Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene001931.t1 | XP_003622131.1 | 99.5 | 431 | 2 | 0 | 1 | 431 | 12 | 442 | 1.10E-244 | 855.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene001931.t1 | Q9SGA0 | 68.6 | 427 | 120 | 6 | 1 | 419 | 13 | 433 | 6.0e-156 | 552.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene001931.t1 | G7L275 | 99.5 | 431 | 2 | 0 | 1 | 431 | 12 | 442 | 7.6e-245 | 855.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene001931 | MS.gene029645 | PPI |
| MS.gene054781 | MS.gene001931 | PPI |
| MS.gene90601 | MS.gene001931 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene001931.t1 | MTR_7g028050 | 99.536 | 431 | 2 | 0 | 1 | 431 | 12 | 442 | 0.0 | 887 |
| MS.gene001931.t1 | MTR_7g028050 | 99.410 | 339 | 2 | 0 | 93 | 431 | 1 | 339 | 0.0 | 697 |
| MS.gene001931.t1 | MTR_5g047260 | 59.397 | 431 | 168 | 4 | 1 | 431 | 28 | 451 | 0.0 | 523 |
| MS.gene001931.t1 | MTR_7g022470 | 56.064 | 437 | 180 | 5 | 1 | 431 | 21 | 451 | 1.34e-166 | 476 |
| MS.gene001931.t1 | MTR_5g011580 | 49.886 | 439 | 198 | 5 | 1 | 431 | 17 | 441 | 2.07e-145 | 421 |
| MS.gene001931.t1 | MTR_4g101950 | 49.431 | 439 | 200 | 5 | 1 | 431 | 17 | 441 | 1.96e-143 | 416 |
| MS.gene001931.t1 | MTR_5g047260 | 58.702 | 339 | 134 | 4 | 1 | 339 | 28 | 360 | 1.02e-140 | 407 |
| MS.gene001931.t1 | MTR_3g088885 | 49.306 | 432 | 206 | 7 | 1 | 424 | 20 | 446 | 1.87e-138 | 404 |
| MS.gene001931.t1 | MTR_1g029520 | 48.485 | 429 | 210 | 6 | 6 | 424 | 254 | 681 | 1.42e-132 | 397 |
| MS.gene001931.t1 | MTR_5g047260 | 59.233 | 287 | 112 | 3 | 1 | 287 | 28 | 309 | 1.17e-118 | 348 |
| MS.gene001931.t1 | MTR_5g015170 | 43.237 | 414 | 205 | 6 | 1 | 389 | 20 | 428 | 1.50e-114 | 344 |
| MS.gene001931.t1 | MTR_4g097380 | 40.842 | 404 | 225 | 3 | 1 | 390 | 39 | 442 | 4.18e-104 | 318 |
| MS.gene001931.t1 | MTR_1g012740 | 37.903 | 124 | 70 | 2 | 231 | 353 | 30 | 147 | 4.36e-21 | 90.1 |
| MS.gene001931.t1 | MTR_1g012740 | 41.176 | 102 | 53 | 3 | 5 | 101 | 29 | 128 | 1.11e-11 | 63.5 |
| MS.gene001931.t1 | MTR_1g112170 | 27.363 | 201 | 113 | 6 | 4 | 178 | 74 | 267 | 3.40e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene001931.t1 | AT3G01990 | 67.916 | 427 | 123 | 6 | 1 | 419 | 27 | 447 | 0.0 | 572 |
| MS.gene001931.t1 | AT3G01990 | 67.916 | 427 | 123 | 6 | 1 | 419 | 27 | 447 | 0.0 | 572 |
| MS.gene001931.t1 | AT3G01990 | 67.916 | 427 | 123 | 6 | 1 | 419 | 13 | 433 | 0.0 | 570 |
| MS.gene001931.t1 | AT3G01990 | 67.916 | 427 | 123 | 6 | 1 | 419 | 13 | 433 | 0.0 | 570 |
| MS.gene001931.t1 | AT3G01990 | 72.351 | 387 | 100 | 4 | 1 | 386 | 27 | 407 | 0.0 | 563 |
| MS.gene001931.t1 | AT3G01990 | 72.351 | 387 | 100 | 4 | 1 | 386 | 13 | 393 | 0.0 | 561 |
| MS.gene001931.t1 | AT1G69040 | 61.697 | 436 | 160 | 4 | 1 | 431 | 22 | 455 | 0.0 | 551 |
| MS.gene001931.t1 | AT1G69040 | 61.697 | 436 | 160 | 4 | 1 | 431 | 18 | 451 | 0.0 | 551 |
| MS.gene001931.t1 | AT2G03730 | 58.314 | 439 | 169 | 6 | 1 | 429 | 22 | 456 | 2.43e-176 | 501 |
| MS.gene001931.t1 | AT2G03730 | 58.314 | 439 | 169 | 6 | 1 | 429 | 22 | 456 | 2.43e-176 | 501 |
| MS.gene001931.t1 | AT3G01990 | 70.533 | 319 | 87 | 4 | 1 | 318 | 27 | 339 | 4.16e-159 | 452 |
| MS.gene001931.t1 | AT3G01990 | 69.444 | 324 | 92 | 4 | 1 | 323 | 27 | 344 | 4.28e-159 | 453 |
| MS.gene001931.t1 | AT3G01990 | 69.444 | 324 | 92 | 4 | 1 | 323 | 13 | 330 | 1.31e-158 | 451 |
| MS.gene001931.t1 | AT1G76990 | 51.054 | 427 | 195 | 6 | 1 | 416 | 20 | 443 | 2.56e-144 | 419 |
| MS.gene001931.t1 | AT1G76990 | 51.054 | 427 | 195 | 6 | 1 | 416 | 20 | 443 | 2.56e-144 | 419 |
| MS.gene001931.t1 | AT1G76990 | 51.054 | 427 | 195 | 6 | 1 | 416 | 20 | 443 | 2.56e-144 | 419 |
| MS.gene001931.t1 | AT1G76990 | 51.054 | 427 | 195 | 6 | 1 | 416 | 20 | 443 | 2.56e-144 | 419 |
| MS.gene001931.t1 | AT1G76990 | 51.054 | 427 | 195 | 6 | 1 | 416 | 20 | 443 | 2.56e-144 | 419 |
| MS.gene001931.t1 | AT1G12420 | 49.772 | 438 | 200 | 5 | 1 | 431 | 17 | 441 | 1.67e-139 | 406 |
| MS.gene001931.t1 | AT4G22780 | 48.884 | 448 | 195 | 7 | 1 | 430 | 17 | 448 | 3.47e-136 | 398 |
