AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene000642

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene000642.t1 MTR_5g028450 84.211 304 47 1 555 858 1 303 4.73e-175 507
MS.gene000642.t1 MTR_5g028510 74.603 315 71 3 93 403 18 327 9.61e-159 467
MS.gene000642.t1 MTR_5g028190 60.541 370 134 5 483 849 171 531 1.60e-142 432
MS.gene000642.t1 MTR_5g028190 48.879 223 82 5 191 406 3 200 2.68e-50 186
MS.gene000642.t1 MTR_5g028130 58.651 341 130 4 514 849 1 335 4.04e-129 390
MS.gene000642.t1 MTR_5g028930 55.848 342 149 2 515 855 281 621 8.76e-121 379
MS.gene000642.t1 MTR_5g028930 47.022 319 140 8 114 425 2 298 5.92e-65 229
MS.gene000642.t1 MTR_5g028690 59.420 207 83 1 652 857 36 242 9.93e-76 247
MS.gene000642.t1 MTR_5g028110 57.592 191 59 2 659 849 4 172 3.94e-62 207
MS.gene000642.t1 MTR_6g017215 56.250 192 80 2 653 844 2 189 6.80e-60 204
MS.gene000642.t1 MTR_5g028830 44.521 292 108 8 374 656 42 288 1.41e-59 205
MS.gene000642.t1 MTR_2g438740 39.249 293 174 3 558 850 279 567 6.09e-58 209
MS.gene000642.t1 MTR_5g091220 37.609 343 203 5 513 852 270 604 1.09e-56 206
MS.gene000642.t1 MTR_3g055310 35.826 321 197 7 513 831 14 327 2.15e-54 192
MS.gene000642.t1 MTR_3g055310 35.826 321 197 7 513 831 77 390 8.56e-54 192
MS.gene000642.t1 MTR_3g055310 35.826 321 197 7 513 831 129 442 3.43e-53 192
MS.gene000642.t1 MTR_3g055310 35.826 321 197 7 513 831 157 470 6.30e-53 192
MS.gene000642.t1 MTR_3g055310 35.826 321 197 7 513 831 155 468 8.26e-53 192
MS.gene000642.t1 MTR_3g055310 35.826 321 197 7 513 831 182 495 1.44e-52 192
MS.gene000642.t1 MTR_2g438440 37.075 294 178 5 558 850 399 686 4.58e-50 188
MS.gene000642.t1 MTR_2g438720 36.824 296 183 3 555 850 401 692 5.00e-50 188
MS.gene000642.t1 MTR_2g438700 36.860 293 181 3 558 850 402 690 1.54e-48 184
MS.gene000642.t1 MTR_2g438400 36.824 296 180 5 558 851 258 548 1.58e-48 181
MS.gene000642.t1 MTR_2g438760 35.811 296 177 4 562 856 277 560 2.97e-48 181
MS.gene000642.t1 MTR_3g455790 34.783 322 201 7 513 832 265 579 2.14e-47 179
MS.gene000642.t1 MTR_5g028900 53.012 166 65 3 658 822 3 156 2.14e-46 163
MS.gene000642.t1 MTR_5g028840 45.050 202 110 1 657 857 2 203 2.29e-46 165
MS.gene000642.t1 MTR_2g438640 35.354 297 185 4 555 850 401 691 4.35e-42 165
MS.gene000642.t1 MTR_2g020510 33.654 312 187 5 555 858 390 689 9.35e-42 163
MS.gene000642.t1 MTR_3g452020 32.288 319 207 7 515 831 92 403 2.43e-40 154
MS.gene000642.t1 MTR_3g452020 32.288 319 207 7 515 831 268 579 2.77e-39 155
MS.gene000642.t1 MTR_2g438640 34.007 297 163 4 555 850 401 665 1.23e-37 151
MS.gene000642.t1 MTR_2g020450 34.185 313 183 7 555 858 393 691 9.57e-37 148
MS.gene000642.t1 MTR_2g020470 34.426 244 141 4 623 858 439 671 1.14e-35 145
MS.gene000642.t1 MTR_5g028920 45.665 173 84 3 487 659 65 227 7.41e-35 134
MS.gene000642.t1 MTR_3g058570 31.270 307 187 5 554 848 83 377 7.31e-34 135
MS.gene000642.t1 MTR_3g050500 33.077 260 164 5 556 809 429 684 9.85e-34 139
MS.gene000642.t1 MTR_5g085360 23.358 822 435 29 129 857 18 737 1.17e-32 136
MS.gene000642.t1 MTR_2g017930 35.849 265 159 4 548 810 352 607 1.66e-32 135
MS.gene000642.t1 MTR_5g085350 30.952 294 196 5 556 846 425 714 1.06e-30 129
MS.gene000642.t1 MTR_5g085350 30.952 294 196 5 556 846 438 727 1.24e-30 129
MS.gene000642.t1 MTR_5g085340 29.866 298 200 5 556 848 444 737 1.25e-28 123
MS.gene000642.t1 MTR_3g051060 29.126 309 208 7 556 858 435 738 2.96e-28 122
MS.gene000642.t1 MTR_2g438640 37.949 195 115 3 657 850 399 588 4.60e-27 117
MS.gene000642.t1 MTR_1g113820 33.333 219 131 6 554 766 275 484 2.13e-23 106
MS.gene000642.t1 MTR_2g438470 41.791 134 76 2 600 733 366 497 1.78e-21 99.4
MS.gene000642.t1 MTR_1g113760 26.990 289 188 11 554 831 239 515 5.65e-17 85.5
MS.gene000642.t1 MTR_1g113730 26.761 213 153 3 554 766 45 254 2.84e-14 75.9
MS.gene000642.t1 MTR_6g016185 28.372 215 129 8 567 779 6 197 5.92e-13 68.9
MS.gene000642.t1 MTR_2g438580 40.789 76 44 1 671 746 2 76 2.51e-12 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene000642.t1 AT3G18670 44.379 338 182 6 514 850 252 584 8.18e-81 272
MS.gene000642.t1 AT3G18670 27.542 236 122 7 177 397 53 254 1.01e-16 85.1
MS.gene000642.t1 AT3G18670 44.379 338 182 6 514 850 307 639 4.58e-80 272
MS.gene000642.t1 AT3G18670 27.823 248 130 7 177 409 53 266 4.75e-20 95.9
MS.gene000642.t1 AT5G04700 38.304 342 200 7 513 850 322 656 1.31e-62 224
MS.gene000642.t1 AT5G04690 36.963 349 205 8 506 850 275 612 2.82e-61 219
MS.gene000642.t1 AT5G35810 41.026 273 151 2 546 808 21 293 3.57e-61 211
MS.gene000642.t1 AT5G04690 36.963 349 205 8 506 850 295 632 5.94e-61 219
MS.gene000642.t1 AT5G04730 37.752 347 204 6 509 850 250 589 8.66e-61 217
