Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79918.t1 | XP_003601724.1 | 97.1 | 771 | 5 | 1 | 1 | 754 | 1 | 771 | 0.00E+00 | 1502.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79918.t1 | Q4PE39 | 47.7 | 774 | 366 | 8 | 8 | 752 | 5 | 768 | 2.3e-211 | 736.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79918.t1 | G7JBC0 | 97.1 | 771 | 5 | 1 | 1 | 754 | 1 | 771 | 0.0e+00 | 1502.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene79918 | MS.gene030925 | PPI |
| MS.gene002097 | MS.gene79918 | PPI |
| MS.gene79918 | MS.gene072012 | PPI |
| MS.gene75647 | MS.gene79918 | PPI |
| MS.gene050786 | MS.gene79918 | PPI |
| MS.gene79918 | MS.gene000668 | PPI |
| MS.gene77559 | MS.gene79918 | PPI |
| MS.gene029309 | MS.gene79918 | PPI |
| MS.gene022779 | MS.gene79918 | PPI |
| MS.gene79918 | MS.gene47907 | PPI |
| MS.gene79918 | MS.gene029309 | PPI |
| MS.gene91383 | MS.gene79918 | PPI |
| MS.gene072583 | MS.gene79918 | PPI |
| MS.gene79918 | MS.gene67216 | PPI |
| MS.gene047149 | MS.gene79918 | PPI |
| MS.gene79918 | MS.gene76208 | PPI |
| MS.gene79918 | MS.gene93824 | PPI |
| MS.gene79918 | MS.gene045327 | PPI |
| MS.gene065040 | MS.gene79918 | PPI |
| MS.gene79918 | MS.gene27948 | PPI |
| MS.gene49989 | MS.gene79918 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79918.t1 | MTR_3g084740 | 97.147 | 771 | 5 | 1 | 1 | 754 | 1 | 771 | 0.0 | 1543 |
| MS.gene79918.t1 | MTR_3g084740 | 96.387 | 692 | 8 | 1 | 1 | 675 | 1 | 692 | 0.0 | 1376 |
| MS.gene79918.t1 | MTR_8g011270 | 62.978 | 759 | 266 | 5 | 8 | 753 | 7 | 763 | 0.0 | 995 |
| MS.gene79918.t1 | MTR_1g105605 | 43.490 | 768 | 393 | 12 | 4 | 753 | 1 | 745 | 0.0 | 616 |
| MS.gene79918.t1 | MTR_6g452520 | 71.642 | 134 | 37 | 1 | 529 | 662 | 7 | 139 | 5.40e-61 | 203 |
| MS.gene79918.t1 | MTR_6g452510 | 71.642 | 134 | 37 | 1 | 529 | 662 | 7 | 139 | 5.40e-61 | 203 |
| MS.gene79918.t1 | MTR_6g452530 | 71.642 | 134 | 37 | 1 | 529 | 662 | 7 | 139 | 6.11e-61 | 203 |
| MS.gene79918.t1 | MTR_7g110640 | 23.954 | 693 | 420 | 23 | 56 | 717 | 182 | 798 | 6.31e-31 | 130 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79918.t1 | AT1G05520 | 77.510 | 787 | 140 | 5 | 1 | 754 | 1 | 783 | 0.0 | 1254 |
| MS.gene79918.t1 | AT3G23660 | 78.210 | 771 | 145 | 6 | 1 | 754 | 1 | 765 | 0.0 | 1239 |
| MS.gene79918.t1 | AT3G23660 | 75.659 | 797 | 145 | 7 | 1 | 754 | 1 | 791 | 0.0 | 1225 |
| MS.gene79918.t1 | AT4G14160 | 75.933 | 777 | 159 | 5 | 1 | 754 | 1 | 772 | 0.0 | 1209 |
| MS.gene79918.t1 | AT4G14160 | 75.835 | 778 | 159 | 6 | 1 | 754 | 1 | 773 | 0.0 | 1204 |
| MS.gene79918.t1 | AT4G14160 | 73.267 | 606 | 134 | 5 | 1 | 583 | 1 | 601 | 0.0 | 895 |
| MS.gene79918.t1 | AT2G21630 | 57.087 | 762 | 301 | 10 | 10 | 753 | 8 | 761 | 0.0 | 860 |
| MS.gene79918.t1 | AT5G43670 | 43.358 | 798 | 387 | 11 | 10 | 753 | 7 | 793 | 0.0 | 662 |
| MS.gene79918.t1 | AT4G01810 | 23.300 | 691 | 437 | 24 | 56 | 717 | 201 | 827 | 2.58e-34 | 141 |
| MS.gene79918.t1 | AT4G01810 | 23.300 | 691 | 437 | 24 | 56 | 717 | 201 | 827 | 2.58e-34 | 141 |
| MS.gene79918.t1 | AT4G01810 | 23.300 | 691 | 437 | 24 | 56 | 717 | 201 | 827 | 2.58e-34 | 141 |
Find 202 sgRNAs with CRISPR-Local
Find 412 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGATCTTTGGAAATCTCTT+TGG | 0.200075 | 3.1:-65057641 | None:intergenic |
| TTCGCCTCTGTTCTAAGTTT+GGG | 0.207149 | 3.1:+65061557 | MS.gene79918:CDS |
| GATTTCCAAAGATCAGATTT+TGG | 0.249496 | 3.1:+65057648 | MS.gene79918:CDS |
| AAATCGTGAAACACCGGAAT+TGG | 0.258703 | 3.1:-65057758 | None:intergenic |
| ATTCGCCTCTGTTCTAAGTT+TGG | 0.272083 | 3.1:+65061556 | MS.gene79918:CDS |
| CTCAAAGGAAATCAAAATTC+AGG | 0.273413 | 3.1:+65060199 | MS.gene79918:CDS |
| TTGTTCCAAAATCTGATCTT+TGG | 0.274830 | 3.1:-65057653 | None:intergenic |
| TTACAACTGCAGCAGTTTCT+TGG | 0.303545 | 3.1:-65061119 | None:intergenic |
| TAGATATGCTTCTCTGAAAA+TGG | 0.316254 | 3.1:+65061146 | MS.gene79918:CDS |
| TCAGGTTCAGGTTCATGAAT+TGG | 0.321846 | 3.1:+65057579 | MS.gene79918:CDS |
| CGTTGTAATGAGGTGGAAAA+TGG | 0.324821 | 3.1:-65057333 | None:intergenic |
| TCGGCTCTTGGTAGAGCAAT+TGG | 0.333563 | 3.1:+65057511 | MS.gene79918:CDS |
| TTGCTCAGTGCTTGTAATCC+TGG | 0.340613 | 3.1:+65057990 | MS.gene79918:CDS |
| CAGGTTCAGGTTCATGAATT+GGG | 0.353755 | 3.1:+65057580 | MS.gene79918:CDS |
| ACAGGGGAAGGAGGAGGATT+AGG | 0.354971 | 3.1:-65057433 | None:intergenic |
| TTCACTGCTTTCTTAAAGTA+AGG | 0.356416 | 3.1:-65058581 | None:intergenic |
| TGCACACAAACCTGGTGTTC+TGG | 0.358942 | 3.1:-65062006 | None:intergenic |
| GGAGGATTAGGATCGGTATG+AGG | 0.359326 | 3.1:-65057421 | None:intergenic |
| ATCAAAATTCAGGGAATTGT+TGG | 0.363724 | 3.1:+65060209 | MS.gene79918:CDS |
| CGAAAGTATGCAGTCTCATC+TGG | 0.366629 | 3.1:-65061769 | None:intergenic |
| TTGATTTCACCGCTAAGATC+TGG | 0.369179 | 3.1:+65057284 | MS.gene79918:CDS |
| GTCGCAGATTGAACATAAAC+TGG | 0.370469 | 3.1:-65061639 | None:intergenic |
| TTACCTGATAATGCTCTTGT+TGG | 0.375458 | 3.1:+65057538 | MS.gene79918:CDS |
| GTTGTCCTGTCTGAAAGTTT+TGG | 0.375902 | 3.1:+65059761 | MS.gene79918:CDS |
| CCGATCTCTAATTATTGCTT+GGG | 0.380772 | 3.1:-65062282 | None:intergenic |
| TGGTTCCGTTGATAACAAAA+TGG | 0.383931 | 3.1:-65057313 | None:intergenic |
| CGAAGCACTAATTGACCATC+TGG | 0.389898 | 3.1:-65060683 | None:intergenic |
| GTGAAATCAACGCGGGAGTA+AGG | 0.395323 | 3.1:-65057271 | None:intergenic |
| GCTGCCAGGAGACCTATTAA+AGG | 0.395909 | 3.1:+65057700 | MS.gene79918:CDS |
| ACCGATCTCTAATTATTGCT+TGG | 0.397173 | 3.1:-65062283 | None:intergenic |
| CTTTGAGCATCTGCAAAGGC+TGG | 0.397327 | 3.1:+65062625 | MS.gene79918:CDS |
| CTATCATCTGCCCTCAAGAT+TGG | 0.398230 | 3.1:-65062652 | None:intergenic |
| GTGCTTGTAATCCTGGGACT+GGG | 0.398443 | 3.1:+65057997 | MS.gene79918:CDS |
| GGTCGTTTGCCAGGTGGAAC+AGG | 0.406022 | 3.1:-65057927 | None:intergenic |
| TTGCCCAACATAACCTTGTA+AGG | 0.406762 | 3.1:-65060554 | None:intergenic |
| CCGCCAGGACCACCTTTAAT+AGG | 0.408601 | 3.1:-65057712 | None:intergenic |
| ACTGCCTGCACCAGCATTGT+TGG | 0.412650 | 3.1:+65061870 | MS.gene79918:CDS |
| ATGGTCTTATTGCAGTTACC+AGG | 0.412803 | 3.1:+65060658 | MS.gene79918:intron |
| AACCCAACAAGAGCATTATC+AGG | 0.413969 | 3.1:-65057541 | None:intergenic |
| GAGAGGGGAACACAACAATA+TGG | 0.415405 | 3.1:+65060421 | MS.gene79918:CDS |
| ACTTTCGCATGTTGTTAAAC+CGG | 0.419078 | 3.1:+65061785 | MS.gene79918:CDS |
| TACCTGATAATGCTCTTGTT+GGG | 0.419336 | 3.1:+65057539 | MS.gene79918:CDS |
| GAGGATGGGGAGCAATCTCT+TGG | 0.420007 | 3.1:+65059821 | MS.gene79918:CDS |
| AGTGCTTGTAATCCTGGGAC+TGG | 0.428437 | 3.1:+65057996 | MS.gene79918:CDS |
| ATAAGGAAGACTGGGGATAT+CGG | 0.430962 | 3.1:-65057209 | None:intergenic |
| TGCTCAGTGCTTGTAATCCT+GGG | 0.433431 | 3.1:+65057991 | MS.gene79918:CDS |
| GGCGAGTGGGATAACGCATT+TGG | 0.433530 | 3.1:-65057158 | None:intergenic |
| TCGGTTTCCTGTTCCTAGAT+TGG | 0.434541 | 3.1:+65062301 | MS.gene79918:CDS |
| AATCGTGAAACACCGGAATT+GGG | 0.437601 | 3.1:-65057757 | None:intergenic |
| CGGCTCTTGGTAGAGCAATT+GGG | 0.438079 | 3.1:+65057512 | MS.gene79918:CDS |
| TCCGTATGACATGGAACGTC+TGG | 0.441775 | 3.1:+65057113 | MS.gene79918:CDS |
| TGCAAAACAGCTGGTTAACC+AGG | 0.443952 | 3.1:+65058619 | MS.gene79918:CDS |
| TGGGGCTAGAATTATAGCTT+TGG | 0.450259 | 3.1:+65058016 | MS.gene79918:CDS |
| CATCGAGCAGGTCGTTTGCC+AGG | 0.456521 | 3.1:-65057936 | None:intergenic |
| TGATCACACACTACCAATCT+AGG | 0.458169 | 3.1:-65062314 | None:intergenic |
