AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene77559

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene77559.t1 MTR_3g084740 99.222 771 6 0 1 771 1 771 0.0 1587
MS.gene77559.t1 MTR_3g084740 98.699 692 9 0 1 692 1 692 0.0 1419
MS.gene77559.t1 MTR_8g011270 63.874 764 268 5 8 770 7 763 0.0 1025
MS.gene77559.t1 MTR_1g105605 44.171 772 399 13 4 770 1 745 0.0 635
MS.gene77559.t1 MTR_6g452520 71.642 134 37 1 546 679 7 139 6.48e-61 203
MS.gene77559.t1 MTR_6g452510 71.642 134 37 1 546 679 7 139 6.48e-61 203
MS.gene77559.t1 MTR_6g452530 71.642 134 37 1 546 679 7 139 7.48e-61 203
MS.gene77559.t1 MTR_7g110640 23.479 707 423 22 56 734 182 798 2.99e-31 131
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene77559.t1 AT1G05520 78.907 787 146 4 1 771 1 783 0.0 1291
MS.gene77559.t1 AT3G23660 79.076 779 141 5 1 771 1 765 0.0 1275
MS.gene77559.t1 AT3G23660 76.522 805 141 6 1 771 1 791 0.0 1261
MS.gene77559.t1 AT4G14160 77.477 777 164 4 1 771 1 772 0.0 1245
MS.gene77559.t1 AT4G14160 77.378 778 164 5 1 771 1 773 0.0 1241
MS.gene77559.t1 AT4G14160 75.248 606 139 4 1 600 1 601 0.0 931
MS.gene77559.t1 AT2G21630 58.279 767 301 10 10 770 8 761 0.0 892
MS.gene77559.t1 AT5G43670 43.317 808 390 11 10 770 7 793 0.0 677
MS.gene77559.t1 AT4G01810 22.772 707 438 23 56 734 201 827 3.28e-34 141
MS.gene77559.t1 AT4G01810 22.772 707 438 23 56 734 201 827 3.28e-34 141
MS.gene77559.t1 AT4G01810 22.772 707 438 23 56 734 201 827 3.28e-34 141

Find 209 sgRNAs with CRISPR-Local

Find 404 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGATCTTTGGAAATCTCTT+TGG 0.200075 3.2:+72917079 None:intergenic
TTCGCCTCTGTTCTAAGTTT+GGG 0.207149 3.2:-72913206 MS.gene77559:CDS
ACCGCCAGGACCACCTTTAA+TGG 0.226756 3.2:+72917007 None:intergenic
GATTTCCAAAGATCAGATTT+TGG 0.249496 3.2:-72917072 MS.gene77559:CDS
AAATCGTGAAACACCGGAAT+TGG 0.258703 3.2:+72916962 None:intergenic
ATTCGCCTCTGTTCTAAGTT+TGG 0.272083 3.2:-72913207 MS.gene77559:CDS
CTCAAAGGAAATCAAAATTC+AGG 0.273413 3.2:-72914564 MS.gene77559:CDS
TTGTTCCAAAATCTGATCTT+TGG 0.274830 3.2:+72917067 None:intergenic
TTACAACTGCAGCAGTTTCT+TGG 0.303545 3.2:+72913644 None:intergenic
ATCCTTCGGGACTCAGGTTC+AGG 0.304450 3.2:-72917153 MS.gene77559:CDS
TAGATATGCTTCTCTGAAAA+TGG 0.316254 3.2:-72913617 MS.gene77559:CDS
TCAGGTTCAGGTTCATGAAT+TGG 0.321846 3.2:-72917141 MS.gene77559:CDS
CGTTGTAATGAGGTGGAAAA+TGG 0.324821 3.2:+72917387 None:intergenic
TCGGCTCTTGGTAGAGCAAT+TGG 0.333563 3.2:-72917209 MS.gene77559:CDS
TTGCTCAGTGCTTGTAATCC+TGG 0.340613 3.2:-72916723 MS.gene77559:CDS
CAGGTTCAGGTTCATGAATT+GGG 0.353755 3.2:-72917140 MS.gene77559:CDS
ACAGGGGAAGGAGGAGGATT+AGG 0.354971 3.2:+72917287 None:intergenic
TTCACTGCTTTCTTAAAGTA+AGG 0.356416 3.2:+72916142 None:intergenic
TGCACACAAACCTGGTGTTC+TGG 0.358942 3.2:+72912757 None:intergenic
GGAGGATTAGGATCGGTATG+AGG 0.359326 3.2:+72917299 None:intergenic
ATCAAAATTCAGGGAATTGT+TGG 0.363724 3.2:-72914554 MS.gene77559:CDS
CGAAAGTATGCAGTCTCATC+TGG 0.366629 3.2:+72912994 None:intergenic
TTGATTTCACCGCTAAGATC+TGG 0.369179 3.2:-72917436 MS.gene77559:CDS
GTCGCAGATTGAACATAAAC+TGG 0.370469 3.2:+72913124 None:intergenic
TTACCTGATAATGCTCTTGT+TGG 0.375458 3.2:-72917182 MS.gene77559:CDS
GTTGTCCTGTCTGAAAGTTT+TGG 0.375902 3.2:-72915002 MS.gene77559:CDS
CCGATCTCTAATTATTGCTT+GGG 0.380772 3.2:+72912481 None:intergenic
GCTGCCAGGAGACCCATTAA+AGG 0.381421 3.2:-72917020 MS.gene77559:CDS
TGGTTCCGTTGATAACAAAA+TGG 0.383931 3.2:+72917407 None:intergenic
CGAAGCACTAATTGACCATC+TGG 0.389898 3.2:+72914080 None:intergenic
GTGAAATCAACGCGGGAGTA+AGG 0.395323 3.2:+72917449 None:intergenic
ACCGATCTCTAATTATTGCT+TGG 0.397173 3.2:+72912480 None:intergenic
CTTTGAGCATCTGCAAAGGC+TGG 0.397327 3.2:-72912138 MS.gene77559:CDS
CTATCATCTGCCCTCAAGAT+TGG 0.398230 3.2:+72912111 None:intergenic
GTGCTTGTAATCCTGGGACT+GGG 0.398443 3.2:-72916716 MS.gene77559:CDS
GGTCGTTTGCCAGGTGGAAC+AGG 0.406022 3.2:+72916786 None:intergenic
TTGCCCAACATAACCTTGTA+AGG 0.406762 3.2:+72914209 None:intergenic
ACTGCCTGCACCAGCATTGT+TGG 0.412650 3.2:-72912893 MS.gene77559:CDS
ATGGTCTTATTGCAGTTACC+AGG 0.412803 3.2:-72914105 MS.gene77559:intron
AACCCAACAAGAGCATTATC+AGG 0.413969 3.2:+72917179 None:intergenic
GAGAGGGGAACACAACAATA+TGG 0.415405 3.2:-72914342 MS.gene77559:CDS
ACTTTCGCATGTTGTTAAAC+CGG 0.419078 3.2:-72912978 MS.gene77559:CDS
TACCTGATAATGCTCTTGTT+GGG 0.419336 3.2:-72917181 MS.gene77559:CDS
GAGGATGGGGAGCAATCTCT+TGG 0.420007 3.2:-72914942 MS.gene77559:CDS
AGTGCTTGTAATCCTGGGAC+TGG 0.428437 3.2:-72916717 MS.gene77559:CDS
ATAAGGAAGACTGGGGATAT+CGG 0.430962 3.2:+72917511 None:intergenic
TGCTCAGTGCTTGTAATCCT+GGG 0.433431 3.2:-72916722 MS.gene77559:CDS
GGCGAGTGGGATAACGCATT+TGG 0.433530 3.2:+72917562 None:intergenic
TCGGTTTCCTGTTCCTAGAT+TGG 0.434541 3.2:-72912462 MS.gene77559:CDS
AATCGTGAAACACCGGAATT+GGG 0.437601 3.2:+72916963 None:intergenic
CGGCTCTTGGTAGAGCAATT+GGG 0.438079 3.2:-72917208 MS.gene77559:CDS
TCCGTATGACATGGAACGTC+TGG 0.441775 3.2:-72917607 MS.gene77559:CDS
TGCAAAACAGCTGGTTAACC+AGG 0.443952 3.2:-72916104 MS.gene77559:CDS
TGGGGCTAGAATTATAGCTT+TGG 0.450259 3.2:-72916697 MS.gene77559:CDS
AAAGGTGGTCCTGGCGGTAT+TGG 0.454172 3.2:-72917002 MS.gene77559:CDS
CATCGAGCAGGTCGTTTGCC+AGG 0.456521 3.2:+72916777 None:intergenic
CCGCCAGGACCACCTTTAAT+GGG 0.457134 3.2:+72917008 None:intergenic
TGATCACACACTACCAATCT+AGG 0.458169 3.2:+72912449 None:intergenic
AATAGCTCAATGGCGCAACT+TGG 0.459058 3.2:-72912794 MS.gene77559:CDS
AGGGTTGAGAATGGAGGTGC+AGG 0.459989 3.2:+72917469 None:intergenic
AGAGATTAATTATCTCAAAT+CGG 0.462983 3.2:-72917228 MS.gene77559:CDS
GGTGGTCCTGGCGGTATTGG+TGG 0.463044 3.2:-72916999 MS.gene77559:CDS
TAAGGAAGACTGGGGATATC+GGG 0.463197 3.2:+72917512 None:intergenic
CACACTACCAATCTAGGAAC+AGG 0.463957 3.2:+72912455 None:intergenic
ATTTGATTGCACACGGTGGT+TGG 0.465256 3.2:-72913241 MS.gene77559:CDS
TATCGGGATGAGAACGGATG+AGG 0.465331 3.2:+72917528 None:intergenic
AATTATCTCAAATCGGCTCT+TGG 0.465455 3.2:-72917221 MS.gene77559:CDS
ATGAATCTAGCAACAGAATC+CGG 0.466759 3.2:+72912848 None:intergenic
AGAATTATAGCTTTGGTTGG+AGG 0.468089 3.2:-72916690 MS.gene77559:CDS
CAGAATCCGGTCTGCAGCAA+TGG 0.471839 3.2:+72912861 None:intergenic
GATGCTCAAAGAAAACTTGA+AGG 0.476433 3.2:+72912150 None:intergenic
GAATTATAGCTTTGGTTGGA+GGG 0.477448 3.2:-72916689 MS.gene77559:CDS
TGTTGTGTTCCCCTCTCCTA+TGG 0.478248 3.2:+72914348 None:intergenic
TTGCAACGGAGGGGTGCATA+AGG 0.479670 3.2:+72917494 None:intergenic
ACCACCTTTAATGGGTCTCC+TGG 0.482558 3.2:+72917016 None:intergenic
GGTCCTGGCGGTATTGGTGG+TGG 0.482603 3.2:-72916996 MS.gene77559:CDS
CTTCTTCTAATTCTGCTGCC+AGG 0.483261 3.2:-72917034 MS.gene77559:CDS
TGTACCTGCAGTTCCTTACA+AGG 0.483740 3.2:-72914222 MS.gene77559:intron
AAAGTCGCAGTTGAAAGAAC+TGG 0.484739 3.2:-72915032 MS.gene77559:CDS
AGAAACTGCTGCAGTTGTAA+TGG 0.486703 3.2:-72913641 MS.gene77559:CDS
GCTAGAATTATAGCTTTGGT+TGG 0.486748 3.2:-72916693 MS.gene77559:CDS
TGCACCAGCATTGTTGGATG+TGG 0.489325 3.2:-72912887 MS.gene77559:CDS