| MS.gene001931.t1 | AT4G22780 | 48.884 | 448 | 195 | 7 | 1 | 430 | 17 | 448 | 3.47e-136 | 398 |
| MS.gene001931.t1 | AT3G01990 | 68.310 | 284 | 83 | 4 | 1 | 283 | 27 | 304 | 8.25e-134 | 387 |
| MS.gene001931.t1 | AT3G01990 | 68.310 | 284 | 83 | 4 | 1 | 283 | 13 | 290 | 1.41e-133 | 386 |
| MS.gene001931.t1 | AT5G25320 | 43.678 | 435 | 193 | 5 | 3 | 394 | 24 | 449 | 2.04e-128 | 380 |
| MS.gene001931.t1 | AT5G25320 | 43.780 | 418 | 183 | 6 | 19 | 393 | 1 | 409 | 2.49e-123 | 366 |
| MS.gene001931.t1 | AT5G65890 | 42.056 | 428 | 214 | 6 | 1 | 401 | 21 | 441 | 1.05e-111 | 337 |
| MS.gene001931.t1 | AT5G65890 | 42.056 | 428 | 214 | 6 | 1 | 401 | 21 | 441 | 1.05e-111 | 337 |
| MS.gene001931.t1 | AT1G12420 | 47.906 | 382 | 179 | 5 | 57 | 431 | 1 | 369 | 4.71e-110 | 329 |
| MS.gene001931.t1 | AT5G25320 | 43.370 | 362 | 153 | 6 | 3 | 321 | 24 | 376 | 6.54e-100 | 303 |
| MS.gene001931.t1 | AT5G65890 | 40.657 | 396 | 201 | 6 | 33 | 401 | 1 | 389 | 4.11e-97 | 298 |
| MS.gene001931.t1 | AT5G65890 | 40.657 | 396 | 201 | 6 | 33 | 401 | 1 | 389 | 4.11e-97 | 298 |
| MS.gene001931.t1 | AT5G65890 | 40.575 | 313 | 169 | 4 | 104 | 401 | 17 | 327 | 1.46e-75 | 240 |
| MS.gene001931.t1 | AT5G04740 | 27.429 | 175 | 101 | 4 | 4 | 152 | 95 | 269 | 2.24e-12 | 67.8 |
Find 104 sgRNAs with CRISPR-Local
Find 293 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTGATGGAGTTTGGTTTA+TGG | 0.140421 | 7.3:+72549281 | MS.gene001931:CDS |
| TCTCTCAGCCTCTGAGCTTA+TGG | 0.248727 | 7.3:-72551380 | None:intergenic |
| TATGAACCTTGTGATTAAAA+AGG | 0.256217 | 7.3:+72549248 | MS.gene001931:CDS |
| TTTGCTCTGTAACGTGCTTC+GGG | 0.287780 | 7.3:+72550505 | MS.gene001931:CDS |
| CGTCCCGTCTCTCCACAATA+AGG | 0.298680 | 7.3:+72550480 | MS.gene001931:CDS |
| AGAAAGGACAGGGGCTTATC+AGG | 0.309556 | 7.3:+72550820 | MS.gene001931:CDS |
| TCAATAATCTTCGGATCAAC+TGG | 0.310582 | 7.3:-72552020 | None:intergenic |
| ACAACAATTGGATTTCTCTT+TGG | 0.313884 | 7.3:+72552122 | MS.gene001931:CDS |
| TGAAAACGCCACTGTTATTC+AGG | 0.320918 | 7.3:+72548934 | MS.gene001931:CDS |
| CACACTGTTATTGAACTTAC+TGG | 0.322113 | 7.3:+72550305 | MS.gene001931:CDS |
| ATATTTCCTCTGATGGAGTT+TGG | 0.326275 | 7.3:+72549274 | MS.gene001931:CDS |
| ATTTGCTCTGTAACGTGCTT+CGG | 0.330102 | 7.3:+72550504 | MS.gene001931:CDS |
| CTCTCAGCCTCTGAGCTTAT+GGG | 0.354199 | 7.3:-72551379 | None:intergenic |
| ATCAGATTATGTTTGCTGAT+AGG | 0.355750 | 7.3:+72550600 | MS.gene001931:CDS |
| ACATCCTGGAGTTACGTATA+GGG | 0.365344 | 7.3:+72550565 | MS.gene001931:CDS |
| GTTGTTCCTTGAGGTGGTTT+TGG | 0.365505 | 7.3:-72552104 | None:intergenic |
| GGACTTAGAGAAAGAGATAA+AGG | 0.373479 | 7.3:+72550647 | MS.gene001931:CDS |
| TCAGATTATGTTTGCTGATA+GGG | 0.377860 | 7.3:+72550601 | MS.gene001931:CDS |
| ACGTGGTTACCGCCGAGATT+TGG | 0.380390 | 7.3:+72550387 | MS.gene001931:CDS |
| AGATTTGGACGCATAATACT+AGG | 0.383745 | 7.3:+72550402 | MS.gene001931:CDS |
| CCACCTCAAGGAACAACAAT+TGG | 0.386888 | 7.3:+72552110 | MS.gene001931:CDS |
| CACATCCTGGAGTTACGTAT+AGG | 0.390969 | 7.3:+72550564 | MS.gene001931:CDS |
| CGTCGATGAGAGAGTCTGTT+GGG | 0.427819 | 7.3:+72550264 | MS.gene001931:CDS |
| CTCATCGACGTTTCAAAGCT+CGG | 0.431463 | 7.3:-72550251 | None:intergenic |
| GAGACGGGACGGATCCTCTA+TGG | 0.438044 | 7.3:-72550468 | None:intergenic |
| AAGGCTTATATTTCCTCTGA+TGG | 0.443541 | 7.3:+72549267 | MS.gene001931:CDS |
| AGTATTATGCGTCCAAATCT+CGG | 0.445766 | 7.3:-72550399 | None:intergenic |
| GTCCCGTCTCTCCACAATAA+GGG | 0.458534 | 7.3:+72550481 | MS.gene001931:CDS |
| CGGATTGAATCAATAATCTT+CGG | 0.460770 | 7.3:-72552029 | None:intergenic |
| GAGACAGTTACATGTGGAAA+TGG | 0.463913 | 7.3:-72550671 | None:intergenic |
| AAACAAACACGGGATACTCT+TGG | 0.470655 | 7.3:+72549203 | MS.gene001931:CDS |
| ATCCTCTATGGCACAACCAC+TGG | 0.470852 | 7.3:-72550456 | None:intergenic |
| CCAATTGTTGTTCCTTGAGG+TGG | 0.481529 | 7.3:-72552110 | None:intergenic |
| ATCCCTTATTGTGGAGAGAC+GGG | 0.482816 | 7.3:-72550483 | None:intergenic |
| TTTAATGTGACGGATCGAAA+TGG | 0.483271 | 7.3:+72549425 | MS.gene001931:CDS |
| GCAGAAATATCAACAGAAAA+CGG | 0.485454 | 7.3:+72551954 | MS.gene001931:CDS |
| GGTTCATATCTGAAATAACT+TGG | 0.492510 | 7.3:-72549233 | None:intergenic |
