATCACACTTTGAAT+CGG | 0.443086 | 5.1:-19308897 | MS.gene000639:CDS |
TCTGTGTTTCCAAGTGGTAG+TGG | 0.443413 | 5.1:-19308836 | MS.gene000639:CDS |
CTGAATATGAGATTTGGAAC+AGG | 0.444534 | 5.1:-19310516 | MS.gene000639:CDS |
GTTCTTCTTGCTGCTGCTAA+GGG | 0.445513 | 5.1:-19309162 | MS.gene000639:CDS |
TCGGTACTATTAAAGTTCTC+TGG | 0.448532 | 5.1:-19307562 | MS.gene000639:intron |
GACGGAACTAGAACGATAAC+AGG | 0.451356 | 5.1:+19305939 | None:intergenic |
CACAAGGAGCTAGTGAAAGC+TGG | 0.455549 | 5.1:-19306359 | MS.gene000639:CDS |
CGATTCAAAGTGTGATTTGT+GGG | 0.456154 | 5.1:+19308898 | None:intergenic |
TATAGCGAAGTGTATGACTA+TGG | 0.458675 | 5.1:-19309250 | MS.gene000639:CDS |
TCCTTAAGTCATTGCCACTA+AGG | 0.460081 | 5.1:-19306091 | MS.gene000639:CDS |
TCAATGGCCCATAAGAGGTC+AGG | 0.465739 | 5.1:+19307172 | None:intergenic |
TTTCAGCGTAACGAGCCGTT+AGG | 0.467061 | 5.1:+19306120 | None:intergenic |
GTTTATAGATGCAATGAGAA+AGG | 0.467103 | 5.1:-19307200 | MS.gene000639:CDS |
TTGTGGGCAAGAGGCATTTG+AGG | 0.467341 | 5.1:+19308914 | None:intergenic |
CTTGTTAGAAACTATCTTGT+GGG | 0.467922 | 5.1:-19310595 | MS.gene000639:CDS |
ATGCGTGCCAATGCGTATAA+TGG | 0.471182 | 5.1:+19308863 | None:intergenic |
TGTGCAGCGATTTATATTGA+AGG | 0.474499 | 5.1:+19309508 | None:intergenic |
TTCATATTGCTAAAGAAGCC+TGG | 0.477292 | 5.1:-19310423 | MS.gene000639:CDS |
ACAAGGAGCTAGTGAAAGCT+GGG | 0.477954 | 5.1:-19306358 | MS.gene000639:CDS |
AAAGAAGCCTGGAATAAATT+GGG | 0.481257 | 5.1:-19310412 | MS.gene000639:intron |
AGCTGGTTCATTTACTCTTG+TGG | 0.482801 | 5.1:-19306315 | MS.gene000639:CDS |
AGATTTGGAACAGGAAGAAT+GGG | 0.485550 | 5.1:-19310507 | MS.gene000639:CDS |
TCAGCTCAGCAACAAGAGCT+AGG | 0.486371 | 5.1:+19309286 | None:intergenic |
CATAGCAAGTGAAGCACAGA+AGG | 0.486804 | 5.1:+19306016 | None:intergenic |
AGTGAAAGCTGGGGAGAAAT+GGG | 0.487029 | 5.1:-19306348 | MS.gene000639:CDS |
GTGAAGAAATTGGTGAAGGA+AGG | 0.488215 | 5.1:-19309354 | MS.gene000639:CDS |
AATTGTGCACCCCAAGTGTA+AGG | 0.491201 | 5.1:-19306432 | MS.gene000639:CDS |
TTGCATCTGCATAGCAGGAC+CGG | 0.495069 | 5.1:+19306964 | None:intergenic |
ATATATTCCACATCCTCTAT+GGG | 0.496055 | 5.1:-19309423 | MS.gene000639:CDS |
TTGTCTTGATTGTTTCCACC+AGG | 0.496117 | 5.1:+19306248 | None:intergenic |
TTGTACACCGTTGGAAGACC+TGG | 0.502955 | 5.1:-19309109 | MS.gene000639:CDS |
TTTATAGATGCAATGAGAAA+GGG | 0.503030 | 5.1:-19307199 | MS.gene000639:CDS |
ATCATGTATGAGTTCGAAAA+CGG | 0.503307 | 5.1:+19307099 | None:intergenic |
TCTTGTGGGACATGGTCTGA+GGG | 0.504499 | 5.1:-19310581 | MS.gene000639:CDS |
TGCGATAATTATCATCGGCC+AGG | 0.509460 | 5.1:+19309091 | None:intergenic |
TGGCAATTCCATGTTGCACT+TGG | 0.511014 | 5.1:-19307026 | MS.gene000639:CDS |
TTGTGAAGCAGTAGAATGAC+AGG | 0.514230 | 5.1:-19310688 | None:intergenic |
CAATTCAAAGCTTCTTTCGT+AGG | 0.514295 | 5.1:-19308026 | MS.gene000639:intron |
TCTTTACCGTTGTACACCGT+TGG | 0.515694 | 5.1:-19309118 | MS.gene000639:CDS |
TCTGATCTTGATCGTAGATC+CGG | 0.515841 | 5.1:-19306983 | MS.gene000639:CDS |
CGCACCAATTTCAGGAATAG+AGG | 0.521001 | 5.1:+19310549 | None:intergenic |
CTTTAGGAAGGTTATGTGGA+CGG | 0.525505 | 5.1:-19307888 | MS.gene000639:intron |
GCTCTTGTTGCTGAGCTGAC+CGG | 0.526277 | 5.1:-19309282 | MS.gene000639:CDS |
CCGATTCAAAGTGTGATTTG+TGG | 0.526820 | 5.1:+19308897 | None:intergenic |
TGCAAACTCGTTTATTAAGA+GGG | 0.527286 | 5.1:-19309457 | MS.gene000639:CDS |
TCTTGCAAATATTGCCAAAG+AGG | 0.534735 | 5.1:-19308054 | MS.gene000639:CDS |
TGTGATGTCGTGCAAGAACA+AGG | 0.535047 | 5.1:+19306217 | None:intergenic |
GAGGCATTTGAGGAAATCGT+TGG | 0.537554 | 5.1:+19308924 | None:intergenic |
TTTATCGCCAGTAAAGCAGC+TGG | 0.539120 | 5.1:-19307857 | MS.gene000639:CDS |
GGTCCTCCCCATAGAGGATG+TGG | 0.539677 | 5.1:+19309416 | None:intergenic |
AAGAGAAATTCTATGGTTCA+AGG | 0.541072 | 5.1:-19306942 | MS.gene000639:intron |
TCGTAGTTGTCTTTGGTCAG+TGG | 0.542773 | 5.1:+19310631 | None:intergenic |
TGTGCAACCATTATACGCAT+TGG | 0.543058 | 5.1:-19308870 | MS.gene000639:CDS |
AGTGCGAAAAGTAACCTTAG+TGG | 0.548121 | 5.1:+19306077 | None:intergenic |
ATGTTGCAAGCAGCAAAGCA+TGG | 0.548691 | 5.1:-19307232 | MS.gene000639:CDS |
CAGCTTTCACTAGCTCCTTG+TGG | 0.553008 | 5.1:+19306360 | None:intergenic |
ATCTTGTGGGACATGGTCTG+AGG | 0.556008 | 5.1:-19310582 | MS.gene000639:CDS |
AACCCATATCCACTACCACT+TGG | 0.557493 | 5.1:+19308827 | None:intergenic |
AAGTGTGATTTGTGGGCAAG+AGG | 0.558162 | 5.1:+19308905 | None:intergenic |
TCTTGTTAGAAACTATCTTG+TGG | 0.559427 | 5.1:-19310596 | MS.gene000639:CDS |
AGAAACTATCTTGTGGGACA+TGG | 0.562860 | 5.1:-19310589 | MS.gene000639:CDS |
AGAAACCACAGAGAAGAAAA+GGG | 0.563826 | 5.1:+19306049 | None:intergenic |
TGTTGCAAGCAGCAAAGCAT+GGG | 0.564523 | 5.1:-19307231 | MS.gene000639:CDS |
GCTTTAATTTGCAGGTGTGG+TGG | 0.564757 | 5.1:-19309541 | MS.gene000639:intron |
ACTTGAAAATCTCAAGGAAG+AGG | 0.567742 | 5.1:+19305907 | None:intergenic |