| AATAGCTCAATGGCGCAACT+TGG | 0.459058 | 3.1:+65061969 | MS.gene79918:CDS |
| AAAGGTGGTCCTGGCGGTAT+TGG | 0.459360 | 3.1:+65057718 | MS.gene79918:CDS |
| AGGGTTGAGAATGGAGGTGC+AGG | 0.459989 | 3.1:-65057251 | None:intergenic |
| AGAGATTAATTATCTCAAAT+CGG | 0.462983 | 3.1:+65057492 | MS.gene79918:CDS |
| GGTGGTCCTGGCGGTATTGG+TGG | 0.463044 | 3.1:+65057721 | MS.gene79918:CDS |
| TAAGGAAGACTGGGGATATC+GGG | 0.463197 | 3.1:-65057208 | None:intergenic |
| CACACTACCAATCTAGGAAC+AGG | 0.463957 | 3.1:-65062308 | None:intergenic |
| ATTTGATTGCACACGGTGGT+TGG | 0.465256 | 3.1:+65061522 | MS.gene79918:CDS |
| TATCGGGATGAGAACGGATG+AGG | 0.465331 | 3.1:-65057192 | None:intergenic |
| AATTATCTCAAATCGGCTCT+TGG | 0.465455 | 3.1:+65057499 | MS.gene79918:CDS |
| ATGAATCTAGCAACAGAATC+CGG | 0.466759 | 3.1:-65061915 | None:intergenic |
| AGAATTATAGCTTTGGTTGG+AGG | 0.468089 | 3.1:+65058023 | MS.gene79918:CDS |
| CAGAATCCGGTCTGCAGCAA+TGG | 0.471839 | 3.1:-65061902 | None:intergenic |
| GATGCTCAAAGAAAACTTGA+AGG | 0.476433 | 3.1:-65062613 | None:intergenic |
| GAATTATAGCTTTGGTTGGA+GGG | 0.477448 | 3.1:+65058024 | MS.gene79918:CDS |
| TTGCAACGGAGGGGTGCATA+AGG | 0.479670 | 3.1:-65057226 | None:intergenic |
| GGTCCTGGCGGTATTGGTGG+TGG | 0.482603 | 3.1:+65057724 | MS.gene79918:CDS |
| CTTCTTCTAATTCTGCTGCC+AGG | 0.483261 | 3.1:+65057686 | MS.gene79918:CDS |
| TGTACCTGCAGTTCCTTACA+AGG | 0.483740 | 3.1:+65060541 | MS.gene79918:CDS |
| AAAGTCGCAGTTGAAAGAAC+TGG | 0.484739 | 3.1:+65059731 | MS.gene79918:CDS |
| AGAAACTGCTGCAGTTGTAA+TGG | 0.486703 | 3.1:+65061122 | MS.gene79918:CDS |
| GCTAGAATTATAGCTTTGGT+TGG | 0.486748 | 3.1:+65058020 | MS.gene79918:CDS |
| TCTGTTGCTGATACCGTCAT+AGG | 0.487815 | 3.1:+65060399 | MS.gene79918:CDS |
| TGCACCAGCATTGTTGGATG+TGG | 0.489325 | 3.1:+65061876 | MS.gene79918:CDS |
| ACCACCTTTAATAGGTCTCC+TGG | 0.489994 | 3.1:-65057704 | None:intergenic |
| TGAGGGTCTTGCAAAACAGC+TGG | 0.493827 | 3.1:+65058610 | MS.gene79918:CDS |
| CTTTCGCATGTTGTTAAACC+GGG | 0.497065 | 3.1:+65061786 | MS.gene79918:CDS |
| CCCAAGCAATAATTAGAGAT+CGG | 0.501519 | 3.1:+65062282 | MS.gene79918:CDS |
| ATTGCACACGGTGGTTGGAT+AGG | 0.502936 | 3.1:+65061527 | MS.gene79918:CDS |
| GAGGGGTGCATAAGGAAGAC+TGG | 0.504207 | 3.1:-65057218 | None:intergenic |
| ACGGACTCCGTCGATTCCCT+CGG | 0.506453 | 3.1:-65057095 | None:intergenic |
| GGCTGGCTGTCCAATCTTGA+GGG | 0.507848 | 3.1:+65062642 | MS.gene79918:CDS |
| GGATTTAATGTAAAAGATGA+TGG | 0.509344 | 3.1:-65061598 | None:intergenic |
| ATCATCAACGATGTCGGAGA+TGG | 0.510358 | 3.1:+65057060 | None:intergenic |
| CGACAACAGTAACTAGAAGA+TGG | 0.513117 | 3.1:+65060708 | MS.gene79918:CDS |
| CCTTTGAGCAATTTATCTCA+AGG | 0.514111 | 3.1:-65060184 | None:intergenic |
| TCAAAGGAAATCAAAATTCA+GGG | 0.514523 | 3.1:+65060200 | MS.gene79918:CDS |
| GGAACTGCAGGTACAGTTGT+GGG | 0.516592 | 3.1:-65060533 | None:intergenic |
| TGCTTGTAATCCTGGGACTG+GGG | 0.517545 | 3.1:+65057998 | MS.gene79918:CDS |
| AGTTGTGGGTTGACACCACC+TGG | 0.520955 | 3.1:-65060519 | None:intergenic |
| TGTTGGACCTTGCACATCGA+TGG | 0.521951 | 3.1:+65060226 | MS.gene79918:CDS |
| ATAAACTGATATACCGTGCC+AGG | 0.522605 | 3.1:-65058062 | None:intergenic |
| AGGCTGGCTGTCCAATCTTG+AGG | 0.522676 | 3.1:+65062641 | MS.gene79918:CDS |
| TGTGTTCCCCTCTCCTATGA+CGG | 0.522842 | 3.1:-65060412 | None:intergenic |
| TGCAGTTACCAGGGCCCAGA+TGG | 0.523337 | 3.1:+65060668 | MS.gene79918:intron |
| AGACCTATTAAAGGTGGTCC+TGG | 0.525708 | 3.1:+65057709 | MS.gene79918:CDS |
| ACATCCAACAATGCTGGTGC+AGG | 0.529135 | 3.1:-65061874 | None:intergenic |
| GTTGCATTGAGTGTTGCAGC+TGG | 0.529823 | 3.1:+65057966 | MS.gene79918:CDS |
| TGGCTTCCATTGCTGCAGAC+CGG | 0.530088 | 3.1:+65061896 | MS.gene79918:CDS |
| GTTGGAGGGCCATGCACTGA+AGG | 0.531152 | 3.1:+65058038 | MS.gene79918:CDS |
| GAGGATTAGGATCGGTATGA+GGG | 0.531440 | 3.1:-65057420 | None:intergenic |
| AAACGACCTGCTCGATGTAC+CGG | 0.533519 | 3.1:+65057942 | MS.gene79918:CDS |
| GCACCACCACCAATACCGCC+AGG | 0.534883 | 3.1:-65057727 | None:intergenic |
| CTTTGAGCAATTTATCTCAA+GGG | 0.536388 | 3.1:-65060183 | None:intergenic |
| GAAACACCGGAATTGGGAAA+AGG | 0.537131 | 3.1:-65057751 | None:intergenic |
| GTGCCAGGTCCTTCAGTGCA+TGG | 0.538214 | 3.1:-65058047 | None:intergenic |
| AATGCGCACGAGATGGCTGC+TGG | 0.539530 | 3.1:+65062560 | MS.gene79918:CDS |
| ATTGCTTGGGAATCATCTTG+TGG | 0.540119 | 3.1:-65062269 | None:intergenic |
| AGGGAGATTGTGGCGGCGAG+TGG | 0.542010 | 3.1:-65057172 | None:intergenic |
| GTGTGATCAACACGGTTCCC+AGG | 0.543667 | 3.1:+65062328 | MS.gene79918:CDS |
| AAGATGATGGATCATCTTTG+CGG | 0.544699 | 3.1:-65061585 | None:intergenic |
| ATAGCTCAATGGCGCAACTT+GGG | 0.545562 | 3.1:+65061970 | MS.gene79918:CDS |
| ACTTAGAACAGAGGCGAATG+AGG | 0.545572 | 3.1:-65061552 | None:intergenic |
| TCGCCTCTGTTCTAAGTTTG+GGG | 0.545724 | 3.1:+65061558 | MS.gene79918:CDS |
| ATAATTCTAGCCCCAGTCCC+AGG | 0.547661 | 3.1:-65058008 | None:intergenic |
| TCAGAAATCGCGTTGTAATG+AGG | 0.548123 | 3.1:-65057343 | None:intergenic |
| GGGCCATGCACTGAAGGACC+TGG | 0.548285 | 3.1:+65058044 | MS.gene79918:CDS |
| AGGGGTGCATAAGGAAGACT+GGG | 0.548496 | 3.1:-65057217 | None:intergenic |
| ATAACCTTGTAAGGAACTGC+AGG | 0.554745 | 3.1:-65060545 | None:intergenic |
| CGGACTCCGTCGATTCCCTC+GGG | 0.556274 | 3.1:-65057094 | None:intergenic |
| TATTCAACGGTGGTGTATTG+AGG | 0.556523 | 3.1:-65057391 | None:intergenic |
| GAGTGGGATAACGCATTTGG+AGG | 0.557533 | 3.1:-65057155 | None:intergenic |
| AGATCTTTATGAGAACGCAC+TGG | 0.557658 | 3.1:-65058542 | None:intergenic |
| AGAACGGATGAGGGAGATTG+TGG | 0.559381 | 3.1:-65057182 | None:intergenic |
| CTAATTGACCATCTGGGCCC+TGG | 0.560974 | 3.1:-65060676 | None:intergenic |
| TATTGAGGATAGAGTTCACC+AGG | 0.561257 | 3.1:-65057376 | None:intergenic |
| CACAAACCTGGTGTTCTGGT+TGG | 0.561924 | 3.1:-65062002 | None:intergenic |
| GCGGGAGTAAGGGTTGAGAA+TGG | 0.562790 | 3.1:-65057260 | None:intergenic |
| GATCAATGGCCTGTTCCACC+TGG | 0.564462 | 3.1:+65057918 | MS.gene79918:CDS |
| GCTGATACCGTCATAGGAGA+GGG | 0.567553 | 3.1:+65060405 | MS.gene79918:CDS |
| TGAAATCAACGCGGGAGTAA+GGG | 0.568126 | 3.1:-65057270 | None:intergenic |
| GAAGCCACATCCAACAATGC+TGG | 0.572390 | 3.1:-65061880 | None:intergenic |
| GCAACTCCGGTACATCGAGC+AGG | 0.572772 | 3.1:-65057948 | None:intergenic |
| ATTTCTGAAACTCATCTCCC+TGG | 0.574744 | 3.1:+65057358 | MS.gene79918:CDS |
| GTTATTCAGGAATTGGCTCA+AGG | 0.575831 | 3.1:+65061090 | MS.gene79918:intron |
| GGGAGATTGTGGCGGCGAGT+GGG | 0.576660 | 3.1:-65057171 | None:intergenic |
| ATATAATAATGCGCACGAGA+TGG | 0.576745 | 3.1:+65062553 | MS.gene79918:CDS |
| AACTTTCAGACAGGACAACA+AGG | 0.579452 | 3.1:-65059757 | None:intergenic |
| AGGAACTGCAGGTACAGTTG+TGG | 0.581947 | 3.1:-65060534 | None:intergenic |
| ATGGGATGACAATAGCTCAA+TGG | 0.585675 | 3.1:+65061959 | MS.gene79918:CDS |
| GCGACGCTCACAGTTTGTAC+AGG | 0.585828 | 3.1:+65061657 | MS.gene79918:CDS |
| ATCGGGATGAGAACGGATGA+GGG | 0.588713 | 3.1:-65057191 | None:intergenic |
| TGGTCTTATTGCAGTTACCA+GGG | 0.591873 | 3.1:+65060659 | MS.gene79918:intron |
| TCGACGGAGTCCGTATGACA+TGG | 0.594875 | 3.1:+65057104 | MS.gene79918:CDS |
| AATGACCAAAACTTTCAGAC+AGG | 0.595747 | 3.1:-65059766 | None:intergenic |
| AGTGATCGTTCAAATACTCC+AGG | 0.597059 | 3.1:+65060501 | MS.gene79918:CDS |
| AGGAATTGCAGAGAGATCAA+TGG | 0.601153 | 3.1:+65057904 | MS.gene79918:CDS |
