Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000668.t1 | XP_013469902.1 | 97.7 | 752 | 11 | 1 | 1 | 752 | 1 | 746 | 0.00E+00 | 1447.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000668.t1 | P0CR39 | 43.1 | 772 | 403 | 14 | 1 | 750 | 1 | 758 | 3.7e-177 | 623.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000668.t1 | G8A123 | 97.7 | 752 | 11 | 1 | 1 | 752 | 1 | 746 | 0.0e+00 | 1447.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene000668 | MS.gene045327 | PPI |
| MS.gene75647 | MS.gene000668 | PPI |
| MS.gene79918 | MS.gene000668 | PPI |
| MS.gene022779 | MS.gene000668 | PPI |
| MS.gene77559 | MS.gene000668 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000668.t1 | MTR_1g105605 | 97.872 | 752 | 10 | 1 | 1 | 752 | 1 | 746 | 0.0 | 1521 |
| MS.gene000668.t1 | MTR_3g084740 | 43.912 | 772 | 395 | 13 | 7 | 751 | 10 | 770 | 0.0 | 650 |
| MS.gene000668.t1 | MTR_8g011270 | 42.564 | 780 | 398 | 11 | 2 | 751 | 4 | 763 | 0.0 | 635 |
| MS.gene000668.t1 | MTR_3g084740 | 42.174 | 690 | 363 | 12 | 7 | 671 | 10 | 688 | 0.0 | 555 |
| MS.gene000668.t1 | MTR_6g452530 | 52.414 | 145 | 58 | 2 | 533 | 667 | 11 | 154 | 1.32e-42 | 152 |
| MS.gene000668.t1 | MTR_6g452520 | 52.414 | 145 | 58 | 2 | 533 | 667 | 11 | 154 | 1.58e-42 | 153 |
| MS.gene000668.t1 | MTR_6g452510 | 52.414 | 145 | 58 | 2 | 533 | 667 | 11 | 154 | 1.58e-42 | 153 |
| MS.gene000668.t1 | MTR_3g083830 | 41.350 | 237 | 63 | 8 | 236 | 470 | 32 | 194 | 1.77e-36 | 136 |
| MS.gene000668.t1 | MTR_7g110640 | 22.301 | 704 | 458 | 22 | 34 | 717 | 164 | 798 | 6.38e-22 | 102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000668.t1 | AT5G43670 | 61.104 | 797 | 262 | 8 | 1 | 752 | 1 | 794 | 0.0 | 1012 |
| MS.gene000668.t1 | AT3G23660 | 44.444 | 765 | 399 | 11 | 5 | 751 | 8 | 764 | 0.0 | 663 |
| MS.gene000668.t1 | AT3G23660 | 43.236 | 791 | 397 | 13 | 5 | 751 | 8 | 790 | 0.0 | 651 |
| MS.gene000668.t1 | AT1G05520 | 42.455 | 782 | 416 | 11 | 1 | 751 | 4 | 782 | 0.0 | 639 |
| MS.gene000668.t1 | AT4G14160 | 42.727 | 770 | 408 | 11 | 4 | 751 | 13 | 771 | 0.0 | 630 |
| MS.gene000668.t1 | AT4G14160 | 42.542 | 771 | 409 | 11 | 4 | 751 | 13 | 772 | 0.0 | 629 |
| MS.gene000668.t1 | AT2G21630 | 42.638 | 781 | 395 | 10 | 2 | 751 | 3 | 761 | 0.0 | 599 |
| MS.gene000668.t1 | AT4G14160 | 38.731 | 599 | 336 | 10 | 4 | 582 | 13 | 600 | 3.76e-140 | 426 |
| MS.gene000668.t1 | AT4G01810 | 22.511 | 693 | 446 | 19 | 51 | 717 | 200 | 827 | 6.16e-24 | 108 |
| MS.gene000668.t1 | AT4G01810 | 22.511 | 693 | 446 | 19 | 51 | 717 | 200 | 827 | 6.16e-24 | 108 |
| MS.gene000668.t1 | AT4G01810 | 22.511 | 693 | 446 | 19 | 51 | 717 | 200 | 827 | 6.16e-24 | 108 |
Find 195 sgRNAs with CRISPR-Local
Find 237 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAGCCCAGCTCTGCATTTA+TGG | 0.146142 | 1.4:-81314456 | MS.gene000668:CDS |
| TCCTTAGGTGGAACATAAAT+TGG | 0.153708 | 1.4:+81314141 | None:intergenic |
| TTCCTTGTGGTGATCCATTA+TGG | 0.166108 | 1.4:-81313915 | MS.gene000668:CDS |
| ACTAATGATGTCAAAATTTC+TGG | 0.170175 | 1.4:-81314632 | MS.gene000668:CDS |
| CATTTGAATCCGATCAATTT+AGG | 0.188915 | 1.4:-81314739 | MS.gene000668:CDS |
| CTAAACTCACATTCTGAAAT+TGG | 0.225580 | 1.4:+81315169 | None:intergenic |
| CTGATGAAACTGCGTATTTC+CGG | 0.234643 | 1.4:-81314085 | MS.gene000668:CDS |
| TGTTCCAAAACAGGGATTTC+TGG | 0.241058 | 1.4:-81315194 | MS.gene000668:CDS |
| AGAATCATGGTATTCACTTC+TGG | 0.244413 | 1.4:-81315013 | MS.gene000668:CDS |
| TCCTTGTGGTGATCCATTAT+GGG | 0.259198 | 1.4:-81313914 | MS.gene000668:CDS |
| GGAACCAGAAATCCCTGTTT+TGG | 0.272568 | 1.4:+81315190 | None:intergenic |
| CTTCTTCCACTGAGCAATCT+TGG | 0.278201 | 1.4:+81313890 | None:intergenic |
| TTCTAAAATTCTCATGGTTT+GGG | 0.281291 | 1.4:+81313850 | None:intergenic |
| GGAACATAAATTGGGGATAA+AGG | 0.283463 | 1.4:+81314150 | None:intergenic |
| GTGTAGGTTGAATCATTATA+AGG | 0.283660 | 1.4:+81314030 | None:intergenic |
| TCGATTATCAATCACGTATC+TGG | 0.284665 | 1.4:-81316339 | MS.gene000668:CDS |
| CATAATGGATTTCGTTGAAT+TGG | 0.291830 | 1.4:-81316545 | None:intergenic |
| TGTTAGAGACATCAATAAAT+TGG | 0.296694 | 1.4:+81314114 | None:intergenic |
| TTTCTAAAATTCTCATGGTT+TGG | 0.298952 | 1.4:+81313849 | None:intergenic |
| GTCAAAATTTCTGGAGCTCT+TGG | 0.335108 | 1.4:-81314623 | MS.gene000668:CDS |
| TCTAGACCAATTGCAGATAC+TGG | 0.336657 | 1.4:-81313628 | MS.gene000668:CDS |
| AGGGATTGTTAGGTCTGATT+TGG | 0.339917 | 1.4:+81316474 | None:intergenic |
| CTAGATCTTGCAGTTTCTAT+AGG | 0.340834 | 1.4:-81314892 | MS.gene000668:CDS |
| CGGAAGGAAGAAGGATCTTC+TGG | 0.343028 | 1.4:+81314191 | None:intergenic |
| AGGTCTGATTTGGTTGTTGA+TGG | 0.354224 | 1.4:+81316484 | None:intergenic |
| AACTGTTCTGCATCCAGTTC+TGG | 0.361114 | 1.4:+81313813 | None:intergenic |
| GAGCAATCTTGGACCCATAA+TGG | 0.371953 | 1.4:+81313901 | None:intergenic |
| CACATAGTCCCCAAACTTAG+AGG | 0.376203 | 1.4:+81314214 | None:intergenic |
| AACACAGCCTGTTCCAAAAC+AGG | 0.376787 | 1.4:-81315203 | MS.gene000668:CDS |