TAAGGAATCAGAACTTAGAG+AGG | 0.568613 | 5.1:-19307272 | MS.gene000639:CDS |
GTTTCTTTAGGAAGGTTATG+TGG | 0.570625 | 5.1:-19307892 | MS.gene000639:intron |
GCCGATGATAATTATCGCAA+TGG | 0.574637 | 5.1:-19309087 | MS.gene000639:CDS |
TGAAGAAATTGGTGAAGGAA+GGG | 0.574748 | 5.1:-19309353 | MS.gene000639:CDS |
CAGCTCAGCAACAAGAGCTA+GGG | 0.580236 | 5.1:+19309287 | None:intergenic |
AAATGGGCAAAAGATACAGC+TGG | 0.580445 | 5.1:-19306332 | MS.gene000639:CDS |
AGGAAGAGGCGCAACTGTGA+CGG | 0.582572 | 5.1:+19305921 | None:intergenic |
TTATCTATGAAGACCAATGA+TGG | 0.582929 | 5.1:-19309195 | MS.gene000639:CDS |
TAAGAAAATATCACGGTCAG+AGG | 0.584733 | 5.1:-19309223 | MS.gene000639:CDS |
TGCGGTAGTTGCTGGGCACG+AGG | 0.589759 | 5.1:-19309382 | MS.gene000639:CDS |
TCTCTTCATTGGAATCCTAA+CGG | 0.591072 | 5.1:-19306135 | MS.gene000639:CDS |
CTGTAGACTTGAAAATCTCA+AGG | 0.594097 | 5.1:+19305901 | None:intergenic |
GCAGCTTTCACTGTCCCTGG+TGG | 0.601445 | 5.1:-19306263 | MS.gene000639:CDS |
GGAACAAGCATTGCAGCGAG+TGG | 0.605832 | 5.1:-19310667 | MS.gene000639:CDS |
AGTATATTGAGAGCGGTGAG+TGG | 0.609550 | 5.1:-19309485 | MS.gene000639:CDS |
ACCATTGCGATAATTATCAT+CGG | 0.609954 | 5.1:+19309086 | None:intergenic |
TAGAACGATAACAGGAACAC+TGG | 0.611619 | 5.1:+19305947 | None:intergenic |
AACTACCGCAACGTGAAGAA+CGG | 0.612033 | 5.1:+19309395 | None:intergenic |
AATTGCCAAATGCGTCTACA+CGG | 0.612652 | 5.1:+19307041 | None:intergenic |
TTAGGATTCCAATGAAGAGA+AGG | 0.614556 | 5.1:+19306138 | None:intergenic |
ATGCCTTCTGTGTTTCCAAG+TGG | 0.615562 | 5.1:-19308842 | MS.gene000639:CDS |
TGCAACTGTAAATGGACGGA+AGG | 0.618113 | 5.1:-19307077 | MS.gene000639:CDS |
CTCACGAGGCTTCTTATCGT+CGG | 0.618144 | 5.1:+19306397 | None:intergenic |
CTTGTGGGACATGGTCTGAG+GGG | 0.619674 | 5.1:-19310580 | MS.gene000639:CDS |
CTACCACTTGGAAACACAGA+AGG | 0.622603 | 5.1:+19308839 | None:intergenic |
AAGAACGGTCCTCCCCATAG+AGG | 0.622685 | 5.1:+19309410 | None:intergenic |
AATTGTGAAGAAATTGGTGA+AGG | 0.625256 | 5.1:-19309358 | MS.gene000639:CDS |
ATATCCTGCCAAGTGCAACA+TGG | 0.627952 | 5.1:+19307018 | None:intergenic |
GGTGGAAACAATCAAGACAA+TGG | 0.629811 | 5.1:-19306245 | MS.gene000639:CDS |
ATGATGCAACTGTAAATGGA+CGG | 0.638038 | 5.1:-19307081 | MS.gene000639:CDS |
CATATCATTCAACTAACATG+TGG | 0.643061 | 5.1:-19310475 | MS.gene000639:CDS |
TGTCTTGATTGTTTCCACCA+GGG | 0.652150 | 5.1:+19306249 | None:intergenic |
GAGGACCGTTCTTCACGTTG+CGG | 0.655029 | 5.1:-19309400 | MS.gene000639:CDS |
CTTTCTGTAAATAACTCACG+AGG | 0.657348 | 5.1:+19306383 | None:intergenic |
GTGATGTCGTGCAAGAACAA+GGG | 0.659099 | 5.1:+19306218 | None:intergenic |
ATTCCACATCCTCTATGGGG+AGG | 0.660094 | 5.1:-19309419 | MS.gene000639:CDS |
TAGCAGCAGCAAGAAGAACA+GGG | 0.665135 | 5.1:+19309166 | None:intergenic |
TTGGAACAGGAAGAATGGGA+AGG | 0.668429 | 5.1:-19310503 | MS.gene000639:CDS |
TATTTCAAGAGCTACACGGT+AGG | 0.669157 | 5.1:+19307327 | None:intergenic |
GTGAAAATGAAAGACAATCG+AGG | 0.669964 | 5.1:-19309318 | MS.gene000639:CDS |
TCATCGGCCAGGTCTTCCAA+CGG | 0.671668 | 5.1:+19309102 | None:intergenic |
TGGTATATAAGAAAATATCA+CGG | 0.677081 | 5.1:-19309230 | MS.gene000639:CDS |
CTACGATCAAGATCAGAGGA+AGG | 0.678354 | 5.1:+19306989 | None:intergenic |
CTGCACAAGTATATTGAGAG+CGG | 0.680709 | 5.1:-19309492 | MS.gene000639:CDS |
GGATCTACGATCAAGATCAG+AGG | 0.680818 | 5.1:+19306985 | None:intergenic |
TTATCGCCAGTAAAGCAGCT+GGG | 0.681222 | 5.1:-19307856 | MS.gene000639:intron |
TCAATATTTCAAGAGCTACA+CGG | 0.684421 | 5.1:+19307323 | None:intergenic |
GGTCTTCCAACGGTGTACAA+CGG | 0.687225 | 5.1:+19309112 | None:intergenic |
TATATTCCACATCCTCTATG+GGG | 0.688060 | 5.1:-19309422 | MS.gene000639:CDS |
CAAGGAGCTAGTGAAAGCTG+GGG | 0.701952 | 5.1:-19306357 | MS.gene000639:CDS |
GTTATTTACAGAAAGCCACA+AGG | 0.702046 | 5.1:-19306375 | MS.gene000639:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACTTTATAAAAGAAATTTAA+AGG | - | chr5.1:19307973-19307992 | MS.gene000639:intron | 10.0% |
!! | CTTAAATACTTATAATATTA+GGG | - | chr5.1:19306934-19306953 | MS.gene000639:intron | 10.0% |
!! | TCTTAAATACTTATAATATT+AGG | - | chr5.1:19306933-19306952 | MS.gene000639:intron | 10.0% |
!! | AAACTCCTTTAATATATTAT+TGG | + | chr5.1:19308114-19308133 | None:intergenic | 15.0% |
!! | ATTTAAAGGTGATTTATAAA+AGG | - | chr5.1:19307987-19308006 | MS.gene000639:intron | 15.0% |
!! | TAATTAATTAATCACAAAGA+GGG | + | chr5.1:19309149-19309168 | None:intergenic | 15.0% |
!! | TACTTCCAATAATATATTAA+AGG | - | chr5.1:19308106-19308125 | MS.gene000639:CDS | 15.0% |
!! | TTAATTAATTAATCACAAAG+AGG | + | chr5.1:19309150-19309169 | None:intergenic | 15.0% |
!! | TTATTAAACAGTAAAAGTTT+AGG | - | chr5.1:19306777-19306796 | MS.gene000639:intron | 15.0% |
!! | TTTAAAGGTGATTTATAAAA+GGG | - | chr5.1:19307988-19308007 | MS.gene000639:intron | 15.0% |