MS.gene000642.t1 AT5G04690 36.963 349 205 8 506 850 309 646 1.13e-60 218
MS.gene000642.t1 AT5G04680 36.080 352 202 9 513 850 186 528 6.36e-56 202
MS.gene000642.t1 AT5G04680 36.080 352 202 9 513 850 295 637 1.85e-55 203
MS.gene000642.t1 AT5G04680 36.080 352 202 9 513 850 309 651 2.61e-55 203
MS.gene000642.t1 AT5G04680 36.080 352 202 9 513 850 338 680 5.22e-55 203
MS.gene000642.t1 AT3G54065 48.837 172 82 1 643 808 8 179 6.48e-46 165
MS.gene000642.t1 AT5G04700 33.784 148 91 4 513 657 322 465 5.84e-14 75.9

Find 165 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACCATGCACTTTGCTATAT+TGG 0.216219 5.1:+19375545 None:intergenic
AAGAGAAATTCAATGGTTTA+AGG 0.219517 5.1:-19361325 MS.gene000642:intron
AATTGTGCATCCTAAGTTTA+AGG 0.222878 5.1:-19360820 MS.gene000642:CDS
TTCAAATGCCTTAATATCTT+TGG 0.228747 5.1:-19364554 MS.gene000642:intron
CTTTACCTTGTAATGCTTTA+CGG 0.235529 5.1:-19365283 MS.gene000642:intron
ATCTGCAGGGGCAAGGTCTA+TGG 0.242052 5.1:-19378175 MS.gene000642:CDS
TGGTTTGGATATTTCTCTTT+TGG 0.249792 5.1:-19364961 MS.gene000642:CDS
TGCCATTATAATGATCTTAA+AGG 0.257159 5.1:-19360394 MS.gene000642:CDS
TGTATCACTGCCGAAATATT+TGG 0.261057 5.1:-19366271 MS.gene000642:intron
TTTACGTACCAAAGATATTA+AGG 0.265187 5.1:+19364546 None:intergenic
TGGCATCGGCACAAAGGTTT+TGG 0.267446 5.1:-19365311 MS.gene000642:CDS
AGGGATATCGAACTTATAAA+TGG 0.267889 5.1:-19360374 MS.gene000642:CDS
TGAATAGTTCCTTATGTTGT+TGG 0.279987 5.1:+19375787 None:intergenic
TATGAAGTGATAGGAGTATT+AGG 0.289544 5.1:-19361702 MS.gene000642:CDS
CAAATAATTCCAGGCATCTT+TGG 0.296605 5.1:+19376080 None:intergenic
AAACACATTGGAGGGAGTTT+TGG 0.299305 5.1:+19366336 None:intergenic
GTTCTTCTGGCTGCTGCTAA+TGG 0.317046 5.1:-19366388 MS.gene000642:CDS
GCTCTTGTTGCTCGTTATAC+TGG 0.317566 5.1:-19375573 MS.gene000642:CDS
AAATGTAGTACCTGTTCTTC+TGG 0.322260 5.1:-19366401 MS.gene000642:CDS
TCCCTTTAAGATCATTATAA+TGG 0.322596 5.1:+19360392 None:intergenic
ACACGACCGTTCTACGTCTA+TGG 0.324919 5.1:+19365333 None:intergenic
TTGCACCTGGCAGCACATTT+AGG 0.337420 5.1:-19361396 MS.gene000642:CDS
GGCAGGTATGTGGGGTGATG+TGG 0.348034 5.1:-19376226 MS.gene000642:intron
ATTTATCAGGTAAGGGTTGA+TGG 0.350285 5.1:+19365665 None:intergenic
AATGATTCCCTTAGCAACTT+AGG 0.352296 5.1:+19365724 None:intergenic
TCCTTTGTTGCCCACGATGA+TGG 0.364413 5.1:+19376177 None:intergenic
GCAACATCTTTCACAATTGT+AGG 0.375342 5.1:-19360702 MS.gene000642:CDS
ACTAGGGCTGAGAATTTATC+AGG 0.384280 5.1:+19365652 None:intergenic
GATTAAATATGTACCTTGTT+CGG 0.384788 5.1:+19376017 None:intergenic
TCTTCTCCGCACTACTGGTT+TGG 0.390976 5.1:-19364976 MS.gene000642:CDS
TCCACTGCTAAAAGCAAATC+AGG 0.393791 5.1:+19361552 None:intergenic
TTGGCACCTTGCTCAAGATC+TGG 0.394138 5.1:+19378008 None:intergenic
AAGGATTTCAGAGACAACTA+TGG 0.399962 5.1:-19365439 MS.gene000642:CDS
GGCTGAGAATTTATCAGGTA+AGG 0.401992 5.1:+19365657 None:intergenic
ACTTATAAATGGTTCATTGT+AGG 0.404366 5.1:-19360363 MS.gene000642:CDS
TTGGCTCTTCTCCGCACTAC+TGG 0.404438 5.1:-19364981 MS.gene000642:CDS
GTACTCGATTATTCCATGTT+GGG 0.405978 5.1:+19361599 None:intergenic
TGCTGCAGCATTTACAGTCC+CGG 0.409571 5.1:-19360655 MS.gene000642:CDS
GTGTCTTGATTGTTTCCTCC+CGG 0.418547 5.1:+19360636 None:intergenic
AGATATCGAATAGACACGTT+TGG 0.421008 5.1:-19361429 MS.gene000642:CDS
TAGTGAAAGCTGGAGAGAAA+TGG 0.421795 5.1:-19360737 MS.gene000642:CDS
CGATGTCATCAAATAATTCC+AGG 0.424388 5.1:+19376071 None:intergenic
GTATATTGATAATGATTCCT+TGG 0.427595 5.1:+19365759 None:intergenic
ACCTATCAAAATCTTAGAAC+CGG 0.429091 5.1:-19365695 MS.gene000642:CDS
TATATTGATAATGATTCCTT+GGG 0.430708 5.1:+19365760 None:intergenic
AATGTAAATGACAGCTGTAT+TGG 0.431353 5.1:-19375823 MS.gene000642:intron
TTAGCAGCAGCCAGAAGAAC+AGG 0.431355 5.1:+19366391 None:intergenic
TGCAGTCTTGCGCGTAGAAA+AGG 0.432729 5.1:-19365458 MS.gene000642:intron
GCCATTATAATGATCTTAAA+GGG 0.434044 5.1:-19360393 MS.gene000642:CDS
AATTGCAAAATTCGTCCAAC+AGG 0.435830 5.1:-19365407 MS.gene000642:CDS
TATACTCATTATGAAGTGAT+AGG 0.437799 5.1:-19361711 MS.gene000642:CDS
GACTGAATCGGGTGCCACTT+GGG 0.438352 5.1:+19365602 None:intergenic
TGTTATGCAAAATTATCTGC+AGG 0.440993 5.1:-19378189 MS.gene000642:CDS
GATACTACAAGAACGATAAT+CGG 0.445767 5.1:+19360315 None:intergenic
GATATCGAATAGACACGTTT+GGG 0.446660 5.1:-19361428 MS.gene000642:CDS
CGACTGAATCGGGTGCCACT+TGG 0.450705 5.1:+19365601 None:intergenic
AAGGGTTGATGGAGCGGATC+CGG 0.452318 5.1:+19365676 None:intergenic
ATTGTTCTCTACGACTGAAT+CGG 0.455638 5.1:+19365590 None:intergenic
GGAAGTATGATGAAATCAAC+AGG 0.456778 5.1:-19378275 None:intergenic
ATGATTCCCTTAGCAACTTA+GGG 0.459714 5.1:+19365725 None:intergenic
CACGATGAGTTAGTGAAAGC+TGG 0.461189 5.1:-19360747 MS.gene000642:CDS
TGTACTCGATTATTCCATGT+TGG 0.462868 5.1:+19361598 None:intergenic