| TGGTTCGGATATCATCTTTA+CGG | 0.381108 | 1.4:-81313673 | MS.gene000668:CDS |
| TGATGGTTAGAGGGATTGTT+AGG | 0.382749 | 1.4:+81316464 | None:intergenic |
| GTGGCCCATCAAACGAATAT+TGG | 0.386146 | 1.4:+81314003 | None:intergenic |
| GTACCTGATCGGAAGAAAAT+TGG | 0.386477 | 1.4:+81315963 | None:intergenic |
| GTTGAATTGGAGGCAGTAGA+AGG | 0.388619 | 1.4:-81316532 | MS.gene000668:CDS |
| CCTTAGGTGGAACATAAATT+GGG | 0.391307 | 1.4:+81314142 | None:intergenic |
| ACTTCTGGGCCTGCTACTCT+TGG | 0.397015 | 1.4:-81314998 | MS.gene000668:CDS |
| TTTGATTACGTTTGATTCCA+TGG | 0.403247 | 1.4:-81316047 | MS.gene000668:CDS |
| GAATCATGGTATTCACTTCT+GGG | 0.404127 | 1.4:-81315012 | MS.gene000668:CDS |
| AAAGCAACAAGAGCAGTATC+AGG | 0.409675 | 1.4:+81316067 | None:intergenic |
| CGGAAATACGCAGTTTCATC+AGG | 0.417657 | 1.4:+81314086 | None:intergenic |
| TTCATTCTACGTATAACTTC+AGG | 0.419580 | 1.4:-81315123 | MS.gene000668:CDS |
| CTGAACCATAAATGCAGAGC+TGG | 0.420001 | 1.4:+81314451 | None:intergenic |
| TTGCAGCTCCAGTGGACCTC+AGG | 0.420486 | 1.4:+81315086 | None:intergenic |
| GAACATAAATTGGGGATAAA+GGG | 0.420979 | 1.4:+81314151 | None:intergenic |
| AGAACAGTTGGTGGCTGAAC+GGG | 0.425965 | 1.4:-81313799 | MS.gene000668:CDS |
| CAATAAATTGGGATCTCCTT+AGG | 0.428237 | 1.4:+81314126 | None:intergenic |
| GCTGTTGGAAGCTCCAGAAC+TGG | 0.430961 | 1.4:-81313826 | MS.gene000668:CDS |
| TGAGCGCTCGGGTGGATTTG+TGG | 0.435162 | 1.4:-81314774 | MS.gene000668:CDS |
| CAAGATAGAATCGGGGCAAA+TGG | 0.435352 | 1.4:+81313953 | None:intergenic |
| ATTAGTAGTCACTATTTCAA+TGG | 0.435439 | 1.4:+81314649 | None:intergenic |
| GGTGTGGACGGCTAATGTTT+AGG | 0.443719 | 1.4:+81315242 | None:intergenic |
| TCCGTTGGTCATGGAATTCA+TGG | 0.445862 | 1.4:-81316507 | MS.gene000668:CDS |
| AAATCCACCCGAGCGCTCAA+TGG | 0.446015 | 1.4:+81314778 | None:intergenic |
| GCACTGCCAGTATCTGCAAT+TGG | 0.447846 | 1.4:+81313622 | None:intergenic |
| ATGCCCGTGATGTTGTTAGA+TGG | 0.450547 | 1.4:-81314262 | MS.gene000668:CDS |
| AGAAGCAGCAGCTTCGGTTA+TGG | 0.452065 | 1.4:-81314318 | MS.gene000668:CDS |
| AGGGTTACGTTGAGAACAAA+AGG | 0.452981 | 1.4:+81316309 | None:intergenic |
| CGTAACAGATGGATTCAACT+TGG | 0.453726 | 1.4:+81313716 | None:intergenic |
| ATCAAAGAGCAAGATAGAAT+CGG | 0.454307 | 1.4:+81313944 | None:intergenic |
| TTGATCGGATTCAAATGATT+CGG | 0.454750 | 1.4:+81314745 | None:intergenic |
| GTTAGAGACATCAATAAATT+GGG | 0.455707 | 1.4:+81314115 | None:intergenic |
| CGTCCACACCAGCTGCATAC+TGG | 0.456155 | 1.4:-81315229 | MS.gene000668:CDS |
| TGATCAAGAAGCAGCAGCTT+CGG | 0.456711 | 1.4:-81314324 | MS.gene000668:CDS |
| AGCCGTCCCCTGAGGTCCAC+TGG | 0.457425 | 1.4:-81315094 | MS.gene000668:CDS |
| ACGGTACAGGCAGGGGAACA+TGG | 0.459727 | 1.4:-81314420 | MS.gene000668:CDS |
| GCTGCAATTTCAGCTGCCAT+TGG | 0.460310 | 1.4:-81315070 | MS.gene000668:CDS |
| CATTCCACAGATATTGCTGC+TGG | 0.461956 | 1.4:-81314350 | MS.gene000668:CDS |
| TGGTCACATCTTATAACCTT+TGG | 0.463433 | 1.4:+81313768 | None:intergenic |
| TATACATTTCCTAAATTGAT+CGG | 0.463943 | 1.4:+81314730 | None:intergenic |
| CCCCAAACTTAGAGGTAAAA+CGG | 0.465443 | 1.4:+81314222 | None:intergenic |
| TCAAAGAGCAAGATAGAATC+GGG | 0.465693 | 1.4:+81313945 | None:intergenic |
| TGTAGGTTGAATCATTATAA+GGG | 0.466734 | 1.4:+81314031 | None:intergenic |
| GTTTATAACACGGTACAGGC+AGG | 0.471778 | 1.4:-81314429 | MS.gene000668:CDS |
| ACACGTCTCTGCTCGGAGAA+TGG | 0.475673 | 1.4:+81314286 | None:intergenic |
| AATGTCATTGTGGGTTCTCA+TGG | 0.475832 | 1.4:+81314940 | None:intergenic |
| TTCAACATACACAGATGGTT+CGG | 0.479217 | 1.4:-81313688 | MS.gene000668:CDS |
| AATCCACCCGAGCGCTCAAT+GGG | 0.481475 | 1.4:+81314779 | None:intergenic |
| CCCATTGAAAATGTCATTGT+GGG | 0.482404 | 1.4:+81314931 | None:intergenic |
| CCCAATTTATGTTCCACCTA+AGG | 0.483319 | 1.4:-81314142 | MS.gene000668:CDS |
| TGATAATCGAGACGAGCGTA+AGG | 0.486726 | 1.4:+81316352 | None:intergenic |
| TCGAGAACCCATTGAGCGCT+CGG | 0.488153 | 1.4:-81314786 | MS.gene000668:CDS |
| AAATGCAGAGCTGGGCTGAA+TGG | 0.489105 | 1.4:+81314460 | None:intergenic |
| AATGGATTTCGTTGAATTGG+AGG | 0.489303 | 1.4:-81316542 | MS.gene000668:CDS |
| GAAGAAGCTTGGTTATGATA+AGG | 0.491651 | 1.4:-81313874 | MS.gene000668:CDS |
| CTGAACCGCGAAGGAGTAGT+TGG | 0.492465 | 1.4:-81314056 | MS.gene000668:CDS |
| TGGTCTGTTTATCACTAACT+TGG | 0.492841 | 1.4:+81314480 | None:intergenic |
| TCTACGTATAACTTCAGGTC+TGG | 0.494651 | 1.4:-81315118 | MS.gene000668:CDS |
| AGTCCAGGTCCAAGAGTAGC+AGG | 0.496349 | 1.4:+81314989 | None:intergenic |
| GTGCAGAGGAGAGGATCGTA+AGG | 0.498794 | 1.4:+81316397 | None:intergenic |
| GTGTTTGTCCAGTATGCAGC+TGG | 0.501667 | 1.4:+81315221 | None:intergenic |
| CAGCAACTCCAACTTGGTCA+AGG | 0.503030 | 1.4:+81314813 | None:intergenic |
| ACAGCTTTCTAAAATTCTCA+TGG | 0.505567 | 1.4:+81313844 | None:intergenic |
| ATGTGACCAGCATAGTAGTC+AGG | 0.507191 | 1.4:-81313754 | MS.gene000668:CDS |
| CATCTTATAACCTTTGGCAC+TGG | 0.507470 | 1.4:+81313774 | None:intergenic |
| GCTTGCTCCCTTGACCAAGT+TGG | 0.508759 | 1.4:-81314821 | MS.gene000668:CDS |