!!! | AAAAACTAAATTTGAAATTC+TGG | - | chr5.1:19309906-19309925 | MS.gene000639:intron | 15.0% |
!!! | ACTGAATTTTAATTAAATTG+AGG | - | chr5.1:19307547-19307566 | MS.gene000639:intron | 15.0% |
!!! | ATTCAAATGTACTTATTTTT+GGG | + | chr5.1:19306870-19306889 | None:intergenic | 15.0% |
!!! | CAAAAGTTTGTATTTTATAA+AGG | + | chr5.1:19308030-19308049 | None:intergenic | 15.0% |
!!! | CTGAATTTTAATTAAATTGA+GGG | - | chr5.1:19307548-19307567 | MS.gene000639:intron | 15.0% |
!!! | TATTCAAATGTACTTATTTT+TGG | + | chr5.1:19306871-19306890 | None:intergenic | 15.0% |
!!! | TTATTAATCCTTGTTTAAAT+AGG | - | chr5.1:19309028-19309047 | MS.gene000639:intron | 15.0% |
!! | AAACTATGTCTAATATGTAT+AGG | + | chr5.1:19306286-19306305 | None:intergenic | 20.0% |
!! | AACTATGTCTAATATGTATA+GGG | + | chr5.1:19306285-19306304 | None:intergenic | 20.0% |
!! | AATTAATTAATCACAAAGAG+GGG | + | chr5.1:19309148-19309167 | None:intergenic | 20.0% |
!! | CAATTAGTAAGGAAAATAAA+TGG | - | chr5.1:19306959-19306978 | MS.gene000639:CDS | 20.0% |
!! | CTAATATACCTATTTAAACA+AGG | + | chr5.1:19309039-19309058 | None:intergenic | 20.0% |
!! | TACACATTAATCTATTCTTT+GGG | - | chr5.1:19306243-19306262 | MS.gene000639:CDS | 20.0% |
!! | TAGTTTCTAAATGTATTGAA+AGG | - | chr5.1:19306300-19306319 | MS.gene000639:CDS | 20.0% |
!! | TGGTATATAAGAAAATATCA+CGG | - | chr5.1:19307330-19307349 | MS.gene000639:CDS | 20.0% |
!! | TTATAACTAAGAACAATCAA+CGG | - | chr5.1:19306816-19306835 | MS.gene000639:intron | 20.0% |
!!! | ACACTTTATTTATTATCAAG+TGG | + | chr5.1:19306519-19306538 | None:intergenic | 20.0% |
!!! | ATACATGACTTTTAAATAAG+TGG | - | chr5.1:19309969-19309988 | MS.gene000639:intron | 20.0% |
!!! | CAATAAGGAAAGATTTTTAA+AGG | - | chr5.1:19306672-19306691 | MS.gene000639:intron | 20.0% |
!!! | CATTTATTTTCCTTACTAAT+TGG | + | chr5.1:19306961-19306980 | None:intergenic | 20.0% |
!!! | TCAAATTTAGTTTTTGAAGT+TGG | + | chr5.1:19309901-19309920 | None:intergenic | 20.0% |
!!! | TTGAATATTGTGATTTTAGT+GGG | - | chr5.1:19306884-19306903 | MS.gene000639:intron | 20.0% |
!!! | TTTACGCTTTTTTTTTTTTC+AGG | - | chr5.1:19308938-19308957 | MS.gene000639:CDS | 20.0% |
!!! | TTTGAATATTGTGATTTTAG+TGG | - | chr5.1:19306883-19306902 | MS.gene000639:intron | 20.0% |
! | AAAGTCATGTATCTCAAAAT+TGG | + | chr5.1:19309961-19309980 | None:intergenic | 25.0% |
! | AATGAATACTATATGTGTAG+TGG | + | chr5.1:19308076-19308095 | None:intergenic | 25.0% |
! | AATTTGAAAAGTAAGCGAAA+TGG | + | chr5.1:19307813-19307832 | None:intergenic | 25.0% |
! | AGCTAATGTTTATTAGCAAT+AGG | - | chr5.1:19306699-19306718 | MS.gene000639:intron | 25.0% |
! | ATAAATAAAGTGTGTGAATG+AGG | - | chr5.1:19306526-19306545 | MS.gene000639:intron | 25.0% |
! | ATCAACACACATATATAACA+GGG | + | chr5.1:19308905-19308924 | None:intergenic | 25.0% |
! | ATGAATAAGATAGTAATGTG+TGG | + | chr5.1:19310027-19310046 | None:intergenic | 25.0% |
! | ATGTTTATTAGCAATAGGTA+AGG | - | chr5.1:19306704-19306723 | MS.gene000639:intron | 25.0% |
! | ATTGTATGAGATGTTACAAA+TGG | - | chr5.1:19306607-19306626 | MS.gene000639:intron | 25.0% |
! | CTGAAGATTATTAATCTTCT+CGG | - | chr5.1:19308643-19308662 | MS.gene000639:intron | 25.0% |
! | GAATGATTGTACTTACAATA+AGG | + | chr5.1:19309123-19309142 | None:intergenic | 25.0% |
! | GAGTAAATAATGAATGAGAT+TGG | - | chr5.1:19308338-19308357 | MS.gene000639:intron | 25.0% |
! | GCCATTGATAAAAATAAAAG+AGG | - | chr5.1:19309403-19309422 | MS.gene000639:CDS | 25.0% |
! | GTACACATTAATCTATTCTT+TGG | - | chr5.1:19306242-19306261 | MS.gene000639:CDS | 25.0% |
! | TAGTTATAACGCTTAAGATT+GGG | + | chr5.1:19306805-19306824 | None:intergenic | 25.0% |
! | TATCAACACACATATATAAC+AGG | + | chr5.1:19308906-19308925 | None:intergenic | 25.0% |
! | TCGATTCAATATTGTATCTT+AGG | - | chr5.1:19307595-19307614 | MS.gene000639:CDS | 25.0% |
! | TGCAAACTTATAATGTTACA+CGG | - | chr5.1:19307863-19307882 | MS.gene000639:CDS | 25.0% |
! | TGTTTATTAGCAATAGGTAA+GGG | - | chr5.1:19306705-19306724 | MS.gene000639:intron | 25.0% |
! | TTAGTTATAACGCTTAAGAT+TGG | + | chr5.1:19306806-19306825 | None:intergenic | 25.0% |
! | TTTATAGATGCAATGAGAAA+GGG | - | chr5.1:19309361-19309380 | MS.gene000639:CDS | 25.0% |
!! | CTTATTGTGAAATTTTGTGT+AGG | - | chr5.1:19310095-19310114 | MS.gene000639:intron | 25.0% |
!! | GAGTATCATTCCAATTTTAT+CGG | - | chr5.1:19308292-19308311 | MS.gene000639:intron | 25.0% |
!! | TATATTTTCCTTATTCCTGA+TGG | + | chr5.1:19309199-19309218 | None:intergenic | 25.0% |
!! | TTGTATTTTATAAAGGACAC+TGG | + | chr5.1:19308023-19308042 | None:intergenic | 25.0% |
!!! | ATTTCGCTTACTTTTCAAAT+TGG | - | chr5.1:19307812-19307831 | MS.gene000639:intron | 25.0% |
!!! | GCCTCTTTTATTTTTATCAA+TGG | + | chr5.1:19309407-19309426 | None:intergenic | 25.0% |
!!! | TAAGGAAAGATTTTTAAAGG+AGG | - | chr5.1:19306675-19306694 | MS.gene000639:intron | 25.0% |