TGAGGGTCTTGCAAAACAGC+TGG 0.493827 3.2:-72916113 MS.gene77559:CDS
CTTTCGCATGTTGTTAAACC+GGG 0.497065 3.2:-72912977 MS.gene77559:CDS
CCCAAGCAATAATTAGAGAT+CGG 0.501519 3.2:-72912481 MS.gene77559:CDS
ATTGCACACGGTGGTTGGAT+AGG 0.502936 3.2:-72913236 MS.gene77559:CDS
GAGGGGTGCATAAGGAAGAC+TGG 0.504207 3.2:+72917502 None:intergenic
ACGGACTCCGTCGATTCCCT+CGG 0.506453 3.2:+72917625 None:intergenic
GGCTGGCTGTCCAATCTTGA+GGG 0.507848 3.2:-72912121 None:intergenic
GGATTTAATGTAAAAGATGA+TGG 0.509344 3.2:+72913165 None:intergenic
ATCATCAACGATGTCGGAGA+TGG 0.510358 3.2:-72917660 None:intergenic
CGACAACAGTAACTAGAAGA+TGG 0.513117 3.2:-72914055 MS.gene77559:CDS
CCTTTGAGCAATTTATCTCA+AGG 0.514111 3.2:+72914579 None:intergenic
TCAAAGGAAATCAAAATTCA+GGG 0.514523 3.2:-72914563 MS.gene77559:CDS
GGAACTGCAGGTACAGTTGT+GGG 0.516592 3.2:+72914230 None:intergenic
TGCTTGTAATCCTGGGACTG+GGG 0.517545 3.2:-72916715 MS.gene77559:CDS
AGTTGTGGGTTGACACCACC+TGG 0.520955 3.2:+72914244 None:intergenic
TGTTGGACCTTGCACATCGA+TGG 0.521951 3.2:-72914537 MS.gene77559:CDS
AGGCTGGCTGTCCAATCTTG+AGG 0.522676 3.2:-72912122 None:intergenic
TGCAGTTACCAGGGCCCAGA+TGG 0.523337 3.2:-72914095 MS.gene77559:intron
AGACCCATTAAAGGTGGTCC+TGG 0.524454 3.2:-72917011 MS.gene77559:CDS
ACATCCAACAATGCTGGTGC+AGG 0.529135 3.2:+72912889 None:intergenic
GTTGCATTGAGTGTTGCAGC+TGG 0.529823 3.2:-72916747 MS.gene77559:CDS
TGGCTTCCATTGCTGCAGAC+CGG 0.530088 3.2:-72912867 MS.gene77559:CDS
GTTGGAGGGCCATGCACTGA+AGG 0.531152 3.2:-72916675 MS.gene77559:CDS
GAGGATTAGGATCGGTATGA+GGG 0.531440 3.2:+72917300 None:intergenic
ACAAACTGATATACCGTGCC+AGG 0.533185 3.2:+72916651 None:intergenic
AAACGACCTGCTCGATGTAC+CGG 0.533519 3.2:-72916771 MS.gene77559:CDS
GTGTATTCGCAATCAGAAGC+AGG 0.534381 3.2:+72916933 None:intergenic
GCACCACCACCAATACCGCC+AGG 0.534883 3.2:+72916993 None:intergenic
CTTTGAGCAATTTATCTCAA+GGG 0.536388 3.2:+72914580 None:intergenic
GAAACACCGGAATTGGGAAA+AGG 0.537131 3.2:+72916969 None:intergenic
GTGCCAGGTCCTTCAGTGCA+TGG 0.538214 3.2:+72916666 None:intergenic
AATGCGCACGAGATGGCTGC+TGG 0.539530 3.2:-72912203 MS.gene77559:CDS
ATTGCTTGGGAATCATCTTG+TGG 0.540119 3.2:+72912494 None:intergenic
AGGGAGATTGTGGCGGCGAG+TGG 0.542010 3.2:+72917548 None:intergenic
GTGTGATCAACACGGTTCCC+AGG 0.543667 3.2:-72912435 MS.gene77559:intron
ATAGCTCAATGGCGCAACTT+GGG 0.545562 3.2:-72912793 MS.gene77559:CDS
ACTTAGAACAGAGGCGAATG+AGG 0.545572 3.2:+72913211 None:intergenic
TCGCCTCTGTTCTAAGTTTG+GGG 0.545724 3.2:-72913205 MS.gene77559:CDS
ATAATTCTAGCCCCAGTCCC+AGG 0.547661 3.2:+72916705 None:intergenic
TCAGAAATCGCGTTGTAATG+AGG 0.548123 3.2:+72917377 None:intergenic
GGGCCATGCACTGAAGGACC+TGG 0.548285 3.2:-72916669 MS.gene77559:CDS
AGGGGTGCATAAGGAAGACT+GGG 0.548496 3.2:+72917503 None:intergenic
GCTGATACCGCCATAGGAGA+GGG 0.552355 3.2:-72914358 MS.gene77559:CDS
ATAACCTTGTAAGGAACTGC+AGG 0.554745 3.2:+72914218 None:intergenic
CGGACTCCGTCGATTCCCTC+GGG 0.556274 3.2:+72917626 None:intergenic
TATTCAACGGTGGTGTATTG+AGG 0.556523 3.2:+72917329 None:intergenic
TCTGTTGCTGATACCGCCAT+AGG 0.556798 3.2:-72914364 MS.gene77559:CDS
GAGTGGGATAACGCATTTGG+AGG 0.557533 3.2:+72917565 None:intergenic
AGATCTTTATGAGAACGCAC+TGG 0.557658 3.2:+72916181 None:intergenic
AGAACGGATGAGGGAGATTG+TGG 0.559381 3.2:+72917538 None:intergenic
CTAATTGACCATCTGGGCCC+TGG 0.560974 3.2:+72914087 None:intergenic
TATTGAGGATAGAGTTCACC+AGG 0.561257 3.2:+72917344 None:intergenic
CACAAACCTGGTGTTCTGGT+TGG 0.561924 3.2:+72912761 None:intergenic
GCGGGAGTAAGGGTTGAGAA+TGG 0.562790 3.2:+72917460 None:intergenic
GATCAATGGCCTGTTCCACC+TGG 0.564462 3.2:-72916795 MS.gene77559:CDS
TGAAATCAACGCGGGAGTAA+GGG 0.568126 3.2:+72917450 None:intergenic
GAAGCCACATCCAACAATGC+TGG 0.572390 3.2:+72912883 None:intergenic
GCAACTCCGGTACATCGAGC+AGG 0.572772 3.2:+72916765 None:intergenic
ATTTCTGAAACTCATCTCCC+TGG 0.574744 3.2:-72917362 MS.gene77559:CDS
GTTATTCAGGAATTGGCTCA+AGG 0.575831 3.2:-72913673 MS.gene77559:intron
GGGAGATTGTGGCGGCGAGT+GGG 0.576660 3.2:+72917549 None:intergenic
ATATAATAATGCGCACGAGA+TGG 0.576745 3.2:-72912210 MS.gene77559:CDS
AACTTTCAGACAGGACAACA+AGG 0.579452 3.2:+72915006 None:intergenic
AGGAACTGCAGGTACAGTTG+TGG 0.581947 3.2:+72914229 None:intergenic
ATGGGATGACAATAGCTCAA+TGG 0.585675 3.2:-72912804 MS.gene77559:CDS
GCGACGCTCACAGTTTGTAC+AGG 0.585828 3.2:-72913106 MS.gene77559:intron
ATCGGGATGAGAACGGATGA+GGG 0.588713 3.2:+72917529 None:intergenic
TGGTCTTATTGCAGTTACCA+GGG 0.591873 3.2:-72914104 MS.gene77559:intron
TCGACGGAGTCCGTATGACA+TGG 0.594875 3.2:-72917616 MS.gene77559:CDS
AATGACCAAAACTTTCAGAC+AGG 0.595747 3.2:+72914997 None:intergenic
AGTGATCGTTCAAATACTCC+AGG 0.597059 3.2:-72914262 MS.gene77559:CDS
AGGAATTGCAGAGAGATCAA+TGG 0.601153 3.2:-72916809 MS.gene77559:CDS
ACAGATCCCGAGGGAATCGA+CGG 0.601592 3.2:-72917632 MS.gene77559:CDS
ACCTTCTCCATCGATGTGCA+AGG 0.603833 3.2:+72914530 None:intergenic
TCGCAGATTGAACATAAACT+GGG 0.603920 3.2:+72913125 None:intergenic
GCATTATTATATGTTGCTGA+CGG 0.604893 3.2:+72912221 None:intergenic
TGGGGATATCGGGATGAGAA+CGG 0.606733 3.2:+72917522 None:intergenic
CCTTGAGATAAATTGCTCAA+AGG 0.607083 3.2:-72914579 MS.gene77559:CDS
AATGAATATGATATTAGTGA+TGG 0.607798 3.2:+72912922 None:intergenic
GATCTTTATGAGAACGCACT+GGG 0.608467 3.2:+72916182 None:intergenic
CCGGGAAAATATTAATAATG+CGG 0.608982 3.2:-72912959 MS.gene77559:CDS
TGCTGATACCGCCATAGGAG+AGG 0.609019 3.2:-72914359 MS.gene77559:CDS
GACAACAGTAACTAGAAGAT+GGG 0.609204 3.2:-72914054 MS.gene77559:CDS
ACCTTGCACATCGATGGAGA+AGG 0.610130 3.2:-72914531 MS.gene77559:intron
GCCAGACGTTCCATGTCATA+CGG 0.610591 3.2:+72917606 None:intergenic
ATGCACTGAAGGACCTGGCA+CGG 0.612108 3.2:-72916664 MS.gene77559:intron
CCCATTAAAGGTGGTCCTGG+CGG 0.614447 3.2:-72917008 MS.gene77559:CDS
TGTGTTCCCCTCTCCTATGG+CGG 0.618650 3.2:+72914351 None:intergenic
AACCTGAACCTGAGTCCCGA+AGG 0.620756 3.2:+72917151 None:intergenic
TGGACAGATCCAGATCTTAG+CGG 0.625634 3.2:+72917427 None:intergenic
TTCTCTGAAAATGGAGACAG+AGG 0.627078 3.2:-72913608 MS.gene77559:intron
GTCGCAGTTGAAAGAACTGG+TGG 0.633285 3.2:-72915029 MS.gene77559:CDS
ATGAGGGATATGATATTCAA+CGG 0.634959 3.2:+72917316 None:intergenic
TGCAACACTCAATGCAACTC+CGG 0.636467 3.2:+72916752 None:intergenic
AGGAAACATTTGATTGCACA+CGG 0.637118 3.2:-72913248 MS.gene77559:CDS
GATGGCGAACACAGATCCCG+AGG 0.639336 3.2:-72917642 MS.gene77559:CDS
TAAGTTTGGGGATTACCGCA+AGG 0.640681 3.2:-72913193 MS.gene77559:CDS
GAAATCGCGTTGTAATGAGG+TGG 0.643805 3.2:+72917380 None:intergenic
GAAGCACTAATTGACCATCT+GGG 0.645330 3.2:+72914081 None:intergenic
TCAGAACCAACCAGAACACC+AGG 0.646048 3.2:-72912767 MS.gene77559:intron
TAAAGATCTTGATAAAGATG+CGG 0.649605 3.2:-72916167 MS.gene77559:CDS
GCCAGGAGACCCATTAAAGG+TGG 0.654293 3.2:-72917017 MS.gene77559:CDS
CGCAGATTGAACATAAACTG+GGG 0.660034 3.2:+72913126 None:intergenic
CGAGCAGGTCGTTTGCCAGG+TGG 0.660104 3.2:+72916780 None:intergenic
AGATAGTGCTGTTAGCTCTG+AGG 0.662391 3.2:-72914030 MS.gene77559:intron