| AGAGGATCGTAAGGGAGAAG+AGG | 0.512714 | 1.4:+81316406 | None:intergenic |
| TCGGCGATGGAGCGAGGGAA+AGG | 0.512946 | 1.4:+81316289 | None:intergenic |
| TAAGTAGGAAAGAGTTCAGC+GGG | 0.512994 | 1.4:+81316256 | None:intergenic |
| ACCGTGCAAAAGAACAATCC+TGG | 0.513092 | 1.4:+81315991 | None:intergenic |
| CACCACTGCTGCACGACGAT+GGG | 0.514134 | 1.4:-81314381 | MS.gene000668:CDS |
| ATATCTAGAAGTACAGGAAT+GGG | 0.517316 | 1.4:+81313981 | None:intergenic |
| CGAGAACCCATTGAGCGCTC+GGG | 0.517565 | 1.4:-81314785 | MS.gene000668:CDS |
| TCAGAGTCCACAACGAGTCC+AGG | 0.518023 | 1.4:+81314974 | None:intergenic |
| GAACGAATATCTAGAAGTAC+AGG | 0.518525 | 1.4:+81313975 | None:intergenic |
| AATATCTAGAAGTACAGGAA+TGG | 0.522926 | 1.4:+81313980 | None:intergenic |
| GGGCCTGCTACTCTTGGACC+TGG | 0.524957 | 1.4:-81314992 | MS.gene000668:CDS |
| CTTTGATTCGTTCTTCCTTG+TGG | 0.525311 | 1.4:-81313928 | MS.gene000668:CDS |
| CGGCGATGGAGCGAGGGAAA+GGG | 0.525845 | 1.4:+81316290 | None:intergenic |
| GAAGATAAACGGAAGGAAGA+AGG | 0.526796 | 1.4:+81314182 | None:intergenic |
| TAGAAGGCCTCCGTTGGTCA+TGG | 0.530254 | 1.4:-81316516 | MS.gene000668:CDS |
| GAAGCTCAGCAACTCCAACT+TGG | 0.535939 | 1.4:+81314807 | None:intergenic |
| AACCCATCGTCGTGCAGCAG+TGG | 0.542579 | 1.4:+81314379 | None:intergenic |
| ATTGCTCAGTGGAAGAAGCT+TGG | 0.543785 | 1.4:-81313885 | MS.gene000668:CDS |
| CTCCAGTGGACCTCAGGGGA+CGG | 0.547750 | 1.4:+81315092 | None:intergenic |
| AAATGCTGGCTCTAGAATCA+TGG | 0.548937 | 1.4:-81315026 | MS.gene000668:CDS |
| TGCAGCTCCAGTGGACCTCA+GGG | 0.550418 | 1.4:+81315087 | None:intergenic |
| CGGTACAGGCAGGGGAACAT+GGG | 0.552230 | 1.4:-81314419 | MS.gene000668:CDS |
| TATTCAACAGTGGTGTAAGT+AGG | 0.553342 | 1.4:+81316241 | None:intergenic |
| TTCAGTTTATAACACGGTAC+AGG | 0.554307 | 1.4:-81314433 | MS.gene000668:CDS |
| CAGAACAGTTGGTGGCTGAA+CGG | 0.558794 | 1.4:-81313800 | MS.gene000668:CDS |
| TCAGTGCCGCGTTGAGAGAG+TGG | 0.559047 | 1.4:+81316433 | None:intergenic |
| AACGAATATTGGAAAAGTGT+AGG | 0.560902 | 1.4:+81314014 | None:intergenic |
| TCAGTGAGTGAGACCGAGGT+TGG | 0.560984 | 1.4:-81314569 | MS.gene000668:CDS |
| TCTTGGACCTGGACTCGTTG+TGG | 0.564738 | 1.4:-81314981 | MS.gene000668:CDS |
| GAACCCATTGAGCGCTCGGG+TGG | 0.564852 | 1.4:-81314782 | MS.gene000668:CDS |
| ACCTAGCCTGACTACTATGC+TGG | 0.565891 | 1.4:+81313748 | None:intergenic |
| TTATAACACGGTACAGGCAG+GGG | 0.567860 | 1.4:-81314427 | MS.gene000668:CDS |
| GGGATCCAACTACTCCTTCG+CGG | 0.568133 | 1.4:+81314051 | None:intergenic |
| TCACCACTGCTGCACGACGA+TGG | 0.569982 | 1.4:-81314382 | MS.gene000668:CDS |
| AGAACTGGATGCAGAACAGT+TGG | 0.570733 | 1.4:-81313811 | MS.gene000668:CDS |
| TTTAAACATGATGATGATGA+GGG | 0.572026 | 1.4:-81314698 | MS.gene000668:CDS |
| AGCAACTCCAACTTGGTCAA+GGG | 0.572830 | 1.4:+81314814 | None:intergenic |
| GGTGTGCACATGATGGTTAG+AGG | 0.573658 | 1.4:+81316454 | None:intergenic |
| GCCATGAATTCCATGACCAA+CGG | 0.578093 | 1.4:+81316506 | None:intergenic |
| AAAAGCAATGCAAGTTCGGT+CGG | 0.578544 | 1.4:+81314508 | None:intergenic |
| GGGAAGATTAGCGTCGGCGA+TGG | 0.578769 | 1.4:+81316276 | None:intergenic |
| CAGCAGCAATATCTGTGGAA+TGG | 0.580313 | 1.4:+81314351 | None:intergenic |
| CGGCTTATGCTGAACCGCGA+AGG | 0.581017 | 1.4:-81314065 | MS.gene000668:CDS |
| AGCTGAAATTGCAGCTCCAG+TGG | 0.583120 | 1.4:+81315078 | None:intergenic |
| TGAACCATAAATGCAGAGCT+GGG | 0.583186 | 1.4:+81314452 | None:intergenic |
| TAGCGTCGGCGATGGAGCGA+GGG | 0.583880 | 1.4:+81316284 | None:intergenic |
| TTTATAACACGGTACAGGCA+GGG | 0.591863 | 1.4:-81314428 | MS.gene000668:CDS |
| TTAGCGTCGGCGATGGAGCG+AGG | 0.595860 | 1.4:+81316283 | None:intergenic |
| TGAACGGGTTCCAGTGCCAA+AGG | 0.596266 | 1.4:-81313784 | MS.gene000668:CDS |
| AAAATTTGAAGATAAACGGA+AGG | 0.596325 | 1.4:+81314175 | None:intergenic |
| GGGCATGACACGTCTCTGCT+CGG | 0.596609 | 1.4:+81314279 | None:intergenic |
| GCCCATTGAAAATGTCATTG+TGG | 0.599300 | 1.4:+81314930 | None:intergenic |
| CAGTATGCAGCTGGTGTGGA+CGG | 0.601268 | 1.4:+81315230 | None:intergenic |
| GTTTAAACATGATGATGATG+AGG | 0.601853 | 1.4:-81314699 | MS.gene000668:CDS |
| GGTACCACCTTGTCCAACCT+CGG | 0.602216 | 1.4:+81314556 | None:intergenic |
| TAAATTGGGATCTCCTTAGG+TGG | 0.605088 | 1.4:+81314129 | None:intergenic |
| AAGCCATCTAACAACATCAC+GGG | 0.606998 | 1.4:+81314259 | None:intergenic |
| GATCGTAAGGGAGAAGAGGT+AGG | 0.607864 | 1.4:+81316410 | None:intergenic |
| GATAATCGAGACGAGCGTAA+GGG | 0.611343 | 1.4:+81316353 | None:intergenic |
| ATTAATTGGAGGTACCTGAT+CGG | 0.612531 | 1.4:+81315952 | None:intergenic |
| ATTCCACAGATATTGCTGCT+GGG | 0.613853 | 1.4:-81314349 | MS.gene000668:CDS |
| CGGCGCCGCATCGAGTGCAG+AGG | 0.614220 | 1.4:+81316383 | None:intergenic |
| CAAAATTCAACATACACAGA+TGG | 0.616886 | 1.4:-81313693 | MS.gene000668:CDS |
| GACAAGGTGGTACCTGCGTG+TGG | 0.618247 | 1.4:-81314547 | MS.gene000668:CDS |
| AATATCATGAAGATAAACCA+TGG | 0.621259 | 1.4:+81316030 | None:intergenic |
| ACGAGCGTAAGGGTTTAAAA+CGG | 0.624354 | 1.4:+81316363 | None:intergenic |