!!! | TTTCGCTTACTTTTCAAATT+GGG | - | chr5.1:19307813-19307832 | MS.gene000639:intron | 25.0% |
!!! | TTTGAATTGTTTTTCCTCTT+TGG | + | chr5.1:19308523-19308542 | None:intergenic | 25.0% |
AAAGAAGCCTGGAATAAATT+GGG | - | chr5.1:19306148-19306167 | MS.gene000639:CDS | 30.0% | |
AAGAGAAATTCTATGGTTCA+AGG | - | chr5.1:19309618-19309637 | MS.gene000639:intron | 30.0% | |
AATATATTCCACATCCTCTA+TGG | - | chr5.1:19307136-19307155 | MS.gene000639:CDS | 30.0% | |
AATTGTATCCATCAGGAATA+AGG | - | chr5.1:19309188-19309207 | MS.gene000639:CDS | 30.0% | |
AATTGTGAAGAAATTGGTGA+AGG | - | chr5.1:19307202-19307221 | MS.gene000639:CDS | 30.0% | |
ACCATTGCGATAATTATCAT+CGG | + | chr5.1:19307477-19307496 | None:intergenic | 30.0% | |
AGACCAACTTTACAAAATTG+AGG | - | chr5.1:19308270-19308289 | MS.gene000639:intron | 30.0% | |
AGATGCAAAGAGAAATTCTA+TGG | - | chr5.1:19309611-19309630 | MS.gene000639:intron | 30.0% | |
AGTTATAACGCTTAAGATTG+GGG | + | chr5.1:19306804-19306823 | None:intergenic | 30.0% | |
ATACATGATGCAACTGTAAA+TGG | - | chr5.1:19309475-19309494 | MS.gene000639:CDS | 30.0% | |
ATATATTCCACATCCTCTAT+GGG | - | chr5.1:19307137-19307156 | MS.gene000639:CDS | 30.0% | |
ATATTAGGGTCCAATTAGTA+AGG | - | chr5.1:19306948-19306967 | MS.gene000639:CDS | 30.0% | |
ATCATGTATGAGTTCGAAAA+CGG | + | chr5.1:19309464-19309483 | None:intergenic | 30.0% | |
ATGCAAACTCGTTTATTAAG+AGG | - | chr5.1:19307102-19307121 | MS.gene000639:CDS | 30.0% | |
CATATCATTCAACTAACATG+TGG | - | chr5.1:19306085-19306104 | MS.gene000639:CDS | 30.0% | |
CCAAAGAATTCAAGAGTTTA+AGG | - | chr5.1:19309270-19309289 | MS.gene000639:CDS | 30.0% | |
CCTTAAACTCTTGAATTCTT+TGG | + | chr5.1:19309273-19309292 | None:intergenic | 30.0% | |
CTAAGACTGAATATGAGATT+TGG | - | chr5.1:19306038-19306057 | MS.gene000639:CDS | 30.0% | |
CTAATATGAGTAAGATTCTC+TGG | + | chr5.1:19306112-19306131 | None:intergenic | 30.0% | |
CTTGTTAGAAACTATCTTGT+GGG | - | chr5.1:19305965-19305984 | MS.gene000639:CDS | 30.0% | |
GGAGATGTTAAATTAAGTGT+TGG | + | chr5.1:19308055-19308074 | None:intergenic | 30.0% | |
GGTAATCTCAAAACTAAAAG+CGG | + | chr5.1:19308447-19308466 | None:intergenic | 30.0% | |
GTTTATAGATGCAATGAGAA+AGG | - | chr5.1:19309360-19309379 | MS.gene000639:CDS | 30.0% | |
TAAAGAAGCCTGGAATAAAT+TGG | - | chr5.1:19306147-19306166 | MS.gene000639:CDS | 30.0% | |
TACATGATCTGTTTGGAAAT+TGG | - | chr5.1:19308154-19308173 | MS.gene000639:intron | 30.0% | |
TATATACCTTGCTCAATATC+TGG | + | chr5.1:19306205-19306224 | None:intergenic | 30.0% | |
TCAATATTGTATCTTAGGTG+TGG | - | chr5.1:19307600-19307619 | MS.gene000639:CDS | 30.0% | |
TCAATATTTCAAGAGCTACA+CGG | + | chr5.1:19309240-19309259 | None:intergenic | 30.0% | |
TCTTGTTAGAAACTATCTTG+TGG | - | chr5.1:19305964-19305983 | MS.gene000639:CDS | 30.0% | |
TGAGATGTTACAAATGGTAT+TGG | - | chr5.1:19306613-19306632 | MS.gene000639:intron | 30.0% | |
TGCAAACTCGTTTATTAAGA+GGG | - | chr5.1:19307103-19307122 | MS.gene000639:CDS | 30.0% | |
TGTATCACTGCAGAAATATT+TGG | - | chr5.1:19307515-19307534 | MS.gene000639:intron | 30.0% | |
TTATCTATGAAGACCAATGA+TGG | - | chr5.1:19307365-19307384 | MS.gene000639:intron | 30.0% | |
TTTCACAATAAGTTATAGCG+CGG | + | chr5.1:19310087-19310106 | None:intergenic | 30.0% | |
! | ACTCCTCAATTTTGTAAAGT+TGG | + | chr5.1:19308276-19308295 | None:intergenic | 30.0% |
! | AGAGTTTTACATGATCTGTT+TGG | - | chr5.1:19308147-19308166 | MS.gene000639:intron | 30.0% |
! | AGTGAAGTTTGATGAGTTTT+TGG | + | chr5.1:19308227-19308246 | None:intergenic | 30.0% |
! | GTTTTTCTACAATATGCGAA+TGG | - | chr5.1:19308615-19308634 | MS.gene000639:intron | 30.0% |
! | TCACATGTCATTTCAGAATT+CGG | - | chr5.1:19308979-19308998 | MS.gene000639:intron | 30.0% |
! | TCTTTTCACTTCTTCAACTT+CGG | - | chr5.1:19310398-19310417 | MS.gene000639:intron | 30.0% |
! | TTATTCCTGATGGATACAAT+TGG | + | chr5.1:19309189-19309208 | None:intergenic | 30.0% |
!! | AAGCTCTAGAAAGAAGAATT+AGG | + | chr5.1:19308576-19308595 | None:intergenic | 30.0% |
!! | ACATACATGCTTTAATTTGC+AGG | - | chr5.1:19307011-19307030 | MS.gene000639:CDS | 30.0% |
!! | AGAGAAGTGCATGAATTTTA+CGG | - | chr5.1:19308471-19308490 | MS.gene000639:intron | 30.0% |
!!! | ATTTTTTGCTTCCTTACACT+TGG | + | chr5.1:19310142-19310161 | None:intergenic | 30.0% |
!!! | TTTTTTGCTTCCTTACACTT+GGG | + | chr5.1:19310141-19310160 | None:intergenic | 30.0% |
AAAGATCACAGATCACAACA+AGG | + | chr5.1:19308808-19308827 | None:intergenic | 35.0% | |
AAGAACAATCAACGGCATTT+AGG | - | chr5.1:19306824-19306843 | MS.gene000639:intron | 35.0% | |
AAGATCACAGATCACAACAA+GGG | + | chr5.1:19308807-19308826 | None:intergenic | 35.0% | |
AATTCATGCACTTCTCTTTC+AGG | + | chr5.1:19308468-19308487 | None:intergenic | 35.0% | |
ACTTGAAAATCTCAAGGAAG+AGG | + | chr5.1:19310656-19310675 | None:intergenic | 35.0% | |
AGAAACCACAGAGAAGAAAA+GGG | + | chr5.1:19310514-19310533 | None:intergenic | 35.0% | |