| ACAGATCCCGAGGGAATCGA+CGG | 0.601592 | 3.1:+65057088 | MS.gene79918:CDS |
| TGCTGATACCGTCATAGGAG+AGG | 0.602389 | 3.1:+65060404 | MS.gene79918:CDS |
| ACCTTCTCCATCGATGTGCA+AGG | 0.603833 | 3.1:-65060233 | None:intergenic |
| TCGCAGATTGAACATAAACT+GGG | 0.603920 | 3.1:-65061638 | None:intergenic |
| GCATTATTATATGTTGCTGA+CGG | 0.604893 | 3.1:-65062542 | None:intergenic |
| TGGGGATATCGGGATGAGAA+CGG | 0.606733 | 3.1:-65057198 | None:intergenic |
| CCTTGAGATAAATTGCTCAA+AGG | 0.607083 | 3.1:+65060184 | MS.gene79918:CDS |
| AATGAATATGATATTAGTGA+TGG | 0.607798 | 3.1:-65061841 | None:intergenic |
| GATCTTTATGAGAACGCACT+GGG | 0.608467 | 3.1:-65058541 | None:intergenic |
| CCGGGAAAATATTAATAATG+CGG | 0.608982 | 3.1:+65061804 | MS.gene79918:CDS |
| GACAACAGTAACTAGAAGAT+GGG | 0.609204 | 3.1:+65060709 | MS.gene79918:CDS |
| ACCTTGCACATCGATGGAGA+AGG | 0.610130 | 3.1:+65060232 | MS.gene79918:CDS |
| GCCAGACGTTCCATGTCATA+CGG | 0.610591 | 3.1:-65057114 | None:intergenic |
| ATGCACTGAAGGACCTGGCA+CGG | 0.612108 | 3.1:+65058049 | MS.gene79918:CDS |
| TGGACAGATCCAGATCTTAG+CGG | 0.625634 | 3.1:-65057293 | None:intergenic |
| TTCTCTGAAAATGGAGACAG+AGG | 0.627078 | 3.1:+65061155 | MS.gene79918:CDS |
| GTCGCAGTTGAAAGAACTGG+TGG | 0.633285 | 3.1:+65059734 | MS.gene79918:CDS |
| ATGAGGGATATGATATTCAA+CGG | 0.634959 | 3.1:-65057404 | None:intergenic |
| TGCAACACTCAATGCAACTC+CGG | 0.636467 | 3.1:-65057961 | None:intergenic |
| AGGAAACATTTGATTGCACA+CGG | 0.637118 | 3.1:+65061515 | MS.gene79918:intron |
| GATGGCGAACACAGATCCCG+AGG | 0.639336 | 3.1:+65057078 | MS.gene79918:CDS |
| GAAATCGCGTTGTAATGAGG+TGG | 0.643805 | 3.1:-65057340 | None:intergenic |
| GAAGCACTAATTGACCATCT+GGG | 0.645330 | 3.1:-65060682 | None:intergenic |
| TCAGAACCAACCAGAACACC+AGG | 0.646048 | 3.1:+65061996 | MS.gene79918:CDS |
| TAAAGATCTTGATAAAGATG+CGG | 0.649605 | 3.1:+65058556 | MS.gene79918:CDS |
| GCCAGGAGACCTATTAAAGG+TGG | 0.649818 | 3.1:+65057703 | MS.gene79918:CDS |
| CCTATTAAAGGTGGTCCTGG+CGG | 0.655135 | 3.1:+65057712 | MS.gene79918:CDS |
| CGCAGATTGAACATAAACTG+GGG | 0.660034 | 3.1:-65061637 | None:intergenic |
| CGAGCAGGTCGTTTGCCAGG+TGG | 0.660104 | 3.1:-65057933 | None:intergenic |
| AGATAGTGCTGTTAGCTCTG+AGG | 0.662391 | 3.1:+65060733 | MS.gene79918:CDS |
| ATGACGGTATCAGCAACAGA+AGG | 0.668376 | 3.1:-65060396 | None:intergenic |
| AAAGATCTAAAACATGACCC+TGG | 0.670877 | 3.1:-65058637 | None:intergenic |
| GGAGTAAGGGTTGAGAATGG+AGG | 0.671591 | 3.1:-65057257 | None:intergenic |
| GCAAAACAGCTGGTTAACCA+GGG | 0.675809 | 3.1:+65058620 | MS.gene79918:CDS |
| CTTAGCGGTGAAATCAACGC+GGG | 0.678250 | 3.1:-65057278 | None:intergenic |
| ACGGATGAGGGAGATTGTGG+CGG | 0.679027 | 3.1:-65057179 | None:intergenic |
| CTGATACCGTCATAGGAGAG+GGG | 0.689842 | 3.1:+65060406 | MS.gene79918:CDS |
| GGAAGGAGGAGGATTAGGAT+CGG | 0.693230 | 3.1:-65057428 | None:intergenic |
| ATGGCGAACACAGATCCCGA+GGG | 0.694002 | 3.1:+65057079 | MS.gene79918:CDS |
| ACAACAATATGGAAGATGTG+TGG | 0.696066 | 3.1:+65060432 | MS.gene79918:CDS |
| GCAGATTGAACATAAACTGG+GGG | 0.697137 | 3.1:-65061636 | None:intergenic |
| AATCCCCAAACTTAGAACAG+AGG | 0.701622 | 3.1:-65061561 | None:intergenic |
| GATCGTTCAAATACTCCAGG+TGG | 0.701854 | 3.1:+65060504 | MS.gene79918:CDS |
| GAGGATTCTACTTTGCTACG+TGG | 0.707824 | 3.1:-65057136 | None:intergenic |
| TTGGTAGTGTGTGATCAACA+CGG | 0.729590 | 3.1:+65062320 | MS.gene79918:CDS |
| AGGGATATGATATTCAACGG+TGG | 0.744253 | 3.1:-65057401 | None:intergenic |
| AAACATTTGATTGCACACGG+TGG | 0.751378 | 3.1:+65061518 | MS.gene79918:CDS |
| TCTTAGCGGTGAAATCAACG+CGG | 0.800179 | 3.1:-65057279 | None:intergenic |
| ATTGAGGATAGAGTTCACCA+GGG | 0.804613 | 3.1:-65057375 | None:intergenic |
| GGGGTGCATAAGGAAGACTG+GGG | 0.813434 | 3.1:-65057216 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTCTTAAATTGATTAATAA+CGG | + | chr3.1:65061043-65061062 | MS.gene79918:intron | 10.0% |
| !! | TAATAATATGCTAAAAATTA+CGG | + | chr3.1:65061376-65061395 | MS.gene79918:intron | 10.0% |
| !! | AATTAATGTATCACAAAAAT+GGG | - | chr3.1:65059148-65059167 | None:intergenic | 15.0% |
| !! | TAAATTCAAACATTTAGATT+AGG | - | chr3.1:65060929-65060948 | None:intergenic | 15.0% |
| !! | TAATTAATGTATCACAAAAA+TGG | - | chr3.1:65059149-65059168 | None:intergenic | 15.0% |
| !! | TTAAAATAATCCTAAACAAA+CGG | + | chr3.1:65059108-65059127 | MS.gene79918:intron | 15.0% |
| !! | TTCTTAAATTGATTAATAAC+GGG | + | chr3.1:65061044-65061063 | MS.gene79918:intron | 15.0% |
| !! | TTTCAGTAAAACATAAAATT+GGG | + | chr3.1:65061296-65061315 | MS.gene79918:intron | 15.0% |
| !!! | ATAATTTAAAACAAAAGTTG+TGG | - | chr3.1:65060080-65060099 | None:intergenic | 15.0% |
| !!! | ATTCAAATGATTTAAAATTG+TGG | + | chr3.1:65057829-65057848 | MS.gene79918:intron | 15.0% |
| !!! | TCATGGTTATTTTATATTTT+AGG | + | chr3.1:65059691-65059710 | MS.gene79918:intron | 15.0% |
| !! | AAAACATTTGTACTAAATAG+CGG | - | chr3.1:65059451-65059470 | None:intergenic | 20.0% |
| !! | AAGTATGAGAAAATTATAAG+TGG | - | chr3.1:65058690-65058709 | None:intergenic | 20.0% |
| !! | AATGAATATGATATTAGTGA+TGG | - | chr3.1:65061844-65061863 | None:intergenic | 20.0% |
| !! | AGAGATTAATTATCTCAAAT+CGG | + | chr3.1:65057492-65057511 | MS.gene79918:CDS | 20.0% |
| !! | ATTGAGTTTGAAAAACAATT+CGG | + | chr3.1:65059634-65059653 | MS.gene79918:intron | 20.0% |
| !! | CAAAAATGGGATAAATTATA+AGG | - | chr3.1:65059135-65059154 | None:intergenic | 20.0% |
| !! | CGTTGAATATATAAATTTAC+AGG | - | chr3.1:65059288-65059307 | None:intergenic | 20.0% |
| !! | GAAAAATAAGAAATAACAAC+AGG | - | chr3.1:65059941-65059960 | None:intergenic | 20.0% |
| !! | GTAAATTTATATATTCAACG+TGG | + | chr3.1:65059288-65059307 | MS.gene79918:intron | 20.0% |
| !! | GTTTCAGTAAAACATAAAAT+TGG | + | chr3.1:65061295-65061314 | MS.gene79918:intron | 20.0% |
| !! | TAAAATTGGAATAAATGGAA+GGG | + | chr3.1:65058387-65058406 | MS.gene79918:intron | 20.0% |
| !! | TGTTATTAAAAATATGCGAT+GGG | - | chr3.1:65059507-65059526 | None:intergenic | 20.0% |
| !! | TTATGGTGAAATATATTTAC+AGG | + | chr3.1:65061732-65061751 | MS.gene79918:intron | 20.0% |
| !!! | AAATGTAAAATTCAAGTTGT+TGG | + | chr3.1:65061406-65061425 | MS.gene79918:intron | 20.0% |
| !!! | AATAAATCTGAATGTGTTTT+AGG | - | chr3.1:65061221-65061240 | None:intergenic | 20.0% |
| !!! | AATGTATGATTGATGATTTA+TGG | + | chr3.1:65058103-65058122 | MS.gene79918:intron | 20.0% |
| !!! | ATGTATTTTATATGCATTTG+CGG | + | chr3.1:65061431-65061450 | MS.gene79918:intron | 20.0% |
| !!! | ATTTTTCAGTTATACTTGTT+GGG | + | chr3.1:65059954-65059973 | MS.gene79918:intron | 20.0% |
| !!! | GGTTATTTTATATTTTAGGT+TGG | + | chr3.1:65059695-65059714 | MS.gene79918:intron | 20.0% |
| !!! | TAATTATTTCTCTTGTTAGT+TGG | + | chr3.1:65058713-65058732 | MS.gene79918:intron | 20.0% |
| !!! | TATTTTTCAGTTATACTTGT+TGG | + | chr3.1:65059953-65059972 | MS.gene79918:intron | 20.0% |
| !!! | TTAACTTTAATTTATGGTAC+AGG | + | chr3.1:65062223-65062242 | MS.gene79918:intron | 20.0% |
| !!! | TTGTTATTAAAAATATGCGA+TGG | - | chr3.1:65059508-65059527 | None:intergenic | 20.0% |
| ! | AAAGAAAATTAGTTAGCGTT+AGG | + | chr3.1:65058158-65058177 | MS.gene79918:intron | 25.0% |
| ! | CATGTTTATTCTCTAATGAT+TGG | + | chr3.1:65060989-65061008 | MS.gene79918:intron | 25.0% |
| ! | GATCAAATAAAATTGATGCT+CGG | - | chr3.1:65061495-65061514 | None:intergenic | 25.0% |
| ! | GCAAATGCATATAAAATACA+TGG | - | chr3.1:65061432-65061451 | None:intergenic | 25.0% |