| ACTGGATGCAGAACAGTTGG+TGG | 0.626186 | 1.4:-81313808 | MS.gene000668:CDS |
| CCGCATCGAGTGCAGAGGAG+AGG | 0.628258 | 1.4:+81316388 | None:intergenic |
| AGTGAGACCGAGGTTGGACA+AGG | 0.628463 | 1.4:-81314563 | MS.gene000668:CDS |
| CGCTTCAGTGAGTGAGACCG+AGG | 0.630186 | 1.4:-81314573 | MS.gene000668:CDS |
| GGGTTACGTTGAGAACAAAA+GGG | 0.630742 | 1.4:+81316310 | None:intergenic |
| TTGCAGATACTGGCAGTGCA+AGG | 0.631681 | 1.4:-81313618 | MS.gene000668:CDS |
| CTTCGCGGTTCAGCATAAGC+CGG | 0.634012 | 1.4:+81314066 | None:intergenic |
| GGTCTGGAAGCCGTCCCCTG+AGG | 0.637822 | 1.4:-81315102 | MS.gene000668:CDS |
| AGGCAGTAGAAGGCCTCCGT+TGG | 0.638703 | 1.4:-81316522 | MS.gene000668:CDS |
| ACAACACTCTAAAAGACCAA+TGG | 0.640553 | 1.4:+81315054 | None:intergenic |
| AGAGAGTGGTGTGCACATGA+TGG | 0.640666 | 1.4:+81316447 | None:intergenic |
| CTTAGGTGGAACATAAATTG+GGG | 0.641068 | 1.4:+81314143 | None:intergenic |
| CAAGCCATCTAACAACATCA+CGG | 0.645432 | 1.4:+81314258 | None:intergenic |
| GTGTGCACATGATGGTTAGA+GGG | 0.648276 | 1.4:+81316455 | None:intergenic |
| TTCAGCGGGAAGATTAGCGT+CGG | 0.651769 | 1.4:+81316270 | None:intergenic |
| TGCAGAGGAGAGGATCGTAA+GGG | 0.656194 | 1.4:+81316398 | None:intergenic |
| AAACCCAGCAGCAATATCTG+TGG | 0.656981 | 1.4:+81314346 | None:intergenic |
| AGAAGAAGAGTATTCAACAG+TGG | 0.657516 | 1.4:+81316231 | None:intergenic |
| TCTAGAAGTACAGGAATGGG+TGG | 0.661190 | 1.4:+81313984 | None:intergenic |
| ACACAGCCTGTTCCAAAACA+GGG | 0.661300 | 1.4:-81315202 | MS.gene000668:CDS |
| ACCAGCATAGTAGTCAGGCT+AGG | 0.662465 | 1.4:-81313749 | MS.gene000668:CDS |
| ATGAATTCCATGACCAACGG+AGG | 0.664818 | 1.4:+81316509 | None:intergenic |
| TGTCCAGTATGCAGCTGGTG+TGG | 0.665544 | 1.4:+81315226 | None:intergenic |
| ACCCATAATGGATCACCACA+AGG | 0.667206 | 1.4:+81313913 | None:intergenic |
| TTATGGTTCAGTTTATAACA+CGG | 0.670322 | 1.4:-81314439 | MS.gene000668:CDS |
| CCTCTCCTCTGCACTCGATG+CGG | 0.680345 | 1.4:-81316388 | MS.gene000668:CDS |
| TGTATTCAACTTCCACACGC+AGG | 0.686684 | 1.4:+81314535 | None:intergenic |
| TCTATAGGCAGATTGCGAAG+AGG | 0.694661 | 1.4:-81314877 | MS.gene000668:CDS |
| GAGACCGAGGTTGGACAAGG+TGG | 0.712733 | 1.4:-81314560 | MS.gene000668:CDS |
| CAAAGAGCAAGATAGAATCG+GGG | 0.712881 | 1.4:+81313946 | None:intergenic |
| GTAAGTAGGAAAGAGTTCAG+CGG | 0.716936 | 1.4:+81316255 | None:intergenic |
| GCAGCTCCAGTGGACCTCAG+GGG | 0.738622 | 1.4:+81315088 | None:intergenic |
| ATGGGTCCAAGATTGCTCAG+TGG | 0.775938 | 1.4:-81313896 | MS.gene000668:CDS |
| TGCACACCACTCTCTCAACG+CGG | 0.808428 | 1.4:-81316439 | MS.gene000668:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTAATTTTACATTAAATTTG+AGG | - | chr1.4:81314747-81314766 | MS.gene000668:CDS | 15.0% |
| !! | TATACATTTCCTAAATTGAT+CGG | + | chr1.4:81315428-81315447 | None:intergenic | 20.0% |
| !! | TATGGCTCAAATAAAATAAT+CGG | + | chr1.4:81314583-81314602 | None:intergenic | 20.0% |
| ! | AAAATTTGAAGATAAACGGA+AGG | + | chr1.4:81315983-81316002 | None:intergenic | 25.0% |
| ! | AATATCATGAAGATAAACCA+TGG | + | chr1.4:81314128-81314147 | None:intergenic | 25.0% |
| ! | ACTAATGATGTCAAAATTTC+TGG | - | chr1.4:81315523-81315542 | MS.gene000668:intron | 25.0% |
| ! | ATAACAGTGTATGAATGAAA+AGG | + | chr1.4:81314231-81314250 | None:intergenic | 25.0% |
| ! | ATTAGTAGTCACTATTTCAA+TGG | + | chr1.4:81315509-81315528 | None:intergenic | 25.0% |
| ! | GGGAAAAATTTGAAGATAAA+CGG | + | chr1.4:81315987-81316006 | None:intergenic | 25.0% |
| ! | GTTAGAGACATCAATAAATT+GGG | + | chr1.4:81316043-81316062 | None:intergenic | 25.0% |
| ! | TAGCTTATGAAAACAACTTA+TGG | + | chr1.4:81314601-81314620 | None:intergenic | 25.0% |
| ! | TGAATGAAAAGGTGATTAAT+TGG | + | chr1.4:81314220-81314239 | None:intergenic | 25.0% |
| ! | TGGATAAACAACTTCATTAA+GGG | - | chr1.4:81314499-81314518 | MS.gene000668:CDS | 25.0% |
| ! | TGTTAGAGACATCAATAAAT+TGG | + | chr1.4:81316044-81316063 | None:intergenic | 25.0% |
| ! | TTATGGTTCAGTTTATAACA+CGG | - | chr1.4:81315716-81315735 | MS.gene000668:intron | 25.0% |
| ! | TTGGATAAACAACTTCATTA+AGG | - | chr1.4:81314498-81314517 | MS.gene000668:CDS | 25.0% |
| !! | TGTAGGTTGAATCATTATAA+GGG | + | chr1.4:81316127-81316146 | None:intergenic | 25.0% |
| !! | TTTAAACATGATGATGATGA+GGG | - | chr1.4:81315457-81315476 | MS.gene000668:intron | 25.0% |
| !! | TTTTCCAATATTCGTTTGAT+GGG | - | chr1.4:81316148-81316167 | MS.gene000668:CDS | 25.0% |
| !!! | TTCTAAAATTCTCATGGTTT+GGG | + | chr1.4:81316308-81316327 | None:intergenic | 25.0% |
| !!! | TTTCTAAAATTCTCATGGTT+TGG | + | chr1.4:81316309-81316328 | None:intergenic | 25.0% |
| !!! | TTTTTTTTGTCTCTCAGATA+CGG | - | chr1.4:81314885-81314904 | MS.gene000668:CDS | 25.0% |
| AACAAGCTGAAAACAACTTA+TGG | - | chr1.4:81314639-81314658 | MS.gene000668:CDS | 30.0% | |
| AGAAAAAAGCAATGCAAGTT+CGG | + | chr1.4:81315654-81315673 | None:intergenic | 30.0% | |
| ATCAAAGAGCAAGATAGAAT+CGG | + | chr1.4:81316214-81316233 | None:intergenic | 30.0% | |