ATGATGCAACTGTAAATGGA+CGG | - | chr5.1:19309479-19309498 | MS.gene000639:CDS | 35.0% | |
ATTAAGTCCTGTCTCATAGT+CGG | + | chr5.1:19306368-19306387 | None:intergenic | 35.0% | |
CAATTCAAAGCTTCTTTCGT+AGG | - | chr5.1:19308534-19308553 | MS.gene000639:intron | 35.0% | |
CCACAAATCACACTTTGAAT+CGG | - | chr5.1:19307663-19307682 | MS.gene000639:intron | 35.0% | |
CGAGGAAATTGTGAAGAAAT+TGG | - | chr5.1:19307196-19307215 | MS.gene000639:CDS | 35.0% | |
CTGTAGACTTGAAAATCTCA+AGG | + | chr5.1:19310662-19310681 | None:intergenic | 35.0% | |
CTTTCTGTAAATAACTCACG+AGG | + | chr5.1:19310180-19310199 | None:intergenic | 35.0% | |
GCTTATATGTTGGAACAAAG+AGG | - | chr5.1:19309697-19309716 | MS.gene000639:intron | 35.0% | |
GTGAAAATGAAAGACAATCG+AGG | - | chr5.1:19307242-19307261 | MS.gene000639:CDS | 35.0% | |
GTTATTTACAGAAAGCCACA+AGG | - | chr5.1:19310185-19310204 | MS.gene000639:intron | 35.0% | |
TAAGAAAATATCACGGTCAG+AGG | - | chr5.1:19307337-19307356 | MS.gene000639:CDS | 35.0% | |
TAAGGAATCAGAACTTAGAG+AGG | - | chr5.1:19309288-19309307 | MS.gene000639:CDS | 35.0% | |
TAATTAATCACAAAGAGGGG+AGG | + | chr5.1:19309145-19309164 | None:intergenic | 35.0% | |
TAGAAACCACAGAGAAGAAA+AGG | + | chr5.1:19310515-19310534 | None:intergenic | 35.0% | |
TATAGCGAAGTGTATGACTA+TGG | - | chr5.1:19307310-19307329 | MS.gene000639:CDS | 35.0% | |
TATAGCGCGGTTAAAATTCA+TGG | + | chr5.1:19310074-19310093 | None:intergenic | 35.0% | |
TATATTCCACATCCTCTATG+GGG | - | chr5.1:19307138-19307157 | MS.gene000639:CDS | 35.0% | |
TCGGTACTATTAAAGTTCTC+TGG | - | chr5.1:19308998-19309017 | MS.gene000639:intron | 35.0% | |
TCTCTTCATTGGAATCCTAA+CGG | - | chr5.1:19310425-19310444 | MS.gene000639:CDS | 35.0% | |
TCTTGCAAATATTGCCAAAG+AGG | - | chr5.1:19308506-19308525 | MS.gene000639:intron | 35.0% | |
TGAAGAAATTGGTGAAGGAA+GGG | - | chr5.1:19307207-19307226 | MS.gene000639:CDS | 35.0% | |
TGAGAAGAGATTAGGAGTTT+AGG | - | chr5.1:19309757-19309776 | MS.gene000639:intron | 35.0% | |
TGTGCAGCGATTTATATTGA+AGG | + | chr5.1:19307055-19307074 | None:intergenic | 35.0% | |
TTAGGATTCCAATGAAGAGA+AGG | + | chr5.1:19310425-19310444 | None:intergenic | 35.0% | |
TTCATATTGCTAAAGAAGCC+TGG | - | chr5.1:19306137-19306156 | MS.gene000639:CDS | 35.0% | |
! | AGATTTGGAACAGGAAGAAT+GGG | - | chr5.1:19306053-19306072 | MS.gene000639:CDS | 35.0% |
! | CGATTCAAAGTGTGATTTGT+GGG | + | chr5.1:19307665-19307684 | None:intergenic | 35.0% |
! | CTGAATATGAGATTTGGAAC+AGG | - | chr5.1:19306044-19306063 | MS.gene000639:CDS | 35.0% |
! | CTTTTCAAATTGGGTCATCT+CGG | - | chr5.1:19307822-19307841 | MS.gene000639:intron | 35.0% |
! | GTTTCTTTAGGAAGGTTATG+TGG | - | chr5.1:19308668-19308687 | MS.gene000639:intron | 35.0% |
! | TAAGTGTCTTTTGTGAGTCA+TGG | - | chr5.1:19306336-19306355 | MS.gene000639:CDS | 35.0% |
! | TTTTATCAATGGCCCATAAG+AGG | + | chr5.1:19309396-19309415 | None:intergenic | 35.0% |
! | TTTTTGCTTCCTTACACTTG+GGG | + | chr5.1:19310140-19310159 | None:intergenic | 35.0% |
!! | ATCTTCTCGGTTGTTTCTTT+AGG | - | chr5.1:19308656-19308675 | MS.gene000639:intron | 35.0% |
!! | CATTGGTCTTCATAGATAAC+AGG | + | chr5.1:19307364-19307383 | None:intergenic | 35.0% |
!! | GAGAAGTGCATGAATTTTAC+GGG | - | chr5.1:19308472-19308491 | MS.gene000639:intron | 35.0% |
!! | TCACTTGCTATGCTCTTAAA+GGG | - | chr5.1:19310555-19310574 | MS.gene000639:CDS | 35.0% |
!! | TTCACTTGCTATGCTCTTAA+AGG | - | chr5.1:19310554-19310573 | MS.gene000639:CDS | 35.0% |
AAATGGGCAAAAGATACAGC+TGG | - | chr5.1:19310228-19310247 | MS.gene000639:intron | 40.0% | |
AACAGGGATTTCACCATCAT+TGG | + | chr5.1:19307381-19307400 | None:intergenic | 40.0% | |
AATCAACGGCATTTAGGCTT+TGG | - | chr5.1:19306830-19306849 | MS.gene000639:intron | 40.0% | |
AATTGCCAAATGCGTCTACA+CGG | + | chr5.1:19309522-19309541 | None:intergenic | 40.0% | |
ACCTTAGTGGCAATGACTTA+AGG | + | chr5.1:19310473-19310492 | None:intergenic | 40.0% | |
ACCTTGCTCAATATCTGGAT+CGG | + | chr5.1:19306200-19306219 | None:intergenic | 40.0% | |
AGAAACTATCTTGTGGGACA+TGG | - | chr5.1:19305971-19305990 | MS.gene000639:CDS | 40.0% | |
AGTGCGAAAAGTAACCTTAG+TGG | + | chr5.1:19310486-19310505 | None:intergenic | 40.0% | |
AGTTGCACCCAATTTATTCC+AGG | + | chr5.1:19306158-19306177 | None:intergenic | 40.0% | |
ATCAACGGCATTTAGGCTTT+GGG | - | chr5.1:19306831-19306850 | MS.gene000639:intron | 40.0% | |
ATCAGAACTTAGAGAGGCTT+CGG | - | chr5.1:19309294-19309313 | MS.gene000639:CDS | 40.0% | |
CAAAGCTTCTTTCGTAGGTA+TGG | - | chr5.1:19308539-19308558 | MS.gene000639:intron | 40.0% | |
CACACATATATAACAGGGAC+TGG | + | chr5.1:19308900-19308919 | None:intergenic | 40.0% | |
CATGCATGCAGCTTATATGT+TGG | - | chr5.1:19309687-19309706 | MS.gene000639:intron | 40.0% | |
CCAAAGACAACTACGAAAAC+TGG | - | chr5.1:19305936-19305955 | MS.gene000639:CDS | 40.0% | |