ATGGCGGTATCAGCAACAGA+AGG 0.662506 3.2:+72914367 None:intergenic
CTGATACCGCCATAGGAGAG+GGG 0.664771 3.2:-72914357 MS.gene77559:CDS
AAAGATCTAAAACATGACCC+TGG 0.670877 3.2:+72916086 None:intergenic
GGAGTAAGGGTTGAGAATGG+AGG 0.671591 3.2:+72917463 None:intergenic
GCAAAACAGCTGGTTAACCA+GGG 0.675809 3.2:-72916103 MS.gene77559:CDS
CTTAGCGGTGAAATCAACGC+GGG 0.678250 3.2:+72917442 None:intergenic
ACGGATGAGGGAGATTGTGG+CGG 0.679027 3.2:+72917541 None:intergenic
GGAAGGAGGAGGATTAGGAT+CGG 0.693230 3.2:+72917292 None:intergenic
ATGGCGAACACAGATCCCGA+GGG 0.694002 3.2:-72917641 MS.gene77559:CDS
ACAACAATATGGAAGATGTG+TGG 0.696066 3.2:-72914331 MS.gene77559:CDS
AAGATGATGGATCATCCTTG+CGG 0.696117 3.2:+72913178 None:intergenic
GCAGATTGAACATAAACTGG+GGG 0.697137 3.2:+72913127 None:intergenic
AATCCCCAAACTTAGAACAG+AGG 0.701622 3.2:+72913202 None:intergenic
GATCGTTCAAATACTCCAGG+TGG 0.701854 3.2:-72914259 MS.gene77559:CDS
GAGGATTCTACTTTGCTACG+TGG 0.707824 3.2:+72917584 None:intergenic
TTGGTAGTGTGTGATCAACA+CGG 0.729590 3.2:-72912443 MS.gene77559:CDS
AGGGATATGATATTCAACGG+TGG 0.744253 3.2:+72917319 None:intergenic
AAACATTTGATTGCACACGG+TGG 0.751378 3.2:-72913245 MS.gene77559:CDS
TTGCGAATACACTCTCAATG+CGG 0.783057 3.2:-72916922 MS.gene77559:intron
TCTTAGCGGTGAAATCAACG+CGG 0.800179 3.2:+72917441 None:intergenic
ATTGAGGATAGAGTTCACCA+GGG 0.804613 3.2:+72917345 None:intergenic
GGGGTGCATAAGGAAGACTG+GGG 0.813434 3.2:+72917504 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATAATATGCTAAAAATTA+CGG - chr3.2:72916387-72916406 MS.gene77559:intron 10.0%
!! AATTAATGTATCACAAAAAT+GGG + chr3.2:72914159-72914178 None:intergenic 15.0%
!! TAAATTCAAACATTTAGATT+AGG + chr3.2:72915940-72915959 None:intergenic 15.0%
!! TAATTAATGTATCACAAAAA+TGG + chr3.2:72914160-72914179 None:intergenic 15.0%
!! TTAAAATAATCCTAAACAAA+CGG - chr3.2:72914119-72914138 MS.gene77559:intron 15.0%
!! TTCTTAAATTGATTAATAAC+AGG - chr3.2:72916055-72916074 MS.gene77559:intron 15.0%
!! TTTAAGTAAAACACAAAATT+AGG - chr3.2:72916307-72916326 MS.gene77559:intron 15.0%
!!! ATAATTTAAAACAAAAGTTG+TGG + chr3.2:72915091-72915110 None:intergenic 15.0%
!!! TCATGGTTATTTTATATTTT+AGG - chr3.2:72914702-72914721 MS.gene77559:intron 15.0%
!! AAAACATTTGTACTAAATAG+CGG + chr3.2:72914462-72914481 None:intergenic 20.0%
!! AAGTATGAGAAAATTATAAG+TGG + chr3.2:72913741-72913760 None:intergenic 20.0%
!! AATGAATATGATATTAGTGA+TGG + chr3.2:72916855-72916874 None:intergenic 20.0%
!! AGAGATTAATTATCTCAAAT+CGG - chr3.2:72912546-72912565 MS.gene77559:intron 20.0%
!! ATTGAGTTTGAAAAACAATT+CGG - chr3.2:72914645-72914664 MS.gene77559:intron 20.0%
!! CAAAAATGGGATAAATTATA+AGG + chr3.2:72914146-72914165 None:intergenic 20.0%
!! CGTTGAATATATAAATTTAC+AGG + chr3.2:72914299-72914318 None:intergenic 20.0%
!! GAAAAATAAGAAATAACAAC+AGG + chr3.2:72914952-72914971 None:intergenic 20.0%
!! GTAAATTTATATATTCAACG+TGG - chr3.2:72914299-72914318 MS.gene77559:CDS 20.0%
!! TGTTATTAAAAATATGCGAT+GGG + chr3.2:72914518-72914537 None:intergenic 20.0%
!! TTATGGTGAAATATATTTAC+AGG - chr3.2:72916743-72916762 MS.gene77559:CDS 20.0%
!!! AATAAATCTGAATGTGTTTT+AGG + chr3.2:72916232-72916251 None:intergenic 20.0%
!!! AATGTATGATTGATGATTTA+TGG - chr3.2:72913154-72913173 MS.gene77559:CDS 20.0%
!!! ATGTATTTTATATGCATTTG+CGG - chr3.2:72916442-72916461 MS.gene77559:intron 20.0%
!!! ATTTTTCAGTTATACTTGTT+GGG - chr3.2:72914965-72914984 MS.gene77559:CDS 20.0%
!!! GGTTATTTTATATTTTAGGT+TGG - chr3.2:72914706-72914725 MS.gene77559:intron 20.0%
!!! TAATTATTTCTCTTGTTAGT+TGG - chr3.2:72913764-72913783 MS.gene77559:intron 20.0%
!!! TATTTTTCAGTTATACTTGT+TGG - chr3.2:72914964-72914983 MS.gene77559:CDS 20.0%
!!! TTAACTTTAATTTATGGTAC+AGG - chr3.2:72917234-72917253 MS.gene77559:CDS 20.0%
!!! TTGTTATTAAAAATATGCGA+TGG + chr3.2:72914519-72914538 None:intergenic 20.0%
! AAAGAAAATTAGTTAGCGTT+AGG - chr3.2:72913209-72913228 MS.gene77559:CDS 25.0%
! AATAAAATTGATGCTCAGTA+AGG + chr3.2:72916501-72916520 None:intergenic 25.0%
! CATGTTTATTCTCTAATGAT+TGG - chr3.2:72916000-72916019 MS.gene77559:intron 25.0%
! GCAAATGCATATAAAATACA+TGG + chr3.2:72916443-72916462 None:intergenic 25.0%
! GGATTTAATGTAAAAGATGA+TGG + chr3.2:72916612-72916631 None:intergenic 25.0%
! TAAAATTGGAATAACTGGAA+GGG - chr3.2:72913438-72913457 MS.gene77559:intron 25.0%
! TAAAGATCTTGATAAAGATG+CGG - chr3.2:72913607-72913626 MS.gene77559:intron 25.0%
! TAACAAAAGGGATGAAAATA+CGG + chr3.2:72917443-72917462 None:intergenic 25.0%
! TAACAGCAATTTCTTTAGTA+GGG + chr3.2:72917049-72917068 None:intergenic 25.0%
! TAATGTGTTTATGTTTCAGT+GGG - chr3.2:72915170-72915189 MS.gene77559:intron 25.0%
! TCAAAGGAAATCAAAATTCA+GGG - chr3.2:72915211-72915230 MS.gene77559:intron 25.0%
! TCATAATAGGAAACTTACTA+GGG - chr3.2:72917482-72917501 MS.gene77559:CDS 25.0%
! TCTTTACAGAAAGATAGTTT+AGG + chr3.2:72915844-72915863 None:intergenic 25.0%
! TTATGAAAAATCTTGACTCA+AGG + chr3.2:72917468-72917487 None:intergenic 25.0%
! TTCATAATAGGAAACTTACT+AGG - chr3.2:72917481-72917500 MS.gene77559:CDS 25.0%
!! CTGCTGTTAACTTTAATTTA+TGG - chr3.2:72917228-72917247 MS.gene77559:CDS 25.0%
!! CTTACATTATTGTGTTATTC+AGG - chr3.2:72916088-72916107 MS.gene77559:CDS 25.0%
!! GAGTCAAGATTTTTCATAAT+AGG - chr3.2:72917469-72917488 MS.gene77559:CDS 25.0%
!! TTATTGTGTTATTCAGGAAT+TGG - chr3.2:72916094-72916113 MS.gene77559:CDS 25.0%
!! TTTTAGGCTTACTTAAGTAT+AGG - chr3.2:72914216-72914235 MS.gene77559:intron 25.0%
!!! AGCATCAATTTTATTTGATC+AGG - chr3.2:72916506-72916525 MS.gene77559:intron 25.0%
!!! TCTAAAGTTTATGTTTTTCG+CGG - chr3.2:72912670-72912689 MS.gene77559:intron 25.0%
!!! TTAGTGTGGTTATTTTTCAT+GGG - chr3.2:72916952-72916971 MS.gene77559:CDS 25.0%
!!! TTTAGTGTGGTTATTTTTCA+TGG - chr3.2:72916951-72916970 MS.gene77559:CDS 25.0%
AAGGAATGTTATGGATAACA+TGG + chr3.2:72914186-72914205 None:intergenic 30.0%
AGAGAATAAACATGTCATTC+AGG + chr3.2:72915994-72916013 None:intergenic 30.0%
AGGAAGAAAACAACAATAAC+AGG + chr3.2:72916696-72916715 None:intergenic 30.0%
ATCAAAATTCAGGGAATTGT+TGG - chr3.2:72915220-72915239 MS.gene77559:intron 30.0%
ATGAGGGATATGATATTCAA+CGG + chr3.2:72912461-72912480 None:intergenic 30.0%
ATGTTGTTAAATAGCAGCTA+TGG - chr3.2:72914379-72914398 MS.gene77559:intron 30.0%
ATTATAAGGTCCGTTTGTTT+AGG + chr3.2:72914132-72914151 None:intergenic 30.0%
CCATAAATCAGCTAACTATT+AGG + chr3.2:72916729-72916748 None:intergenic 30.0%
CCGGGAAAATATTAATAATG+CGG - chr3.2:72916815-72916834 MS.gene77559:CDS 30.0%
CTAATGTGTTTATGTTTCAG+TGG - chr3.2:72915169-72915188 MS.gene77559:intron 30.0%
CTCAAAGGAAATCAAAATTC+AGG - chr3.2:72915210-72915229 MS.gene77559:intron 30.0%
CTTTGAGCAATTTATCTCAA+GGG + chr3.2:72915197-72915216 None:intergenic 30.0%
GAGAACAAAAGATAGTAAGA+CGG + chr3.2:72916203-72916222 None:intergenic 30.0%
GCATTATTATATGTTGCTGA+CGG + chr3.2:72917556-72917575 None:intergenic 30.0%
GCTCATGGTATGAATAATTT+GGG + chr3.2:72917381-72917400 None:intergenic 30.0%
GTAAAATTGGAATAACTGGA+AGG - chr3.2:72913437-72913456 MS.gene77559:intron 30.0%