| TTGCTGATAGGGACTATGAA+AGG | 0.495088 | 7.3:+72550612 | MS.gene001931:CDS |
| CCGTGTCGCCGATCTGTCTA+CGG | 0.499307 | 7.3:-72552049 | None:intergenic |
| TGTCTCAGACTGTACTGAAA+GGG | 0.510423 | 7.3:+72550688 | MS.gene001931:CDS |
| AGAATAAATATTACCTAGGT+GGG | 0.511593 | 7.3:-72547946 | None:intergenic |
| GGACTATGAAAGGGTTGAAA+GGG | 0.513027 | 7.3:+72550622 | MS.gene001931:CDS |
| TGAAGCGGCAATTGAGAGGC+GGG | 0.524380 | 7.3:+72551423 | MS.gene001931:CDS |
| CGCAGACCTTCGCTGTAACG+TGG | 0.524628 | 7.3:+72550370 | MS.gene001931:CDS |
| CTTACTGGCACAGACAGGCC+TGG | 0.525209 | 7.3:+72550320 | MS.gene001931:CDS |
| GATTCAATCCGTAGACAGAT+CGG | 0.527568 | 7.3:+72552041 | MS.gene001931:CDS |
| AAAACTGCACTTTCACATCC+TGG | 0.532657 | 7.3:+72550551 | MS.gene001931:CDS |
| ACAATATCAAACAACAGCTT+CGG | 0.533003 | 7.3:-72550746 | None:intergenic |
| ATGGTGTGGTTCAGACAGAA+AGG | 0.542138 | 7.3:+72550804 | MS.gene001931:CDS |
| GGCACAACCACTGGAATCAT+CGG | 0.542861 | 7.3:-72550447 | None:intergenic |
| CAGATTTCAGATAGTAAACC+AGG | 0.548837 | 7.3:-72550338 | None:intergenic |
| TTCCAGTGGTTGTGCCATAG+AGG | 0.552241 | 7.3:+72550454 | MS.gene001931:CDS |
| TTGTATGCAGGGGATGGAGC+TGG | 0.553032 | 7.3:+72551851 | MS.gene001931:intron |
| AAGAATAAATATTACCTAGG+TGG | 0.554137 | 7.3:-72547947 | None:intergenic |
| GTGGTTCAGACAGAAAGGAC+AGG | 0.555199 | 7.3:+72550809 | MS.gene001931:CDS |
| GCTCAGAGGCTGAGAGAGAA+CGG | 0.556750 | 7.3:+72551386 | MS.gene001931:CDS |
| AATCCAATTGTTGTTCCTTG+AGG | 0.560279 | 7.3:-72552113 | None:intergenic |
| GATCGGCGACACGGTACTGC+AGG | 0.560359 | 7.3:+72552058 | MS.gene001931:CDS |
| GGGACTATGAAAGGGTTGAA+AGG | 0.560708 | 7.3:+72550621 | MS.gene001931:CDS |
| TTGAACTTACTGGCACAGAC+AGG | 0.567860 | 7.3:+72550315 | MS.gene001931:CDS |
| CTGTCTCAGACTGTACTGAA+AGG | 0.574748 | 7.3:+72550687 | MS.gene001931:CDS |
| CTATCCCTATACGTAACTCC+AGG | 0.576701 | 7.3:-72550569 | None:intergenic |
| AGTCATTGATTATATTCAGA+GGG | 0.577703 | 7.3:+72549469 | MS.gene001931:CDS |
| TATGAAAGGGTTGAAAGGGC+AGG | 0.577858 | 7.3:+72550626 | MS.gene001931:CDS |
| AGATCGTGTAGGACTCCTCT+CGG | 0.580884 | 7.3:+72551887 | MS.gene001931:CDS |
| AATTGAGAGGCGGGCATCTG+AGG | 0.581375 | 7.3:+72551432 | MS.gene001931:CDS |
| GATGGAGTTTGGTTTATGGA+TGG | 0.582629 | 7.3:+72549285 | MS.gene001931:CDS |
| CCGTAGACAGATCGGCGACA+CGG | 0.589318 | 7.3:+72552049 | MS.gene001931:CDS |
| GTCTTGAAGCGGCAATTGAG+AGG | 0.589946 | 7.3:+72551419 | MS.gene001931:CDS |
| AATCCCTTATTGTGGAGAGA+CGG | 0.591547 | 7.3:-72550484 | None:intergenic |
| ACAGAGCAAATCCCTTATTG+TGG | 0.596940 | 7.3:-72550492 | None:intergenic |
| CAATAATCTTCGGATCAACT+GGG | 0.600617 | 7.3:-72552019 | None:intergenic |
| TGCTGATAGGGACTATGAAA+GGG | 0.606933 | 7.3:+72550613 | MS.gene001931:CDS |
| AAGTCATTGATTATATTCAG+AGG | 0.614562 | 7.3:+72549468 | MS.gene001931:CDS |
| TTGAAGCGGCAATTGAGAGG+CGG | 0.615320 | 7.3:+72551422 | MS.gene001931:CDS |
| ATAACAGTGTGCTCTTCAGT+AGG | 0.619599 | 7.3:-72550293 | None:intergenic |
| CTTATTGTGGAGAGACGGGA+CGG | 0.622503 | 7.3:-72550479 | None:intergenic |
| ATCATCGGTTACATGAACTA+CGG | 0.623701 | 7.3:-72550432 | None:intergenic |
| TGGTTCAGACAGAAAGGACA+GGG | 0.627734 | 7.3:+72550810 | MS.gene001931:CDS |
| CGGTAACCACGTTACAGCGA+AGG | 0.628131 | 7.3:-72550376 | None:intergenic |
| CATAAACCAAACTCCATCAG+AGG | 0.629050 | 7.3:-72549280 | None:intergenic |
| GATTTGGACGCATAATACTA+GGG | 0.632391 | 7.3:+72550403 | MS.gene001931:CDS |
| AATATCAACAGAAAACGGAA+AGG | 0.638039 | 7.3:+72551959 | MS.gene001931:CDS |
| ACGTCGATGAGAGAGTCTGT+TGG | 0.641528 | 7.3:+72550263 | MS.gene001931:CDS |
| TAAGGAGGATGAACCCACCT+AGG | 0.644112 | 7.3:+72547933 | None:intergenic |
| AACTGGGTTACCAGTTACAT+CGG | 0.647131 | 7.3:-72552003 | None:intergenic |
| GACTCCTCTCGGATATCACA+AGG | 0.651775 | 7.3:+72551898 | MS.gene001931:CDS |
| CTTTCACCAAAACCACCTCA+AGG | 0.651932 | 7.3:+72552098 | MS.gene001931:CDS |
| GCTTATACAGTGTCTTGAAG+CGG | 0.655208 | 7.3:+72551408 | MS.gene001931:CDS |
| TTGACAGTGTAAACAAACAC+GGG | 0.657246 | 7.3:+72549193 | MS.gene001931:CDS |