CCGATTCAAAGTGTGATTTG+TGG | + | chr5.1:19307666-19307685 | None:intergenic | 40.0% | |
CTGCACAAGTATATTGAGAG+CGG | - | chr5.1:19307068-19307087 | MS.gene000639:CDS | 40.0% | |
CTTCGCTATATTCGTGTTTC+CGG | + | chr5.1:19307300-19307319 | None:intergenic | 40.0% | |
GAGAGAACTGAGAAGAGATT+AGG | - | chr5.1:19309749-19309768 | MS.gene000639:intron | 40.0% | |
GCCGATGATAATTATCGCAA+TGG | - | chr5.1:19307473-19307492 | MS.gene000639:intron | 40.0% | |
GCTTTGTATTCACACCCTTA+GGG | + | chr5.1:19308878-19308897 | None:intergenic | 40.0% | |
GGTGGAAACAATCAAGACAA+TGG | - | chr5.1:19310315-19310334 | MS.gene000639:intron | 40.0% | |
GTGAAGAAATTGGTGAAGGA+AGG | - | chr5.1:19307206-19307225 | MS.gene000639:CDS | 40.0% | |
GTGACCTCTATTCCTGAAAT+TGG | - | chr5.1:19306007-19306026 | MS.gene000639:CDS | 40.0% | |
TAGAACGATAACAGGAACAC+TGG | + | chr5.1:19310616-19310635 | None:intergenic | 40.0% | |
TAGGTAAGGGAGAAGCAATA+AGG | - | chr5.1:19306718-19306737 | MS.gene000639:intron | 40.0% | |
TATTTCAAGAGCTACACGGT+AGG | + | chr5.1:19309236-19309255 | None:intergenic | 40.0% | |
TCCTTAAGTCATTGCCACTA+AGG | - | chr5.1:19310469-19310488 | MS.gene000639:CDS | 40.0% | |
TCTGATCTTGATCGTAGATC+CGG | - | chr5.1:19309577-19309596 | MS.gene000639:intron | 40.0% | |
TGCACTTGGCAGGATATTTA+GGG | - | chr5.1:19309548-19309567 | MS.gene000639:intron | 40.0% | |
TGTCTTGATTGTTTCCACCA+GGG | + | chr5.1:19310314-19310333 | None:intergenic | 40.0% | |
TGTGCAACCATTATACGCAT+TGG | - | chr5.1:19307690-19307709 | MS.gene000639:intron | 40.0% | |
TTACTCCTCAATTGTCCCTT+CGG | + | chr5.1:19308324-19308343 | None:intergenic | 40.0% | |
TTGCACTTGGCAGGATATTT+AGG | - | chr5.1:19309547-19309566 | MS.gene000639:intron | 40.0% | |
TTGTCTTGATTGTTTCCACC+AGG | + | chr5.1:19310315-19310334 | None:intergenic | 40.0% | |
! | AAATTTTGTGTAGGCAGTGG+AGG | - | chr5.1:19310104-19310123 | MS.gene000639:intron | 40.0% |
! | AGCTGGTTCATTTACTCTTG+TGG | - | chr5.1:19310245-19310264 | MS.gene000639:intron | 40.0% |
! | CCAGTTTTCGTAGTTGTCTT+TGG | + | chr5.1:19305939-19305958 | None:intergenic | 40.0% |
! | CTGCAGAAATATTTGGTTCG+TGG | - | chr5.1:19307522-19307541 | MS.gene000639:intron | 40.0% |
! | CTTTAGGAAGGTTATGTGGA+CGG | - | chr5.1:19308672-19308691 | MS.gene000639:intron | 40.0% |
! | GAGATTTGGAACAGGAAGAA+TGG | - | chr5.1:19306052-19306071 | MS.gene000639:CDS | 40.0% |
! | GTGAAATTTTGTGTAGGCAG+TGG | - | chr5.1:19310101-19310120 | MS.gene000639:intron | 40.0% |
! | GTTCGAAAACGGCTTTTCTA+CGG | + | chr5.1:19309453-19309472 | None:intergenic | 40.0% |
! | TCCTGATGGATACAATTGGA+GGG | + | chr5.1:19309185-19309204 | None:intergenic | 40.0% |
! | TTCCTGATGGATACAATTGG+AGG | + | chr5.1:19309186-19309205 | None:intergenic | 40.0% |
!! | AAAAGAATCGTGTTGACTCG+TGG | - | chr5.1:19306562-19306581 | MS.gene000639:intron | 40.0% |
!! | AAAGAATCGTGTTGACTCGT+GGG | - | chr5.1:19306563-19306582 | MS.gene000639:intron | 40.0% |
!! | AAGCGGAAGTTGATTAGTCT+TGG | + | chr5.1:19308430-19308449 | None:intergenic | 40.0% |
!! | CATGCTTTAATTTGCAGGTG+TGG | - | chr5.1:19307016-19307035 | MS.gene000639:CDS | 40.0% |
!! | TCTCGGTTGTTTCTTTAGGA+AGG | - | chr5.1:19308660-19308679 | MS.gene000639:intron | 40.0% |
!! | TTCCAAGTGGTAGTGGATAT+GGG | - | chr5.1:19307731-19307750 | MS.gene000639:intron | 40.0% |
!! | TTTCCAAGTGGTAGTGGATA+TGG | - | chr5.1:19307730-19307749 | MS.gene000639:intron | 40.0% |
AAACCACATCATCTTGGGAG+AGG | + | chr5.1:19306642-19306661 | None:intergenic | 45.0% | |
AAACCTCTCCCAAGATGATG+TGG | - | chr5.1:19306636-19306655 | MS.gene000639:intron | 45.0% | |
AAATGCCGTGTAGACGCATT+TGG | - | chr5.1:19309514-19309533 | MS.gene000639:CDS | 45.0% | |
AACCCATATCCACTACCACT+TGG | + | chr5.1:19307736-19307755 | None:intergenic | 45.0% | |
AACTACCGCAACGTGAAGAA+CGG | + | chr5.1:19307168-19307187 | None:intergenic | 45.0% | |
AATTCCATGTTGCACTTGGC+AGG | - | chr5.1:19309538-19309557 | MS.gene000639:intron | 45.0% | |
AATTGTGCACCCCAAGTGTA+AGG | - | chr5.1:19310128-19310147 | MS.gene000639:intron | 45.0% | |
ACAAGGAGCTAGTGAAAGCT+GGG | - | chr5.1:19310202-19310221 | MS.gene000639:intron | 45.0% | |
ACTTCGGTCCTTCTCTTCAT+TGG | - | chr5.1:19310414-19310433 | MS.gene000639:CDS | 45.0% | |
AGGGTAATCCTGACCTCTTA+TGG | - | chr5.1:19309380-19309399 | MS.gene000639:CDS | 45.0% | |
AGTATATTGAGAGCGGTGAG+TGG | - | chr5.1:19307075-19307094 | MS.gene000639:CDS | 45.0% | |
AGTGAAAGCTGGGGAGAAAT+GGG | - | chr5.1:19310212-19310231 | MS.gene000639:intron | 45.0% | |
ATATCCTGCCAAGTGCAACA+TGG | + | chr5.1:19309545-19309564 | None:intergenic | 45.0% | |
ATGCCTTCTGTGTTTCCAAG+TGG | - | chr5.1:19307718-19307737 | MS.gene000639:intron | 45.0% | |
ATGCGTGCCAATGCGTATAA+TGG | + | chr5.1:19307700-19307719 | None:intergenic | 45.0% | |
ATGTTGCAAGCAGCAAAGCA+TGG | - | chr5.1:19309328-19309347 | MS.gene000639:CDS | 45.0% | |