| ! | GGATTTAATGTAAAAGATGA+TGG | - | chr3.1:65061601-65061620 | None:intergenic | 25.0% |
| ! | GTAAAATTGGAATAAATGGA+AGG | + | chr3.1:65058386-65058405 | MS.gene79918:intron | 25.0% |
| ! | GTCAATGTGATAGAAATATT+TGG | + | chr3.1:65060803-65060822 | MS.gene79918:intron | 25.0% |
| ! | TAAAGATCTTGATAAAGATG+CGG | + | chr3.1:65058556-65058575 | MS.gene79918:CDS | 25.0% |
| ! | TAACAGCAATTTCTTTAGTA+GGG | - | chr3.1:65062038-65062057 | None:intergenic | 25.0% |
| ! | TAATGTGTTTATGTTTCAGT+GGG | + | chr3.1:65060159-65060178 | MS.gene79918:intron | 25.0% |
| ! | TCAAAGGAAATCAAAATTCA+GGG | + | chr3.1:65060200-65060219 | MS.gene79918:CDS | 25.0% |
| ! | TCATAATAGGAAACTTACTA+GGG | + | chr3.1:65062471-65062490 | MS.gene79918:intron | 25.0% |
| ! | TCTCTGATAAACAATATGTA+GGG | - | chr3.1:65060129-65060148 | None:intergenic | 25.0% |
| ! | TCTTTACAGAAAGATAGTTT+AGG | - | chr3.1:65060833-65060852 | None:intergenic | 25.0% |
| ! | TGTGGTAAAATTGGAATAAA+TGG | + | chr3.1:65058382-65058401 | MS.gene79918:intron | 25.0% |
| ! | TTATGAAAAATCTTGACTCA+AGG | - | chr3.1:65062457-65062476 | None:intergenic | 25.0% |
| ! | TTCATAATAGGAAACTTACT+AGG | + | chr3.1:65062470-65062489 | MS.gene79918:intron | 25.0% |
| !! | CTGCTGTTAACTTTAATTTA+TGG | + | chr3.1:65062217-65062236 | MS.gene79918:intron | 25.0% |
| !! | CTTACATTATTGTGTTATTC+AGG | + | chr3.1:65061077-65061096 | MS.gene79918:intron | 25.0% |
| !! | GAGTCAAGATTTTTCATAAT+AGG | + | chr3.1:65062458-65062477 | MS.gene79918:intron | 25.0% |
| !! | TTATTGTGTTATTCAGGAAT+TGG | + | chr3.1:65061083-65061102 | MS.gene79918:intron | 25.0% |
| !! | TTGTTGGGTTTTTATCTTTT+GGG | + | chr3.1:65057554-65057573 | MS.gene79918:CDS | 25.0% |
| !! | TTTTAGGCTTACTTAAGTAT+AGG | + | chr3.1:65059205-65059224 | MS.gene79918:intron | 25.0% |
| !!! | AGCATCAATTTTATTTGATC+AGG | + | chr3.1:65061495-65061514 | MS.gene79918:intron | 25.0% |
| !!! | TCTAAAGTTTATGTTTTTCG+CGG | + | chr3.1:65057616-65057635 | MS.gene79918:CDS | 25.0% |
| !!! | TGATGGTTTTGATGAAATTT+GGG | + | chr3.1:65061335-65061354 | MS.gene79918:intron | 25.0% |
| !!! | TTAGTGTGGTTATTTTTCAT+GGG | + | chr3.1:65061941-65061960 | MS.gene79918:CDS | 25.0% |
| !!! | TTGATGGTTTTGATGAAATT+TGG | + | chr3.1:65061334-65061353 | MS.gene79918:intron | 25.0% |
| !!! | TTTAGTGTGGTTATTTTTCA+TGG | + | chr3.1:65061940-65061959 | MS.gene79918:CDS | 25.0% |
| AAGGAATGTTATGGATAACA+TGG | - | chr3.1:65059175-65059194 | None:intergenic | 30.0% | |
| AATAAAATTGATGCTCGGTA+AGG | - | chr3.1:65061490-65061509 | None:intergenic | 30.0% | |
| AGAGAATAAACATGTCATTC+AGG | - | chr3.1:65060983-65061002 | None:intergenic | 30.0% | |
| AGGAAGAAAACAACAATAAC+AGG | - | chr3.1:65061685-65061704 | None:intergenic | 30.0% | |
| ATCAAAATTCAGGGAATTGT+TGG | + | chr3.1:65060209-65060228 | MS.gene79918:CDS | 30.0% | |
| ATGAGGGATATGATATTCAA+CGG | - | chr3.1:65057407-65057426 | None:intergenic | 30.0% | |
| ATGTTGTTAAATAGCAGCTA+TGG | + | chr3.1:65059368-65059387 | MS.gene79918:intron | 30.0% | |
| ATTATAAGGTCCGTTTGTTT+AGG | - | chr3.1:65059121-65059140 | None:intergenic | 30.0% | |
| CCATAAATCAGCTAACTATT+AGG | - | chr3.1:65061718-65061737 | None:intergenic | 30.0% | |
| CCGGGAAAATATTAATAATG+CGG | + | chr3.1:65061804-65061823 | MS.gene79918:CDS | 30.0% | |
| CTAATGTGTTTATGTTTCAG+TGG | + | chr3.1:65060158-65060177 | MS.gene79918:intron | 30.0% | |
| CTCAAAGGAAATCAAAATTC+AGG | + | chr3.1:65060199-65060218 | MS.gene79918:CDS | 30.0% | |
| CTTTGAGCAATTTATCTCAA+GGG | - | chr3.1:65060186-65060205 | None:intergenic | 30.0% | |
| GAGAACAAAAGATAGTAAGA+CGG | - | chr3.1:65061192-65061211 | None:intergenic | 30.0% | |
| GCATTATTATATGTTGCTGA+CGG | - | chr3.1:65062545-65062564 | None:intergenic | 30.0% | |
| GCTCATGGTATGAATAATTT+GGG | - | chr3.1:65062370-65062389 | None:intergenic | 30.0% | |
| GTAACAGCAATTTCTTTAGT+AGG | - | chr3.1:65062039-65062058 | None:intergenic | 30.0% | |
| GTCTCTGATAAACAATATGT+AGG | - | chr3.1:65060130-65060149 | None:intergenic | 30.0% | |
| GTTATCCATAACATTCCTTA+CGG | + | chr3.1:65059176-65059195 | MS.gene79918:intron | 30.0% | |
| GTTTCATTGATGTCTTTAAC+AGG | + | chr3.1:65062493-65062512 | MS.gene79918:intron | 30.0% | |
| TCAACAAATATATACTTCCC+AGG | - | chr3.1:65061257-65061276 | None:intergenic | 30.0% | |
| TCTTGAATTAGAGATTGTGT+TGG | + | chr3.1:65060301-65060320 | MS.gene79918:intron | 30.0% | |
| TGACTCAAGGATTAACAAAA+GGG | - | chr3.1:65062444-65062463 | None:intergenic | 30.0% | |
| TGCTCATGGTATGAATAATT+TGG | - | chr3.1:65062371-65062390 | None:intergenic | 30.0% | |
| TGTCTTTCCACTATTTCATT+GGG | + | chr3.1:65060614-65060633 | MS.gene79918:intron | 30.0% | |
| TTATCCATAACATTCCTTAC+GGG | + | chr3.1:65059177-65059196 | MS.gene79918:intron | 30.0% | |
| TTCAATGATGTTGTCAATCT+CGG | - | chr3.1:65059539-65059558 | None:intergenic | 30.0% | |
| TTCACTGCTTTCTTAAAGTA+AGG | - | chr3.1:65058584-65058603 | None:intergenic | 30.0% | |
| TTGACTCAAGGATTAACAAA+AGG | - | chr3.1:65062445-65062464 | None:intergenic | 30.0% | |
| TTGAGCATTAATAATGGTCA+TGG | + | chr3.1:65060639-65060658 | MS.gene79918:intron | 30.0% | |
| TTGTTCCAAAATCTGATCTT+TGG | - | chr3.1:65057656-65057675 | None:intergenic | 30.0% | |
| TTGTTGAAATGAATGCTAGT+GGG | + | chr3.1:65061270-65061289 | MS.gene79918:intron | 30.0% | |
| TTTCTCTTGTTAGTTGGATA+TGG | + | chr3.1:65058719-65058738 | MS.gene79918:intron | 30.0% | |
| TTTGTTGAAATGAATGCTAG+TGG | + | chr3.1:65061269-65061288 | MS.gene79918:intron | 30.0% | |
| ! | CCGCATTATTAATATTTTCC+CGG | - | chr3.1:65061807-65061826 | None:intergenic | 30.0% |
| ! | CCTAATAGTTAGCTGATTTA+TGG | + | chr3.1:65061715-65061734 | MS.gene79918:intron | 30.0% |
| ! | CTTGTTGGGTTTTTATCTTT+TGG | + | chr3.1:65057553-65057572 | MS.gene79918:CDS | 30.0% |
| ! | GATTTCCAAAGATCAGATTT+TGG | + | chr3.1:65057648-65057667 | MS.gene79918:CDS | 30.0% |
| ! | GTTGGGCAAATTTTGTAAAT+AGG | + | chr3.1:65060568-65060587 | MS.gene79918:intron | 30.0% |
| ! | TAGATATGCTTCTCTGAAAA+TGG | + | chr3.1:65061146-65061165 | MS.gene79918:CDS | 30.0% |
| ! | TTTTCAGAAAAACAGAAGCA+TGG | - | chr3.1:65058910-65058929 | None:intergenic | 30.0% |
| ! | TTTTCATATAGCTGCTATAG+TGG | + | chr3.1:65059467-65059486 | MS.gene79918:intron | 30.0% |
| !! | AAAGCAGTGAAGTTTTATGA+GGG | + | chr3.1:65058593-65058612 | MS.gene79918:CDS | 30.0% |
| !! | AAAGTGTTGTGTGGTAAAAT+TGG | + | chr3.1:65058373-65058392 | MS.gene79918:intron | 30.0% |
| !! | GTGAATAGCTTTGATATTGA+TGG | + | chr3.1:65061318-65061337 | MS.gene79918:intron | 30.0% |
| !! | TCATAGAAGTGTGTTTTTCT+TGG | + | chr3.1:65058333-65058352 | MS.gene79918:intron | 30.0% |
| !! | TCTGTCCATTTTGTTATCAA+CGG | + | chr3.1:65057308-65057327 | MS.gene79918:CDS | 30.0% |
| !!! | AGATCAGATTTTGGAACAAT+TGG | + | chr3.1:65057657-65057676 | MS.gene79918:CDS | 30.0% |
| !!! | GATCAGATTTTGGAACAATT+GGG | + | chr3.1:65057658-65057677 | MS.gene79918:CDS | 30.0% |
| !!! | GCTAGATTCATATTTTAGTG+TGG | + | chr3.1:65061927-65061946 | MS.gene79918:CDS | 30.0% |
| !!! | GTTTCTTTCTGTTAGTTTTG+TGG | + | chr3.1:65062122-65062141 | MS.gene79918:intron | 30.0% |
| !!! | TATGCCTTGGATTTTGTTTT+CGG | + | chr3.1:65058133-65058152 | MS.gene79918:intron | 30.0% |
| AAGCAGAAAGAGAAAAACAG+GGG | - | chr3.1:65057452-65057471 | None:intergenic | 35.0% | |
| AATGACCAAAACTTTCAGAC+AGG | - | chr3.1:65059769-65059788 | None:intergenic | 35.0% | |