| TGATACATAAACTGTTCTCG+CGG | 0.658352 | 7.3:-72551926 | None:intergenic |
| GTTGACAGTGTAAACAAACA+CGG | 0.663549 | 7.3:+72549192 | MS.gene001931:CDS |
| CATGTAACCGATGATTCCAG+TGG | 0.665641 | 7.3:+72550440 | MS.gene001931:CDS |
| TTGCTCTGTAACGTGCTTCG+GGG | 0.668610 | 7.3:+72550506 | MS.gene001931:CDS |
| CAGTCTGAGACAGTTACATG+TGG | 0.672783 | 7.3:-72550677 | None:intergenic |
| TGGCTTTCCCATAAGCTCAG+AGG | 0.681534 | 7.3:+72551372 | MS.gene001931:CDS |
| TTGTGCACAGAAGATCGTGT+AGG | 0.682342 | 7.3:+72551876 | MS.gene001931:CDS |
| GTCGATGAGAGAGTCTGTTG+GGG | 0.682439 | 7.3:+72550265 | MS.gene001931:CDS |
| TACTGAAAGGGATTATACTG+TGG | 0.689453 | 7.3:+72550700 | MS.gene001931:CDS |
| TTTACTATCTGAAATCTGTG+CGG | 0.698113 | 7.3:+72550343 | MS.gene001931:CDS |
| AAGCCATACCTGAATAACAG+TGG | 0.722877 | 7.3:-72548942 | None:intergenic |
| AAATCCTTGTGATATCCGAG+AGG | 0.755556 | 7.3:-72551902 | None:intergenic |
| GGTTCAGACAGAAAGGACAG+GGG | 0.787336 | 7.3:+72550811 | MS.gene001931:CDS |
| ATTATGCGTCCAAATCTCGG+CGG | 0.824418 | 7.3:-72550396 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATTATTATTATTATTAT+TGG | + | chr7.3:72548025-72548044 | MS.gene001931:intron | 0.0% |
| !! | AAAACAGATTAAATTATAAA+AGG | + | chr7.3:72551628-72551647 | MS.gene001931:intron | 10.0% |
| !! | AATCTTATTGAATATATAAA+AGG | - | chr7.3:72549158-72549177 | None:intergenic | 10.0% |
| !! | ATCTTATTGAATATATAAAA+GGG | - | chr7.3:72549157-72549176 | None:intergenic | 10.0% |
| !! | ATTATATAATTGATCAATAA+TGG | - | chr7.3:72549787-72549806 | None:intergenic | 10.0% |
| !!! | ACATATTTATATATTTTTGT+TGG | - | chr7.3:72548842-72548861 | None:intergenic | 10.0% |
| !!! | TTGTCAATTTTTAATTTTTA+TGG | + | chr7.3:72548189-72548208 | MS.gene001931:intron | 10.0% |
| !! | ATATATAAATATGTTTGTGT+TGG | + | chr7.3:72548848-72548867 | MS.gene001931:intron | 15.0% |
| !! | ATTAAGTCTACTAATTAAAT+TGG | - | chr7.3:72549952-72549971 | None:intergenic | 15.0% |
| !! | GTGAATAAAAATTAGTTATA+AGG | - | chr7.3:72551702-72551721 | None:intergenic | 15.0% |
| !! | AAGAACACATTTATATCTAA+TGG | - | chr7.3:72550097-72550116 | None:intergenic | 20.0% |
| !! | AAGTAAAGTCAAGTTAAAAA+TGG | - | chr7.3:72548756-72548775 | None:intergenic | 20.0% |
| !! | AATGAAACTTAACAGTATAT+AGG | - | chr7.3:72551233-72551252 | None:intergenic | 20.0% |
| !! | ACAAAAATCCAATTAATACT+TGG | - | chr7.3:72549394-72549413 | None:intergenic | 20.0% |
| !! | ATATACTGTTAAGTTTCATT+CGG | + | chr7.3:72551233-72551252 | MS.gene001931:intron | 20.0% |
| !! | ATGAAGAATAAATATTACCT+AGG | - | chr7.3:72547953-72547972 | None:intergenic | 20.0% |
| !!! | ATAAGATTGTTTTTTTTTGC+AGG | + | chr7.3:72549170-72549189 | MS.gene001931:intron | 20.0% |
| !!! | CAATTTTGTGAAAATATAGA+GGG | - | chr7.3:72548977-72548996 | None:intergenic | 20.0% |
| !!! | TCAATTTTGTGAAAATATAG+AGG | - | chr7.3:72548978-72548997 | None:intergenic | 20.0% |
| !!! | TTTGAAATTGGTTTTGATTT+TGG | + | chr7.3:72549637-72549656 | MS.gene001931:intron | 20.0% |
| !!! | TTTTCATCAAAGTGAATATT+TGG | + | chr7.3:72549741-72549760 | MS.gene001931:intron | 20.0% |
| !!! | TTTTGACAATCTATAGTTAA+GGG | - | chr7.3:72550169-72550188 | None:intergenic | 20.0% |
| !!! | TTTTTGACAATCTATAGTTA+AGG | - | chr7.3:72550170-72550189 | None:intergenic | 20.0% |
| ! | AAAACAAAAACTAGGCTTAA+CGG | - | chr7.3:72551507-72551526 | None:intergenic | 25.0% |
| ! | AAAATAAGCTGATGTTTGTT+TGG | + | chr7.3:72551563-72551582 | MS.gene001931:intron | 25.0% |
| ! | AAGAATAAATATTACCTAGG+TGG | - | chr7.3:72547950-72547969 | None:intergenic | 25.0% |
| ! | ACTAAAATATGTTTGTATGC+AGG | + | chr7.3:72551839-72551858 | MS.gene001931:intron | 25.0% |
| ! | AGAATAAATATTACCTAGGT+GGG | - | chr7.3:72547949-72547968 | None:intergenic | 25.0% |
| ! | ATGATAAATAATAACACACC+TGG | + | chr7.3:72551456-72551475 | MS.gene001931:intron | 25.0% |
| ! | CTAAAATATGTTTGTATGCA+GGG | + | chr7.3:72551840-72551859 | MS.gene001931:intron | 25.0% |
| ! | GCCAAAAAAAAACAAAAACT+AGG | - | chr7.3:72551515-72551534 | None:intergenic | 25.0% |
| ! | GTCTACTAATTAAATTGGTA+TGG | - | chr7.3:72549947-72549966 | None:intergenic | 25.0% |
| ! | TAAAATATGTTTGTATGCAG+GGG | + | chr7.3:72551841-72551860 | MS.gene001931:intron | 25.0% |