GTAACAGCAATTTCTTTAGT+AGG + chr3.2:72917050-72917069 None:intergenic 30.0%
GTCGATGTGATAGAAATATT+TGG - chr3.2:72915814-72915833 MS.gene77559:intron 30.0%
GTTATCCATAACATTCCTTA+CGG - chr3.2:72914187-72914206 MS.gene77559:intron 30.0%
GTTTCATTGATGTCTTTAAC+AGG - chr3.2:72917504-72917523 MS.gene77559:CDS 30.0%
TCAACAAATATATACTTCCC+AGG + chr3.2:72916268-72916287 None:intergenic 30.0%
TCTCTGATAAACGATATGTA+GGG + chr3.2:72915140-72915159 None:intergenic 30.0%
TCTTGAATTAGAGATTGTGT+TGG - chr3.2:72915312-72915331 MS.gene77559:intron 30.0%
TGACTCAAGGATTAACAAAA+GGG + chr3.2:72917455-72917474 None:intergenic 30.0%
TGCTCATGGTATGAATAATT+TGG + chr3.2:72917382-72917401 None:intergenic 30.0%
TGTCTTTCCACTATTTCATT+GGG - chr3.2:72915625-72915644 MS.gene77559:intron 30.0%
TGTGGTAAAATTGGAATAAC+TGG - chr3.2:72913433-72913452 MS.gene77559:intron 30.0%
TTATCCATAACATTCCTTAC+GGG - chr3.2:72914188-72914207 MS.gene77559:intron 30.0%
TTCAATGATGTTGTCAATCT+CGG + chr3.2:72914550-72914569 None:intergenic 30.0%
TTCACTGCTTTCTTAAAGTA+AGG + chr3.2:72913635-72913654 None:intergenic 30.0%
TTGACTCAAGGATTAACAAA+AGG + chr3.2:72917456-72917475 None:intergenic 30.0%
TTGAGCATTAATAATGGTCA+TGG - chr3.2:72915650-72915669 MS.gene77559:intron 30.0%
TTGTTCCAAAATCTGATCTT+TGG + chr3.2:72912710-72912729 None:intergenic 30.0%
TTGTTGAAATGAATGCTAGT+GGG - chr3.2:72916281-72916300 MS.gene77559:intron 30.0%
TTTCTCTTGTTAGTTGGATA+TGG - chr3.2:72913770-72913789 MS.gene77559:intron 30.0%
TTTGTTGAAATGAATGCTAG+TGG - chr3.2:72916280-72916299 MS.gene77559:intron 30.0%
! CCGCATTATTAATATTTTCC+CGG + chr3.2:72916818-72916837 None:intergenic 30.0%
! CCTAATAGTTAGCTGATTTA+TGG - chr3.2:72916726-72916745 MS.gene77559:CDS 30.0%
! GATTTCCAAAGATCAGATTT+TGG - chr3.2:72912702-72912721 MS.gene77559:intron 30.0%
! GTTGGGCAAATTTTGTAAAT+AGG - chr3.2:72915579-72915598 MS.gene77559:intron 30.0%
! TAGATATGCTTCTCTGAAAA+TGG - chr3.2:72916157-72916176 MS.gene77559:CDS 30.0%
! TTTTCAGAAAAACAGAAGCA+TGG + chr3.2:72913961-72913980 None:intergenic 30.0%
! TTTTCATATAGCTGCTATAG+TGG - chr3.2:72914478-72914497 MS.gene77559:intron 30.0%
!! AAAGCAGTGAAGTTTTATGA+GGG - chr3.2:72913644-72913663 MS.gene77559:CDS 30.0%
!! AAAGTGTTGTGTGGTAAAAT+TGG - chr3.2:72913424-72913443 MS.gene77559:intron 30.0%
!! GTGAATAGCTTTGATATTGA+TGG - chr3.2:72916329-72916348 MS.gene77559:intron 30.0%
!! TCATAGAAGTGTGTTTTTCT+TGG - chr3.2:72913384-72913403 MS.gene77559:intron 30.0%
!! TCTGTCCATTTTGTTATCAA+CGG - chr3.2:72912362-72912381 MS.gene77559:intron 30.0%
!!! AGATCAGATTTTGGAACAAT+TGG - chr3.2:72912711-72912730 MS.gene77559:intron 30.0%
!!! ATGATGCTTCTTTTTTCTCA+AGG - chr3.2:72915047-72915066 MS.gene77559:CDS 30.0%
!!! GATCAGATTTTGGAACAATT+GGG - chr3.2:72912712-72912731 MS.gene77559:intron 30.0%
!!! GCTAGATTCATATTTTAGTG+TGG - chr3.2:72916938-72916957 MS.gene77559:CDS 30.0%
!!! GTTTCTTTCTGTTAGTTTTG+TGG - chr3.2:72917133-72917152 MS.gene77559:CDS 30.0%
!!! TATGCCTTGGATTTTGTTTT+CGG - chr3.2:72913184-72913203 MS.gene77559:CDS 30.0%
AAGCAGAAAGAGAAAAACAG+GGG + chr3.2:72912506-72912525 None:intergenic 35.0%
AATGACCAAAACTTTCAGAC+AGG + chr3.2:72914780-72914799 None:intergenic 35.0%
AATTTGTGAGCAGAATTCTC+AGG + chr3.2:72917072-72917091 None:intergenic 35.0%
ACAACAATATGGAAGATGTG+TGG - chr3.2:72915443-72915462 MS.gene77559:intron 35.0%
ACCGATCTCTAATTATTGCT+TGG + chr3.2:72917297-72917316 None:intergenic 35.0%
ACTTTCGCATGTTGTTAAAC+CGG - chr3.2:72916796-72916815 MS.gene77559:CDS 35.0%
AGCTATGTCATGCAGAATTT+CGG - chr3.2:72915911-72915930 MS.gene77559:intron 35.0%
AGGAAACATTTGATTGCACA+CGG - chr3.2:72916526-72916545 MS.gene77559:intron 35.0%
AGTTCCTTACAAGGTTATGT+TGG - chr3.2:72915561-72915580 MS.gene77559:intron 35.0%
ATAAGAAATAACAACAGGCG+AGG + chr3.2:72914947-72914966 None:intergenic 35.0%
ATACTCATCAGTATTGCTCA+TGG + chr3.2:72917396-72917415 None:intergenic 35.0%
ATATAATAATGCGCACGAGA+TGG - chr3.2:72917564-72917583 MS.gene77559:CDS 35.0%
ATGAATCTAGCAACAGAATC+CGG + chr3.2:72916929-72916948 None:intergenic 35.0%
CAACAAAAATCGTGAAACAC+CGG + chr3.2:72912821-72912840 None:intergenic 35.0%
CAAGCAGAAAGAGAAAAACA+GGG + chr3.2:72912507-72912526 None:intergenic 35.0%
CCCAAGCAATAATTAGAGAT+CGG - chr3.2:72917293-72917312 MS.gene77559:CDS 35.0%
CCGATCTCTAATTATTGCTT+GGG + chr3.2:72917296-72917315 None:intergenic 35.0%
CCTTGAGATAAATTGCTCAA+AGG - chr3.2:72915195-72915214 MS.gene77559:intron 35.0%
CCTTTGAGCAATTTATCTCA+AGG + chr3.2:72915198-72915217 None:intergenic 35.0%
GACAACAGTAACTAGAAGAT+GGG - chr3.2:72915720-72915739 MS.gene77559:intron 35.0%
GATGCTCAAAGAAAACTTGA+AGG + chr3.2:72917627-72917646 None:intergenic 35.0%
GTAAGAAACAATACTGACCT+GGG + chr3.2:72917359-72917378 None:intergenic 35.0%
GTCTCTGATAAACGATATGT+AGG + chr3.2:72915141-72915160 None:intergenic 35.0%
GTGTCTTTCCACTATTTCAT+TGG - chr3.2:72915624-72915643 MS.gene77559:intron 35.0%
GTTCCTTACAAGGTTATGTT+GGG - chr3.2:72915562-72915581 MS.gene77559:intron 35.0%
TCAAGCAGAAAGAGAAAAAC+AGG + chr3.2:72912508-72912527 None:intergenic 35.0%
TCGAAGTTTCATAGTCATGT+TGG - chr3.2:72913299-72913318 MS.gene77559:intron 35.0%
TCGCAGATTGAACATAAACT+GGG + chr3.2:72916652-72916671 None:intergenic 35.0%
TGGGTCTTGAGCATTAATAA+TGG - chr3.2:72915644-72915663 MS.gene77559:intron 35.0%
TGTTGAAATGAATGCTAGTG+GGG - chr3.2:72916282-72916301 MS.gene77559:intron 35.0%
TTCACCGAAAACAAAATCCA+AGG + chr3.2:72913191-72913210 None:intergenic 35.0%
TTGTTAAATAGCAGCTATGG+CGG - chr3.2:72914382-72914401 MS.gene77559:intron 35.0%
TTTACTCACATACTGCAGAA+AGG - chr3.2:72915383-72915402 MS.gene77559:intron 35.0%
TTTCCAAACTCCACATTAGA+AGG - chr3.2:72913896-72913915 MS.gene77559:intron 35.0%
TTTGGAAAAATTGAGCTGCA+TGG + chr3.2:72913884-72913903 None:intergenic 35.0%
! AAAGATCTAAAACATGACCC+TGG + chr3.2:72913691-72913710 None:intergenic 35.0%
! AATTATCTCAAATCGGCTCT+TGG - chr3.2:72912553-72912572 MS.gene77559:intron 35.0%
! CTGATCTTTGGAAATCTCTT+TGG + chr3.2:72912698-72912717 None:intergenic 35.0%
! CTTGTTGGGTTTTTATCCTT+CGG - chr3.2:72912607-72912626 MS.gene77559:intron 35.0%
! GAAGTGTGTTTTTCTTGGTT+TGG - chr3.2:72913389-72913408 MS.gene77559:intron 35.0%
! TAAACAGTTTTGCATGCACT+TGG - chr3.2:72913990-72914009 MS.gene77559:intron 35.0%
! TACCTGATAATGCTCTTGTT+GGG - chr3.2:72912593-72912612 MS.gene77559:intron 35.0%
! TTACCTGATAATGCTCTTGT+TGG - chr3.2:72912592-72912611 MS.gene77559:intron 35.0%
! TTCCTTACGGGAAAGTTTTT+AGG - chr3.2:72914200-72914219 MS.gene77559:intron 35.0%
! TTGGATGAACCGTTGTTATT+CGG - chr3.2:72914432-72914451 MS.gene77559:intron 35.0%
! TTGTTGGGTTTTTATCCTTC+GGG - chr3.2:72912608-72912627 MS.gene77559:intron 35.0%
! TTTTCTTTGAGCATCTGCAA+AGG - chr3.2:72917632-72917651 MS.gene77559:CDS 35.0%
! TTTTGGTCATTCAGTCTTCA+AGG - chr3.2:72914789-72914808 MS.gene77559:intron 35.0%
!! AGAATTATAGCTTTGGTTGG+AGG - chr3.2:72913084-72913103 MS.gene77559:intron 35.0%
!! CTCTTTTAAGCGTGTTTTTG+AGG - chr3.2:72914813-72914832 MS.gene77559:intron 35.0%
!! GAAAGCAGTGAAGTTTTATG+AGG - chr3.2:72913643-72913662 MS.gene77559:CDS 35.0%