| ATGAAAAGGTGATTAATTGG+AGG | + | chr1.4:81314217-81314236 | None:intergenic | 30.0% | |
| ATTAATGCAAGATGTTCTCT+AGG | - | chr1.4:81314355-81314374 | MS.gene000668:CDS | 30.0% | |
| ATTACAAAAACAAAAGCAGG+AGG | + | chr1.4:81313998-81314017 | None:intergenic | 30.0% | |
| CAAAATTCAACATACACAGA+TGG | - | chr1.4:81316462-81316481 | MS.gene000668:CDS | 30.0% | |
| CATTTGAATCCGATCAATTT+AGG | - | chr1.4:81315416-81315435 | MS.gene000668:intron | 30.0% | |
| GAACATAAATTGGGGATAAA+GGG | + | chr1.4:81316007-81316026 | None:intergenic | 30.0% | |
| GTAATAATCAATCAGTACTC+TGG | - | chr1.4:81314449-81314468 | MS.gene000668:CDS | 30.0% | |
| TCGATTACAAAAACAAAAGC+AGG | + | chr1.4:81314001-81314020 | None:intergenic | 30.0% | |
| TTCATTCTACGTATAACTTC+AGG | - | chr1.4:81315032-81315051 | MS.gene000668:CDS | 30.0% | |
| TTGATCGGATTCAAATGATT+CGG | + | chr1.4:81315413-81315432 | None:intergenic | 30.0% | |
| TTTGATTACGTTTGATTCCA+TGG | - | chr1.4:81314108-81314127 | MS.gene000668:CDS | 30.0% | |
| ! | AACGAATATTGGAAAAGTGT+AGG | + | chr1.4:81316144-81316163 | None:intergenic | 30.0% |
| ! | AATATCTAGAAGTACAGGAA+TGG | + | chr1.4:81316178-81316197 | None:intergenic | 30.0% |
| ! | ATATCTAGAAGTACAGGAAT+GGG | + | chr1.4:81316177-81316196 | None:intergenic | 30.0% |
| ! | CTTTTCCAATATTCGTTTGA+TGG | - | chr1.4:81316147-81316166 | MS.gene000668:CDS | 30.0% |
| ! | GTGTAGGTTGAATCATTATA+AGG | + | chr1.4:81316128-81316147 | None:intergenic | 30.0% |
| ! | GTTTAAACATGATGATGATG+AGG | - | chr1.4:81315456-81315475 | MS.gene000668:intron | 30.0% |
| !! | ACAGCTTTCTAAAATTCTCA+TGG | + | chr1.4:81316314-81316333 | None:intergenic | 30.0% |
| !! | CTAAACTCACATTCTGAAAT+TGG | + | chr1.4:81314989-81315008 | None:intergenic | 30.0% |
| !! | TGAGAATTTTAGAAAGCTGT+TGG | - | chr1.4:81316314-81316333 | MS.gene000668:CDS | 30.0% |
| !!! | TTTTTTCTAAGAGACATGCA+AGG | + | chr1.4:81315559-81315578 | None:intergenic | 30.0% |
| AGAATCATGGTATTCACTTC+TGG | - | chr1.4:81315142-81315161 | MS.gene000668:CDS | 35.0% | |
| CAATAAATTGGGATCTCCTT+AGG | + | chr1.4:81316032-81316051 | None:intergenic | 35.0% | |
| CCCATTGAAAATGTCATTGT+GGG | + | chr1.4:81315227-81315246 | None:intergenic | 35.0% | |
| CCTTAGGTGGAACATAAATT+GGG | + | chr1.4:81316016-81316035 | None:intergenic | 35.0% | |
| CTAGATCTTGCAGTTTCTAT+AGG | - | chr1.4:81315263-81315282 | MS.gene000668:intron | 35.0% | |
| CTTAGGTGGAACATAAATTG+GGG | + | chr1.4:81316015-81316034 | None:intergenic | 35.0% | |
| CTTCACACTTAGACATTGTT+TGG | - | chr1.4:81314479-81314498 | MS.gene000668:CDS | 35.0% | |
| GAAGAAGCTTGGTTATGATA+AGG | - | chr1.4:81316281-81316300 | MS.gene000668:CDS | 35.0% | |
| GAATCATGGTATTCACTTCT+GGG | - | chr1.4:81315143-81315162 | MS.gene000668:CDS | 35.0% | |
| GGAACATAAATTGGGGATAA+AGG | + | chr1.4:81316008-81316027 | None:intergenic | 35.0% | |
| TATTCAACAGTGGTGTAAGT+AGG | + | chr1.4:81313917-81313936 | None:intergenic | 35.0% | |
| TCAAAGAGCAAGATAGAATC+GGG | + | chr1.4:81316213-81316232 | None:intergenic | 35.0% | |
| TCCTTAGGTGGAACATAAAT+TGG | + | chr1.4:81316017-81316036 | None:intergenic | 35.0% | |
| TCGATTATCAATCACGTATC+TGG | - | chr1.4:81313816-81313835 | MS.gene000668:CDS | 35.0% | |
| TCTCAACTAAGTAACTAAGC+TGG | + | chr1.4:81314778-81314797 | None:intergenic | 35.0% | |
| TGGTCACATCTTATAACCTT+TGG | + | chr1.4:81316390-81316409 | None:intergenic | 35.0% | |
| TGGTCTGTTTATCACTAACT+TGG | + | chr1.4:81315678-81315697 | None:intergenic | 35.0% | |
| TTCAACATACACAGATGGTT+CGG | - | chr1.4:81316467-81316486 | MS.gene000668:CDS | 35.0% | |
| TTCAGTTTATAACACGGTAC+AGG | - | chr1.4:81315722-81315741 | MS.gene000668:intron | 35.0% | |
| ! | ACAACACTCTAAAAGACCAA+TGG | + | chr1.4:81315104-81315123 | None:intergenic | 35.0% |
| ! | ACCCACAATGACATTTTCAA+TGG | - | chr1.4:81315223-81315242 | MS.gene000668:CDS | 35.0% |
| ! | ATCCGTTTTACCTCTAAGTT+TGG | - | chr1.4:81315931-81315950 | MS.gene000668:intron | 35.0% |
| ! | CCCACAATGACATTTTCAAT+GGG | - | chr1.4:81315224-81315243 | MS.gene000668:CDS | 35.0% |
| ! | GAACGAATATCTAGAAGTAC+AGG | + | chr1.4:81316183-81316202 | None:intergenic | 35.0% |
| ! | GTTGAATTTTGCGTAACAGA+TGG | + | chr1.4:81316453-81316472 | None:intergenic | 35.0% |
| ! | TCCGTTTTACCTCTAAGTTT+GGG | - | chr1.4:81315932-81315951 | MS.gene000668:intron | 35.0% |
| ! | TGGTTCGGATATCATCTTTA+CGG | - | chr1.4:81316482-81316501 | MS.gene000668:CDS | 35.0% |
| !! | AGAAGAAGAGTATTCAACAG+TGG | + | chr1.4:81313927-81313946 | None:intergenic | 35.0% |
| !! | ATTAATTGGAGGTACCTGAT+CGG | + | chr1.4:81314206-81314225 | None:intergenic | 35.0% |
| !! | GTTGTTTTCATAAGCTATCC+TGG | - | chr1.4:81314604-81314623 | MS.gene000668:CDS | 35.0% |
| !!! | GAGTGTTGTTTTGTAAATGC+TGG | - | chr1.4:81315115-81315134 | MS.gene000668:CDS | 35.0% |
| AAAAGCAATGCAAGTTCGGT+CGG | + | chr1.4:81315650-81315669 | None:intergenic | 40.0% | |
| AAAGCAACAAGAGCAGTATC+AGG | + | chr1.4:81314091-81314110 | None:intergenic | 40.0% | |
| AACTACCTGTCTAAGGACAT+AGG | + | chr1.4:81314692-81314711 | None:intergenic | 40.0% | |