CATAGCAAGTGAAGCACAGA+AGG | + | chr5.1:19310547-19310566 | None:intergenic | 45.0% | |
CATGTATGTATGCGAGTGAG+TGG | + | chr5.1:19309671-19309690 | None:intergenic | 45.0% | |
CCTTGTAATCCAGACCCTAA+GGG | - | chr5.1:19308861-19308880 | MS.gene000639:CDS | 45.0% | |
CGCACCAATTTCAGGAATAG+AGG | + | chr5.1:19306014-19306033 | None:intergenic | 45.0% | |
CTACCACTTGGAAACACAGA+AGG | + | chr5.1:19307724-19307743 | None:intergenic | 45.0% | |
CTACGATCAAGATCAGAGGA+AGG | + | chr5.1:19309574-19309593 | None:intergenic | 45.0% | |
CTCCCAAGATGATGTGGTTT+GGG | - | chr5.1:19306642-19306661 | MS.gene000639:intron | 45.0% | |
GACGGAACTAGAACGATAAC+AGG | + | chr5.1:19310624-19310643 | None:intergenic | 45.0% | |
GACTAAACCGACTATGAGAC+AGG | - | chr5.1:19306358-19306377 | MS.gene000639:CDS | 45.0% | |
GGATCTACGATCAAGATCAG+AGG | + | chr5.1:19309578-19309597 | None:intergenic | 45.0% | |
GGGTAATCCTGACCTCTTAT+GGG | - | chr5.1:19309381-19309400 | MS.gene000639:CDS | 45.0% | |
GTGATGTCGTGCAAGAACAA+GGG | + | chr5.1:19310345-19310364 | None:intergenic | 45.0% | |
GTTCTTCTTGCTGCTGCTAA+GGG | - | chr5.1:19307398-19307417 | MS.gene000639:intron | 45.0% | |
TACTCCTCAATTGTCCCTTC+GGG | + | chr5.1:19308323-19308342 | None:intergenic | 45.0% | |
TAGCAGCAGCAAGAAGAACA+GGG | + | chr5.1:19307397-19307416 | None:intergenic | 45.0% | |
TAGTGAAAGCTGGGGAGAAA+TGG | - | chr5.1:19310211-19310230 | MS.gene000639:intron | 45.0% | |
TCCCAAGATGATGTGGTTTG+GGG | - | chr5.1:19306643-19306662 | MS.gene000639:intron | 45.0% | |
TCCCCAAACCACATCATCTT+GGG | + | chr5.1:19306647-19306666 | None:intergenic | 45.0% | |
TCCCTCCAATTGTATCCATC+AGG | - | chr5.1:19309181-19309200 | MS.gene000639:CDS | 45.0% | |
TCGGGGACATCCGATAAAAT+TGG | + | chr5.1:19308305-19308324 | None:intergenic | 45.0% | |
TCGTAGTTGTCTTTGGTCAG+TGG | + | chr5.1:19305932-19305951 | None:intergenic | 45.0% | |
TCTCCCAAGATGATGTGGTT+TGG | - | chr5.1:19306641-19306660 | MS.gene000639:intron | 45.0% | |
TCTCTTTGCATCTGCATAGC+AGG | + | chr5.1:19309604-19309623 | None:intergenic | 45.0% | |
TCTGGATTACAAGGCGTATC+CGG | + | chr5.1:19308855-19308874 | None:intergenic | 45.0% | |
TCTGTGTTTCCAAGTGGTAG+TGG | - | chr5.1:19307724-19307743 | MS.gene000639:intron | 45.0% | |
TCTTTACCGTTGTACACCGT+TGG | - | chr5.1:19307442-19307461 | MS.gene000639:intron | 45.0% | |
TGCAACTGTAAATGGACGGA+AGG | - | chr5.1:19309483-19309502 | MS.gene000639:CDS | 45.0% | |
TGCGATAATTATCATCGGCC+AGG | + | chr5.1:19307472-19307491 | None:intergenic | 45.0% | |
TGGCAATTCCATGTTGCACT+TGG | - | chr5.1:19309534-19309553 | MS.gene000639:intron | 45.0% | |
TGTGATGTCGTGCAAGAACA+AGG | + | chr5.1:19310346-19310365 | None:intergenic | 45.0% | |
TGTTCTTCTTGCTGCTGCTA+AGG | - | chr5.1:19307397-19307416 | MS.gene000639:intron | 45.0% | |
TGTTGCAAGCAGCAAAGCAT+GGG | - | chr5.1:19309329-19309348 | MS.gene000639:CDS | 45.0% | |
TTAGAACGCGCACCAATTTC+AGG | + | chr5.1:19306022-19306041 | None:intergenic | 45.0% | |
TTAGCAGCAGCAAGAAGAAC+AGG | + | chr5.1:19307398-19307417 | None:intergenic | 45.0% | |
TTATCGCCAGTAAAGCAGCT+GGG | - | chr5.1:19308704-19308723 | MS.gene000639:intron | 45.0% | |
TTGGAACAGGAAGAATGGGA+AGG | - | chr5.1:19306057-19306076 | MS.gene000639:CDS | 45.0% | |
TTTATCGCCAGTAAAGCAGC+TGG | - | chr5.1:19308703-19308722 | MS.gene000639:intron | 45.0% | |
! | AACTTACCCAGCTGCTTTAC+TGG | + | chr5.1:19308713-19308732 | None:intergenic | 45.0% |
! | AAGTGTGATTTGTGGGCAAG+AGG | + | chr5.1:19307658-19307677 | None:intergenic | 45.0% |
! | ATTTTATCGGATGTCCCCGA+AGG | - | chr5.1:19308305-19308324 | MS.gene000639:intron | 45.0% |
! | CATTGCCCTTTTCTTCTCTG+TGG | - | chr5.1:19310506-19310525 | MS.gene000639:CDS | 45.0% |
! | GAGGCATTTGAGGAAATCGT+TGG | + | chr5.1:19307639-19307658 | None:intergenic | 45.0% |
! | GGCTTTGTATTCACACCCTT+AGG | + | chr5.1:19308879-19308898 | None:intergenic | 45.0% |
! | TTTTATCGGATGTCCCCGAA+GGG | - | chr5.1:19308306-19308325 | MS.gene000639:intron | 45.0% |
!! | AAGAATCGTGTTGACTCGTG+GGG | - | chr5.1:19306564-19306583 | MS.gene000639:intron | 45.0% |
!! | GCTTTAATTTGCAGGTGTGG+TGG | - | chr5.1:19307019-19307038 | MS.gene000639:CDS | 45.0% |
ACTCCTCAATTGTCCCTTCG+GGG | + | chr5.1:19308322-19308341 | None:intergenic | 50.0% | |
ATCTTGTGGGACATGGTCTG+AGG | - | chr5.1:19305978-19305997 | MS.gene000639:CDS | 50.0% | |
ATTCCACATCCTCTATGGGG+AGG | - | chr5.1:19307141-19307160 | MS.gene000639:CDS | 50.0% | |
CAAGGAGCTAGTGAAAGCTG+GGG | - | chr5.1:19310203-19310222 | MS.gene000639:intron | 50.0% | |
CACAAGGAGCTAGTGAAAGC+TGG | - | chr5.1:19310201-19310220 | MS.gene000639:intron | 50.0% | |
CAGCTCAGCAACAAGAGCTA+GGG | + | chr5.1:19307276-19307295 | None:intergenic | 50.0% | |
CAGCTTTCACTAGCTCCTTG+TGG | + | chr5.1:19310203-19310222 | None:intergenic | 50.0% | |
CCCTTAGGGTCTGGATTACA+AGG | + | chr5.1:19308864-19308883 | None:intergenic | 50.0% | |