CAACTCATGCATGGTCTTGA+GGG 0.464028 5.1:-19361471 MS.gene000642:CDS
ACCTTGTTCGGCATCTGCGC+TGG 0.464081 5.1:+19376029 None:intergenic
GCGTTATCATGCAAGAAGAT+AGG 0.464853 5.1:+19360606 None:intergenic
GTGGAAAAGTTGGTGAAAGA+AGG 0.471656 5.1:-19375645 MS.gene000642:CDS
TCTGATCGTACTAGCAGATC+AGG 0.473845 5.1:-19361366 MS.gene000642:CDS
CTAAAGACAACTACGAAAGA+TGG 0.475006 5.1:-19378217 MS.gene000642:CDS
TGGAGCAAACAGAGAGGAAA+AGG 0.475305 5.1:+19360436 None:intergenic
TGTTAAATTCAACAATAGCC+TGG 0.478929 5.1:+19361670 None:intergenic
ATGAAATACTCCTCTCTACA+TGG 0.479720 5.1:-19360275 MS.gene000642:CDS
GTTCCTTATGTTGTTGGCCA+AGG 0.479824 5.1:+19375793 None:intergenic
TAGCCTTGGCCAACAACATA+AGG 0.480225 5.1:-19375796 MS.gene000642:CDS
ATATATATACAATCCGCTTC+TGG 0.480742 5.1:-19375714 MS.gene000642:CDS
ACTCCCTCCAATGTGTTTGA+CGG 0.480849 5.1:-19366331 MS.gene000642:CDS
TTGTTCTCTACGACTGAATC+GGG 0.484766 5.1:+19365591 None:intergenic
TAACAGTTCACAGCTAAAAG+AGG 0.485414 5.1:-19361652 MS.gene000642:CDS
AGTGAAAGCTGGAGAGAAAT+GGG 0.485776 5.1:-19360736 MS.gene000642:CDS
TGTCTTGATTGTTTCCTCCC+GGG 0.489272 5.1:+19360637 None:intergenic
ATTAGTGAAGTGATTCCAGC+TGG 0.491263 5.1:+19378058 None:intergenic
TCAAAACAGCCAAAGATGCC+TGG 0.493020 5.1:-19376089 MS.gene000642:CDS
TCAACTCATGCATGGTCTTG+AGG 0.493106 5.1:-19361472 MS.gene000642:CDS
AAATGCAAAGAGAAATTCAA+TGG 0.499653 5.1:-19361332 MS.gene000642:CDS
ATTCTCAGCCCTAGTTGCAT+TGG 0.502171 5.1:-19365644 MS.gene000642:CDS
CTGCTAGTACGATCAGATGA+AGG 0.504053 5.1:+19361372 None:intergenic
ACCTTGCTCAAGATCTGGGA+TGG 0.508029 5.1:+19378013 None:intergenic
AACAACATAAGGAACTATTC+AGG 0.509279 5.1:-19375785 MS.gene000642:CDS
CTTCACGTAGCAGTAATTGC+TGG 0.510551 5.1:-19375681 MS.gene000642:CDS
TGGCACCTTGCTCAAGATCT+GGG 0.515085 5.1:+19378009 None:intergenic
ACTTCCTCAAGAGTTTGCCT+TGG 0.517913 5.1:-19360482 MS.gene000642:CDS
GTAAATATGCAAGACAATCA+AGG 0.518848 5.1:-19375609 MS.gene000642:CDS
TCCATCATCGTGGGCAACAA+AGG 0.520149 5.1:-19376178 MS.gene000642:CDS
CGAACAAGTATGCAGCTTCA+CGG 0.521581 5.1:+19364585 None:intergenic
GCTGAGAATTTATCAGGTAA+GGG 0.522930 5.1:+19365658 None:intergenic
TGGAAAAGTTGGTGAAAGAA+GGG 0.523503 5.1:-19375644 MS.gene000642:CDS
TCTCCGTCCCTAAGTTGCTA+AGG 0.527229 5.1:-19365732 MS.gene000642:CDS
GTTAAATTCAACAATAGCCT+GGG 0.529242 5.1:+19361671 None:intergenic
GCAGTGGATAGCTGCTATAG+AGG 0.529950 5.1:-19361537 MS.gene000642:CDS
TCAACAGGTGTTGCCTCCGA+TGG 0.534015 5.1:-19378260 MS.gene000642:CDS
TCTGCAGGGGCAAGGTCTAT+GGG 0.535348 5.1:-19378174 MS.gene000642:CDS
GCTGCAGCATTTACAGTCCC+GGG 0.535605 5.1:-19360654 MS.gene000642:CDS
GTGTCTCACTTGTTACCTGT+TGG 0.537887 5.1:+19365392 None:intergenic
CAAAATTATCTGCAGGGGCA+AGG 0.541543 5.1:-19378182 MS.gene000642:CDS
GTTATGCAAAATTATCTGCA+GGG 0.549502 5.1:-19378188 MS.gene000642:CDS
GTAGAACGGTCGTGTGGCAT+CGG 0.553454 5.1:-19365325 MS.gene000642:CDS
AGTATTAGGTTACTTCTCCC+AGG 0.555214 5.1:-19361688 MS.gene000642:CDS
GTGCCACTTGGGAAAGCTGA+AGG 0.559213 5.1:+19365613 None:intergenic
GGTCTTTCATCATCAACAGC+AGG 0.560214 5.1:+19365370 None:intergenic
ACTTCCAAGGCAAACTCTTG+AGG 0.562987 5.1:+19360478 None:intergenic
CTCCGTCCCTAAGTTGCTAA+GGG 0.564586 5.1:-19365731 MS.gene000642:CDS
AAAGAGGCATCGGCATATGT+AGG 0.569178 5.1:-19361636 MS.gene000642:CDS
ATTGGTTCCGTCAAACACAT+TGG 0.573385 5.1:+19366324 None:intergenic
CGGAATACTCCCAAGTGACA+TGG 0.573604 5.1:+19360335 None:intergenic
AAGAAGAGTCCTACCAGAAG+CGG 0.580276 5.1:+19375701 None:intergenic
TTCACAGCTAAAAGAGGCAT+CGG 0.581822 5.1:-19361646 MS.gene000642:CDS
TCAGGTAAGGGTTGATGGAG+CGG 0.583354 5.1:+19365670 None:intergenic
ACATACCGTAAAGCATTACA+AGG 0.584917 5.1:+19365278 None:intergenic
GATGAAAATCAACACTGAAG+TGG 0.586723 5.1:+19360536 None:intergenic
GTAGGACCAACCATGTCACT+TGG 0.588255 5.1:-19360345 MS.gene000642:CDS
GCTGTATTGGACGATAGCCT+TGG 0.589687 5.1:-19375810 MS.gene000642:CDS
CATATCATTCAACTCTCATG+TGG 0.590047 5.1:-19376141 MS.gene000642:CDS
GGTTCCGTCAAACACATTGG+AGG 0.590762 5.1:+19366327 None:intergenic
TGCTAGTACGATCAGATGAA+GGG 0.592641 5.1:+19361373 None:intergenic
GCCAGCGCAGATGCCGAACA+AGG 0.592911 5.1:-19376030 MS.gene000642:intron
TGGGAATAATATATTGCACC+TGG 0.593148 5.1:-19361409 MS.gene000642:CDS
TTTCTTCCATAGACGTAGAA+CGG 0.593229 5.1:-19365339 MS.gene000642:CDS
GCATGGTCTTGAGGGACGGA+AGG 0.593714 5.1:-19361463 MS.gene000642:CDS
GTCGAGAGAGGTGATTACAT+TGG 0.593782 5.1:-19375759 MS.gene000642:CDS
AGGATTTCAGAGACAACTAT+GGG 0.594972 5.1:-19365438 MS.gene000642:CDS
TTATGCAAAATTATCTGCAG+GGG 0.598370 5.1:-19378187 MS.gene000642:CDS
GTTCCGTCAAACACATTGGA+GGG 0.599972 5.1:+19366328 None:intergenic
TTCCCTTAGCAACTTAGGGA+CGG 0.600074 5.1:+19365729 None:intergenic
TGCTTGATGAACTATTCCAT+CGG 0.606398 5.1:+19378244 None:intergenic