!! GAATGATTTGTTAGGCGTAT+TGG - chr3.2:72913274-72913293 MS.gene77559:intron 35.0%
!! GAATTATAGCTTTGGTTGGA+GGG - chr3.2:72913085-72913104 MS.gene77559:intron 35.0%
!! GCTAGAATTATAGCTTTGGT+TGG - chr3.2:72913081-72913100 MS.gene77559:intron 35.0%
!! TGAAAGTTCAAAGTGTTGTG+TGG - chr3.2:72913415-72913434 MS.gene77559:intron 35.0%
!! TGGTTCCGTTGATAACAAAA+TGG + chr3.2:72912370-72912389 None:intergenic 35.0%
!! TTAAGCGTGTTTTTGAGGAT+GGG - chr3.2:72914818-72914837 MS.gene77559:intron 35.0%
!! TTTAAGCGTGTTTTTGAGGA+TGG - chr3.2:72914817-72914836 MS.gene77559:intron 35.0%
!!! ATTGTTTTTTCAGCTGTTGG+AGG - chr3.2:72912945-72912964 MS.gene77559:CDS 35.0%
!!! CTTTCTGTTAGTTTTGTGGA+CGG - chr3.2:72917137-72917156 MS.gene77559:CDS 35.0%
!!! CTTTGTTTTGTGCTGATTCA+TGG - chr3.2:72914685-72914704 MS.gene77559:intron 35.0%
!!! GTGATTGTTTTTTCAGCTGT+TGG - chr3.2:72912942-72912961 MS.gene77559:CDS 35.0%
!!! TCCAGTCTTTTTTATGTCTG+TGG - chr3.2:72915771-72915790 MS.gene77559:intron 35.0%
AAACATTTGATTGCACACGG+TGG - chr3.2:72916529-72916548 MS.gene77559:intron 40.0%
AAAGTCGCAGTTGAAAGAAC+TGG - chr3.2:72914742-72914761 MS.gene77559:intron 40.0%
AAATCGTGAAACACCGGAAT+TGG + chr3.2:72912815-72912834 None:intergenic 40.0%
AACTATGTTGGCATCTCACT+TGG + chr3.2:72915009-72915028 None:intergenic 40.0%
AACTATTAGGACTGCAGAAC+AGG + chr3.2:72916716-72916735 None:intergenic 40.0%
AACTTTCAGACAGGACAACA+AGG + chr3.2:72914771-72914790 None:intergenic 40.0%
AAGTGAGATGCCAACATAGT+TGG - chr3.2:72915008-72915027 MS.gene77559:CDS 40.0%
AATCCCCAAACTTAGAACAG+AGG + chr3.2:72916575-72916594 None:intergenic 40.0%
AATCGTGAAACACCGGAATT+GGG + chr3.2:72912814-72912833 None:intergenic 40.0%
ACGTGGTTAATACATCCATC+TGG - chr3.2:72914316-72914335 MS.gene77559:CDS 40.0%
AGAAACTGCTGCAGTTGTAA+TGG - chr3.2:72916133-72916152 MS.gene77559:CDS 40.0%
AGAAAGAGAAAAACAGGGGA+AGG + chr3.2:72912502-72912521 None:intergenic 40.0%
AGATCTTTATGAGAACGCAC+TGG + chr3.2:72913596-72913615 None:intergenic 40.0%
AGCCTAAAAACTTTCCCGTA+AGG + chr3.2:72914205-72914224 None:intergenic 40.0%
AGGAATTGCAGAGAGATCAA+TGG - chr3.2:72912965-72912984 MS.gene77559:CDS 40.0%
AGGGATATGATATTCAACGG+TGG + chr3.2:72912458-72912477 None:intergenic 40.0%
AGTGAGATGCCAACATAGTT+GGG - chr3.2:72915009-72915028 MS.gene77559:CDS 40.0%
AGTGATCGTTCAAATACTCC+AGG - chr3.2:72915512-72915531 MS.gene77559:intron 40.0%
ATAACCTTGTAAGGAACTGC+AGG + chr3.2:72915559-72915578 None:intergenic 40.0%
ATAAGGAAGACTGGGGATAT+CGG + chr3.2:72912266-72912285 None:intergenic 40.0%
ATGCCTTCTAATGTGGAGTT+TGG + chr3.2:72913902-72913921 None:intergenic 40.0%
ATGGGATGACAATAGCTCAA+TGG - chr3.2:72916970-72916989 MS.gene77559:CDS 40.0%
ATGTTGTCAATCTCGGATAG+TGG + chr3.2:72914543-72914562 None:intergenic 40.0%
ATTGAGGATAGAGTTCACCA+GGG + chr3.2:72912432-72912451 None:intergenic 40.0%
ATTGCTTGGGAATCATCTTG+TGG + chr3.2:72917283-72917302 None:intergenic 40.0%
CAGAGAGAGAAAAGGAATAC+TGG + chr3.2:72917211-72917230 None:intergenic 40.0%
CATCAGAGATATTCTGTGGA+TGG + chr3.2:72913518-72913537 None:intergenic 40.0%
CGACAACAGTAACTAGAAGA+TGG - chr3.2:72915719-72915738 MS.gene77559:intron 40.0%
CGCAGATTGAACATAAACTG+GGG + chr3.2:72916651-72916670 None:intergenic 40.0%
CGTGGTTAATACATCCATCT+GGG - chr3.2:72914317-72914336 MS.gene77559:CDS 40.0%
CGTTGTAATGAGGTGGAAAA+TGG + chr3.2:72912390-72912409 None:intergenic 40.0%
CTCAAGACCCAATGAAATAG+TGG + chr3.2:72915635-72915654 None:intergenic 40.0%
CTTTCCCGTAAGGAATGTTA+TGG + chr3.2:72914195-72914214 None:intergenic 40.0%
CTTTCGCATGTTGTTAAACC+GGG - chr3.2:72916797-72916816 MS.gene77559:CDS 40.0%
GAATAACTGGAAGGGAACTT+TGG - chr3.2:72913446-72913465 MS.gene77559:intron 40.0%
GAATCAGAGCATGATATGTC+TGG - chr3.2:72915351-72915370 MS.gene77559:intron 40.0%
GATCTTTATGAGAACGCACT+GGG + chr3.2:72913595-72913614 None:intergenic 40.0%
GCAGATTGAACATAAACTGG+GGG + chr3.2:72916650-72916669 None:intergenic 40.0%
GCCACAGACATAAAAAAGAC+TGG + chr3.2:72915775-72915794 None:intergenic 40.0%
GGATTAGATGCCTTCTAATG+TGG + chr3.2:72913909-72913928 None:intergenic 40.0%
GGTAAGAAACAATACTGACC+TGG + chr3.2:72917360-72917379 None:intergenic 40.0%
GTCGCAGATTGAACATAAAC+TGG + chr3.2:72916653-72916672 None:intergenic 40.0%
GTTAACAGCAGAGAGAGAAA+AGG + chr3.2:72917219-72917238 None:intergenic 40.0%
TATTCAACGGTGGTGTATTG+AGG + chr3.2:72912448-72912467 None:intergenic 40.0%
TATTGAGGATAGAGTTCACC+AGG + chr3.2:72912433-72912452 None:intergenic 40.0%
TATTTACTCAAGCAGCTCCT+GGG - chr3.2:72916248-72916267 MS.gene77559:intron 40.0%
TCAGAAATCGCGTTGTAATG+AGG + chr3.2:72912400-72912419 None:intergenic 40.0%
TCGACATCAGAGATATTCTG+TGG + chr3.2:72913522-72913541 None:intergenic 40.0%
TGATCACACACTACCAATCT+AGG + chr3.2:72917328-72917347 None:intergenic 40.0%
TGCTATAGCGTAGCAGAATT+TGG - chr3.2:72914413-72914432 MS.gene77559:intron 40.0%
TGGGGCTAGAATTATAGCTT+TGG - chr3.2:72913077-72913096 MS.gene77559:intron 40.0%
TGGGGGAAAAGAGAAAATGA+TGG + chr3.2:72916633-72916652 None:intergenic 40.0%
TGTTGTCAATCTCGGATAGT+GGG + chr3.2:72914542-72914561 None:intergenic 40.0%
TTACAACTGCAGCAGTTTCT+TGG + chr3.2:72916133-72916152 None:intergenic 40.0%
TTATTTACTCAAGCAGCTCC+TGG - chr3.2:72916247-72916266 MS.gene77559:intron 40.0%
TTGATTTCACCGCTAAGATC+TGG - chr3.2:72912338-72912357 MS.gene77559:intron 40.0%
TTGCCCAACATAACCTTGTA+AGG + chr3.2:72915568-72915587 None:intergenic 40.0%
TTGCGAATACACTCTCAATG+CGG - chr3.2:72912852-72912871 MS.gene77559:CDS 40.0%
! ATTCGCCTCTGTTCTAAGTT+TGG - chr3.2:72916567-72916586 MS.gene77559:intron 40.0%
! CAGGTTCAGGTTCATGAATT+GGG - chr3.2:72912634-72912653 MS.gene77559:intron 40.0%
! GAAGCACTAATTGACCATCT+GGG + chr3.2:72915696-72915715 None:intergenic 40.0%
! GTTATTCAGGAATTGGCTCA+AGG - chr3.2:72916101-72916120 MS.gene77559:CDS 40.0%
! GTTGTCCTGTCTGAAAGTTT+TGG - chr3.2:72914772-72914791 MS.gene77559:intron 40.0%
! TACCTTTGTTTCTCCCTAAC+CGG - chr3.2:72914255-72914274 MS.gene77559:CDS 40.0%
! TCAGGTTCAGGTTCATGAAT+TGG - chr3.2:72912633-72912652 MS.gene77559:intron 40.0%
! TTCGCCTCTGTTCTAAGTTT+GGG - chr3.2:72916568-72916587 MS.gene77559:intron 40.0%
! TTCTCTGAAAATGGAGACAG+AGG - chr3.2:72916166-72916185 MS.gene77559:CDS 40.0%
! TTTTGCATCAGCACTTGATC+AGG - chr3.2:72913709-72913728 MS.gene77559:intron 40.0%
!! AACCCAACAAGAGCATTATC+AGG + chr3.2:72912598-72912617 None:intergenic 40.0%
!! AAGATGATGGATCATCCTTG+CGG + chr3.2:72916599-72916618 None:intergenic 40.0%
!! ATGGTCTTATTGCAGTTACC+AGG - chr3.2:72915669-72915688 MS.gene77559:intron 40.0%
!! ATTTCTGAAACTCATCTCCC+TGG - chr3.2:72912412-72912431 MS.gene77559:intron 40.0%
!! TAAGCGTGTTTTTGAGGATG+GGG - chr3.2:72914819-72914838 MS.gene77559:intron 40.0%
!! TACGAGCGGAATGATTTGTT+AGG - chr3.2:72913266-72913285 MS.gene77559:intron 40.0%
!! TGGTCTTATTGCAGTTACCA+GGG - chr3.2:72915670-72915689 MS.gene77559:intron 40.0%
!! TTATGGCTGTTTCTATGCCT+TGG - chr3.2:72913171-72913190 MS.gene77559:CDS 40.0%
!! TTGGTAGTGTGTGATCAACA+CGG - chr3.2:72917331-72917350 MS.gene77559:CDS 40.0%