CTCACGAGGCTTCTTATCGT+CGG | + | chr5.1:19310166-19310185 | None:intergenic | 50.0% | |
GCCGATCCAGATATTGAGCA+AGG | - | chr5.1:19306196-19306215 | MS.gene000639:CDS | 50.0% | |
GCCTTGTAATCCAGACCCTA+AGG | - | chr5.1:19308860-19308879 | MS.gene000639:CDS | 50.0% | |
GGTCTTCCAACGGTGTACAA+CGG | + | chr5.1:19307451-19307470 | None:intergenic | 50.0% | |
GGTTTGGGGACGAAGCAATA+AGG | - | chr5.1:19306657-19306676 | MS.gene000639:intron | 50.0% | |
GTATTCACACCCTTAGGGTC+TGG | + | chr5.1:19308873-19308892 | None:intergenic | 50.0% | |
GTCCCCAAACCACATCATCT+TGG | + | chr5.1:19306648-19306667 | None:intergenic | 50.0% | |
TCAATGGCCCATAAGAGGTC+AGG | + | chr5.1:19309391-19309410 | None:intergenic | 50.0% | |
TCACAACAAGGGTTCGCACA+AGG | + | chr5.1:19308796-19308815 | None:intergenic | 50.0% | |
TCAGCTCAGCAACAAGAGCT+AGG | + | chr5.1:19307277-19307296 | None:intergenic | 50.0% | |
TCCGGTGCAAAGCACACAAA+CGG | + | chr5.1:19308837-19308856 | None:intergenic | 50.0% | |
TCCGTTTGTGTGCTTTGCAC+CGG | - | chr5.1:19308833-19308852 | MS.gene000639:CDS | 50.0% | |
TCTTGTGGGACATGGTCTGA+GGG | - | chr5.1:19305979-19305998 | MS.gene000639:CDS | 50.0% | |
TTCACGTTGCGGTAGTTGCT+GGG | - | chr5.1:19307171-19307190 | MS.gene000639:CDS | 50.0% | |
TTGCATCTGCATAGCAGGAC+CGG | + | chr5.1:19309599-19309618 | None:intergenic | 50.0% | |
TTGTACACCGTTGGAAGACC+TGG | - | chr5.1:19307451-19307470 | MS.gene000639:intron | 50.0% | |
TTTCAGCGTAACGAGCCGTT+AGG | + | chr5.1:19310443-19310462 | None:intergenic | 50.0% | |
!! | AACGGCATTTAGGCTTTGGG+TGG | - | chr5.1:19306834-19306853 | MS.gene000639:intron | 50.0% |
!! | AGAATCGTGTTGACTCGTGG+GGG | - | chr5.1:19306565-19306584 | MS.gene000639:intron | 50.0% |
!! | TTGTGGGCAAGAGGCATTTG+AGG | + | chr5.1:19307649-19307668 | None:intergenic | 50.0% |
AAGAACGGTCCTCCCCATAG+AGG | + | chr5.1:19307153-19307172 | None:intergenic | 55.0% | |
CTTCACGTTGCGGTAGTTGC+TGG | - | chr5.1:19307170-19307189 | MS.gene000639:CDS | 55.0% | |
CTTGTGGGACATGGTCTGAG+GGG | - | chr5.1:19305980-19305999 | MS.gene000639:CDS | 55.0% | |
GAGGACCGTTCTTCACGTTG+CGG | - | chr5.1:19307160-19307179 | MS.gene000639:CDS | 55.0% | |
GCTCTTGTTGCTGAGCTGAC+CGG | - | chr5.1:19307278-19307297 | MS.gene000639:CDS | 55.0% | |
TCATCGGCCAGGTCTTCCAA+CGG | + | chr5.1:19307461-19307480 | None:intergenic | 55.0% | |
TGTCCCCGAAGGGACAATTG+AGG | - | chr5.1:19308316-19308335 | MS.gene000639:intron | 55.0% | |
! | AGGAAGAGGCGCAACTGTGA+CGG | + | chr5.1:19310642-19310661 | None:intergenic | 55.0% |
! | GGAACAAGCATTGCAGCGAG+TGG | - | chr5.1:19305893-19305912 | MS.gene000639:CDS | 55.0% |
GCAGCTTTCACTGTCCCTGG+TGG | - | chr5.1:19310297-19310316 | MS.gene000639:intron | 60.0% | |
GCTGCAGCTTTCACTGTCCC+TGG | - | chr5.1:19310294-19310313 | MS.gene000639:intron | 60.0% | |
GGTCCTCCCCATAGAGGATG+TGG | + | chr5.1:19307147-19307166 | None:intergenic | 60.0% | |
TGCGGTAGTTGCTGGGCACG+AGG | - | chr5.1:19307178-19307197 | MS.gene000639:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.1 | gene | 19305887 | 19310695 | 19305887 | ID=MS.gene000639 |
chr5.1 | mRNA | 19305887 | 19310695 | 19305887 | ID=MS.gene000639.t1;Parent=MS.gene000639 |
chr5.1 | exon | 19310413 | 19310695 | 19310413 | ID=MS.gene000639.t1.exon1;Parent=MS.gene000639.t1 |
chr5.1 | CDS | 19310413 | 19310695 | 19310413 | ID=cds.MS.gene000639.t1;Parent=MS.gene000639.t1 |
chr5.1 | exon | 19309046 | 19309549 | 19309046 | ID=MS.gene000639.t1.exon2;Parent=MS.gene000639.t1 |
chr5.1 | CDS | 19309046 | 19309549 | 19309046 | ID=cds.MS.gene000639.t1;Parent=MS.gene000639.t1 |
chr5.1 | exon | 19308804 | 19308965 | 19308804 | ID=MS.gene000639.t1.exon3;Parent=MS.gene000639.t1 |
chr5.1 | CDS | 19308804 | 19308965 | 19308804 | ID=cds.MS.gene000639.t1;Parent=MS.gene000639.t1 |
chr5.1 | exon | 19308027 | 19308128 | 19308027 | ID=MS.gene000639.t1.exon4;Parent=MS.gene000639.t1 |
chr5.1 | CDS | 19308027 | 19308128 | 19308027 | ID=cds.MS.gene000639.t1;Parent=MS.gene000639.t1 |
chr5.1 | exon | 19307857 | 19307904 | 19307857 | ID=MS.gene000639.t1.exon5;Parent=MS.gene000639.t1 |
chr5.1 | CDS | 19307857 | 19307904 | 19307857 | ID=cds.MS.gene000639.t1;Parent=MS.gene000639.t1 |
chr5.1 | exon | 19307563 | 19307622 | 19307563 | ID=MS.gene000639.t1.exon6;Parent=MS.gene000639.t1 |
chr5.1 | CDS | 19307563 | 19307622 | 19307563 | ID=cds.MS.gene000639.t1;Parent=MS.gene000639.t1 |
chr5.1 | exon | 19306943 | 19307379 | 19306943 | ID=MS.gene000639.t1.exon7;Parent=MS.gene000639.t1 |
chr5.1 | CDS | 19306943 | 19307379 | 19306943 | ID=cds.MS.gene000639.t1;Parent=MS.gene000639.t1 |
chr5.1 | exon | 19305887 | 19306465 | 19305887 | ID=MS.gene000639.t1.exon8;Parent=MS.gene000639.t1 |
chr5.1 | CDS | 19305887 | 19306465 | 19305887 | ID=cds.MS.gene000639.t1;Parent=MS.gene000639.t1 |
Gene Sequence |
Protein sequence |