| ! | TAAGGGACAACATATTATTA+TGG | - | chr7.3:72550152-72550171 | None:intergenic | 25.0% |
| ! | TATGAACCTTGTGATTAAAA+AGG | + | chr7.3:72549248-72549267 | MS.gene001931:CDS | 25.0% |
| ! | TTAATGAACTCGAATCAATT+TGG | + | chr7.3:72548353-72548372 | MS.gene001931:intron | 25.0% |
| ! | TTGAGTTCTCAAATTATTAG+CGG | + | chr7.3:72549066-72549085 | MS.gene001931:intron | 25.0% |
| !! | AAAGATAACAGTTTGACTTT+AGG | - | chr7.3:72551048-72551067 | None:intergenic | 25.0% |
| !! | AAGTCATTGATTATATTCAG+AGG | + | chr7.3:72549468-72549487 | MS.gene001931:CDS | 25.0% |
| !! | AGTCATTGATTATATTCAGA+GGG | + | chr7.3:72549469-72549488 | MS.gene001931:CDS | 25.0% |
| !! | GGAATATGTAGATTTGAAAT+TGG | + | chr7.3:72549625-72549644 | MS.gene001931:intron | 25.0% |
| !! | TAATTTCCTCTCTTAACTTT+TGG | + | chr7.3:72549308-72549327 | MS.gene001931:intron | 25.0% |
| !! | TATAAGCCTTTTTAATCACA+AGG | - | chr7.3:72549257-72549276 | None:intergenic | 25.0% |
| !! | TGGTTTTCTGTATTTGTTTA+GGG | + | chr7.3:72550896-72550915 | MS.gene001931:intron | 25.0% |
| !!! | ATGTTTTTGAAAGTGTTGTT+TGG | + | chr7.3:72551749-72551768 | MS.gene001931:intron | 25.0% |
| !!! | ATTTACGCTATTTTTTACAG+TGG | + | chr7.3:72548099-72548118 | MS.gene001931:intron | 25.0% |
| !!! | CTACAGTCAAATTTTTTTGA+AGG | - | chr7.3:72548127-72548146 | None:intergenic | 25.0% |
| !!! | CTATTTCTTCTTTTTTTGAC+TGG | - | chr7.3:72549025-72549044 | None:intergenic | 25.0% |
| !!! | GCCTAGTTTTTGTTTTTTTT+TGG | + | chr7.3:72551511-72551530 | MS.gene001931:intron | 25.0% |
| !!! | TCTTTTCTTTAAGAGAAGTT+AGG | - | chr7.3:72551775-72551794 | None:intergenic | 25.0% |
| !!! | TTGGTTTTCTGTATTTGTTT+AGG | + | chr7.3:72550895-72550914 | MS.gene001931:intron | 25.0% |
| !!! | TTGTTCAGGAGTTTTATATT+CGG | + | chr7.3:72551341-72551360 | MS.gene001931:intron | 25.0% |
| !!! | TTTTTCAGTGTTTAATGTGA+CGG | + | chr7.3:72549415-72549434 | MS.gene001931:intron | 25.0% |
| AAAACGATCCTAAAATTCAG+AGG | - | chr7.3:72549678-72549697 | None:intergenic | 30.0% | |
| AAACCAACGTAATTTCGATT+AGG | - | chr7.3:72549816-72549835 | None:intergenic | 30.0% | |
| AAACTTAACAGTATATAGGC+CGG | - | chr7.3:72551229-72551248 | None:intergenic | 30.0% | |
| AAATTGCAATCTATGAAGCA+CGG | - | chr7.3:72549133-72549152 | None:intergenic | 30.0% | |
| AATATCAACAGAAAACGGAA+AGG | + | chr7.3:72551959-72551978 | MS.gene001931:CDS | 30.0% | |
| ACAACAATTGGATTTCTCTT+TGG | + | chr7.3:72552122-72552141 | MS.gene001931:CDS | 30.0% | |
| ACAATATCAAACAACAGCTT+CGG | - | chr7.3:72550749-72550768 | None:intergenic | 30.0% | |
| ACTTGACTTTACTTACCTTA+TGG | + | chr7.3:72548762-72548781 | MS.gene001931:intron | 30.0% | |
| AGTATACCATTGAAGAATGA+GGG | - | chr7.3:72551822-72551841 | None:intergenic | 30.0% | |
| ATATGTTTGTGTTGGAATTG+TGG | + | chr7.3:72548856-72548875 | MS.gene001931:intron | 30.0% | |
| ATCAAAGTGAATATTTGGAG+GGG | + | chr7.3:72549746-72549765 | MS.gene001931:intron | 30.0% | |
| ATTGATTATATTCAGAGGGT+AGG | + | chr7.3:72549473-72549492 | MS.gene001931:intron | 30.0% | |
| CATCAAAGTGAATATTTGGA+GGG | + | chr7.3:72549745-72549764 | MS.gene001931:intron | 30.0% | |
| CGGATTGAATCAATAATCTT+CGG | - | chr7.3:72552032-72552051 | None:intergenic | 30.0% | |
| CTTCTGATCCAAGTATTAAT+TGG | + | chr7.3:72549383-72549402 | MS.gene001931:intron | 30.0% | |
| GCAGAAATATCAACAGAAAA+CGG | + | chr7.3:72551954-72551973 | MS.gene001931:CDS | 30.0% | |
| TAATAAGTGCTTACGCTATA+AGG | - | chr7.3:72550981-72551000 | None:intergenic | 30.0% | |
| TAGTATACCATTGAAGAATG+AGG | - | chr7.3:72551823-72551842 | None:intergenic | 30.0% | |
| TATGTAAGTTTGAATCCAAG+TGG | + | chr7.3:72548432-72548451 | MS.gene001931:intron | 30.0% | |
| TCATCAAAGTGAATATTTGG+AGG | + | chr7.3:72549744-72549763 | MS.gene001931:intron | 30.0% | |
| TGGTTACGCATATTCATATA+TGG | - | chr7.3:72548314-72548333 | None:intergenic | 30.0% | |
| TTAATGAACTCGAATCGATT+TGG | + | chr7.3:72548469-72548488 | MS.gene001931:intron | 30.0% | |
| TTAATGAGCTCAAATCGATT+TGG | + | chr7.3:72548579-72548598 | MS.gene001931:intron | 30.0% | |
| TTCATGAACTTGAATCGATT+TGG | + | chr7.3:72548703-72548722 | MS.gene001931:intron | 30.0% | |