!!! CTTAGAGGCATTTTCGTAGT+TGG - chr3.2:72917167-72917186 MS.gene77559:CDS 40.0%
!!! CTTTTTTATGTCTGTGGCTG+TGG - chr3.2:72915777-72915796 MS.gene77559:intron 40.0%
AAACCACTCAGCAGAAATGC+TGG + chr3.2:72913930-72913949 None:intergenic 45.0%
AACATAGTTGGGACGTCTCT+TGG - chr3.2:72915020-72915039 MS.gene77559:CDS 45.0%
AAGAGAAAAACAGGGGAAGG+AGG + chr3.2:72912499-72912518 None:intergenic 45.0%
AAGAGACGTCCCAACTATGT+TGG + chr3.2:72915021-72915040 None:intergenic 45.0%
AATAGCTCAATGGCGCAACT+TGG - chr3.2:72916980-72916999 MS.gene77559:CDS 45.0%
AATCCAGCATTTCTGCTGAG+TGG - chr3.2:72913924-72913943 MS.gene77559:intron 45.0%
ACAAACTGATATACCGTGCC+AGG + chr3.2:72913126-72913145 None:intergenic 45.0%
ACTTAGAACAGAGGCGAATG+AGG + chr3.2:72916566-72916585 None:intergenic 45.0%
AGAAATAACAACAGGCGAGG+AGG + chr3.2:72914944-72914963 None:intergenic 45.0%
AGCGGATCACCGAATAACAA+CGG + chr3.2:72914444-72914463 None:intergenic 45.0%
ATAGCTCAATGGCGCAACTT+GGG - chr3.2:72916981-72917000 MS.gene77559:CDS 45.0%
ATCAGATACAGTGCTCGCTA+AGG - chr3.2:72913808-72913827 MS.gene77559:intron 45.0%
ATTTGATTGCACACGGTGGT+TGG - chr3.2:72916533-72916552 MS.gene77559:intron 45.0%
CACACTACCAATCTAGGAAC+AGG + chr3.2:72917322-72917341 None:intergenic 45.0%
CATCTGGGTGTTCGTATTGA+CGG - chr3.2:72914332-72914351 MS.gene77559:CDS 45.0%
CTTCTTCTAATTCTGCTGCC+AGG - chr3.2:72912740-72912759 MS.gene77559:intron 45.0%
GAAACACCGGAATTGGGAAA+AGG + chr3.2:72912808-72912827 None:intergenic 45.0%
GAAATCGCGTTGTAATGAGG+TGG + chr3.2:72912397-72912416 None:intergenic 45.0%
GAGAGGGGAACACAACAATA+TGG - chr3.2:72915432-72915451 MS.gene77559:intron 45.0%
GAGGATTAGGATCGGTATGA+GGG + chr3.2:72912477-72912496 None:intergenic 45.0%
GAGGATTCTACTTTGCTACG+TGG + chr3.2:72912193-72912212 None:intergenic 45.0%
GATCGTTCAAATACTCCAGG+TGG - chr3.2:72915515-72915534 MS.gene77559:intron 45.0%
GCAAAACAGCTGGTTAACCA+GGG - chr3.2:72913671-72913690 MS.gene77559:intron 45.0%
GTGTATTCGCAATCAGAAGC+AGG + chr3.2:72912844-72912863 None:intergenic 45.0%
TAAGGAAGACTGGGGATATC+GGG + chr3.2:72912265-72912284 None:intergenic 45.0%
TAAGTTTGGGGATTACCGCA+AGG - chr3.2:72916581-72916600 MS.gene77559:intron 45.0%
TCGAGCTGAATCATTACGAG+CGG - chr3.2:72913252-72913271 MS.gene77559:intron 45.0%
TCGGTTTCCTGTTCCTAGAT+TGG - chr3.2:72917312-72917331 MS.gene77559:CDS 45.0%
TCTTAGCGGTGAAATCAACG+CGG + chr3.2:72912336-72912355 None:intergenic 45.0%
TGAAATCAACGCGGGAGTAA+GGG + chr3.2:72912327-72912346 None:intergenic 45.0%
TGCAAAACAGCTGGTTAACC+AGG - chr3.2:72913670-72913689 MS.gene77559:intron 45.0%
TGCAACACTCAATGCAACTC+CGG + chr3.2:72913025-72913044 None:intergenic 45.0%
TGCTCAGTGCTTGTAATCCT+GGG - chr3.2:72913052-72913071 MS.gene77559:intron 45.0%
TGGACAGATCCAGATCTTAG+CGG + chr3.2:72912350-72912369 None:intergenic 45.0%
TGTACCTGCAGTTCCTTACA+AGG - chr3.2:72915552-72915571 MS.gene77559:intron 45.0%
TGTAGGGAGAACAAGAGACA+AGG + chr3.2:72915124-72915143 None:intergenic 45.0%
TTGCTCAGTGCTTGTAATCC+TGG - chr3.2:72913051-72913070 MS.gene77559:intron 45.0%
TTTATGTCTGTGGCTGTGGA+TGG - chr3.2:72915781-72915800 MS.gene77559:intron 45.0%
! CGAAAGTATGCAGTCTCATC+TGG + chr3.2:72916783-72916802 None:intergenic 45.0%
! CGAAGCACTAATTGACCATC+TGG + chr3.2:72915697-72915716 None:intergenic 45.0%
! GTGTTCGTATTGACGGCATT+GGG - chr3.2:72914339-72914358 MS.gene77559:CDS 45.0%
! GTTTTTATCCTTCGGGACTC+AGG - chr3.2:72912615-72912634 MS.gene77559:intron 45.0%
! TCGCCTCTGTTCTAAGTTTG+GGG - chr3.2:72916569-72916588 MS.gene77559:intron 45.0%
!! AGATAGTGCTGTTAGCTCTG+AGG - chr3.2:72915744-72915763 MS.gene77559:intron 45.0%
!! AAAAAACATATATATATATA+TGG + chr3.2:72914067-72914086 None:intergenic 5.0%
AAACGACCTGCTCGATGTAC+CGG - chr3.2:72913003-72913022 MS.gene77559:CDS 50.0%
AATAACAACAGGCGAGGAGG+AGG + chr3.2:72914941-72914960 None:intergenic 50.0%
ACATCCAACAATGCTGGTGC+AGG + chr3.2:72916888-72916907 None:intergenic 50.0%
ACCTTCTCCATCGATGTGCA+AGG + chr3.2:72915247-72915266 None:intergenic 50.0%
ACCTTGCACATCGATGGAGA+AGG - chr3.2:72915243-72915262 MS.gene77559:intron 50.0%
AGAAAAACAGGGGAAGGAGG+AGG + chr3.2:72912496-72912515 None:intergenic 50.0%
AGAACGGATGAGGGAGATTG+TGG + chr3.2:72912239-72912258 None:intergenic 50.0%
AGACCCATTAAAGGTGGTCC+TGG - chr3.2:72912763-72912782 MS.gene77559:intron 50.0%
AGGAACTGCAGGTACAGTTG+TGG + chr3.2:72915548-72915567 None:intergenic 50.0%
AGTGCTTGTAATCCTGGGAC+TGG - chr3.2:72913057-72913076 MS.gene77559:intron 50.0%
ATAACAACAGGCGAGGAGGA+GGG + chr3.2:72914940-72914959 None:intergenic 50.0%
ATAATTCTAGCCCCAGTCCC+AGG + chr3.2:72913072-72913091 None:intergenic 50.0%
ATCGGGATGAGAACGGATGA+GGG + chr3.2:72912248-72912267 None:intergenic 50.0%
ATGGCGGTATCAGCAACAGA+AGG + chr3.2:72915410-72915429 None:intergenic 50.0%
ATTGCACACGGTGGTTGGAT+AGG - chr3.2:72916538-72916557 MS.gene77559:intron 50.0%
CACAAACCTGGTGTTCTGGT+TGG + chr3.2:72917016-72917035 None:intergenic 50.0%
CGGCTCTTGGTAGAGCAATT+GGG - chr3.2:72912566-72912585 MS.gene77559:intron 50.0%
CGTCAATACGAACACCCAGA+TGG + chr3.2:72914334-72914353 None:intergenic 50.0%
CTTAGCGGTGAAATCAACGC+GGG + chr3.2:72912335-72912354 None:intergenic 50.0%
CTTTGAGCATCTGCAAAGGC+TGG - chr3.2:72917636-72917655 MS.gene77559:CDS 50.0%
GAAGCCACATCCAACAATGC+TGG + chr3.2:72916894-72916913 None:intergenic 50.0%
GAGTGGGATAACGCATTTGG+AGG + chr3.2:72912212-72912231 None:intergenic 50.0%
GCCAGACGTTCCATGTCATA+CGG + chr3.2:72912171-72912190 None:intergenic 50.0%
GGAACTGCAGGTACAGTTGT+GGG + chr3.2:72915547-72915566 None:intergenic 50.0%
GGAAGGAGGAGGATTAGGAT+CGG + chr3.2:72912485-72912504 None:intergenic 50.0%
GGAGGATTAGGATCGGTATG+AGG + chr3.2:72912478-72912497 None:intergenic 50.0%
GGAGTAAGGGTTGAGAATGG+AGG + chr3.2:72912314-72912333 None:intergenic 50.0%
GTCGCAGTTGAAAGAACTGG+TGG - chr3.2:72914745-72914764 MS.gene77559:intron 50.0%
GTGAAATCAACGCGGGAGTA+AGG + chr3.2:72912328-72912347 None:intergenic 50.0%
GTGCTTGTAATCCTGGGACT+GGG - chr3.2:72913058-72913077 MS.gene77559:intron 50.0%
TATCGGGATGAGAACGGATG+AGG + chr3.2:72912249-72912268 None:intergenic 50.0%
TCAGAACCAACCAGAACACC+AGG - chr3.2:72917007-72917026 MS.gene77559:CDS 50.0%
TCCGTATGACATGGAACGTC+TGG - chr3.2:72912167-72912186 MS.gene77559:CDS 50.0%
TCGGCTCTTGGTAGAGCAAT+TGG - chr3.2:72912565-72912584 MS.gene77559:intron 50.0%
TCTGTTGCTGATACCGCCAT+AGG - chr3.2:72915410-72915429 MS.gene77559:intron 50.0%
TGAGGGTCTTGCAAAACAGC+TGG - chr3.2:72913661-72913680 MS.gene77559:CDS 50.0%
TGCACACAAACCTGGTGTTC+TGG + chr3.2:72917020-72917039 None:intergenic 50.0%
TGCACCAGCATTGTTGGATG+TGG - chr3.2:72916887-72916906 MS.gene77559:intron 50.0%
TGCTTGTAATCCTGGGACTG+GGG - chr3.2:72913059-72913078 MS.gene77559:intron 50.0%
TGGGGATATCGGGATGAGAA+CGG + chr3.2:72912255-72912274 None:intergenic 50.0%
TGTTGGACCTTGCACATCGA+TGG - chr3.2:72915237-72915256 MS.gene77559:intron 50.0%
TGTTGTGTTCCCCTCTCCTA+TGG + chr3.2:72915429-72915448 None:intergenic 50.0%
! ACCACCTTTAATGGGTCTCC+TGG + chr3.2:72912761-72912780 None:intergenic 50.0%