ATGCCTTCAGCTTTCCCAAG+TGG 0.606984 5.1:-19365616 MS.gene000642:CDS
TCATGCATGGTCTTGAGGGA+CGG 0.611068 5.1:-19361467 MS.gene000642:CDS
TACCAATATAGCAAAGTGCA+TGG 0.611483 5.1:-19375547 MS.gene000642:intron
ACCATCCCAGATCTTGAGCA+AGG 0.611737 5.1:-19378014 MS.gene000642:intron
GCATATGTAGGCATGTTGCA+TGG 0.612484 5.1:-19361624 MS.gene000642:CDS
ATATACAATCCGCTTCTGGT+AGG 0.613106 5.1:-19375710 MS.gene000642:CDS
TTTCAACTTCTGAAACACAC+TGG 0.617242 5.1:+19376202 None:intergenic
AATTATTTGATGACATCGTA+TGG 0.620413 5.1:-19376066 MS.gene000642:CDS
AAGGGCCTAAATGTGCTGCC+AGG 0.620581 5.1:+19361391 None:intergenic
CTATTCAGGAGGGTCGAGAG+AGG 0.625844 5.1:-19375771 MS.gene000642:CDS
AGATGCTAATCATACTGACC+AGG 0.626899 5.1:-19378132 MS.gene000642:CDS
AACGTGTTTCAACTCATGCA+TGG 0.629496 5.1:-19361480 MS.gene000642:CDS
AACATAAGGAACTATTCAGG+AGG 0.630434 5.1:-19375782 MS.gene000642:CDS
TAGGACCAACCATGTCACTT+GGG 0.631186 5.1:-19360344 MS.gene000642:CDS
AGTTGAAACTCCATCATCGT+GGG 0.631953 5.1:-19376187 MS.gene000642:CDS
ATGTTGCATGGAGCCCAACA+TGG 0.635878 5.1:-19361612 MS.gene000642:CDS
GTCGTGTGGCATCGGCACAA+AGG 0.637321 5.1:-19365317 MS.gene000642:CDS
GACGTACCCAAATGCTTCAG+AGG 0.639157 5.1:+19364938 None:intergenic
TCTCAGCATAACGCGATGTG+AGG 0.654380 5.1:+19360508 None:intergenic
ATAGACGTAGAACGGTCGTG+TGG 0.659210 5.1:-19365331 MS.gene000642:CDS
ACGTTTCAATGATCTACCCA+AGG 0.661825 5.1:-19365776 MS.gene000642:CDS
AAATGCTGCAGCAAACATGA+TGG 0.670958 5.1:+19360665 None:intergenic
TCTATGGAAGAAATCTTGAG+TGG 0.673125 5.1:+19365349 None:intergenic
ATACTCCCAAGTGACATGGT+TGG 0.675634 5.1:+19360339 None:intergenic
GGGAGGAAACAATCAAGACA+CGG 0.676537 5.1:-19360634 MS.gene000642:CDS
ACATAAGGAACTATTCAGGA+GGG 0.677642 5.1:-19375781 MS.gene000642:CDS
GGAGGAAACAATCAAGACAC+GGG 0.679463 5.1:-19360633 MS.gene000642:CDS
TTGATGAACTATTCCATCGG+AGG 0.681451 5.1:+19378247 None:intergenic
AAATATCCAAACCAGTAGTG+CGG 0.688630 5.1:+19364970 None:intergenic
AAGTTGAAACTCCATCATCG+TGG 0.705194 5.1:-19376188 MS.gene000642:CDS
CTATCATGGAGCAAACAGAG+AGG 0.736503 5.1:+19360430 None:intergenic
GCAGCATTTACAGTCCCGGG+AGG 0.750613 5.1:-19360651 MS.gene000642:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr5.1 gene 19360245 19378291 19360245 ID=MS.gene000642
chr5.1 mRNA 19360245 19378291 19360245 ID=MS.gene000642.t1;Parent=MS.gene000642
chr5.1 exon 19378015 19378291 19378015 ID=MS.gene000642.t1.exon1;Parent=MS.gene000642.t1
chr5.1 CDS 19378015 19378291 19378015 ID=cds.MS.gene000642.t1;Parent=MS.gene000642.t1
chr5.1 exon 19376031 19376243 19376031 ID=MS.gene000642.t1.exon2;Parent=MS.gene000642.t1
chr5.1 CDS 19376031 19376243 19376031 ID=cds.MS.gene000642.t1;Parent=MS.gene000642.t1
chr5.1 exon 19375548 19375831 19375548 ID=MS.gene000642.t1.exon3;Parent=MS.gene000642.t1
chr5.1 CDS 19375548 19375831 19375548 ID=cds.MS.gene000642.t1;Parent=MS.gene000642.t1
chr5.1 exon 19366272 19366464 19366272 ID=MS.gene000642.t1.exon4;Parent=MS.gene000642.t1
chr5.1 CDS 19366272 19366464 19366272 ID=cds.MS.gene000642.t1;Parent=MS.gene000642.t1
chr5.1 exon 19365578 19365820 19365578 ID=MS.gene000642.t1.exon5;Parent=MS.gene000642.t1
chr5.1 CDS 19365578 19365820 19365578 ID=cds.MS.gene000642.t1;Parent=MS.gene000642.t1
chr5.1 exon 19365284 19365475 19365284 ID=MS.gene000642.t1.exon6;Parent=MS.gene000642.t1
chr5.1 CDS 19365284 19365475 19365284 ID=cds.MS.gene000642.t1;Parent=MS.gene000642.t1
chr5.1 exon 19364945 19365004 19364945 ID=MS.gene000642.t1.exon7;Parent=MS.gene000642.t1
chr5.1 CDS 19364945 19365004 19364945 ID=cds.MS.gene000642.t1;Parent=MS.gene000642.t1
chr5.1 exon 19364555 19364629 19364555 ID=MS.gene000642.t1.exon8;Parent=MS.gene000642.t1
chr5.1 CDS 19364555 19364629 19364555 ID=cds.MS.gene000642.t1;Parent=MS.gene000642.t1
chr5.1 exon 19361326 19361759 19361326 ID=MS.gene000642.t1.exon9;Parent=MS.gene000642.t1
chr5.1 CDS 19361326 19361759 19361326 ID=cds.MS.gene000642.t1;Parent=MS.gene000642.t1
chr5.1 exon 19360245 19360853 19360245 ID=MS.gene000642.t1.exon10;Parent=MS.gene000642.t1
chr5.1 CDS 19360245 19360853 19360245 ID=cds.MS.gene000642.t1;Parent=MS.gene000642.t1
Gene Sequence

>MS.gene000642