| TTGCGTTATTGACAAAAGTA+TGG | - | chr7.3:72549990-72550009 | None:intergenic | 30.0% | |
| TTTCCTAATCGAAATTACGT+TGG | + | chr7.3:72549810-72549829 | MS.gene001931:intron | 30.0% | |
| TTTCTGTATTCTTTGAGCAA+AGG | + | chr7.3:72549834-72549853 | MS.gene001931:intron | 30.0% | |
| ! | AACTTTTGGCATGCATAATT+CGG | + | chr7.3:72549322-72549341 | MS.gene001931:intron | 30.0% |
| ! | AATCTTCAAGTTAAGTAAGC+AGG | + | chr7.3:72549591-72549610 | MS.gene001931:intron | 30.0% |
| ! | ATCAATCACCTCTGAATTTT+AGG | + | chr7.3:72549667-72549686 | MS.gene001931:intron | 30.0% |
| ! | ATCAGATTATGTTTGCTGAT+AGG | + | chr7.3:72550600-72550619 | MS.gene001931:CDS | 30.0% |
| ! | ATGAGCTTTTCAAATCAAGT+AGG | - | chr7.3:72551657-72551676 | None:intergenic | 30.0% |
| ! | ATGCAGTATGTAGTTTTTCA+TGG | + | chr7.3:72550785-72550804 | MS.gene001931:CDS | 30.0% |
| ! | GAAATGATCGTTCAACTTTT+TGG | + | chr7.3:72550876-72550895 | MS.gene001931:intron | 30.0% |
| ! | GGTTCATATCTGAAATAACT+TGG | - | chr7.3:72549236-72549255 | None:intergenic | 30.0% |
| ! | TCAGATTATGTTTGCTGATA+GGG | + | chr7.3:72550601-72550620 | MS.gene001931:CDS | 30.0% |
| ! | TGCGTTATTGACAAAAGTAT+GGG | - | chr7.3:72549989-72550008 | None:intergenic | 30.0% |
| ! | TTTACTATCTGAAATCTGTG+CGG | + | chr7.3:72550343-72550362 | MS.gene001931:CDS | 30.0% |
| !! | TGAAGATTTCTAGCAAAGAA+CGG | - | chr7.3:72549579-72549598 | None:intergenic | 30.0% |
| !!! | GTTTTTTGTAAGAGTGCTTA+TGG | - | chr7.3:72551158-72551177 | None:intergenic | 30.0% |
| !!! | TCTCTTTGGAAGTTTTTTCA+AGG | + | chr7.3:72552136-72552155 | MS.gene001931:CDS | 30.0% |
| AAACAGAACCTATGTTTGAC+GGG | - | chr7.3:72550935-72550954 | None:intergenic | 35.0% | |
| AACTAGATTGTTGCTATGCA+GGG | + | chr7.3:72548889-72548908 | MS.gene001931:intron | 35.0% | |
| AACTTAACAGTATATAGGCC+GGG | - | chr7.3:72551228-72551247 | None:intergenic | 35.0% | |
| AAGGCTTATATTTCCTCTGA+TGG | + | chr7.3:72549267-72549286 | MS.gene001931:CDS | 35.0% | |
| AGATTTGGACGCATAATACT+AGG | + | chr7.3:72550402-72550421 | MS.gene001931:CDS | 35.0% | |
| AGTATTATGCGTCCAAATCT+CGG | - | chr7.3:72550402-72550421 | None:intergenic | 35.0% | |
| ATATTTCCTCTGATGGAGTT+TGG | + | chr7.3:72549274-72549293 | MS.gene001931:CDS | 35.0% | |
| CAAACAGAACCTATGTTTGA+CGG | - | chr7.3:72550936-72550955 | None:intergenic | 35.0% | |
| CAATAATCTTCGGATCAACT+GGG | - | chr7.3:72552022-72552041 | None:intergenic | 35.0% | |
| CACACTGTTATTGAACTTAC+TGG | + | chr7.3:72550305-72550324 | MS.gene001931:CDS | 35.0% | |
| CAGATTTCAGATAGTAAACC+AGG | - | chr7.3:72550341-72550360 | None:intergenic | 35.0% | |
| CATCAGGATGCAAAAAATGA+GGG | - | chr7.3:72549702-72549721 | None:intergenic | 35.0% | |
| CTATTAACTGGAAATTCGCA+TGG | - | chr7.3:72550020-72550039 | None:intergenic | 35.0% | |
| CTTACCTTATGGTTGAAATC+CGG | + | chr7.3:72548773-72548792 | MS.gene001931:intron | 35.0% | |
| GAGAATTGTTCATGTTGTTC+AGG | + | chr7.3:72551327-72551346 | MS.gene001931:intron | 35.0% | |
| GATTTGGACGCATAATACTA+GGG | + | chr7.3:72550403-72550422 | MS.gene001931:CDS | 35.0% | |
| GGACTTAGAGAAAGAGATAA+AGG | + | chr7.3:72550647-72550666 | MS.gene001931:CDS | 35.0% | |
| GTTGAACGATCATTTCCTAA+CGG | - | chr7.3:72550872-72550891 | None:intergenic | 35.0% | |
| GTTGACAGTGTAAACAAACA+CGG | + | chr7.3:72549192-72549211 | MS.gene001931:CDS | 35.0% | |
| TAACTAGATTGTTGCTATGC+AGG | + | chr7.3:72548888-72548907 | MS.gene001931:intron | 35.0% | |
| TACTGAAAGGGATTATACTG+TGG | + | chr7.3:72550700-72550719 | MS.gene001931:CDS | 35.0% | |
| TATGAATATGCGTAACCAAG+TGG | + | chr7.3:72548316-72548335 | MS.gene001931:intron | 35.0% | |
| TCAAAGTGAATATTTGGAGG+GGG | + | chr7.3:72549747-72549766 | MS.gene001931:intron | 35.0% | |
| TCAATAATCTTCGGATCAAC+TGG | - | chr7.3:72552023-72552042 | None:intergenic | 35.0% | |
| TCTCAAATTATTAGCGGTGT+CGG | + | chr7.3:72549072-72549091 | MS.gene001931:intron | 35.0% | |
| TGAAATAAGTCATTCCAACC+CGG | + | chr7.3:72551207-72551226 | MS.gene001931:intron | 35.0% | |
| TGCATTGTAATATAACAGCC+AGG | - | chr7.3:72550064-72550083 | None:intergenic | 35.0% | |