! AGGGGTGCATAAGGAAGACT+GGG + chr3.2:72912274-72912293 None:intergenic 50.0%
! GGTGCTCCTTTTCCCAATTC+CGG - chr3.2:72912799-72912818 MS.gene77559:CDS 50.0%
! GGTGTTCGTATTGACGGCAT+TGG - chr3.2:72914338-72914357 MS.gene77559:CDS 50.0%
! GTGGACGGTGTTTTGCTTAG+AGG - chr3.2:72917152-72917171 MS.gene77559:CDS 50.0%
! GTTGCATTGAGTGTTGCAGC+TGG - chr3.2:72913027-72913046 MS.gene77559:intron 50.0%
! TAGCCAAGCATTGCCGGTTA+GGG + chr3.2:72914271-72914290 None:intergenic 50.0%
! TGCCGGTTAGGGAGAAACAA+AGG + chr3.2:72914260-72914279 None:intergenic 50.0%
! TGTTGGGTGCTGCAGATGAT+TGG - chr3.2:72914981-72915000 MS.gene77559:CDS 50.0%
!! TGGAGGTGCAGGTTTTGCAA+CGG + chr3.2:72912297-72912316 None:intergenic 50.0%
AAAGGTGGTCCTGGCGGTAT+TGG - chr3.2:72912772-72912791 MS.gene77559:CDS 55.0%
AACCGGCAATGCTTGGCTAC+AGG - chr3.2:72914272-72914291 MS.gene77559:CDS 55.0%
AACCTGAACCTGAGTCCCGA+AGG + chr3.2:72912626-72912645 None:intergenic 55.0%
ACAGATCCCGAGGGAATCGA+CGG - chr3.2:72912142-72912161 MS.gene77559:CDS 55.0%
ACAGGGGAAGGAGGAGGATT+AGG + chr3.2:72912490-72912509 None:intergenic 55.0%
ACCGCCAGGACCACCTTTAA+TGG + chr3.2:72912770-72912789 None:intergenic 55.0%
ACGGATGAGGGAGATTGTGG+CGG + chr3.2:72912236-72912255 None:intergenic 55.0%
ACTGCCTGCACCAGCATTGT+TGG - chr3.2:72916881-72916900 MS.gene77559:intron 55.0%
ATCCTTCGGGACTCAGGTTC+AGG - chr3.2:72912621-72912640 MS.gene77559:intron 55.0%
ATGCACTGAAGGACCTGGCA+CGG - chr3.2:72913110-72913129 MS.gene77559:CDS 55.0%
ATGGCGAACACAGATCCCGA+GGG - chr3.2:72912133-72912152 MS.gene77559:CDS 55.0%
CAGAATCCGGTCTGCAGCAA+TGG + chr3.2:72916916-72916935 None:intergenic 55.0%
CCCATTAAAGGTGGTCCTGG+CGG - chr3.2:72912766-72912785 MS.gene77559:intron 55.0%
CCGCCAGGACCACCTTTAAT+GGG + chr3.2:72912769-72912788 None:intergenic 55.0%
CTAATTGACCATCTGGGCCC+TGG + chr3.2:72915690-72915709 None:intergenic 55.0%
CTGATACCGCCATAGGAGAG+GGG - chr3.2:72915417-72915436 MS.gene77559:intron 55.0%
GAGGATGGGGAGCAATCTCT+TGG - chr3.2:72914832-72914851 MS.gene77559:intron 55.0%
GATCAATGGCCTGTTCCACC+TGG - chr3.2:72912979-72912998 MS.gene77559:CDS 55.0%
GCCAGGAGACCCATTAAAGG+TGG - chr3.2:72912757-72912776 MS.gene77559:intron 55.0%
GCGACGCTCACAGTTTGTAC+AGG - chr3.2:72916668-72916687 MS.gene77559:CDS 55.0%
GCGGGAGTAAGGGTTGAGAA+TGG + chr3.2:72912317-72912336 None:intergenic 55.0%
GCTGATACCGCCATAGGAGA+GGG - chr3.2:72915416-72915435 MS.gene77559:intron 55.0%
GCTGCCAGGAGACCCATTAA+AGG - chr3.2:72912754-72912773 MS.gene77559:intron 55.0%
GGCATGACTGCACACAAACC+TGG + chr3.2:72917028-72917047 None:intergenic 55.0%
GGCGAGTGGGATAACGCATT+TGG + chr3.2:72912215-72912234 None:intergenic 55.0%
GGGGTGCATAAGGAAGACTG+GGG + chr3.2:72912273-72912292 None:intergenic 55.0%
GTGTGATCAACACGGTTCCC+AGG - chr3.2:72917339-72917358 MS.gene77559:CDS 55.0%
TCGACGGAGTCCGTATGACA+TGG - chr3.2:72912158-72912177 MS.gene77559:CDS 55.0%
TCTCCCTAACCGGCAATGCT+TGG - chr3.2:72914265-72914284 MS.gene77559:CDS 55.0%
TGCTGATACCGCCATAGGAG+AGG - chr3.2:72915415-72915434 MS.gene77559:intron 55.0%
TGGCTTCCATTGCTGCAGAC+CGG - chr3.2:72916907-72916926 MS.gene77559:intron 55.0%
TGTGTTCCCCTCTCCTATGG+CGG + chr3.2:72915426-72915445 None:intergenic 55.0%
! AGGGTTGAGAATGGAGGTGC+AGG + chr3.2:72912308-72912327 None:intergenic 55.0%
! AGGTGCAGGTTTTGCAACGG+AGG + chr3.2:72912294-72912313 None:intergenic 55.0%
! AGTTGTGGGTTGACACCACC+TGG + chr3.2:72915533-72915552 None:intergenic 55.0%
! GAGGGGTGCATAAGGAAGAC+TGG + chr3.2:72912275-72912294 None:intergenic 55.0%
! GGTGCAGGTTTTGCAACGGA+GGG + chr3.2:72912293-72912312 None:intergenic 55.0%
! GTAGCCAAGCATTGCCGGTT+AGG + chr3.2:72914272-72914291 None:intergenic 55.0%
! GTCCTGTAGCCAAGCATTGC+CGG + chr3.2:72914277-72914296 None:intergenic 55.0%
! GTGCAGGTTTTGCAACGGAG+GGG + chr3.2:72912292-72912311 None:intergenic 55.0%
! TTGCAACGGAGGGGTGCATA+AGG + chr3.2:72912283-72912302 None:intergenic 55.0%
AATGCGCACGAGATGGCTGC+TGG - chr3.2:72917571-72917590 MS.gene77559:CDS 60.0%
CATCGAGCAGGTCGTTTGCC+AGG + chr3.2:72913000-72913019 None:intergenic 60.0%
GATGGCGAACACAGATCCCG+AGG - chr3.2:72912132-72912151 MS.gene77559:CDS 60.0%
GCAACTCCGGTACATCGAGC+AGG + chr3.2:72913012-72913031 None:intergenic 60.0%
GGTCGTTTGCCAGGTGGAAC+AGG + chr3.2:72912991-72913010 None:intergenic 60.0%
GTGCCAGGTCCTTCAGTGCA+TGG + chr3.2:72913111-72913130 None:intergenic 60.0%
GTTGGAGGGCCATGCACTGA+AGG - chr3.2:72913099-72913118 MS.gene77559:intron 60.0%
TGCAGTTACCAGGGCCCAGA+TGG - chr3.2:72915679-72915698 MS.gene77559:intron 60.0%
!! ACGGACTCCGTCGATTCCCT+CGG + chr3.2:72912152-72912171 None:intergenic 60.0%
AGGGAGATTGTGGCGGCGAG+TGG + chr3.2:72912229-72912248 None:intergenic 65.0%
CGAGCAGGTCGTTTGCCAGG+TGG + chr3.2:72912997-72913016 None:intergenic 65.0%
GCACCACCACCAATACCGCC+AGG + chr3.2:72912784-72912803 None:intergenic 65.0%
GGGAGATTGTGGCGGCGAGT+GGG + chr3.2:72912228-72912247 None:intergenic 65.0%
GGGCCATGCACTGAAGGACC+TGG - chr3.2:72913105-72913124 MS.gene77559:intron 65.0%
! GGTGGTCCTGGCGGTATTGG+TGG - chr3.2:72912775-72912794 MS.gene77559:CDS 65.0%
!! CGGACTCCGTCGATTCCCTC+GGG + chr3.2:72912151-72912170 None:intergenic 65.0%
!! GGTCCTGGCGGTATTGGTGG+TGG - chr3.2:72912778-72912797 MS.gene77559:CDS 65.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 72912124 72917672 72912124 ID=MS.gene77559
chr3.2 mRNA 72912124 72917672 72912124 ID=MS.gene77559.t1;Parent=MS.gene77559
chr3.2 exon 72916923 72917672 72916923 ID=MS.gene77559.t1.exon1;Parent=MS.gene77559.t1
chr3.2 CDS 72916923 72917672 72916923 ID=cds.MS.gene77559.t1;Parent=MS.gene77559.t1
chr3.2 exon 72916665 72916838 72916665 ID=MS.gene77559.t1.exon2;Parent=MS.gene77559.t1
chr3.2 CDS 72916665 72916838 72916665 ID=cds.MS.gene77559.t1;Parent=MS.gene77559.t1
chr3.2 exon 72916066 72916227 72916066 ID=MS.gene77559.t1.exon3;Parent=MS.gene77559.t1
chr3.2 CDS 72916066 72916227 72916066 ID=cds.MS.gene77559.t1;Parent=MS.gene77559.t1
chr3.2 exon 72914930 72915072 72914930 ID=MS.gene77559.t1.exon4;Parent=MS.gene77559.t1
chr3.2 CDS 72914930 72915072 72914930 ID=cds.MS.gene77559.t1;Parent=MS.gene77559.t1
chr3.2 exon 72914532 72914607 72914532 ID=MS.gene77559.t1.exon5;Parent=MS.gene77559.t1
chr3.2 CDS 72914532 72914607 72914532 ID=cds.MS.gene77559.t1;Parent=MS.gene77559.t1
chr3.2 exon 72914223 72914395 72914223 ID=MS.gene77559.t1.exon6;Parent=MS.gene77559.t1
chr3.2 CDS 72914223 72914395 72914223 ID=cds.MS.gene77559.t1;Parent=MS.gene77559.t1
chr3.2 exon 72914031 72914112 72914031 ID=MS.gene77559.t1.exon7;Parent=MS.gene77559.t1
chr3.2 CDS 72914031 72914112 72914031 ID=cds.MS.gene77559.t1;Parent=MS.gene77559.t1
chr3.2 exon 72913609 72913686 72913609 ID=MS.gene77559.t1.exon8;Parent=MS.gene77559.t1
chr3.2 CDS 72913609 72913686 72913609 ID=cds.MS.gene77559.t1;Parent=MS.gene77559.t1
chr3.2 exon 72913107 72913268 72913107 ID=MS.gene77559.t1.exon9;Parent=MS.gene77559.t1
chr3.2 CDS 72913107 72913268 72913107 ID=cds.MS.gene77559.t1;Parent=MS.gene77559.t1
chr3.2 exon 72912768 72913031 72912768 ID=MS.gene77559.t1.exon10;Parent=MS.gene77559.t1