| AATTTGTGAGCAGAATTCTC+AGG | - | chr3.1:65062061-65062080 | None:intergenic | 35.0% | |
| ACAACAATATGGAAGATGTG+TGG | + | chr3.1:65060432-65060451 | MS.gene79918:CDS | 35.0% | |
| ACCGATCTCTAATTATTGCT+TGG | - | chr3.1:65062286-65062305 | None:intergenic | 35.0% | |
| ACTCAAGGATTAACAAAAGG+GGG | - | chr3.1:65062442-65062461 | None:intergenic | 35.0% | |
| ACTTTCGCATGTTGTTAAAC+CGG | + | chr3.1:65061785-65061804 | MS.gene79918:CDS | 35.0% | |
| AGCTATGTCATGCAGAATTT+CGG | + | chr3.1:65060900-65060919 | MS.gene79918:intron | 35.0% | |
| AGGAAACATTTGATTGCACA+CGG | + | chr3.1:65061515-65061534 | MS.gene79918:intron | 35.0% | |
| AGTTCCTTACAAGGTTATGT+TGG | + | chr3.1:65060550-65060569 | MS.gene79918:intron | 35.0% | |
| ATAAGAAATAACAACAGGCG+AGG | - | chr3.1:65059936-65059955 | None:intergenic | 35.0% | |
| ATACTCATCAGTATTGCTCA+TGG | - | chr3.1:65062385-65062404 | None:intergenic | 35.0% | |
| ATATAATAATGCGCACGAGA+TGG | + | chr3.1:65062553-65062572 | MS.gene79918:CDS | 35.0% | |
| ATGAATCTAGCAACAGAATC+CGG | - | chr3.1:65061918-65061937 | None:intergenic | 35.0% | |
| CAACAAAAATCGTGAAACAC+CGG | - | chr3.1:65057767-65057786 | None:intergenic | 35.0% | |
| CAAGCAGAAAGAGAAAAACA+GGG | - | chr3.1:65057453-65057472 | None:intergenic | 35.0% | |
| CCCAAGCAATAATTAGAGAT+CGG | + | chr3.1:65062282-65062301 | MS.gene79918:CDS | 35.0% | |
| CCGATCTCTAATTATTGCTT+GGG | - | chr3.1:65062285-65062304 | None:intergenic | 35.0% | |
| CCTTGAGATAAATTGCTCAA+AGG | + | chr3.1:65060184-65060203 | MS.gene79918:CDS | 35.0% | |
| CCTTTGAGCAATTTATCTCA+AGG | - | chr3.1:65060187-65060206 | None:intergenic | 35.0% | |
| GAATAAATGGAAGGGAACTT+TGG | + | chr3.1:65058395-65058414 | MS.gene79918:intron | 35.0% | |
| GACAACAGTAACTAGAAGAT+GGG | + | chr3.1:65060709-65060728 | MS.gene79918:CDS | 35.0% | |
| GACTCAAGGATTAACAAAAG+GGG | - | chr3.1:65062443-65062462 | None:intergenic | 35.0% | |
| GATGCTCAAAGAAAACTTGA+AGG | - | chr3.1:65062616-65062635 | None:intergenic | 35.0% | |
| GTAAGAAACAATACTGACCT+GGG | - | chr3.1:65062348-65062367 | None:intergenic | 35.0% | |
| GTGTCTTTCCACTATTTCAT+TGG | + | chr3.1:65060613-65060632 | MS.gene79918:intron | 35.0% | |
| GTTCCTTACAAGGTTATGTT+GGG | + | chr3.1:65060551-65060570 | MS.gene79918:intron | 35.0% | |
| TAACAAAAGGGGGGAAAATA+CGG | - | chr3.1:65062432-65062451 | None:intergenic | 35.0% | |
| TCAAGCAGAAAGAGAAAAAC+AGG | - | chr3.1:65057454-65057473 | None:intergenic | 35.0% | |
| TCGAAGTTTCATAGTCATGT+TGG | + | chr3.1:65058248-65058267 | MS.gene79918:intron | 35.0% | |
| TCGCAGATTGAACATAAACT+GGG | - | chr3.1:65061641-65061660 | None:intergenic | 35.0% | |
| TGGGTCTTGAGCATTAATAA+TGG | + | chr3.1:65060633-65060652 | MS.gene79918:intron | 35.0% | |
| TGTTGAAATGAATGCTAGTG+GGG | + | chr3.1:65061271-65061290 | MS.gene79918:intron | 35.0% | |
| TTCACCGAAAACAAAATCCA+AGG | - | chr3.1:65058140-65058159 | None:intergenic | 35.0% | |
| TTGTTAAATAGCAGCTATGG+CGG | + | chr3.1:65059371-65059390 | MS.gene79918:intron | 35.0% | |
| TTTACTCACATACTGCAGAA+AGG | + | chr3.1:65060372-65060391 | MS.gene79918:intron | 35.0% | |
| TTTCCAAACTCCACATTAGA+AGG | + | chr3.1:65058845-65058864 | MS.gene79918:intron | 35.0% | |
| TTTGGAAAAATTGAGCTGCA+TGG | - | chr3.1:65058833-65058852 | None:intergenic | 35.0% | |
| ! | AAAGATCTAAAACATGACCC+TGG | - | chr3.1:65058640-65058659 | None:intergenic | 35.0% |
| ! | AATTATCTCAAATCGGCTCT+TGG | + | chr3.1:65057499-65057518 | MS.gene79918:CDS | 35.0% |
| ! | CTGATCTTTGGAAATCTCTT+TGG | - | chr3.1:65057644-65057663 | None:intergenic | 35.0% |
| ! | GAAGTGTGTTTTTCTTGGTT+TGG | + | chr3.1:65058338-65058357 | MS.gene79918:intron | 35.0% |
| ! | TAAACAGTTTTGCATGCACT+TGG | + | chr3.1:65058939-65058958 | MS.gene79918:intron | 35.0% |
| ! | TACCTGATAATGCTCTTGTT+GGG | + | chr3.1:65057539-65057558 | MS.gene79918:CDS | 35.0% |
| ! | TTACCTGATAATGCTCTTGT+TGG | + | chr3.1:65057538-65057557 | MS.gene79918:CDS | 35.0% |
| ! | TTCCTTACGGGAAAGTTTTT+AGG | + | chr3.1:65059189-65059208 | MS.gene79918:intron | 35.0% |
| ! | TTGGATGAACCGTTGTTATT+CGG | + | chr3.1:65059421-65059440 | MS.gene79918:intron | 35.0% |
| ! | TTTTCTTTGAGCATCTGCAA+AGG | + | chr3.1:65062621-65062640 | MS.gene79918:CDS | 35.0% |
| ! | TTTTGGTCATTCAGTCTTCA+AGG | + | chr3.1:65059778-65059797 | MS.gene79918:CDS | 35.0% |
| !! | AAGATGATGGATCATCTTTG+CGG | - | chr3.1:65061588-65061607 | None:intergenic | 35.0% |
| !! | AGAATTATAGCTTTGGTTGG+AGG | + | chr3.1:65058023-65058042 | MS.gene79918:CDS | 35.0% |
| !! | CTCTTTTAAGCGTGTTTTTG+AGG | + | chr3.1:65059802-65059821 | MS.gene79918:CDS | 35.0% |
| !! | GAAAGCAGTGAAGTTTTATG+AGG | + | chr3.1:65058592-65058611 | MS.gene79918:CDS | 35.0% |
| !! | GAATGATTTGTTAGGCGTAT+TGG | + | chr3.1:65058223-65058242 | MS.gene79918:intron | 35.0% |
| !! | GAATTATAGCTTTGGTTGGA+GGG | + | chr3.1:65058024-65058043 | MS.gene79918:CDS | 35.0% |
| !! | GCTAGAATTATAGCTTTGGT+TGG | + | chr3.1:65058020-65058039 | MS.gene79918:CDS | 35.0% |
| !! | TGAAAGTTCAAAGTGTTGTG+TGG | + | chr3.1:65058364-65058383 | MS.gene79918:intron | 35.0% |
| !! | TGGTTCCGTTGATAACAAAA+TGG | - | chr3.1:65057316-65057335 | None:intergenic | 35.0% |
| !! | TTAAGCGTGTTTTTGAGGAT+GGG | + | chr3.1:65059807-65059826 | MS.gene79918:CDS | 35.0% |
| !! | TTATGGTTGTTTCTATGCCT+TGG | + | chr3.1:65058120-65058139 | MS.gene79918:intron | 35.0% |
| !! | TTTAAGCGTGTTTTTGAGGA+TGG | + | chr3.1:65059806-65059825 | MS.gene79918:CDS | 35.0% |
| !!! | ATGATGCTTCTTTTTTCCCA+AGG | + | chr3.1:65060036-65060055 | MS.gene79918:intron | 35.0% |
| !!! | ATTGTTTTTTCAGCTGTTGG+AGG | + | chr3.1:65057884-65057903 | MS.gene79918:intron | 35.0% |
| !!! | CTTTCTGTTAGTTTTGTGGA+CGG | + | chr3.1:65062126-65062145 | MS.gene79918:intron | 35.0% |
| !!! | CTTTGTTTTGTGCTGATTCA+TGG | + | chr3.1:65059674-65059693 | MS.gene79918:intron | 35.0% |
| !!! | GTGATTGTTTTTTCAGCTGT+TGG | + | chr3.1:65057881-65057900 | MS.gene79918:intron | 35.0% |
| !!! | GTTTTTATCTTTTGGGACTC+AGG | + | chr3.1:65057561-65057580 | MS.gene79918:CDS | 35.0% |
| !!! | TCCAGTCTTTTTTATGTCTG+TGG | + | chr3.1:65060760-65060779 | MS.gene79918:intron | 35.0% |
| AAACATTTGATTGCACACGG+TGG | + | chr3.1:65061518-65061537 | MS.gene79918:CDS | 40.0% | |
| AAAGTCGCAGTTGAAAGAAC+TGG | + | chr3.1:65059731-65059750 | MS.gene79918:CDS | 40.0% | |
| AAATCGTGAAACACCGGAAT+TGG | - | chr3.1:65057761-65057780 | None:intergenic | 40.0% | |
| AACTATGTTGGCATCTCACT+TGG | - | chr3.1:65059998-65060017 | None:intergenic | 40.0% | |
| AACTATTAGGACTGCAGAAC+AGG | - | chr3.1:65061705-65061724 | None:intergenic | 40.0% | |
| AACTTTCAGACAGGACAACA+AGG | - | chr3.1:65059760-65059779 | None:intergenic | 40.0% | |
| AAGTGAGATGCCAACATAGT+TGG | + | chr3.1:65059997-65060016 | MS.gene79918:intron | 40.0% | |
| AATCCCCAAACTTAGAACAG+AGG | - | chr3.1:65061564-65061583 | None:intergenic | 40.0% | |
| AATCGTGAAACACCGGAATT+GGG | - | chr3.1:65057760-65057779 | None:intergenic | 40.0% | |
| ACGTGGTTAATACATCCATC+TGG | + | chr3.1:65059305-65059324 | MS.gene79918:intron | 40.0% | |
| AGAAACTGCTGCAGTTGTAA+TGG | + | chr3.1:65061122-65061141 | MS.gene79918:CDS | 40.0% | |
| AGAAAGAGAAAAACAGGGGA+AGG | - | chr3.1:65057448-65057467 | None:intergenic | 40.0% | |
| AGATCTTTATGAGAACGCAC+TGG | - | chr3.1:65058545-65058564 | None:intergenic | 40.0% | |
| AGCCTAAAAACTTTCCCGTA+AGG | - | chr3.1:65059194-65059213 | None:intergenic | 40.0% | |