| TTAATGACCTCGAATCGATT+TGG | + | chr7.3:72548641-72548660 | MS.gene001931:intron | 35.0% | |
| TTACCTTATGGTTGAAATCC+GGG | + | chr7.3:72548774-72548793 | MS.gene001931:intron | 35.0% | |
| TTGACAGTGTAAACAAACAC+GGG | + | chr7.3:72549193-72549212 | MS.gene001931:CDS | 35.0% | |
| TTTGAATCCAAGTGGTTAGT+TGG | + | chr7.3:72548502-72548521 | MS.gene001931:intron | 35.0% | |
| ! | AATCCAATTGTTGTTCCTTG+AGG | - | chr7.3:72552116-72552135 | None:intergenic | 35.0% |
| ! | ACTTTTGGCATGCATAATTC+GGG | + | chr7.3:72549323-72549342 | MS.gene001931:intron | 35.0% |
| ! | ATCATCGGTTACATGAACTA+CGG | - | chr7.3:72550435-72550454 | None:intergenic | 35.0% |
| ! | GCGTTATTGACAAAAGTATG+GGG | - | chr7.3:72549988-72550007 | None:intergenic | 35.0% |
| ! | GTATGTAGTTTTTCATGGTG+TGG | + | chr7.3:72550790-72550809 | MS.gene001931:CDS | 35.0% |
| ! | TGATTTGGAGTACTTGAGTT+TGG | + | chr7.3:72548532-72548551 | MS.gene001931:intron | 35.0% |
| ! | TTTTATATTCGGCACGTTGA+TGG | + | chr7.3:72551352-72551371 | MS.gene001931:CDS | 35.0% |
| !! | ATATTTTGTTGTCTGCCGTT+AGG | + | chr7.3:72550854-72550873 | MS.gene001931:intron | 35.0% |
| !! | CCTCTCTGGAATTATAATCT+GGG | + | chr7.3:72548224-72548243 | MS.gene001931:intron | 35.0% |
| !! | GCTGTTTTATTAAGCTATCC+TGG | + | chr7.3:72551079-72551098 | MS.gene001931:intron | 35.0% |
| !! | TCCTCTCTGGAATTATAATC+TGG | + | chr7.3:72548223-72548242 | MS.gene001931:intron | 35.0% |
| !! | TTAGTTGGCTCGAATTGATT+TGG | + | chr7.3:72548517-72548536 | MS.gene001931:intron | 35.0% |
| !! | TTTAATGTGACGGATCGAAA+TGG | + | chr7.3:72549425-72549444 | MS.gene001931:CDS | 35.0% |
| AAAACTGCACTTTCACATCC+TGG | + | chr7.3:72550551-72550570 | MS.gene001931:CDS | 40.0% | |
| AAACAAACACGGGATACTCT+TGG | + | chr7.3:72549203-72549222 | MS.gene001931:CDS | 40.0% | |
| AAATCCTTGTGATATCCGAG+AGG | - | chr7.3:72551905-72551924 | None:intergenic | 40.0% | |
| AACACACCCTCATTCTTCAA+TGG | + | chr7.3:72551813-72551832 | MS.gene001931:intron | 40.0% | |
| AACCACTTCGATTCAAACTC+AGG | - | chr7.3:72548609-72548628 | None:intergenic | 40.0% | |
| AACCACTTGGATTCAAACTC+AGG | - | chr7.3:72548499-72548518 | None:intergenic | 40.0% | |
| AACTGGGTTACCAGTTACAT+CGG | - | chr7.3:72552006-72552025 | None:intergenic | 40.0% | |
| AAGACAATCCCGTCAAACAT+AGG | + | chr7.3:72550924-72550943 | MS.gene001931:intron | 40.0% | |
| AAGCCATACCTGAATAACAG+TGG | - | chr7.3:72548945-72548964 | None:intergenic | 40.0% | |
| AATCCCGGATTTCAACCATA+AGG | - | chr7.3:72548780-72548799 | None:intergenic | 40.0% | |
| AATCCCTTATTGTGGAGAGA+CGG | - | chr7.3:72550487-72550506 | None:intergenic | 40.0% | |
| ACAGAGCAAATCCCTTATTG+TGG | - | chr7.3:72550495-72550514 | None:intergenic | 40.0% | |
| ACATCCTGGAGTTACGTATA+GGG | + | chr7.3:72550565-72550584 | MS.gene001931:CDS | 40.0% | |
| AGTAAGCAGGACAACGATAT+TGG | + | chr7.3:72549604-72549623 | MS.gene001931:intron | 40.0% | |
| AGTTTCATTCGGTCAGAACA+TGG | + | chr7.3:72551244-72551263 | MS.gene001931:intron | 40.0% | |
| ATAACAGTGTGCTCTTCAGT+AGG | - | chr7.3:72550296-72550315 | None:intergenic | 40.0% | |
| ATATGTTTGTATGCAGGGGA+TGG | + | chr7.3:72551845-72551864 | MS.gene001931:intron | 40.0% | |
| ATTTGCTCTGTAACGTGCTT+CGG | + | chr7.3:72550504-72550523 | MS.gene001931:CDS | 40.0% | |
| CAAAGTGAATATTTGGAGGG+GGG | + | chr7.3:72549748-72549767 | MS.gene001931:intron | 40.0% | |
| CATAAACCAAACTCCATCAG+AGG | - | chr7.3:72549283-72549302 | None:intergenic | 40.0% | |
| CATCTCGGCTAACTATTAAC+TGG | - | chr7.3:72550032-72550051 | None:intergenic | 40.0% | |
| CCCAGATTATAATTCCAGAG+AGG | - | chr7.3:72548227-72548246 | None:intergenic | 40.0% | |
| CGTCAAACATAGGTTCTGTT+TGG | + | chr7.3:72550934-72550953 | MS.gene001931:intron | 40.0% | |
| GAGACAGTTACATGTGGAAA+TGG | - | chr7.3:72550674-72550693 | None:intergenic | 40.0% | |
| GAGTTTGAATCCAAGTGGTT+AGG | + | chr7.3:72548499-72548518 | MS.gene001931:intron | 40.0% | |
| GAGTTTGAATCGAAGTGGTT+TGG | + | chr7.3:72548609-72548628 | MS.gene001931:intron | 40.0% | |
| GATTCAATCCGTAGACAGAT+CGG | + | chr7.3:72552041-72552060 | MS.gene001931:CDS | 40.0% | |
| GCATCAGGATGCAAAAAATG+AGG | - | chr7.3:72549703-72549722 | None:intergenic | 40.0% | |