chr3.2 CDS 72912768 72913031 72912768 ID=cds.MS.gene77559.t1;Parent=MS.gene77559.t1
chr3.2 exon 72912436 72912540 72912436 ID=MS.gene77559.t1.exon11;Parent=MS.gene77559.t1
chr3.2 CDS 72912436 72912540 72912436 ID=cds.MS.gene77559.t1;Parent=MS.gene77559.t1
chr3.2 exon 72912124 72912270 72912124 ID=MS.gene77559.t1.exon12;Parent=MS.gene77559.t1
chr3.2 CDS 72912124 72912270 72912124 ID=cds.MS.gene77559.t1;Parent=MS.gene77559.t1
Gene Sequence

>MS.gene77559

ATGTCGGAGATGGCGAACACAGATCCCGAGGGAATCGACGGAGTCCGTATGACATGGAACGTCTGGCCACGTAGCAAAGTAGAATCCTCCAAATGCGTTATCCCACTCGCCGCCACAATCTCCCTCATCCGTTCTCATCCCGATATCCCCAGTCTTCCTTATGCACCCCTCCGTTGCAAAACCTGCACCTCCATTCTCAACCCTTACTCCCGCGTTGATTTCACCGCTAAGATCTGGATCTGTCCATTTTGTTATCAACGGAACCATTTTCCACCTCATTACAACGCGATTTCTGAAACTCATCTCCCTGGTGAACTCTATCCTCAATACACCACCGTTGAATATCATATCCCTCATACCGATCCTAATCCTCCTCCTTCCCCTGTTTTTCTCTTTCTGCTTGATACTTGTATCATCGAAGAAGAGATTAATTATCTCAAATCGGCTCTTGGTAGAGCAATTGGGCTTTTACCTGATAATGCTCTTGTTGGGTTTTTATCCTTCGGGACTCAGGTTCAGGTTCATGAATTGGGATTTTCTGATATGTCTAAAGTTTATGTTTTTCGCGGCTCCAAAGAGATTTCCAAAGATCAGATTTTGGAACAATTGGGTCTTGCTTCTTCTAATTCTGCTGCCAGGAGACCCATTAAAGGTGGTCCTGGCGGTATTGGTGGTGGTGCTCCTTTTCCCAATTCCGGTGTTTCACGATTTTTGTTGCCTGCTTCTGATTGCGAATACACTCTCAATGCGGTAATTGTAATTCAAATGATTTAAAATTGTGTTTTTTTTTTTTTTTTATGTGAATTGTGATTTTAATCGTGATTGTTTTTTCAGCTGTTGGAGGAATTGCAGAGAGATCAATGGCCTGTTCCACCTGGCAAACGACCTGCTCGATGTACCGGAGTTGCATTGAGTGTTGCAGCTGGATTGCTCAGTGCTTGTAATCCTGGGACTGGGGCTAGAATTATAGCTTTGGTTGGAGGGCCATGCACTGAAGGACCTGGCACGGTATATCAGTTTGTTTTCTTTTAATGTATGATTGATGATTTATGGCTGTTTCTATGCCTTGGATTTTGTTTTCGGTGAAAGAAAATTAGTTAGCGTTAGGAAAATTGTGTTCATTGTTAATCGAGCTGAATCATTACGAGCGGAATGATTTGTTAGGCGTATTGGTATCGAAGTTTCATAGTCATGTTGGTAGATACTGCACTTGCAACTAGATTATTGTTGAAAAATTTAAATATTTTATGTTGTTACTCATCATAGAAGTGTGTTTTTCTTGGTTTGGAATTGAAAGTTCAAAGTGTTGTGTGGTAAAATTGGAATAACTGGAAGGGAACTTTGGTTTATTTTCTGTTTGTTTTTGTGTATGTTGACAATCACTGAATAATCCATCCACAGAATATCTCTGATGTCGAGATTTTGATGTCAAAATTTCTTTGCAGATTGTGTCGAAAGAACTATCTGACCCAGTGCGTTCTCATAAAGATCTTGATAAAGATGCGGCACCTTACTTTAAGAAAGCAGTGAAGTTTTATGAGGGTCTTGCAAAACAGCTGGTTAACCAGGGTCATGTTTTAGATCTTTTTGCATCAGCACTTGATCAGGTTTGTGCCACTTATAATTTTCTCATACTTCTGTAATTATTTCTCTTGTTAGTTGGATATGGAATGCGTGTGTGCAGATCAGATACAGTGCTCGCTAAGGCTTTCTGAGACATATAGTGTTAGTTCTGATCATCAAATATAATAATATTACCATGCAGCTCAATTTTTCCAAACTCCACATTAGAAGGCATCTAATCCAGCATTTCTGCTGAGTGGTTTGACAGTTTCCATGCTTCTGTTTTTCTGAAAATGTGCTTTTTAAACAGTTTTGCATGCACTTGGATAGTCTTTGAAATGCAACAAATCATTCTTTTTTTTTTTAAAATAAATTTTCCATATATATATATATGTTTTTTTTTTTATATATACTTAAGTTGAAGACTCTTCATTAAAATAATCCTAAACAAACGGACCTTATAATTTATCCCATTTTTGTGATACATTAATTAGAACCATGTTATCCATAACATTCCTTACGGGAAAGTTTTTAGGCTTACTTAAGTATAGGTTCTGAAGTCTGAACTTACCTTTGTTTCTCCCTAACCGGCAATGCTTGGCTACAGGACCTGTAAATTTATATATTCAACGTGGTTAATACATCCATCTGGGTGTTCGTATTGACGGCATTGGGTATTCTTACTGTGAATCATGTTGTTAAATAGCAGCTATGGCGGCGCTATACTGCTATAGCGTAGCAGAATTTGGATGAACCGTTGTTATTCGGTGATCCGCTATTTAGTACAAATGTTTTCATATAGCTGCTATAGTGGTGCTATAGCACTATCCCATCGCATATTTTTAATAACAACCCACTATCCGAGATTGACAACATCATTGAATTGCAAGAAATAATTTGTTTGTTATGCAGTAGTAATTCATGAAAATTGTTAGTCAGTATATTGTCACATTGTTGCATTGAGTTTGAAAAACAATTCGGAGCTAATTATGCTCATTCTTTGTTTTGTGCTGATTCATGGTTATTTTATATTTTAGGTTGGAGTTGCAGAAATGAAAGTCGCAGTTGAAAGAACTGGTGGCCTTGTTGTCCTGTCTGAAAGTTTTGGTCATTCAGTCTTCAAGGACTCTTTTAAGCGTGTTTTTGAGGATGGGGAGCAATCTCTTGGTCTCTGTTTCAAGTGAGCATTCTCTCATTTCAAATGTTCTAATGATAGTTTGTTATTATTATATAGTTACATTTTTTTCTGTCCCTCCTCCTCGCCTGTTGTTATTTCTTATTTTTCAGTTATACTTGTTGGGTGCTGCAGATGATTGGTGCCAAGTGAGATGCCAACATAGTTGGGACGTCTCTTGGCATGATGATGCTTCTTTTTTCTCAAGGCATAACGACGTTTTTGCACCACAACTTTTGTTTTAAATTATTTTTCTGTATCCTTGTCTCTTGTTCTCCCTACATATCGTTTATCAGAGACGATCACTGCTAATGTGTTTATGTTTCAGTGGGACCCTTGAGATAAATTGCTCAAAGGAAATCAAAATTCAGGGAATTGTTGGACCTTGCACATCGATGGAGAAGGTTAGATAATTTATGTTTGAACTCTTCATTTTGTGTTGCTTTTTGATTCTTGAATTAGAGATTGTGTTGGATCAAAGAATTAGACTGAATCAGAGCATGATATGTCTGGATTTTAATTTTTACTCACATACTGCAGAAAGGACCTTCTGTTGCTGATACCGCCATAGGAGAGGGGAACACAACAATATGGAAGATGTGTGGTCTTGACAAGAGTACATGCTTGACTGTGATGTTTGATCTTTCATCAAGTGATCGTTCAAATACTCCAGGTGGTGTCAACCCACAACTGTACCTGCAGTTCCTTACAAGGTTATGTTGGGCAAATTTTGTAAATAGGATCTTCATATAGATGATTTTGTGTGTCTTTCCACTATTTCATTGGGTCTTGAGCATTAATAATGGTCATGGTCTTATTGCAGTTACCAGGGCCCAGATGGTCAATTAGTGCTTCGTGCGACAACAGTAACTAGAAGATGGGTAGATAGTGCTGTTAGCTCTGAGGTAGTTCCAGTCTTTTTTATGTCTGTGGCTGTGGATGGCAGTTCATTCGTCGATGTGATAGAAATATTTGGAACTCCTAAACTATCTTTCTGTAAAGAAGCATGAAAATTATACTCTTTCATCATGTTTTCAAGTATGATTTTCAAGCTATGTCATGCAGAATTTCGGATACCTAATCTAAATGTTTGAATTTACATGCATTTCTTGTGTATATCTATGACGTTTCCTGAATGACATGTTTATTCTCTAATGATTGGTGATATATGACAATTATTTGTTTACATTGAGATTCTTAAATTGATTAATAACAGGATTTTAATTACTTACATTATTGTGTTATTCAGGAATTGGCTCAAGGATTTGACCAAGAAACTGCTGCAGTTGTAATGGCTAGATATGCTTCTCTGAAAATGGAGACAGAGGTATGCGATAAGCCGTCTTACTATCTTTTGTTCTCAGTATTCCTAAAACACATTCAGATTTATTTACTCAAGCAGCTCCTGGGAAGTATATATTTGTTGAAATGAATGCTAGTGGGGAGTTTAAGTAAAACACAAAATTAGGTGAATAGCTTTGATATTGATGGTTTTGATGAAATTTGTGCTTGTTCAATTGTTTTGCTAATAATATGCTAAAAATTACGGTTTCATCAAATGTAAAATTCAAGTTGTTGGCCATGTATTTTATATGCATTTGCGGCGAAAATTTCAAGTCAACATATATAAATAAATACCTTACTGAGCATCAATTTTATTTGATCAGGAAACATTTGATTGCACACGGTGGTTGGATAGGTTCCTCATTCGCCTCTGTTCTAAGTTTGGGGATTACCGCAAGGATGATCCATCATCTTTTACATTAAATCCATCATTTTCTCTTTTCCCCCAGTTTATGTTCAATCTGCGACGCTCACAGTTTGTACAGGTACCTGTTATTGTTGTTTTCTTCCTGTTCTGCAGTCCTAATAGTTAGCTGATTTATGGTGAAATATATTTACAGGTTTTTAACAACAGTCCAGATGAGACTGCATACTTTCGCATGTTGTTAAACCGGGAAAATATTAATAATGCGGCTGTCATGATTCAGCCATCACTAATATCATATTCATTTAATTCACTGCCTGCACCAGCATTGTTGGATGTGGCTTCCATTGCTGCAGACCGGATTCTGTTGCTAGATTCATATTTTAGTGTGGTTATTTTTCATGGGATGACAATAGCTCAATGGCGCAACTTGGGATATCAGAACCAACCAGAACACCAGGTTTGTGTGCAGTCATGCCCTACTAAAGAAATTGCTGTTACCTGAGAATTCTGCTCACAAATTATCTTTGTATATATTTTACAATTTAATCTGTAAGAGCAGTAGTTTCTTTCTGTTAGTTTTGTGGACGGTGTTTTGCTTAGAGGCATTTTCGTAGTTGGTGTCAAGTGTTGCATTTACCAGTATTCCTTTTCTCTCTCTGCTGTTAACTTTAATTTATGGTACAGGCTTTTGCACAACTGTTACGAGCTCCACAAGATGATTCCCAAGCAATAATTAGAGATCGGTTTCCTGTTCCTAGATTGGTAGTGTGTGATCAACACGGTTCCCAGGTCAGTATTGTTTCTTACCCAAATTATTCATACCATGAGCAATACTGATGAGTATTTTAAACTCTTTGCAATATATTGTCCGTATTTTCATCCCTTTTGTTAATCCTTGAGTCAAGATTTTTCATAATAGGAAACTTACTAGGGTTTCATTGATGTCTTTAACAGGCTAGATTTTTATTAGCAAAACTGAATCCGTCAGCAACATATAATAATGCGCACGAGATGGCTGCTGGTTCAGATGTAATCTTTACTGATGATGTTAGCCTTCAAGTTTTCTTTGAGCATCTGCAAAGGCTGGCTGTCCAATCTTGA
Protein sequence

>MS.gene77559.t1

MSEMANTDPEGIDGVRMTWNVWPRSKVESSKCVIPLAATISLIRSHPDIPSLPYAPLRCKTCTSILNPYSRVDFTAKIWICPFCYQRNHFPPHYNAISETHLPGELYPQYTTVEYHIPHTDPNPPPSPVFLFLLDTCIIEEEINYLKSALGRAIGLLPDNALVGFLSFGTQVQVHELGFSDMSKVYVFRGSKEISKDQILEQLGLASSNSAARRPIKGGPGGIGGGAPFPNSGVSRFLLPASDCEYTLNALLEELQRDQWPVPPGKRPARCTGVALSVAAGLLSACNPGTGARIIALVGGPCTEGPGTIVSKELSDPVRSHKDLDKDAAPYFKKAVKFYEGLAKQLVNQGHVLDLFASALDQVGVAEMKVAVERTGGLVVLSESFGHSVFKDSFKRVFEDGEQSLGLCFNGTLEINCSKEIKIQGIVGPCTSMEKKGPSVADTAIGEGNTTIWKMCGLDKSTCLTVMFDLSSSDRSNTPGGVNPQLYLQFLTSYQGPDGQLVLRATTVTRRWVDSAVSSEELAQGFDQETAAVVMARYASLKMETEETFDCTRWLDRFLIRLCSKFGDYRKDDPSSFTLNPSFSLFPQFMFNLRRSQFVQVFNNSPDETAYFRMLLNRENINNAAVMIQPSLISYSFNSLPAPALLDVASIAADRILLLDSYFSVVIFHGMTIAQWRNLGYQNQPEHQAFAQLLRAPQDDSQAIIRDRFPVPRLVVCDQHGSQARFLLAKLNPSATYNNAHEMAAGSDVIFTDDVSLQVFFEHLQRLAVQS