| AGGAATTGCAGAGAGATCAA+TGG | + | chr3.1:65057904-65057923 | MS.gene79918:CDS | 40.0% | |
| AGGGATATGATATTCAACGG+TGG | - | chr3.1:65057404-65057423 | None:intergenic | 40.0% | |
| AGTGAGATGCCAACATAGTT+GGG | + | chr3.1:65059998-65060017 | MS.gene79918:intron | 40.0% | |
| AGTGATCGTTCAAATACTCC+AGG | + | chr3.1:65060501-65060520 | MS.gene79918:CDS | 40.0% | |
| ATAAACTGATATACCGTGCC+AGG | - | chr3.1:65058065-65058084 | None:intergenic | 40.0% | |
| ATAACCTTGTAAGGAACTGC+AGG | - | chr3.1:65060548-65060567 | None:intergenic | 40.0% | |
| ATAAGGAAGACTGGGGATAT+CGG | - | chr3.1:65057212-65057231 | None:intergenic | 40.0% | |
| ATGCCTTCTAATGTGGAGTT+TGG | - | chr3.1:65058851-65058870 | None:intergenic | 40.0% | |
| ATGGGATGACAATAGCTCAA+TGG | + | chr3.1:65061959-65061978 | MS.gene79918:CDS | 40.0% | |
| ATGTTGTCAATCTCGGATAG+TGG | - | chr3.1:65059532-65059551 | None:intergenic | 40.0% | |
| ATTGAGGATAGAGTTCACCA+GGG | - | chr3.1:65057378-65057397 | None:intergenic | 40.0% | |
| ATTGCTTGGGAATCATCTTG+TGG | - | chr3.1:65062272-65062291 | None:intergenic | 40.0% | |
| CAAAAACGTCGTTATGCCTT+GGG | - | chr3.1:65060055-65060074 | None:intergenic | 40.0% | |
| CAGAGAGAGAAAAGGAATAC+TGG | - | chr3.1:65062200-65062219 | None:intergenic | 40.0% | |
| CATCAGAGATATTCTGTGGA+TGG | - | chr3.1:65058467-65058486 | None:intergenic | 40.0% | |
| CGACAACAGTAACTAGAAGA+TGG | + | chr3.1:65060708-65060727 | MS.gene79918:CDS | 40.0% | |
| CGCAGATTGAACATAAACTG+GGG | - | chr3.1:65061640-65061659 | None:intergenic | 40.0% | |
| CGTGGTTAATACATCCATCT+GGG | + | chr3.1:65059306-65059325 | MS.gene79918:intron | 40.0% | |
| CGTTGTAATGAGGTGGAAAA+TGG | - | chr3.1:65057336-65057355 | None:intergenic | 40.0% | |
| CTCAAGACCCAATGAAATAG+TGG | - | chr3.1:65060624-65060643 | None:intergenic | 40.0% | |
| CTCAAGGATTAACAAAAGGG+GGG | - | chr3.1:65062441-65062460 | None:intergenic | 40.0% | |
| CTTTCCCGTAAGGAATGTTA+TGG | - | chr3.1:65059184-65059203 | None:intergenic | 40.0% | |
| CTTTCGCATGTTGTTAAACC+GGG | + | chr3.1:65061786-65061805 | MS.gene79918:CDS | 40.0% | |
| GAATCAGAGCATGATATGTC+TGG | + | chr3.1:65060340-65060359 | MS.gene79918:intron | 40.0% | |
| GATCTTTATGAGAACGCACT+GGG | - | chr3.1:65058544-65058563 | None:intergenic | 40.0% | |
| GCAGATTGAACATAAACTGG+GGG | - | chr3.1:65061639-65061658 | None:intergenic | 40.0% | |
| GCCACAGACATAAAAAAGAC+TGG | - | chr3.1:65060764-65060783 | None:intergenic | 40.0% | |
| GGATTAGATGCCTTCTAATG+TGG | - | chr3.1:65058858-65058877 | None:intergenic | 40.0% | |
| GGTAAGAAACAATACTGACC+TGG | - | chr3.1:65062349-65062368 | None:intergenic | 40.0% | |
| GTCGCAGATTGAACATAAAC+TGG | - | chr3.1:65061642-65061661 | None:intergenic | 40.0% | |
| GTTAACAGCAGAGAGAGAAA+AGG | - | chr3.1:65062208-65062227 | None:intergenic | 40.0% | |
| TATTCAACGGTGGTGTATTG+AGG | - | chr3.1:65057394-65057413 | None:intergenic | 40.0% | |
| TATTGAGGATAGAGTTCACC+AGG | - | chr3.1:65057379-65057398 | None:intergenic | 40.0% | |
| TATTTACTCAAGCAGCTCCT+GGG | + | chr3.1:65061237-65061256 | MS.gene79918:intron | 40.0% | |
| TCAGAAATCGCGTTGTAATG+AGG | - | chr3.1:65057346-65057365 | None:intergenic | 40.0% | |
| TCGACATCAGAGATATTCTG+TGG | - | chr3.1:65058471-65058490 | None:intergenic | 40.0% | |
| TGATCACACACTACCAATCT+AGG | - | chr3.1:65062317-65062336 | None:intergenic | 40.0% | |
| TGCTATAGCGTAGCAGAATT+TGG | + | chr3.1:65059402-65059421 | MS.gene79918:intron | 40.0% | |
| TGGGGCTAGAATTATAGCTT+TGG | + | chr3.1:65058016-65058035 | MS.gene79918:CDS | 40.0% | |
| TGGGGGAAAAGAGAAAATGA+TGG | - | chr3.1:65061622-65061641 | None:intergenic | 40.0% | |
| TGTTGTCAATCTCGGATAGT+GGG | - | chr3.1:65059531-65059550 | None:intergenic | 40.0% | |
| TTACAACTGCAGCAGTTTCT+TGG | - | chr3.1:65061122-65061141 | None:intergenic | 40.0% | |
| TTATTTACTCAAGCAGCTCC+TGG | + | chr3.1:65061236-65061255 | MS.gene79918:intron | 40.0% | |
| TTGATTTCACCGCTAAGATC+TGG | + | chr3.1:65057284-65057303 | MS.gene79918:CDS | 40.0% | |
| TTGCCCAACATAACCTTGTA+AGG | - | chr3.1:65060557-65060576 | None:intergenic | 40.0% | |
| TTGCGAATACACTCTCAATG+CGG | + | chr3.1:65057798-65057817 | MS.gene79918:intron | 40.0% | |
| ! | ATTCGCCTCTGTTCTAAGTT+TGG | + | chr3.1:65061556-65061575 | MS.gene79918:CDS | 40.0% |
| ! | CAGGTTCAGGTTCATGAATT+GGG | + | chr3.1:65057580-65057599 | MS.gene79918:CDS | 40.0% |
| ! | GAAGCACTAATTGACCATCT+GGG | - | chr3.1:65060685-65060704 | None:intergenic | 40.0% |
| ! | GTTATTCAGGAATTGGCTCA+AGG | + | chr3.1:65061090-65061109 | MS.gene79918:intron | 40.0% |
| ! | GTTGTCCTGTCTGAAAGTTT+TGG | + | chr3.1:65059761-65059780 | MS.gene79918:CDS | 40.0% |
| ! | TACCTTTGTTTCTCCCTAAC+CGG | + | chr3.1:65059244-65059263 | MS.gene79918:intron | 40.0% |
| ! | TCAGGTTCAGGTTCATGAAT+TGG | + | chr3.1:65057579-65057598 | MS.gene79918:CDS | 40.0% |
| ! | TTCGCCTCTGTTCTAAGTTT+GGG | + | chr3.1:65061557-65061576 | MS.gene79918:CDS | 40.0% |
| ! | TTCTCTGAAAATGGAGACAG+AGG | + | chr3.1:65061155-65061174 | MS.gene79918:CDS | 40.0% |
| ! | TTTTGCATCAGCACTTGATC+AGG | + | chr3.1:65058658-65058677 | MS.gene79918:CDS | 40.0% |
| !! | AACCCAACAAGAGCATTATC+AGG | - | chr3.1:65057544-65057563 | None:intergenic | 40.0% |
| !! | ATGGTCTTATTGCAGTTACC+AGG | + | chr3.1:65060658-65060677 | MS.gene79918:intron | 40.0% |
| !! | ATTTCTGAAACTCATCTCCC+TGG | + | chr3.1:65057358-65057377 | MS.gene79918:CDS | 40.0% |
| !! | TAAGCGTGTTTTTGAGGATG+GGG | + | chr3.1:65059808-65059827 | MS.gene79918:CDS | 40.0% |
| !! | TACGAGCGGAATGATTTGTT+AGG | + | chr3.1:65058215-65058234 | MS.gene79918:intron | 40.0% |
| !! | TGGTCTTATTGCAGTTACCA+GGG | + | chr3.1:65060659-65060678 | MS.gene79918:intron | 40.0% |
| !! | TTGGTAGTGTGTGATCAACA+CGG | + | chr3.1:65062320-65062339 | MS.gene79918:CDS | 40.0% |
| !!! | CTTAGAGGCATTTTCGTAGT+TGG | + | chr3.1:65062156-65062175 | MS.gene79918:intron | 40.0% |
| !!! | CTTTTTTATGTCTGTGGCTG+TGG | + | chr3.1:65060766-65060785 | MS.gene79918:intron | 40.0% |
| AAACCACTCAGCAGAAATGC+TGG | - | chr3.1:65058879-65058898 | None:intergenic | 45.0% | |
| AACATAGTTGGGACGTCTCT+TGG | + | chr3.1:65060009-65060028 | MS.gene79918:intron | 45.0% | |
| AAGAGAAAAACAGGGGAAGG+AGG | - | chr3.1:65057445-65057464 | None:intergenic | 45.0% | |
| AAGAGACGTCCCAACTATGT+TGG | - | chr3.1:65060010-65060029 | None:intergenic | 45.0% | |
| AATAGCTCAATGGCGCAACT+TGG | + | chr3.1:65061969-65061988 | MS.gene79918:CDS | 45.0% | |
| AATCCAGCATTTCTGCTGAG+TGG | + | chr3.1:65058873-65058892 | MS.gene79918:intron | 45.0% | |
| ACCACCTTTAATAGGTCTCC+TGG | - | chr3.1:65057707-65057726 | None:intergenic | 45.0% | |
| ACTTAGAACAGAGGCGAATG+AGG | - | chr3.1:65061555-65061574 | None:intergenic | 45.0% | |
| AGAAATAACAACAGGCGAGG+AGG | - | chr3.1:65059933-65059952 | None:intergenic | 45.0% | |
| AGACCTATTAAAGGTGGTCC+TGG | + | chr3.1:65057709-65057728 | MS.gene79918:CDS | 45.0% | |
| AGCGGATCACCGAATAACAA+CGG | - | chr3.1:65059433-65059452 | None:intergenic | 45.0% | |
| ATAGCTCAATGGCGCAACTT+GGG | + | chr3.1:65061970-65061989 | MS.gene79918:CDS | 45.0% | |
| ATGACGGTATCAGCAACAGA+AGG | - | chr3.1:65060399-65060418 | None:intergenic | 45.0% | |
| ATTTGATTGCACACGGTGGT+TGG | + | chr3.1:65061522-65061541 | MS.gene79918:CDS | 45.0% | |
| CACACTACCAATCTAGGAAC+AGG | - | chr3.1:65062311-65062330 | None:intergenic | 45.0% | |
| CATCTGGGTGTTCGTATTGA+CGG | + | chr3.1:65059321-65059340 | MS.gene79918:intron | 45.0% | |