ATGATGAAATCAACAGGTGTTGCCTCCGATGGAATAGTTCATCAAGCACTTACTAAAGACAACTACGAAAGATGGAAAATTGTTATGCAAAATTATCTGCAGGGGCAAGGTCTATGGGACGTTGTCATCAAGAATGTAGATGCTAATCATACTGACCAGGAAGCTTCCAAAAAGATGAATGATGGAAAAGCTTTGCATGTTTTTCAACTATCCAGCTGGAATCACTTCACTAATCAAAACAAGACTGAGTCAAAAACCATCCCAGATCTTGAGCAAGGTGCCAATTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTCTCCTTTATATGTACTTATTGAAATTCAAATGTACGTATAAGTAAAAAGACGAGTCAATGGCGTCGCAGGTCTGTGGTTTAGGAGTTTAAATTCTTGAACTTTAATTAATAATTATAATAACATATGCATATAAATAATATATATCCAAAAAAAATTGTACTGTACTCAAAATTACAAAGATACTTTACAATTGTCCTCTATGTTCTGAAATAATTGTTAAACACGTCTCTCTCAATATTTGTGTGAATCAAACAAATTGAGTCATATAGCTTAGTGGTAAATCATGTTATACTCAATTGCAGTGTCTTTGGTTCCATCTTGATTCCCAAGTTTAGCTGAAACAAAGTTTAAGTAATAAATAATAGGTCGCTAATTAGTAATTTGTGCCGCAAAGGAAAAGAAACTAGCAGTGGGAGTAACTTTTTTAATTACTATTCCGTCCTAAATTACAAGTTATTTTGAAGAAAAAAAATTGTTTTAAATTATAAATCCCTTTACAATATCAATGAAAGGTTAATGTTATTTTTTCTATAATACCTTCAACTATTTTGACTGTTTCTTCTTTCAGTTCTTTAATTTATTTATCTCATTGTTTATTAAAGACAATTTTGTAAAACAACTCATAATACCTTTAACTATTTATTACTTTTCTTAATAAGTGTGACATGTCCAAAACATCGTATGATTTAGGACAGGGCTTTTTGTTTGTTTGTTAATGATGTACTTTAAATGGTTGAGAGAAATGCTAGAGACGCGCACTTTAAGACATTCTCTTACTCCTATTTATTGAGTCAAGTCACACATCTTTCACTTGTTATCTTGTTAAACATTACTTTTAAAGAGCTGGTGGTTATTAATTCACCTTTTAAGTAAATAAGTGGGGCATTTGAGGTTCGAACTTTGATTTATCTACCGTGTCTACCAATCGAGTTAAACTCACATGATGAGCTATTAAACAAGTTTAATGAATTTTTTATTTTATTTTACGGTCATAGTTTGTCACCACTAATCTCATTCCCACAATCTTCCAATGTCTCATTCTAATCACGATTTCCTTGATACGGTCTCCTCAGTTTTTTCTCGTAAGACCGTTAAAATGATGTGAAAGGGTAACACATTTTTTCTGGGTGGATCTCAACGGGTCAAAAACAGAGTATTATATACAGCATTGCTAAACATTGCGAAGGGAATTAACACGAAAGTATCCCGACGTAAAAACCAACCAATTAAAACTTGCTTCCAGCCAGAATTCACGGGAAGTCTTGCAAAAAAGTAGCAGTCAACAAAACATGGGTTGAGTGGAATAAAGGTCGGGATGCTTTCGTGAAATTGAGATTCGCGTTATCTAGCATTTTTCTATTATATATTTGAAAGAATAACTAATTCTATTTATGATTTGTTATATCATTGCACAAATCGGTTCTTTTGTTTATTTGTAACCCATATAAAAGAGCAGACCAACTCCAATGTAGAACAACTCTCATAGGGACACAACCTCAATTAAAATTTATTTAATCATATACACAAATATGAATGAATTTTTTTTAATTAATATGTAACTAAATTGATTTAATTTAATTCGATTCATTTGTGTGTGTGGATTGTGTCCAACTAAAAATTTCTCCTAAATGTATATGTTTATTTTCCCCTCTAAATACTTGTGGTTAAGTGTAAATTGATATGCTGGGGGCAGGTATGTGGGGTGATGTGGTCCAGTGTGTTTCAGAAGTTGAAACTCCATCATCGTGGGCAACAAAGGAGAAAAAAGCTTTGCATATCATTCAACTCTCATGTGGACGAGAGATTGTTGATGAGATTAGTCATTTCAAAACAGCCAAAGATGCCTGGAATTATTTGATGACATCGTATGGTGACGAGTTAAAAGCCAGCGCAGATGCCGAACAAGGTACATATTTAATCATTATTTTAAATTTGAATCAAATGTATTTTTAACAAAAGAATCTTTATATAATAAATTACTCAGATGTTATTTGTATACATCGAAAATAAAAAATATGTAAAGTTAGGGGGTTAAAAGTGCATTTAAACCTAAAATGTAAAAAAGAATATGACAGGAATATTTAACTCTTGAATGTAAATGACAGCTGTATTGGACGATAGCCTTGGCCAACAACATAAGGAACTATTCAGGAGGGTCGAGAGAGGTGATTACATTGGAAACATCGATACAGATTCAGACATATATATACAATCCGCTTCTGGTAGGACTCTTCTTCACGTAGCAGTAATTGCTGGAAATTTGAAAAATGTGGAAAAGTTGGTGAAAGAAGGGAAAGACAAGTTAGTAAATATGCAAGACAATCAAGGTGACACAGCTCTTGCTCTTGTTGCTCGTTATACTGGAAATACCAATATAGCAAAGTGCATGGTAGAGAGAAAAATCGGACCTCGTGATGAGGAATCAGAATGCATGGTAATGACAACAAAGAGGTTTCGTGAACTAGTAGCAGAGAACATGGTTAAGACAACGACGAGGTTTCTTAGGTTTCTTGAACTAGAAGCAGAGAACATGGTTAAGACAACAACGAGGTTTCTTAGGTTTCTTGAACATTTAGCAAAGAGTATGTAACACCCATACTAGACGTATCTAGAAAGTCTAGCACGCGCGTTGAATTTAGTATTGGATACATTAAAATATACAACATAAAAATTTCGAATGAATTTGTATACAACAAAACACGTTCGTACAATAACAATACATCACATAATATCCTATCTAAAATAAATACATCCTTGAGATCCATATTCTTCACGCTTCAGGTACGAACGAGCTCTTGCAGAAAATCCATTCGGCTACTAGCTTGCCATCCATCCTGATAATCTGAAACAAATAAGGATTGGGATGAGACATAATGTCTCAGTGAGTTCCCCTAAATCCTAGGCTATAGGCAACCTCAAGGGGAAACCTACGGTCACCACGTGTCTACATTACAACCTGACGGTTGATTATACGTGTGTGGGGACTTGCATACTTAGACGGTAGTGCATACTAGAGCCGTCTTAGTTTTATCTTATCTTGTTATAGGCATCACTTCCTATACGTGTCATGGCGGTCGAGGGGAACCTAGAACCGCATTGCCAAGGATACACTCAATGTATCGAGGCCTAAACATAACATATTCATGGCACGATTCTAAACCGGACGATTAGGGGAAATCTAAAATCGTCACCGGTTTCATATTCTTTACTTGCTCTACACATATCTTGCTCTTGCCTAAAAGCATCTTGTTCTAAAACATAATCATACATAGGCTCTTCATGAGCATAACATAATCGTGCATAGAGACATACTCATAACATACATGTCGTACATAAGTTCATTTATTAAGTTAGCGTTGAACAAACATTATCATCTTGGTTCATTTTACGGAAAGTCCCGGGTGGAGTAACCCTGAGTACAATCCCATCATAACCGATGTACGTACATCGGACTCCCTCAGTGACATGCGGGTCCCTTACGGCTTAAATCGTTCTCATAATGAGAACCCCTTGAATCCATACCTTCATGGATTGCAAGAGACATGCCACCTACATCTTAATTACTCAGTACCATGTGATCCCCTTACGGAGCCTTCCCCGTTCCCATCATGAGAACCCCTTGAATCCATACCTTCATGGATTGCAAGAGACATGGCACCTACATTACATAAATCATGGTCTTGTCATTCATTTAGGTTAAACCTAATCATGCATACATATTTACCTCGGATCCTTGATCGATCCGATTAGCGGTAACTCATACTTGTTCATGCTTGCACATTCGTAATCATGGTGGAGTGGTTAACTAATCAAACCACACCTTAACATACATGTTATCTTATTCATAAACATGTGCGAAGAGTTTACACTTCGCGTCTTAACATTCTAGGAATCTTGCTAACTAGCTAGTTCTCGACAACTATGTCGAGGCTCTAGTTTTCCCTTGCTTAATGAATATTTTGCTACCCGATTCATAACTTGTTTCTATCATATGCCATGCCTTACTAACATGATTAATACTTGCTTCATTTCATCATAATCTTGCTTTCATTGATCATCATTTAGGACCTTGGTTTGAGGGGTTTACATTCGTAAAAAGACACCACGGAGAAAGCCGCATCGCCAAGCCCCATGCCTGCCTAAAGCAAGCAAAACAGTGAGATTTTTCACTGTCTTACTCGCCTAGGCGAGTGGATCTGCTGGGGAGGCGAGTGGTAACTCGCCGTGGCGAGTTGGGGGCGAGCAAAACCCCCCATTCGCAGTTCTAGCTCGCCATGGCGAGTATTAGCTCGCCGTGGCGAGTTAGGACAGTCCAGAACACTTAAAAATGGTATTTTTGACCCAAAAACCTCAAACCAAGTGTCTCTATGTGTTTTGGAACATAATTGATCATTGGAAACTTATAAAACATTCATTTGGCAAGTATAAACATGTTTAGTGTGCATGGCAAGAAAAGGGGCAACTAACATCTTACATAATTCCTAGAATTTTCATAGCTTTCATGTTAATCTTAATTGGCATAAACATAATCCCAAAGGGTGGGAAAACTATCTATGGAACTCACCTAAACCAAGTTCTTGAAGCATCACCATGTGCCAAGCTCAAACATGCCAAAACCCTAGCCTTGCTCCACTTGCTTCCTTTGTCCAAAACTTTCTATCTTGATGCTTTTCTTGCAATCTAAGACATCATGATCCTTGATTGATCATGAAGAAACCATACTTGAACTTACTCACCAACAAACCCTAATTCTTGCTTCTTAGCTCATAGTTGTTTCTTGCTTGTTTCACCAACCCCATGAAGCATAATCAACATAAGTTCCCAAACCAACAATCTAAAGCCTCAACTTCTTGATCAAGATCAAACCCTAGATTTTAGATCTCTTCTTGAAAGGAGAAAAGGAAGAATCAAAGAAGACTAAGCTTCCATAAGTTAGAGGATCATGAAGGAACAAGAAAATATGCTTGATATAAAAGGAGAATTAGAGAAGAATTAAAGAAAGAAAGAGAGAAGGGCGTGGGAGAAGAGAAGGAGAAAGAGAGAAACTCTTGCCAACATAGAAAGAGAGAGAAAAGGATAAGGGTTATGAGATATTTTCCTCCCAAAAACAATATAAATATCCTTTCCACATGAATTTACCATTTTGCCCTTGCCTCAAGCGTGTTAAAAACGACTCTGATACTTTTCCCGTAAAAAGCTGACATACCATAAAATATTTTCCATTAACTTACTTTTCCATGAATTTAATTCCTCTGGCACGATCATGGGTAATATCTCGATACTGACAGGCGGGATATTACATTCTACCCCCCTTAAAAAAATTTCGTCCTCGAAATTTAGAGATCGACTACCAACCAACACGACAAAATCTTAACATCTATGGTCTAAGCCATACCTATTCCATTCCAGCATTCCCAAGAAATTCATCATTGCTTGTGTTCCGTCTTGTTTCGTGATTCATATACATAAGCATATAGCTTTCTTGATATTAATATCACTTAAACTCTGAGTTATCTTAGTGCATCATGATTTGGGACATTCCATGCTAAACATAGACTCATTGTTTCGGATTGTATCTTACCCACTTAACATAAAACATTCGTTGAAGTAACTTATCATAAACATGAACACTCAGGATTTGCCTTTTAACTGGAATCCTATCGGGAACCAGGTTTGCCCTGCAGTGCTTACTTACAACATAAAACATCTTTTCATGCATATATGATCTTTCTTACCGCACTTTGCGAACTATGCCTCTTACATACATTACTCATATAGACGATTCCACGAATCTCTTAACGAGTCTTAAGAAATCTTTCGATCTCGTTGCAATCTCATTGCATCTTATCGCACCCGAACTAATGGGTAACTCATAAAGCTTGACACAGAGGAATGTAATCAAATTGTTACTTCATCTGGAAATCTAATATCCAACGTTGTAGTTAACGTGTTCTTGAAACTTTCTAGCAAATCCACTTACACTTACATCAGACATTCTTAACACATTACCGTGTATCCTGTAGGATATTGGCTTCATACGAACATTATCGTTTCCATAACTTATACATACTTTCAAGTGCCGCCTCTTGTTAAATGATAACGATACATGTTCTAAAATCTTTCTTAAGGAAACTTTTCTTAAACTTTGGTATTCAGGTTCTTGGAACGAATATACACATGACTAAAAAGATTTTTATCATTCCCAAAACTGAATTTGTAATGGTACTACAGAACCACCGGACGAGTTTTCTATATTTTGAAAAAGATTTAACAACTCGCCCCAAACTTGTCCACGACTAGTTGGTTCTGAAGCTTGTACGTCTTAAATGAGATTACTTACGACGTATCTTATCAGTTTTGAAAATGTAAAATTTCATGAGTTAAAAATAAGTATCGTTTCCAAGTTCCTAAGTACCAATCTTAGCTTTAAAAGTTATAAAATCATGACTTAACATGTCTTAACAAGTATCGTTTTCACTCAACAAGTATTGCATAGAGAGTATGAGTCTCATTGCACAAATCTCGAGAGTCGCATCTCCCTACATAATAACATACTTAAACTTCCATATTTCATGATTAATCGATTAGCTTCCATGGCGCTACTCTGATTCCCTCCGGTTGGCTTAAACAAATACTATAATCCATTAAAGCAAATGAGACTTCAATTCATGCTTATCACTTGATTACTTACTTCTTGAGAACTTCCATGTTGCAACCAACATCACCACCTTACACTTACCTTATAAATTCAAACTCATGATATTTTATTTTATGCTCATAATACTTGACTTGGGGGTAAACCTTATGTTCTTGCTGGTTACATTTACCATACATATCATATCTGAACTTATTTCCGAGTAAACTCAAAATCTTTGACAAGCTCATCTTGCACTTGAACATATCTTTCTTGAACATCTAATCCTTGTACCTTCGCATTCTCGCATACTATATTTTGCTGAACCATACCATTGCTTGCTCGTTAATTTTTCCTTAAATAAAACTTCATAAAATAGTGCATGGGTCATTGACGTTGATGATTTTCTATTTTATAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATCAAGTTTAGGCCCCGGCCATTGCTTCGGGAATCATAGAACGAGTTGATAACACATACGTGTCACCAAACCTAGACTCTAATGAGTCTAGCCCGCTCTACAAGTGTCGTAGCAACCCGGTTCCTAGAAAATTTCCTATGAATTTTTTTTTTTTTTTTTTCAAATGTCAACTTCAATCACCCATAGGCACAATTTTTTTTTTTTCTAAAATTATTTAAACATCATATCGAGCCTTAGCAAGTCTATTAAGCAAAACATAGATTCGAGAAATACGTCATAATTCTGAGAACCTTGTGTTTTCCATAACTTGCACCGCTTTAACTTCCTTCTTCATACCTTCACATCTATGACTTCCGTATCAATGCCGGAACTTCCAATCTCTTGGTCTGAGCTCTTTCTTGACCCTTGACACATTAACTTCCAAAGCTACCCTAAACCATATCGATTTCGTTGATCGTTGCCTATGCCTTTTTCCTTGAAAATCTTAGGAGATGATATGCATTCGTTACTTGATGTCATAAAAGGTTTTCATCACATAAAAGATTATTGTGAGAACATCTCACCAATAGTCATTGCAAACCTTTGGAACGAACGGGTAAATTTTTCATAAAAACGGAAATTTCGTTCCAAGTTCGCTATGGATGAGTTTCTCCAACTATATTATTTTTCAAGTAACCAATGCACATCATTCATTCCTAGCATCGTAAAACATTCTATAACATTTGCATGGCAACATCAACCTTTTCGATACAATTCTTGGCACGTCGGAAATCAATGCCTTAACCCTAATTACATAAAACTTTCTCTTGAATCCTCAATTTCCTCCACTACGAATAGCTTACTTCTTTACGTTGCCACTTACGCAACTTGACAAACCTTCATATCCTTAACTTCATTTACATAGTGCTACTCTTGAGATCCTGCTGTCTCCGTCAACATATGTCGACCTCTTACTACCTTGTAGCCTTGTTCTGACATTCCAGAATATCATAAACTCGTTCCAACAACAACTCTTACCGAAACTTCCGGTCATGGTTAGATACATATATCCAACTTTTTTTCTTTTGGGTACATGAGTATTACTATCATCTTACCCGACATTGTCGGAACATCCCTTCTTAACATACCTTACATTCCCGGAGGATTCACACTTCTACTTACTTTGTTCACCGGCCACCTTTTGGCACGATCGAACTTCTTCATCACATACTTCATTCCTCCTGGGTCCTATTCAGCTCTCAGGCATCCATTCTAATCGTTGAATGCTAAATTGAGTTGATCAGGCTCAACTAACATCAACAAATAGAACATTTACCTGGAACCTAATGGTCCCACTACGTTAGTTGTAATTTAATGACCCAAGGCACGGTCTGAATCGACCTGCTCTGATACCAAATGTAACACCCATACTAGACGTATCTAGAAAGTCTAGCACGCGCGTTGAATTTAGTATTGGATACATTAAAATATACAACATAAAAATTTCGAATGAATTTGTATACAACAAAACACGTTCGTACAATAACAATACATCACATAATATCCTATCTAAAATAAATACATCCTTGAGATCCATATTCTTCACGCTTCAGGTACGAACGAGCTCTTGCTGAAAATCCATTCGGCTACTAGCTTGCCATCCATCCTGATAATCTGAAACAAATAAGGATTGGGATGAGACATAATGTCTCAGTGAGTTCCCCTAAATCCTAGGCTATAGGCAACCTGAAGGGGAAACCTACGGTCACCACGTGTCTACATTACAACCTGACGGTTGATTATACGTGTGTGGGGACTTGCATACTTAGACGGTAGTGCATACTAGAGCCGTCTTAGTTTTATCTTATCTTGTTATAGGCATCACTTCCTATACGTGTCATGGCGGTCGAGGGGAACCTAGAACCGCATTGCCAAGGATACACTCAATGTATCGAGGCCTAAACATAACATATTCATGGCACGATTCTAAACCGGACGATTAGGGGAAATCTAAAATCGTCACCGGTTTCATATTCTTTACTTGCTCTACACATATCTTGCTCTTGCCTAAAAGCATCTTGTTCTAAAACATAATCATACATAGGCTCTTCATGAGCATAACATAATCGTGCATAGAGACATACTCATAACATACATGTCGTACATAAGTTCATTTATTAAGTTAGCGTTGAACAAACATTATCATCTTGGTTCATTTTACGGAAAGTCCCGGGTGGAGTAACCCTGAGTACAATCCCATCATAACCGATGTACGTACATCGGACTCCCTCAGTGACATGCGGGTCCCTTACGGCTTAAATCGTTCTCATAATGAGAACCCCTTGAATCCATACCTTCATGGATTGCAAGAGACATGCCACCTACATCTTAATTACTCAGTACCATGTGATCCCCTTACAGAGCCTTCCCCGTTCCCATCATGAGAACCCCTTGAATCCATACCTTCATGGATTGCAAGAGACATGGCACCTACATTACATAAATCATGGTCTTGTCATTCATTTAGGTTAAACCTAATCATGCATACATATTTACCTCGGATCCTTGATCGATCCGATTAGCGGTAACTCATACTTGTTCATGCTTGCACATTCGTAATCATGGTGGAGTGGTTAACTAATCAAACCACACCTTAACATACATGTTATCTTATTCATAAACATGTGCGAAGAGTTTACACTTCGCGTCTTAACATTCTAGGAATCTTGCTAACTAGCTAGTTCTCGACAACTATGTCGAGGCTCTAGTTTTCCCTTGCTTAATGAATATTTTGCTACCCGATTCATAACTTGTTTCTATCATATGCCATGCCTTACTAACATGATTAATACTTGCTTCATTTCATCATAATCTTGCTTTCATTGATCATCATTTAGGACCTTGGTTTGAGGGGTTTACATTCGTAAAAAGACACCACGGAGAAAGCCGCATCGCCAAGCCCCATGCCTGCCTAAAGCAAGCAAAACAGTGAGATTTTTCACTGTCTTACTCGCCTAGGCGAGTGGATCTGCTGGGGAGGCGAGTGGTAACTCGCCGTGGCGAGTTGGGGGCGAGCAAAACCCCCCATTCGCAGTTCTAGCTCGCCATGGCGAGTATTAGCTCGCCGTGGCGAGTTAGGACAGTCCAGAACACTTAAAAATGGTATTTTTGACCCAAAAACCTCAAACCAAGTGTCTCTATGTGTTTTGGAACATAATTGATCATTGGAAACTTATAAAACATTCATTTGGCAAGTATAAACATGTTTAGTGTGCATGGCAAGAAAAGGGGCAACTAACATCTTACATAATTCCTAGAATTTTCATAGCTTTCATGTTAATCTTAATTGGCATAAACATAATCCCAAAGGGTGGGAAAACTATCTATGGAACTCACCTAAACCAAGTTCTTGAAGCATCACCATGTGCCAAGCTCAAACATGCCAAAACCCTAGCCTTGCTCCACTTGCTTCCTTTGTCCAAAACTTTCTATCTTGATGCTTTTCTTGCAATCTAAGACATCATGATCCTTGATTGATCATGAAGAAACCATACTTGAACTTACTCACCAACAAACCCTAATTCTTGCTTCTTAGCTCATAGTTGTTTCTTGCTTGTTTCACCAACCCCATGAAGCATAATCAACATAAGTTCCCAAACCAACAATCTAAAGCCTCAACTTCTTGATCAAGATCAAACCCTAGATTTTAGATCTCTTCTTGAAAGGAGAAAAGGAAGAATCAAAGAAGACTAAGCTTCCATAAGTTAGAGGATCATGAAGGAACAAGAAAATATGCTTGATATAAAAGGAGAATTAGAGAAGAATTAAAGAAAGAAAGAGAGAAGGGCGTGGGAGAAGAGAAGGAGAAAGAGAGAAACTCTTGCCAACATAGAAAGAGAGAGAAAAGGATAAGGGTTATGAGATATTTTCCTCCCAAAAACAATATAAATATCCTTTCCACATGAATTTACCATTTTGCCCTTGCCTCAAGCGTGTTAAAAACGACTCTGATACTTTTCCCGTAAAAAGCTGACATACCATAAAATATTTTCCATTAACTTACTTTTCCATGAATTTAATTCCTCTGGCACGATCATGGGTAATATCTCGATACTGACAGGCGGGATATTACAGAGTACCATTCCCACAACCCGTGAACAACTAGCAAAGAGCTCGGTAAAGACAAAAAAGGGATTCCGTGAAGATTTAGGAAACAGCCGTACTGTAAAGAGAATAAAGAGGATTCGTGAACGGGTACCAGCACCAAATATAAGAAAGAGCACGGTAGAGACAGAAAAGAAGAATCATGAACCGGTAGAACAAGAAAAATGTAGCATTGTAGAAACAGAAAATCTAGCAAACAACACCAAAATAGAGACCAAGAAGGTGGAGATACGTGAAAAACTACTTCAAATGCAGAACAAAGAAAATGTAGTACCTGTTCTTCTGGCTGCTGCTAATGGATACAAAGAATTGACTACGTATCTCTACTCCAAAACTCCCTCCAATGTGTTTGACGGAACCAATTCACAAAATCGAGTTTTGCTTCTTTCACTATGTATCACTGCCGAAATATTTGGTAAGAAAATTTAAAGTTGCTATGCATATTTTTGTGTAAAGTGAAAAATATTGATTTTTTAAAAAAAAAAAATCAAATATTTTTAACATTTTGGGAAACTTTAAATTTTTTTATAGTAGTTTGTATGAAAAAAGTACCTGTATCGTAAATACAATTAAAAATAATAATTACTTTTTCGAATGTATTCTCGCCATTATACCATTTTCATTAGTTGAGTCTAGAGGTCAAGGTAATTCATATTTAGTGTTGGGCAAGGCTCAAATAAGATTACTTCTGCTAGATGAGATCTATAGGAAACCAAAAAAAATACATACCATTCTCATGTATTCTATGAACTCCTCAGAAGGTAGATTTTCTCATTAAGGGTCGTGACACTTTCTAATATAATACAAATGTTTCAAGATACTTGCTAACATTTTTTTTTTCTATGTGGTTTTATTTTATTTATCAGATGTGGCTTTGAGATTACTCAGACGTTTCAATGATCTACCCAAGGAATCATTATCAATATACGAGTTCTCCGTCCCTAAGTTGCTAAGGGAATCATTATCATTACCTATCAAAATCTTAGAACCGGATCCGCTCCATCAACCCTTACCTGATAAATTCTCAGCCCTAGTTGCATTGGCTAAAATGCCTTCAGCTTTCCCAAGTGGCACCCGATTCAGTCGTAGAGAACAATTCATTTATGATAGTAAGTTTTCGCCCTTTTCTCAATATCATTATAAAAAAAATAAAAAATAAAAAAAAGAGCACGAGTTTCGTTTGAAGAATAATAAGGATCCGTATTATGCAGTCTTGCGCGTAGAAAAGGATTTCAGAGACAACTATGGGATGCCAGAAATTGCAAAATTCGTCCAACAGGTAACAAGTGAGACACCTGCTGTTGATGATGAAAGACCACTCAAGATTTCTTCCATAGACGTAGAACGGTCGTGTGGCATCGGCACAAAGGTTTTGGATTTTCTTTACCTTGTAATGCTTTACGGTATGTTATGTTCTTTCTCTCTTACTGTCATATTGGACAAAATTTATACGATGTTCTTTATTTATATTTAAAACCCGGGTTTTTTTACGCCTTTTTATAATCAAAACTAAAAAACTATTTTTTTAGAGAAACAACAAAAACAGCACCTATAACACTGCATATAAGTTTTCTCATATAAATAATTAATTATTTTAGTTCATTAGACAAAGAAAAGTACTTCTACTTGTTACTTTCATACGTGAATACATATATCATAAATGGCTCAAACATTTTCTTTAGGTTGGCTCTTCTCCGCACTACTGGTTTGGATATTTCTCTTTTGGCCTCTGAAGCATTTGGGTACGTCGTGTTTGTTAGGTTTATTTGATACTCCCTAAAAATAAAAATATGGATGCAGACCAAAATTGCAACGGGTTAAAATAAGGATCAAAAACCCAAATTTATAAATTTAAAGACATAAACCGTGTTTTAGATTCAATATTGGATCAAAGATGCATTTAAGTCCGAAAATTTATATTAAAAAAACATTTTAAAAAATTTGATCCTACAAGTTTTGATACACTATTTCTATACTTGATTTCTTAATATATGTACTTGGAGTATTTGCATGTATAATACACCAGCAACATTTTTCTGATTTGTGGATTTGTTCAGGTCTACTACTTCGTATAGTATTCCGTGAAGCTGCATACTTGTTCGTTCAAAGTTTCAAATGCCTTAATATCTTTGGTACGTAAAATCAAATGCAGAAGTTCCTTTTAGAATATTTAAATATCTTTTATATTGAGTATGTCTCTTTTATATTTGTCTTGCTTATTGCTCTGTTTCAGATGAATTATATTAACCTGTGTGTGTATATAATATGATATAACAATATTTTACATTTAGTTCACAAAATATATAAAAAATATATATTTTACATACAACAAAATTTTTGACTACCTCTTTCAAAAACAAAAAAAAAAAAAAAAAAATTGATTTCCAAGTCTTTGTTGTTTTCACTACCAAAGTCGTTATTAGACTATCATGTTACCAAATATAAAAGATACATACTAAATATAAAAGAAATTTACATTTTTAATAGTTCCACTCATCCCCTTCATTATTCCCTTAACCTACATGGGGACATGAAATTTAGAATATGTTTGTTTAAGCTTTAAATTACATTCTAAACATTGTTTATGATATTAAATATCAAGTTAATAAAAAAATAACGTATATCTATAATCAAGGTTATTTCAGATAGAACTCGAGTATTCCTAATTGTTTTCACTTTACCCGAACTTGATTAATCATTTAAGTTCAACATTGTAAGATAAAAAAAAAATTCTCTATCTAACAAAATAATTTCTCTATCTTCTCTTTAGATCCCAACCACACCACCGTCCCTTTCGATCCAAATCTCGTTGTACAAGATGTAGATGGTGGTGGTTGGTGGTGCGAGGGTGGATAAACCATCCGCACCGCCTCTCATCCCTGTCCTTTCGGCGGTGGTTCATTGGAATATCAGGTTCTAGGCGCATCCTATCTTAGTCCGACAACTGTTTCGGTCCTCGTCATCGTAACTGGGTCCTTGTAGATCTATTTGCGGTTGTTGTTGTTTACTGTATCTTGATTTTTGGGTTTCCTTTTGATCGATTCCTTCTCATCGTCGCTGTTTGCCGCCGTGGAACGATGTTTTTCAGAGTAGATCTGGGTCAAGTATGTGAACAACGTGAATAATTTTGGAGGGTTTGGGCAATCAGATCTGATTCAATTTATTCAAGGTTATGGATGGAAATTACAAAGCATGGTATGATGGGTTTGCTCCGTGGGTGGGAAGAGGGATTCGGTTGCAGTATAGGAAGTTATTGGAACATTGTTGCAACATGGGGTCAGGCATGCTATAGTGTCACGATCAATTTTTAAAGTAACATGAGGTGGTTCTTTTGGTTCGGAGTCTTGTATGATGCATAAGGTGTTTTGTGGTGGCTAAAAAGAGTGGTGGTGATGTTTTTGGGTGTTTATTTGTGCTCGACGGATGGAAGGAGTGGTGTGGTGGTGAGTTGGTGGTGGTGGTAACGCATAGTGGTGGTGGTGCGCGGTGATGTGGTGGTGGTGATGTGTGATGGTGGTGGTGCTTTTTCCTTTTCACCGACGGCCGCGTTTATATTATCTGGGTTGTGTTTCCACTTCAAACCGGCGTCGCTGCCCGTGTTTTGTTGTTGGTTTTTGTCTTCCTCTAGATCTGTGTTTGTGTGGCCATCTGTTTCTTGATGAGGCGGTTTGGCGGGATAGTTTTGGTGGTGGTGTTGGTGTTGTTGAGGGGTGGTGGTGGATCGTTTTGAGGTGGTTGTGGTAGCGGCGATGAAGTGTGGCCTTGAGGGTGTAACGGTTTGTGTCGGTGTACGTGGGGACTGGTTAGGAGGTGTCCAAACATTTTGCGGACGAGAACTATTTTTCAGGGGGTGGTTAGGAGGTGGTTATTTTCGTGGTGGTTGTTGTGGGTGATTCCATGTGGAGGCCTTCTTTGTTACGGGTCCATATCTGTTGCCGCTTTCTCTTGTTTGTGTTTAGGGTGCTTTGAAGATGGGTGTCCTTCGAGCTGAGCAGCTTTCTTTTTTTGAGTTAATTGACGTTTTGCACAACCGTAAATCATGCCGATTGTCTTACTTTTTGTGTGCTAGATGCTGGTGGGCCAGTATTTTGCTTCGAGGTCGGGAGCTGGTGTCTTTCTGCAATCTTGTTTAGACTGGCTTCGGTGTTTCTCTGGTGGATAGGGGGTGAGGAGGCCGGCCTTCTGATTTGGTCTTGAAGTCGGGTGGGCCGATCGCTTTTGATTCAAGATTGGGAGTCAGTTCTTTGGTTCAAGTTTGGTTTTGGGCTTTTTAAGGTGTTCTTTCGGTGGACCGGAGGTTGTGCGGTGGTGGAGGCTAATTGATCTTTAGAAAAGGTGGATATGGCTCAGTTTGAGTGATGAAGACTGGGCCTTCTTTTACAAGGGTGTTCTTTTAGGTGAGTATTGACGATGGGTGTTATGAATGCCGTTTTCCGGTGGTTGATGGTATAGGAGTCAATTTTAGGTGGGGATATTTATTTTGGTGGGTGTTGTCCTTATGGGTTGTTGATCGCAGGGGTGTCTTTTTTGGTGTTTTGTTTCAGGTGTTCCGCCTATATACGACGTCTTTTAATTGTATTTTACCGGTCTCTGTTCGTCTTGTGCAGCGATCGGATTTTTAATAAATTTTTGCTGATTCAAAAAAAAAATCATTTAAGTTCAACCAAATGTAAAATATTGTTGTATCATATTAATAATTATGCTTAGGGTTTTGCTAACGAATGACGCTGAGACCAAAATTAATAATTATGCTTAGGGTTTTGCTAACGAATGACGCTGAGACCAAAATAAAAACTTGATATTTGTGAAATCATTAACATGCATGACCCTATTAGTATTAATTTTGTACAACTTATATGGTTATTTCCAATTGGTTTTAAGCAACAATTGTCAAACACTTACTCTAAGTCACTTGAATTTGTGTCAGGAATCAGAAAAATATATGACAAGAAATATACTCATTATGAAGTGATAGGAGTATTAGGTTACTTCTCCCAGGCTATTGTTGAATTTAACAGTTCACAGCTAAAAGAGGCATCGGCATATGTAGGCATGTTGCATGGAGCCCAACATGGAATAATCGAGTACATAAATGCAATGACGCATGCTAATCCTGATTTGCTTTTAGCAGTGGATAGCTGCTATAGAGGCATATTTTCTTATGCAATTATGTATCGTAAACAAAACGTGTTTCAACTCATGCATGGTCTTGAGGGACGGAAGGAGATATTTAGAAGATATCGAATAGACACGTTTGGGAATAATATATTGCACCTGGCAGCACATTTAGGCCCTTCATCTGATCGTACTAGCAGATCAGGTGCTGCTCTGCAAATGCAAAGAGAAATTCAATGGTTTAAGGTTAGCTCTCTTATCTCAATATATATAATTTAAGATATTTTTATCACATTCGACGCTAAAATTCATTGCATTAGGAATAATCTAAACAATATTTAATTTTAGAAAAGGAAACTTTGCACTATAAAGAGACAATATACAAGCAAGCGCAATAAAAATCGGTTGATGCTCACATTAGAATTCGACTTTCCACTAATTTAAGATAATAATCTTTGAGCATATTCTAATACATGTTGTTGACCATATATATTCAGCACTCCAAATGTTCTAGGTAGAAGATTTAATGTTGTTGAAGCTCCAATTGTATTAAGAGTCATGTATCGGGCTCTCTGACTTTATTGAAGATCTGAAGTGTAGTTTTTGTCAACATTATAACAACACGTGATTTAGTCAATCAAAATATGCACTTTTTTAACAGTACATATATGTCATCTATGGCTTCTTTATTGTAAGTTAATTGCTTAAAAAATCACAGGCAGTGGAGAAAATTGTGCATCCTAAGTTTAAGGAAGCCAAAAATAGCGATGGTAAGAAACCTTATGAAATATTCACCGAAAATCACGATGAGTTAGTGAAAGCTGGAGAGAAATGGGCAAAAGAGACAGCAACATCTTTCACAATTGTAGGTACTCTCATCACTACCATCATGTTTGCTGCAGCATTTACAGTCCCGGGAGGAAACAATCAAGACACGGGTTTGCCTATCTTCTTGCATGATAACGCATTCACTATATTTCTCATAGCAGATGCAGCATCTCTCTTCACATCTGCCACTTCAGTGTTGATTTTCATCGGGATCCTCACATCGCGTTATGCTGAGAAAGACTTCCTCAAGAGTTTGCCTTGGAAGTTATTTTTCGCTCTTTGGTTCCTTTTCCTCTCTGTTTGCTCCATGATAGTTGTTTTTTGTGCTGCCATTATAATGATCTTAAAGGGATATCGAACTTATAAATGGTTCATTGTAGGACCAACCATGTCACTTGGGAGTATTCCGATTATCGTTCTTGTAGTATCACAAGTGAGATTCATGTATGAAATACTCCTCTCTACATGGAAAAATCCCATTCGTTCTATAAAAAAATAA
Protein sequence

>MS.gene000642.t1

MMKSTGVASDGIVHQALTKDNYERWKIVMQNYLQGQGLWDVVIKNVDANHTDQEASKKMNDGKALHVFQLSSWNHFTNQNKTESKTIPDLEQGMWGDVVQCVSEVETPSSWATKEKKALHIIQLSCGREIVDEISHFKTAKDAWNYLMTSYGDELKASADAEQAVLDDSLGQQHKELFRRVERGDYIGNIDTDSDIYIQSASGRTLLHVAVIAGNLKNVEKLVKEGKDKLVNMQDNQGDTALALVARYTGNTNIAKCMVEIREKLLQMQNKENVVPVLLAAANGYKELTTYLYSKTPSNVFDGTNSQNRVLLLSLCITAEIFDVALRLLRRFNDLPKESLSIYEFSVPKLLRESLSLPIKILEPDPLHQPLPDKFSALVALAKMPSAFPSGTRFSRREQFIYDILRVEKDFRDNYGMPEIAKFVQQVTSETPAVDDERPLKISSIDVERSCGIGTKVLDFLYLVMLYGWLFSALLVWIFLFWPLKHLGLLLRIVFREAAYLFVQSFKCLNIFGIRKIYDKKYTHYEVIGVLGYFSQAIVEFNSSQLKEASAYVGMLHGAQHGIIEYINAMTHANPDLLLAVDSCYRGIFSYAIMYRKQNVFQLMHGLEGRKEIFRRYRIDTFGNNILHLAAHLGPSSDRTSRSGAALQMQREIQWFKAVEKIVHPKFKEAKNSDGKKPYEIFTENHDELVKAGEKWAKETATSFTIVGTLITTIMFAAAFTVPGGNNQDTGLPIFLHDNAFTIFLIADAASLFTSATSVLIFIGILTSRYAEKDFLKSLPWKLFFALWFLFLSVCSMIVVFCAAIIMILKGYRTYKWFIVGPTMSLGSIPIIVLVVSQVRFMYEILLSTWKNPIRSIKK