| AAGCCATCTAACAACATCAC+GGG | + | chr1.4:81315899-81315918 | None:intergenic | 40.0% | |
| AATGTCATTGTGGGTTCTCA+TGG | + | chr1.4:81315218-81315237 | None:intergenic | 40.0% | |
| ACGAGCGTAAGGGTTTAAAA+CGG | + | chr1.4:81313795-81313814 | None:intergenic | 40.0% | |
| ACTACCTGTCTAAGGACATA+GGG | + | chr1.4:81314691-81314710 | None:intergenic | 40.0% | |
| AGGGATTGTTAGGTCTGATT+TGG | + | chr1.4:81313684-81313703 | None:intergenic | 40.0% | |
| AGGGTTACGTTGAGAACAAA+AGG | + | chr1.4:81313849-81313868 | None:intergenic | 40.0% | |
| ATTCCACAGATATTGCTGCT+GGG | - | chr1.4:81315806-81315825 | MS.gene000668:intron | 40.0% | |
| CAAAGAGCAAGATAGAATCG+GGG | + | chr1.4:81316212-81316231 | None:intergenic | 40.0% | |
| CAAGCCATCTAACAACATCA+CGG | + | chr1.4:81315900-81315919 | None:intergenic | 40.0% | |
| CATCTTATAACCTTTGGCAC+TGG | + | chr1.4:81316384-81316403 | None:intergenic | 40.0% | |
| CCCAATTTATGTTCCACCTA+AGG | - | chr1.4:81316013-81316032 | MS.gene000668:CDS | 40.0% | |
| CCCCAAACTTAGAGGTAAAA+CGG | + | chr1.4:81315936-81315955 | None:intergenic | 40.0% | |
| CCTAACTAACTACCTGTCTA+AGG | + | chr1.4:81314699-81314718 | None:intergenic | 40.0% | |
| CCTTAGACAGGTAGTTAGTT+AGG | - | chr1.4:81314696-81314715 | MS.gene000668:CDS | 40.0% | |
| CTGATGAAACTGCGTATTTC+CGG | - | chr1.4:81316070-81316089 | MS.gene000668:CDS | 40.0% | |
| GAAGATAAACGGAAGGAAGA+AGG | + | chr1.4:81315976-81315995 | None:intergenic | 40.0% | |
| GCCCATTGAAAATGTCATTG+TGG | + | chr1.4:81315228-81315247 | None:intergenic | 40.0% | |
| GGGTTACGTTGAGAACAAAA+GGG | + | chr1.4:81313848-81313867 | None:intergenic | 40.0% | |
| GTAAGTAGGAAAGAGTTCAG+CGG | + | chr1.4:81313903-81313922 | None:intergenic | 40.0% | |
| GTACCTGATCGGAAGAAAAT+TGG | + | chr1.4:81314195-81314214 | None:intergenic | 40.0% | |
| TAAATTGGGATCTCCTTAGG+TGG | + | chr1.4:81316029-81316048 | None:intergenic | 40.0% | |
| TAAGTAGGAAAGAGTTCAGC+GGG | + | chr1.4:81313902-81313921 | None:intergenic | 40.0% | |
| TAGACAGGTAGTTAGTTAGG+TGG | - | chr1.4:81314699-81314718 | MS.gene000668:CDS | 40.0% | |
| TCCTTGTGGTGATCCATTAT+GGG | - | chr1.4:81316241-81316260 | MS.gene000668:CDS | 40.0% | |
| TCTACGTATAACTTCAGGTC+TGG | - | chr1.4:81315037-81315056 | MS.gene000668:CDS | 40.0% | |
| TCTAGACCAATTGCAGATAC+TGG | - | chr1.4:81316527-81316546 | MS.gene000668:CDS | 40.0% | |
| TGAACCATAAATGCAGAGCT+GGG | + | chr1.4:81315706-81315725 | None:intergenic | 40.0% | |
| TGATGGTTAGAGGGATTGTT+AGG | + | chr1.4:81313694-81313713 | None:intergenic | 40.0% | |
| TGTTCCAAAACAGGGATTTC+TGG | - | chr1.4:81314961-81314980 | MS.gene000668:CDS | 40.0% | |
| TTCCTTGTGGTGATCCATTA+TGG | - | chr1.4:81316240-81316259 | MS.gene000668:CDS | 40.0% | |
| TTTATAACACGGTACAGGCA+GGG | - | chr1.4:81315727-81315746 | MS.gene000668:intron | 40.0% | |
| ! | ACACCAATTTTCTTCCGATC+AGG | - | chr1.4:81314189-81314208 | MS.gene000668:CDS | 40.0% |
| ! | CAATGACATTTTCAATGGGC+AGG | - | chr1.4:81315228-81315247 | MS.gene000668:CDS | 40.0% |
| ! | CCGTTTTACCTCTAAGTTTG+GGG | - | chr1.4:81315933-81315952 | MS.gene000668:intron | 40.0% |
| ! | CGTAACAGATGGATTCAACT+TGG | + | chr1.4:81316442-81316461 | None:intergenic | 40.0% |
| ! | CTTTGATTCGTTCTTCCTTG+TGG | - | chr1.4:81316227-81316246 | MS.gene000668:CDS | 40.0% |
| ! | TCCAGGATTGTTCTTTTGCA+CGG | - | chr1.4:81314163-81314182 | MS.gene000668:CDS | 40.0% |
| ! | TCGTTGTGGACTCTGATTTT+CGG | - | chr1.4:81315188-81315207 | MS.gene000668:CDS | 40.0% |
| ! | TTCAGTTTTCTCACTGTTCC+AGG | - | chr1.4:81314146-81314165 | MS.gene000668:CDS | 40.0% |
| !! | AAATGCTGGCTCTAGAATCA+TGG | - | chr1.4:81315129-81315148 | MS.gene000668:CDS | 40.0% |
| !! | AGGTCTGATTTGGTTGTTGA+TGG | + | chr1.4:81313674-81313693 | None:intergenic | 40.0% |
| !! | GTCAAAATTTCTGGAGCTCT+TGG | - | chr1.4:81315532-81315551 | MS.gene000668:intron | 40.0% |
| !!! | AGAAATCCCTGTTTTGGAAC+AGG | + | chr1.4:81314962-81314981 | None:intergenic | 40.0% |
| AAACCCAGCAGCAATATCTG+TGG | + | chr1.4:81315812-81315831 | None:intergenic | 45.0% | |
| AACACAGCCTGTTCCAAAAC+AGG | - | chr1.4:81314952-81314971 | MS.gene000668:CDS | 45.0% | |
| AACTGTTCTGCATCCAGTTC+TGG | + | chr1.4:81316345-81316364 | None:intergenic | 45.0% | |
| ACACAGCCTGTTCCAAAACA+GGG | - | chr1.4:81314953-81314972 | MS.gene000668:CDS | 45.0% | |
| ACCGTGCAAAAGAACAATCC+TGG | + | chr1.4:81314167-81314186 | None:intergenic | 45.0% | |
| AGAACTGGATGCAGAACAGT+TGG | - | chr1.4:81316344-81316363 | MS.gene000668:CDS | 45.0% | |
| AGCAACTCCAACTTGGTCAA+GGG | + | chr1.4:81315344-81315363 | None:intergenic | 45.0% | |
| ATGAATTCCATGACCAACGG+AGG | + | chr1.4:81313649-81313668 | None:intergenic | 45.0% | |
| ATGCCCGTGATGTTGTTAGA+TGG | - | chr1.4:81315893-81315912 | MS.gene000668:intron | 45.0% | |
| ATGTGACCAGCATAGTAGTC+AGG | - | chr1.4:81316401-81316420 | MS.gene000668:CDS | 45.0% | |
| ATTGCTCAGTGGAAGAAGCT+TGG | - | chr1.4:81316270-81316289 | MS.gene000668:CDS | 45.0% | |