| CTTCTTCTAATTCTGCTGCC+AGG | + | chr3.1:65057686-65057705 | MS.gene79918:CDS | 45.0% | |
| GAAACACCGGAATTGGGAAA+AGG | - | chr3.1:65057754-65057773 | None:intergenic | 45.0% | |
| GAAATCGCGTTGTAATGAGG+TGG | - | chr3.1:65057343-65057362 | None:intergenic | 45.0% | |
| GAGAGGGGAACACAACAATA+TGG | + | chr3.1:65060421-65060440 | MS.gene79918:CDS | 45.0% | |
| GAGGATTAGGATCGGTATGA+GGG | - | chr3.1:65057423-65057442 | None:intergenic | 45.0% | |
| GAGGATTCTACTTTGCTACG+TGG | - | chr3.1:65057139-65057158 | None:intergenic | 45.0% | |
| GATCGTTCAAATACTCCAGG+TGG | + | chr3.1:65060504-65060523 | MS.gene79918:CDS | 45.0% | |
| GCAAAAACGTCGTTATGCCT+TGG | - | chr3.1:65060056-65060075 | None:intergenic | 45.0% | |
| GCAAAACAGCTGGTTAACCA+GGG | + | chr3.1:65058620-65058639 | MS.gene79918:CDS | 45.0% | |
| GTGTATTCGCAATCAGAAGC+AGG | - | chr3.1:65057790-65057809 | None:intergenic | 45.0% | |
| TAAGGAAGACTGGGGATATC+GGG | - | chr3.1:65057211-65057230 | None:intergenic | 45.0% | |
| TCGAGCTGAATCATTACGAG+CGG | + | chr3.1:65058201-65058220 | MS.gene79918:intron | 45.0% | |
| TCGGTTTCCTGTTCCTAGAT+TGG | + | chr3.1:65062301-65062320 | MS.gene79918:CDS | 45.0% | |
| TCTGTTGCTGATACCGTCAT+AGG | + | chr3.1:65060399-65060418 | MS.gene79918:CDS | 45.0% | |
| TCTTAGCGGTGAAATCAACG+CGG | - | chr3.1:65057282-65057301 | None:intergenic | 45.0% | |
| TGAAATCAACGCGGGAGTAA+GGG | - | chr3.1:65057273-65057292 | None:intergenic | 45.0% | |
| TGCAAAACAGCTGGTTAACC+AGG | + | chr3.1:65058619-65058638 | MS.gene79918:CDS | 45.0% | |
| TGCAACACTCAATGCAACTC+CGG | - | chr3.1:65057964-65057983 | None:intergenic | 45.0% | |
| TGCTCAGTGCTTGTAATCCT+GGG | + | chr3.1:65057991-65058010 | MS.gene79918:CDS | 45.0% | |
| TGGACAGATCCAGATCTTAG+CGG | - | chr3.1:65057296-65057315 | None:intergenic | 45.0% | |
| TGTACCTGCAGTTCCTTACA+AGG | + | chr3.1:65060541-65060560 | MS.gene79918:CDS | 45.0% | |
| TGTAGGGAGAACAAGAGACA+AGG | - | chr3.1:65060113-65060132 | None:intergenic | 45.0% | |
| TTGCTCAGTGCTTGTAATCC+TGG | + | chr3.1:65057990-65058009 | MS.gene79918:CDS | 45.0% | |
| TTTATGTCTGTGGCTGTGGA+TGG | + | chr3.1:65060770-65060789 | MS.gene79918:intron | 45.0% | |
| ! | CGAAAGTATGCAGTCTCATC+TGG | - | chr3.1:65061772-65061791 | None:intergenic | 45.0% |
| ! | CGAAGCACTAATTGACCATC+TGG | - | chr3.1:65060686-65060705 | None:intergenic | 45.0% |
| ! | GTGTTCGTATTGACGGCATT+GGG | + | chr3.1:65059328-65059347 | MS.gene79918:intron | 45.0% |
| ! | TCGCCTCTGTTCTAAGTTTG+GGG | + | chr3.1:65061558-65061577 | MS.gene79918:CDS | 45.0% |
| !! | AGATAGTGCTGTTAGCTCTG+AGG | + | chr3.1:65060733-65060752 | MS.gene79918:CDS | 45.0% |
| !!! | ATCTTTTGGGACTCAGGTTC+AGG | + | chr3.1:65057567-65057586 | MS.gene79918:CDS | 45.0% |
| !! | AACATATATATATATATATA+TGG | - | chr3.1:65059021-65059040 | None:intergenic | 5.0% |
| AAACGACCTGCTCGATGTAC+CGG | + | chr3.1:65057942-65057961 | MS.gene79918:CDS | 50.0% | |
| AATAACAACAGGCGAGGAGG+AGG | - | chr3.1:65059930-65059949 | None:intergenic | 50.0% | |
| ACATCCAACAATGCTGGTGC+AGG | - | chr3.1:65061877-65061896 | None:intergenic | 50.0% | |
| ACCTTCTCCATCGATGTGCA+AGG | - | chr3.1:65060236-65060255 | None:intergenic | 50.0% | |
| ACCTTGCACATCGATGGAGA+AGG | + | chr3.1:65060232-65060251 | MS.gene79918:CDS | 50.0% | |
| AGAAAAACAGGGGAAGGAGG+AGG | - | chr3.1:65057442-65057461 | None:intergenic | 50.0% | |
| AGAACGGATGAGGGAGATTG+TGG | - | chr3.1:65057185-65057204 | None:intergenic | 50.0% | |
| AGGAACTGCAGGTACAGTTG+TGG | - | chr3.1:65060537-65060556 | None:intergenic | 50.0% | |
| AGTGCTTGTAATCCTGGGAC+TGG | + | chr3.1:65057996-65058015 | MS.gene79918:CDS | 50.0% | |
| ATAACAACAGGCGAGGAGGA+GGG | - | chr3.1:65059929-65059948 | None:intergenic | 50.0% | |
| ATAATTCTAGCCCCAGTCCC+AGG | - | chr3.1:65058011-65058030 | None:intergenic | 50.0% | |
| ATCAGATACAGTGCTCGCGA+AGG | + | chr3.1:65058757-65058776 | MS.gene79918:intron | 50.0% | |
| ATCGGGATGAGAACGGATGA+GGG | - | chr3.1:65057194-65057213 | None:intergenic | 50.0% | |
| ATTGCACACGGTGGTTGGAT+AGG | + | chr3.1:65061527-65061546 | MS.gene79918:CDS | 50.0% | |
| CACAAACCTGGTGTTCTGGT+TGG | - | chr3.1:65062005-65062024 | None:intergenic | 50.0% | |
| CCTATTAAAGGTGGTCCTGG+CGG | + | chr3.1:65057712-65057731 | MS.gene79918:CDS | 50.0% | |
| CGGCTCTTGGTAGAGCAATT+GGG | + | chr3.1:65057512-65057531 | MS.gene79918:CDS | 50.0% | |
| CGTCAATACGAACACCCAGA+TGG | - | chr3.1:65059323-65059342 | None:intergenic | 50.0% | |
| CTGATACCGTCATAGGAGAG+GGG | + | chr3.1:65060406-65060425 | MS.gene79918:CDS | 50.0% | |
| CTTAGCGGTGAAATCAACGC+GGG | - | chr3.1:65057281-65057300 | None:intergenic | 50.0% | |
| CTTTGAGCATCTGCAAAGGC+TGG | + | chr3.1:65062625-65062644 | MS.gene79918:CDS | 50.0% | |
| GAAGCCACATCCAACAATGC+TGG | - | chr3.1:65061883-65061902 | None:intergenic | 50.0% | |
| GAGTGGGATAACGCATTTGG+AGG | - | chr3.1:65057158-65057177 | None:intergenic | 50.0% | |
| GCCAGACGTTCCATGTCATA+CGG | - | chr3.1:65057117-65057136 | None:intergenic | 50.0% | |
| GCCAGGAGACCTATTAAAGG+TGG | + | chr3.1:65057703-65057722 | MS.gene79918:CDS | 50.0% | |
| GCTGATACCGTCATAGGAGA+GGG | + | chr3.1:65060405-65060424 | MS.gene79918:CDS | 50.0% | |
| GCTGCCAGGAGACCTATTAA+AGG | + | chr3.1:65057700-65057719 | MS.gene79918:CDS | 50.0% | |
| GGAACTGCAGGTACAGTTGT+GGG | - | chr3.1:65060536-65060555 | None:intergenic | 50.0% | |
| GGAAGGAGGAGGATTAGGAT+CGG | - | chr3.1:65057431-65057450 | None:intergenic | 50.0% | |
| GGAGGATTAGGATCGGTATG+AGG | - | chr3.1:65057424-65057443 | None:intergenic | 50.0% | |
| GGAGTAAGGGTTGAGAATGG+AGG | - | chr3.1:65057260-65057279 | None:intergenic | 50.0% | |
| GTCGCAGTTGAAAGAACTGG+TGG | + | chr3.1:65059734-65059753 | MS.gene79918:CDS | 50.0% | |
| GTGAAATCAACGCGGGAGTA+AGG | - | chr3.1:65057274-65057293 | None:intergenic | 50.0% | |
| GTGCTTGTAATCCTGGGACT+GGG | + | chr3.1:65057997-65058016 | MS.gene79918:CDS | 50.0% | |
| TATCGGGATGAGAACGGATG+AGG | - | chr3.1:65057195-65057214 | None:intergenic | 50.0% | |
| TCAGAACCAACCAGAACACC+AGG | + | chr3.1:65061996-65062015 | MS.gene79918:CDS | 50.0% | |
| TCCGTATGACATGGAACGTC+TGG | + | chr3.1:65057113-65057132 | MS.gene79918:CDS | 50.0% | |
| TCGGCTCTTGGTAGAGCAAT+TGG | + | chr3.1:65057511-65057530 | MS.gene79918:CDS | 50.0% | |
| TGAGGGTCTTGCAAAACAGC+TGG | + | chr3.1:65058610-65058629 | MS.gene79918:CDS | 50.0% | |
| TGCACACAAACCTGGTGTTC+TGG | - | chr3.1:65062009-65062028 | None:intergenic | 50.0% | |
| TGCACCAGCATTGTTGGATG+TGG | + | chr3.1:65061876-65061895 | MS.gene79918:CDS | 50.0% | |
| TGCTGATACCGTCATAGGAG+AGG | + | chr3.1:65060404-65060423 | MS.gene79918:CDS | 50.0% | |
| TGCTTGTAATCCTGGGACTG+GGG | + | chr3.1:65057998-65058017 | MS.gene79918:CDS | 50.0% | |
| TGGGGATATCGGGATGAGAA+CGG | - | chr3.1:65057201-65057220 | None:intergenic | 50.0% | |
| TGTGTTCCCCTCTCCTATGA+CGG | - | chr3.1:65060415-65060434 | None:intergenic | 50.0% | |
| TGTTGGACCTTGCACATCGA+TGG | + | chr3.1:65060226-65060245 | MS.gene79918:CDS | 50.0% | |
| ! | AGGGGTGCATAAGGAAGACT+GGG | - | chr3.1:65057220-65057239 | None:intergenic | 50.0% |
| ! | GGTGCTCCTTTTCCCAATTC+CGG | + | chr3.1:65057745-65057764 | MS.gene79918:CDS | 50.0% |
| ! | GGTGTTCGTATTGACGGCAT+TGG | + | chr3.1:65059327-65059346 | MS.gene79918:intron | 50.0% |
| ! | GTGGACGGTGTTTTGCTTAG+AGG | + | chr3.1:65062141-65062160 | MS.gene79918:intron | 50.0% |
| ! | GTTGCATTGAGTGTTGCAGC+TGG | + | chr3.1:65057966-65057985 | MS.gene79918:CDS | 50.0% |
| ! | TAGCCAAGCATTGCCGGTTA+GGG | - | chr3.1:65059260-65059279 | None:intergenic | 50.0% |
| ! | TGCCGGTTAGGGAGAAACAA+AGG | - | chr3.1:65059249-65059268 | None:intergenic | 50.0% |
| ! | TGTTGGGTGCTGCAGATGAT+TGG | + | chr3.1:65059970-65059989 | MS.gene79918:intron | 50.0% |
| !! | TGGAGGTGCAGGTTTTGCAA+CGG | - | chr3.1:65057243-65057262 | None:intergenic | 50.0% |
| AAAGGTGGTCCTGGCGGTAT+TGG | + | chr3.1:65057718-65057737 | MS.gene79918:CDS | 55.0% | |
| AACCGGCAATGCTTGGCTAC+AGG | + | chr3.1:65059261-65059280 | MS.gene79918:intron | 55.0% | |
| ACAGATCCCGAGGGAATCGA+CGG | + | chr3.1:65057088-65057107 | MS.gene79918:CDS | 55.0% | |
| ACAGGGGAAGGAGGAGGATT+AGG | - | chr3.1:65057436-65057455 | None:intergenic | 55.0% | |
| ACGGATGAGGGAGATTGTGG+CGG | - | chr3.1:65057182-65057201 | None:intergenic | 55.0% | |
| ACTGCCTGCACCAGCATTGT+TGG | + | chr3.1:65061870-65061889 | MS.gene79918:CDS | 55.0% | |
| ATGCACTGAAGGACCTGGCA+CGG | + | chr3.1:65058049-65058068 | MS.gene79918:CDS | 55.0% | |
| ATGGCGAACACAGATCCCGA+GGG | + | chr3.1:65057079-65057098 | MS.gene79918:CDS | 55.0% | |
| CAGAATCCGGTCTGCAGCAA+TGG | - | chr3.1:65061905-65061924 | None:intergenic | 55.0% | |
| CCGCCAGGACCACCTTTAAT+AGG | - | chr3.1:65057715-65057734 | None:intergenic | 55.0% | |
| CTAATTGACCATCTGGGCCC+TGG | - | chr3.1:65060679-65060698 | None:intergenic | 55.0% | |
| GAGGATGGGGAGCAATCTCT+TGG | + | chr3.1:65059821-65059840 | MS.gene79918:CDS | 55.0% | |
| GATCAATGGCCTGTTCCACC+TGG | + | chr3.1:65057918-65057937 | MS.gene79918:CDS | 55.0% | |
| GCGACGCTCACAGTTTGTAC+AGG | + | chr3.1:65061657-65061676 | MS.gene79918:CDS | 55.0% | |
| GCGGGAGTAAGGGTTGAGAA+TGG | - | chr3.1:65057263-65057282 | None:intergenic | 55.0% | |
| GGCATGACTGCACACAAACC+TGG | - | chr3.1:65062017-65062036 | None:intergenic | 55.0% | |
| GGCGAGTGGGATAACGCATT+TGG | - | chr3.1:65057161-65057180 | None:intergenic | 55.0% | |
| GGGGTGCATAAGGAAGACTG+GGG | - | chr3.1:65057219-65057238 | None:intergenic | 55.0% | |
| GTGTGATCAACACGGTTCCC+AGG | + | chr3.1:65062328-65062347 | MS.gene79918:CDS | 55.0% | |
| TCGACGGAGTCCGTATGACA+TGG | + | chr3.1:65057104-65057123 | MS.gene79918:CDS | 55.0% | |
| TCTCCCTAACCGGCAATGCT+TGG | + | chr3.1:65059254-65059273 | MS.gene79918:intron | 55.0% | |
| TGGCTTCCATTGCTGCAGAC+CGG | + | chr3.1:65061896-65061915 | MS.gene79918:CDS | 55.0% | |
| ! | AGGGTTGAGAATGGAGGTGC+AGG | - | chr3.1:65057254-65057273 | None:intergenic | 55.0% |
| ! | AGGTGCAGGTTTTGCAACGG+AGG | - | chr3.1:65057240-65057259 | None:intergenic | 55.0% |
| ! | AGTTGTGGGTTGACACCACC+TGG | - | chr3.1:65060522-65060541 | None:intergenic | 55.0% |
| ! | GAGGGGTGCATAAGGAAGAC+TGG | - | chr3.1:65057221-65057240 | None:intergenic | 55.0% |
| ! | GGTGCAGGTTTTGCAACGGA+GGG | - | chr3.1:65057239-65057258 | None:intergenic | 55.0% |
| ! | GTAGCCAAGCATTGCCGGTT+AGG | - | chr3.1:65059261-65059280 | None:intergenic | 55.0% |
| ! | GTCCTGTAGCCAAGCATTGC+CGG | - | chr3.1:65059266-65059285 | None:intergenic | 55.0% |
| ! | GTGCAGGTTTTGCAACGGAG+GGG | - | chr3.1:65057238-65057257 | None:intergenic | 55.0% |
| ! | TTGCAACGGAGGGGTGCATA+AGG | - | chr3.1:65057229-65057248 | None:intergenic | 55.0% |
| AATGCGCACGAGATGGCTGC+TGG | + | chr3.1:65062560-65062579 | MS.gene79918:CDS | 60.0% | |
| CATCGAGCAGGTCGTTTGCC+AGG | - | chr3.1:65057939-65057958 | None:intergenic | 60.0% | |
| GATGGCGAACACAGATCCCG+AGG | + | chr3.1:65057078-65057097 | MS.gene79918:CDS | 60.0% | |
| GCAACTCCGGTACATCGAGC+AGG | - | chr3.1:65057951-65057970 | None:intergenic | 60.0% | |
| GGTCGTTTGCCAGGTGGAAC+AGG | - | chr3.1:65057930-65057949 | None:intergenic | 60.0% | |
| GTGCCAGGTCCTTCAGTGCA+TGG | - | chr3.1:65058050-65058069 | None:intergenic | 60.0% | |
| GTTGGAGGGCCATGCACTGA+AGG | + | chr3.1:65058038-65058057 | MS.gene79918:CDS | 60.0% | |
| TGCAGTTACCAGGGCCCAGA+TGG | + | chr3.1:65060668-65060687 | MS.gene79918:intron | 60.0% | |
| !! | ACGGACTCCGTCGATTCCCT+CGG | - | chr3.1:65057098-65057117 | None:intergenic | 60.0% |
| AGGGAGATTGTGGCGGCGAG+TGG | - | chr3.1:65057175-65057194 | None:intergenic | 65.0% | |
| CGAGCAGGTCGTTTGCCAGG+TGG | - | chr3.1:65057936-65057955 | None:intergenic | 65.0% | |
| GCACCACCACCAATACCGCC+AGG | - | chr3.1:65057730-65057749 | None:intergenic | 65.0% | |
| GGGAGATTGTGGCGGCGAGT+GGG | - | chr3.1:65057174-65057193 | None:intergenic | 65.0% | |
| GGGCCATGCACTGAAGGACC+TGG | + | chr3.1:65058044-65058063 | MS.gene79918:CDS | 65.0% | |
| ! | GGTGGTCCTGGCGGTATTGG+TGG | + | chr3.1:65057721-65057740 | MS.gene79918:CDS | 65.0% |
| !! | CGGACTCCGTCGATTCCCTC+GGG | - | chr3.1:65057097-65057116 | None:intergenic | 65.0% |
| !! | GGTCCTGGCGGTATTGGTGG+TGG | + | chr3.1:65057724-65057743 | MS.gene79918:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 65057070 | 65062661 | 65057070 | ID=MS.gene79918 |
| chr3.1 | mRNA | 65057070 | 65062661 | 65057070 | ID=MS.gene79918.t1;Parent=MS.gene79918 |
| chr3.1 | exon | 65057070 | 65057768 | 65057070 | ID=MS.gene79918.t1.exon1;Parent=MS.gene79918.t1 |
| chr3.1 | CDS | 65057070 | 65057768 | 65057070 | ID=cds.MS.gene79918.t1;Parent=MS.gene79918.t1 |
| chr3.1 | exon | 65057897 | 65058070 | 65057897 | ID=MS.gene79918.t1.exon2;Parent=MS.gene79918.t1 |
| chr3.1 | CDS | 65057897 | 65058070 | 65057897 | ID=cds.MS.gene79918.t1;Parent=MS.gene79918.t1 |
| chr3.1 | exon | 65058518 | 65058679 | 65058518 | ID=MS.gene79918.t1.exon3;Parent=MS.gene79918.t1 |
| chr3.1 | CDS | 65058518 | 65058679 | 65058518 | ID=cds.MS.gene79918.t1;Parent=MS.gene79918.t1 |
| chr3.1 | exon | 65059713 | 65059855 | 65059713 | ID=MS.gene79918.t1.exon4;Parent=MS.gene79918.t1 |
| chr3.1 | CDS | 65059713 | 65059855 | 65059713 | ID=cds.MS.gene79918.t1;Parent=MS.gene79918.t1 |
| chr3.1 | exon | 65060178 | 65060253 | 65060178 | ID=MS.gene79918.t1.exon5;Parent=MS.gene79918.t1 |
| chr3.1 | CDS | 65060178 | 65060253 | 65060178 | ID=cds.MS.gene79918.t1;Parent=MS.gene79918.t1 |
| chr3.1 | exon | 65060390 | 65060562 | 65060390 | ID=MS.gene79918.t1.exon6;Parent=MS.gene79918.t1 |
| chr3.1 | CDS | 65060390 | 65060562 | 65060390 | ID=cds.MS.gene79918.t1;Parent=MS.gene79918.t1 |
| chr3.1 | exon | 65060673 | 65060754 | 65060673 | ID=MS.gene79918.t1.exon7;Parent=MS.gene79918.t1 |
| chr3.1 | CDS | 65060673 | 65060754 | 65060673 | ID=cds.MS.gene79918.t1;Parent=MS.gene79918.t1 |
| chr3.1 | exon | 65061099 | 65061176 | 65061099 | ID=MS.gene79918.t1.exon8;Parent=MS.gene79918.t1 |
| chr3.1 | CDS | 65061099 | 65061176 | 65061099 | ID=cds.MS.gene79918.t1;Parent=MS.gene79918.t1 |
| chr3.1 | exon | 65061517 | 65061678 | 65061517 | ID=MS.gene79918.t1.exon9;Parent=MS.gene79918.t1 |
| chr3.1 | CDS | 65061517 | 65061678 | 65061517 | ID=cds.MS.gene79918.t1;Parent=MS.gene79918.t1 |
| chr3.1 | exon | 65061754 | 65062017 | 65061754 | ID=MS.gene79918.t1.exon10;Parent=MS.gene79918.t1 |
| chr3.1 | CDS | 65061754 | 65062017 | 65061754 | ID=cds.MS.gene79918.t1;Parent=MS.gene79918.t1 |
| chr3.1 | exon | 65062245 | 65062349 | 65062245 | ID=MS.gene79918.t1.exon11;Parent=MS.gene79918.t1 |
| chr3.1 | CDS | 65062245 | 65062349 | 65062245 | ID=cds.MS.gene79918.t1;Parent=MS.gene79918.t1 |
| chr3.1 | exon | 65062515 | 65062661 | 65062515 | ID=MS.gene79918.t1.exon12;Parent=MS.gene79918.t1 |
| chr3.1 | CDS | 65062515 | 65062661 | 65062515 | ID=cds.MS.gene79918.t1;Parent=MS.gene79918.t1 |
| Gene Sequence |
| Protein sequence |