| CAAGATAGAATCGGGGCAAA+TGG | + | chr1.4:81316205-81316224 | None:intergenic | 45.0% | |
| CACATAGTCCCCAAACTTAG+AGG | + | chr1.4:81315944-81315963 | None:intergenic | 45.0% | |
| CAGCAGCAATATCTGTGGAA+TGG | + | chr1.4:81315807-81315826 | None:intergenic | 45.0% | |
| CATTCCACAGATATTGCTGC+TGG | - | chr1.4:81315805-81315824 | MS.gene000668:intron | 45.0% | |
| CGGAAATACGCAGTTTCATC+AGG | + | chr1.4:81316072-81316091 | None:intergenic | 45.0% | |
| CTGAACCATAAATGCAGAGC+TGG | + | chr1.4:81315707-81315726 | None:intergenic | 45.0% | |
| CTTCTTCCACTGAGCAATCT+TGG | + | chr1.4:81316268-81316287 | None:intergenic | 45.0% | |
| GAGCAATCTTGGACCCATAA+TGG | + | chr1.4:81316257-81316276 | None:intergenic | 45.0% | |
| GATAATCGAGACGAGCGTAA+GGG | + | chr1.4:81313805-81313824 | None:intergenic | 45.0% | |
| GCCATGAATTCCATGACCAA+CGG | + | chr1.4:81313652-81313671 | None:intergenic | 45.0% | |
| GTGGCCCATCAAACGAATAT+TGG | + | chr1.4:81316155-81316174 | None:intergenic | 45.0% | |
| GTGTGCACATGATGGTTAGA+GGG | + | chr1.4:81313703-81313722 | None:intergenic | 45.0% | |
| GTTGAATTGGAGGCAGTAGA+AGG | - | chr1.4:81313623-81313642 | MS.gene000668:CDS | 45.0% | |
| GTTTATAACACGGTACAGGC+AGG | - | chr1.4:81315726-81315745 | MS.gene000668:intron | 45.0% | |
| TCCGTTGGTCATGGAATTCA+TGG | - | chr1.4:81313648-81313667 | MS.gene000668:CDS | 45.0% | |
| TCTATAGGCAGATTGCGAAG+AGG | - | chr1.4:81315278-81315297 | MS.gene000668:intron | 45.0% | |
| TGATAATCGAGACGAGCGTA+AGG | + | chr1.4:81313806-81313825 | None:intergenic | 45.0% | |
| TGATCAAGAAGCAGCAGCTT+CGG | - | chr1.4:81315831-81315850 | MS.gene000668:intron | 45.0% | |
| TGTATTCAACTTCCACACGC+AGG | + | chr1.4:81315623-81315642 | None:intergenic | 45.0% | |
| TTATAACACGGTACAGGCAG+GGG | - | chr1.4:81315728-81315747 | MS.gene000668:intron | 45.0% | |
| ! | AAGCTATCCTGGAGTGCTTA+CGG | - | chr1.4:81314615-81314634 | MS.gene000668:CDS | 45.0% |
| ! | GGAACCAGAAATCCCTGTTT+TGG | + | chr1.4:81314968-81314987 | None:intergenic | 45.0% |
| ! | TCTAGAAGTACAGGAATGGG+TGG | + | chr1.4:81316174-81316193 | None:intergenic | 45.0% |
| !! | ACCCATAATGGATCACCACA+AGG | + | chr1.4:81316245-81316264 | None:intergenic | 45.0% |
| AAATGCAGAGCTGGGCTGAA+TGG | + | chr1.4:81315698-81315717 | None:intergenic | 50.0% | |
| ACCAGCATAGTAGTCAGGCT+AGG | - | chr1.4:81316406-81316425 | MS.gene000668:CDS | 50.0% | |
| ACCTAGCCTGACTACTATGC+TGG | + | chr1.4:81316410-81316429 | None:intergenic | 50.0% | |
| ACTGGATGCAGAACAGTTGG+TGG | - | chr1.4:81316347-81316366 | MS.gene000668:CDS | 50.0% | |
| AGAAGCAGCAGCTTCGGTTA+TGG | - | chr1.4:81315837-81315856 | MS.gene000668:intron | 50.0% | |
| AGAGAGTGGTGTGCACATGA+TGG | + | chr1.4:81313711-81313730 | None:intergenic | 50.0% | |
| AGAGGATCGTAAGGGAGAAG+AGG | + | chr1.4:81313752-81313771 | None:intergenic | 50.0% | |
| AGCTGAAATTGCAGCTCCAG+TGG | + | chr1.4:81315080-81315099 | None:intergenic | 50.0% | |
| ATGGGTCCAAGATTGCTCAG+TGG | - | chr1.4:81316259-81316278 | MS.gene000668:CDS | 50.0% | |
| CAGCAACTCCAACTTGGTCA+AGG | + | chr1.4:81315345-81315364 | None:intergenic | 50.0% | |
| CGGAAGGAAGAAGGATCTTC+TGG | + | chr1.4:81315967-81315986 | None:intergenic | 50.0% | |
| CTCTCCCTATGTCCTTAGAC+AGG | - | chr1.4:81314684-81314703 | MS.gene000668:CDS | 50.0% | |
| GAAGCTCAGCAACTCCAACT+TGG | + | chr1.4:81315351-81315370 | None:intergenic | 50.0% | |
| GATCGTAAGGGAGAAGAGGT+AGG | + | chr1.4:81313748-81313767 | None:intergenic | 50.0% | |
| GCACTGCCAGTATCTGCAAT+TGG | + | chr1.4:81316536-81316555 | None:intergenic | 50.0% | |
| GCTGCAATTTCAGCTGCCAT+TGG | - | chr1.4:81315085-81315104 | MS.gene000668:CDS | 50.0% | |
| GGTGTGCACATGATGGTTAG+AGG | + | chr1.4:81313704-81313723 | None:intergenic | 50.0% | |
| GGTGTGGACGGCTAATGTTT+AGG | + | chr1.4:81314916-81314935 | None:intergenic | 50.0% | |
| GTGTTTGTCCAGTATGCAGC+TGG | + | chr1.4:81314937-81314956 | None:intergenic | 50.0% | |
| TCAGCCCAGCTCTGCATTTA+TGG | - | chr1.4:81315699-81315718 | MS.gene000668:intron | 50.0% | |
| TGCAGAGGAGAGGATCGTAA+GGG | + | chr1.4:81313760-81313779 | None:intergenic | 50.0% | |
| TTCAGCGGGAAGATTAGCGT+CGG | + | chr1.4:81313888-81313907 | None:intergenic | 50.0% | |
| TTGCAGATACTGGCAGTGCA+AGG | - | chr1.4:81316537-81316556 | MS.gene000668:CDS | 50.0% | |
| !! | AGAACAGTTGGTGGCTGAAC+GGG | - | chr1.4:81316356-81316375 | MS.gene000668:CDS | 50.0% |
| !! | CAGAACAGTTGGTGGCTGAA+CGG | - | chr1.4:81316355-81316374 | MS.gene000668:CDS | 50.0% |
| AAATCCACCCGAGCGCTCAA+TGG | + | chr1.4:81315380-81315399 | None:intergenic | 55.0% | |
| AATCCACCCGAGCGCTCAAT+GGG | + | chr1.4:81315379-81315398 | None:intergenic | 55.0% | |
| ACACGTCTCTGCTCGGAGAA+TGG | + | chr1.4:81315872-81315891 | None:intergenic | 55.0% | |
| ACTTCTGGGCCTGCTACTCT+TGG | - | chr1.4:81315157-81315176 | MS.gene000668:CDS | 55.0% | |
| AGTCCAGGTCCAAGAGTAGC+AGG | + | chr1.4:81315169-81315188 | None:intergenic | 55.0% | |
| AGTGAGACCGAGGTTGGACA+AGG | - | chr1.4:81315592-81315611 | MS.gene000668:intron | 55.0% | |
| CAGTATGCAGCTGGTGTGGA+CGG | + | chr1.4:81314928-81314947 | None:intergenic | 55.0% | |
| CTGAACCGCGAAGGAGTAGT+TGG | - | chr1.4:81316099-81316118 | MS.gene000668:CDS | 55.0% | |
| CTTCGCGGTTCAGCATAAGC+CGG | + | chr1.4:81316092-81316111 | None:intergenic | 55.0% | |
| CTTGTTGCCGTAAGCACTCC+AGG | + | chr1.4:81314625-81314644 | None:intergenic | 55.0% | |
| GCTGTTGGAAGCTCCAGAAC+TGG | - | chr1.4:81316329-81316348 | MS.gene000668:CDS | 55.0% | |
| GCTTGCTCCCTTGACCAAGT+TGG | - | chr1.4:81315334-81315353 | MS.gene000668:intron | 55.0% | |
| GGGATCCAACTACTCCTTCG+CGG | + | chr1.4:81316107-81316126 | None:intergenic | 55.0% | |
| GGTACCACCTTGTCCAACCT+CGG | + | chr1.4:81315602-81315621 | None:intergenic | 55.0% | |
| GTGCAGAGGAGAGGATCGTA+AGG | + | chr1.4:81313761-81313780 | None:intergenic | 55.0% | |
| TAGAAGGCCTCCGTTGGTCA+TGG | - | chr1.4:81313639-81313658 | MS.gene000668:CDS | 55.0% | |
| TCAGAGTCCACAACGAGTCC+AGG | + | chr1.4:81315184-81315203 | None:intergenic | 55.0% | |
| TCAGTGAGTGAGACCGAGGT+TGG | - | chr1.4:81315586-81315605 | MS.gene000668:intron | 55.0% | |
| TCGAGAACCCATTGAGCGCT+CGG | - | chr1.4:81315369-81315388 | MS.gene000668:intron | 55.0% | |
| TCTTGGACCTGGACTCGTTG+TGG | - | chr1.4:81315174-81315193 | MS.gene000668:CDS | 55.0% | |
| TGCACACCACTCTCTCAACG+CGG | - | chr1.4:81313716-81313735 | MS.gene000668:CDS | 55.0% | |
| TGTCCAGTATGCAGCTGGTG+TGG | + | chr1.4:81314932-81314951 | None:intergenic | 55.0% | |
| ! | TGAACGGGTTCCAGTGCCAA+AGG | - | chr1.4:81316371-81316390 | MS.gene000668:CDS | 55.0% |
| AACCCATCGTCGTGCAGCAG+TGG | + | chr1.4:81315779-81315798 | None:intergenic | 60.0% | |
| ACGGTACAGGCAGGGGAACA+TGG | - | chr1.4:81315735-81315754 | MS.gene000668:intron | 60.0% | |
| AGGCAGTAGAAGGCCTCCGT+TGG | - | chr1.4:81313633-81313652 | MS.gene000668:CDS | 60.0% | |
| CACCACTGCTGCACGACGAT+GGG | - | chr1.4:81315774-81315793 | MS.gene000668:intron | 60.0% | |
| CCTCTCCTCTGCACTCGATG+CGG | - | chr1.4:81313767-81313786 | MS.gene000668:CDS | 60.0% | |
| CGAGAACCCATTGAGCGCTC+GGG | - | chr1.4:81315370-81315389 | MS.gene000668:intron | 60.0% | |
| CGCTTCAGTGAGTGAGACCG+AGG | - | chr1.4:81315582-81315601 | MS.gene000668:intron | 60.0% | |
| CGGCTTATGCTGAACCGCGA+AGG | - | chr1.4:81316090-81316109 | MS.gene000668:CDS | 60.0% | |
| CGGTACAGGCAGGGGAACAT+GGG | - | chr1.4:81315736-81315755 | MS.gene000668:intron | 60.0% | |
| CGTCCACACCAGCTGCATAC+TGG | - | chr1.4:81314926-81314945 | MS.gene000668:CDS | 60.0% | |
| GACAAGGTGGTACCTGCGTG+TGG | - | chr1.4:81315608-81315627 | MS.gene000668:intron | 60.0% | |
| GAGACCGAGGTTGGACAAGG+TGG | - | chr1.4:81315595-81315614 | MS.gene000668:intron | 60.0% | |
| GGGCATGACACGTCTCTGCT+CGG | + | chr1.4:81315879-81315898 | None:intergenic | 60.0% | |
| TCACCACTGCTGCACGACGA+TGG | - | chr1.4:81315773-81315792 | MS.gene000668:intron | 60.0% | |
| TCAGTGCCGCGTTGAGAGAG+TGG | + | chr1.4:81313725-81313744 | None:intergenic | 60.0% | |
| TGCAGCTCCAGTGGACCTCA+GGG | + | chr1.4:81315071-81315090 | None:intergenic | 60.0% | |
| TTGCAGCTCCAGTGGACCTC+AGG | + | chr1.4:81315072-81315091 | None:intergenic | 60.0% | |
| ! | TGAGCGCTCGGGTGGATTTG+TGG | - | chr1.4:81315381-81315400 | MS.gene000668:intron | 60.0% |
| !! | GGGAAGATTAGCGTCGGCGA+TGG | + | chr1.4:81313882-81313901 | None:intergenic | 60.0% |
| CCGCATCGAGTGCAGAGGAG+AGG | + | chr1.4:81313770-81313789 | None:intergenic | 65.0% | |
| CGGCGATGGAGCGAGGGAAA+GGG | + | chr1.4:81313868-81313887 | None:intergenic | 65.0% | |
| CTCCAGTGGACCTCAGGGGA+CGG | + | chr1.4:81315066-81315085 | None:intergenic | 65.0% | |
| GAACCCATTGAGCGCTCGGG+TGG | - | chr1.4:81315373-81315392 | MS.gene000668:intron | 65.0% | |
| GCAGCTCCAGTGGACCTCAG+GGG | + | chr1.4:81315070-81315089 | None:intergenic | 65.0% | |
| GGGCCTGCTACTCTTGGACC+TGG | - | chr1.4:81315163-81315182 | MS.gene000668:CDS | 65.0% | |
| TCGGCGATGGAGCGAGGGAA+AGG | + | chr1.4:81313869-81313888 | None:intergenic | 65.0% | |
| !! | TAGCGTCGGCGATGGAGCGA+GGG | + | chr1.4:81313874-81313893 | None:intergenic | 65.0% |
| !! | TTAGCGTCGGCGATGGAGCG+AGG | + | chr1.4:81313875-81313894 | None:intergenic | 65.0% |
| AGCCGTCCCCTGAGGTCCAC+TGG | - | chr1.4:81315061-81315080 | MS.gene000668:CDS | 70.0% | |
| GGTCTGGAAGCCGTCCCCTG+AGG | - | chr1.4:81315053-81315072 | MS.gene000668:CDS | 70.0% | |
| CGGCGCCGCATCGAGTGCAG+AGG | + | chr1.4:81313775-81313794 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 81313614 | 81316563 | 81313614 | ID=MS.gene000668 |
| chr1.4 | mRNA | 81313614 | 81316563 | 81313614 | ID=MS.gene000668.t1;Parent=MS.gene000668 |
| chr1.4 | exon | 81315967 | 81316563 | 81315967 | ID=MS.gene000668.t1.exon1;Parent=MS.gene000668.t1 |
| chr1.4 | CDS | 81315967 | 81316563 | 81315967 | ID=cds.MS.gene000668.t1;Parent=MS.gene000668.t1 |
| chr1.4 | exon | 81313614 | 81315275 | 81313614 | ID=MS.gene000668.t1.exon2;Parent=MS.gene000668.t1 |
| chr1.4 | CDS | 81313614 | 81315275 | 81313614 | ID=cds.MS.gene000668.t1;Parent=MS.gene000668.t1 |
| Gene Sequence |
| Protein sequence |