| GCTTATACAGTGTCTTGAAG+CGG | + | chr7.3:72551408-72551427 | MS.gene001931:CDS | 40.0% | |
| GGACTATGAAAGGGTTGAAA+GGG | + | chr7.3:72550622-72550641 | MS.gene001931:CDS | 40.0% | |
| GTTTCATTCGGTCAGAACAT+GGG | + | chr7.3:72551245-72551264 | MS.gene001931:intron | 40.0% | |
| TACCTGAGTTTGAACATAGC+TGG | + | chr7.3:72548728-72548747 | MS.gene001931:intron | 40.0% | |
| TACCTGAGTTTGAATCCAAG+TGG | + | chr7.3:72548378-72548397 | MS.gene001931:intron | 40.0% | |
| TACCTGAGTTTGAATCGAAG+TGG | + | chr7.3:72548604-72548623 | MS.gene001931:intron | 40.0% | |
| TACTTGAGTTTGGATCCTAG+TGG | + | chr7.3:72548542-72548561 | MS.gene001931:intron | 40.0% | |
| TGAAAACGCCACTGTTATTC+AGG | + | chr7.3:72548934-72548953 | MS.gene001931:CDS | 40.0% | |
| TGCATGCCAAAAGTTAAGAG+AGG | - | chr7.3:72549317-72549336 | None:intergenic | 40.0% | |
| TGCTGATAGGGACTATGAAA+GGG | + | chr7.3:72550613-72550632 | MS.gene001931:CDS | 40.0% | |
| TGTAATATAACAGCCAGGTC+AGG | - | chr7.3:72550059-72550078 | None:intergenic | 40.0% | |
| TGTCTCAGACTGTACTGAAA+GGG | + | chr7.3:72550688-72550707 | MS.gene001931:CDS | 40.0% | |
| TTCCAGCTATGTTCAAACTC+AGG | - | chr7.3:72548733-72548752 | None:intergenic | 40.0% | |
| TTGCTGATAGGGACTATGAA+AGG | + | chr7.3:72550612-72550631 | MS.gene001931:CDS | 40.0% | |
| ! | CTCTGATGGAGTTTGGTTTA+TGG | + | chr7.3:72549281-72549300 | MS.gene001931:CDS | 40.0% |
| ! | GATGGAGTTTGGTTTATGGA+TGG | + | chr7.3:72549285-72549304 | MS.gene001931:CDS | 40.0% |
| ! | TTTTACGTCACCGATGTAAC+TGG | + | chr7.3:72551993-72552012 | MS.gene001931:CDS | 40.0% |
| ! | TTTTTGTTGCTCCATCTCTG+TGG | + | chr7.3:72549540-72549559 | MS.gene001931:intron | 40.0% |
| !! | AGTGCAGTTTTTGCTGTCTT+CGG | - | chr7.3:72550542-72550561 | None:intergenic | 40.0% |
| !! | CTGGGTTTGTTGCATGTATT+TGG | + | chr7.3:72548242-72548261 | MS.gene001931:intron | 40.0% |
| !! | GGTTTGTTGCATGTATTTGG+TGG | + | chr7.3:72548245-72548264 | MS.gene001931:intron | 40.0% |
| AAATCACCCTTCCACAGAGA+TGG | - | chr7.3:72549554-72549573 | None:intergenic | 45.0% | |
| ACCACTTGAACCTAACCACT+TGG | - | chr7.3:72548684-72548703 | None:intergenic | 45.0% | |
| ACCACTTGAGCAAAACCACT+TGG | - | chr7.3:72548334-72548353 | None:intergenic | 45.0% | |
| ACCACTTGAGCTTAACCACT+TGG | - | chr7.3:72548450-72548469 | None:intergenic | 45.0% | |
| ACGCCACTGTTATTCAGGTA+TGG | + | chr7.3:72548939-72548958 | MS.gene001931:intron | 45.0% | |
| AGCCAATTAACCACTTGAGC+CGG | - | chr7.3:72548405-72548424 | None:intergenic | 45.0% | |
| AGGTTGTGTGTATGAACCTG+CGG | + | chr7.3:72549854-72549873 | MS.gene001931:intron | 45.0% | |
| ATCCCTTATTGTGGAGAGAC+GGG | - | chr7.3:72550486-72550505 | None:intergenic | 45.0% | |
| ATGAAGCACGGATACAGACA+CGG | - | chr7.3:72549121-72549140 | None:intergenic | 45.0% | |
| ATGGTGTGGTTCAGACAGAA+AGG | + | chr7.3:72550804-72550823 | MS.gene001931:CDS | 45.0% | |
| ATGGTTGAAATCCGGGATTC+CGG | + | chr7.3:72548781-72548800 | MS.gene001931:intron | 45.0% | |
| ATTATGCGTCCAAATCTCGG+CGG | - | chr7.3:72550399-72550418 | None:intergenic | 45.0% | |
| ATTCGAGCCAACTAACCACT+TGG | - | chr7.3:72548512-72548531 | None:intergenic | 45.0% | |
| CACATCCTGGAGTTACGTAT+AGG | + | chr7.3:72550564-72550583 | MS.gene001931:CDS | 45.0% | |
| CATGTAACCGATGATTCCAG+TGG | + | chr7.3:72550440-72550459 | MS.gene001931:CDS | 45.0% | |
| CCACCTCAAGGAACAACAAT+TGG | + | chr7.3:72552110-72552129 | MS.gene001931:CDS | 45.0% | |
| CTATCCCTATACGTAACTCC+AGG | - | chr7.3:72550572-72550591 | None:intergenic | 45.0% | |
| CTCATCGACGTTTCAAAGCT+CGG | - | chr7.3:72550254-72550273 | None:intergenic | 45.0% | |
| CTGTCTCAGACTGTACTGAA+AGG | + | chr7.3:72550687-72550706 | MS.gene001931:CDS | 45.0% | |
| CTTATCTCAAGAAGCTCTCC+AGG | - | chr7.3:72551100-72551119 | None:intergenic | 45.0% | |
| CTTTCACCAAAACCACCTCA+AGG | + | chr7.3:72552098-72552117 | MS.gene001931:CDS | 45.0% | |
| GACCACTTGGATTCAAACTC+AGG | - | chr7.3:72548383-72548402 | None:intergenic | 45.0% | |
| GAGTTTGAATCCAAGTGGTC+CGG | + | chr7.3:72548383-72548402 | MS.gene001931:intron | 45.0% | |
| GAGTTTGGATCCTAGTGGTT+CGG | + | chr7.3:72548547-72548566 | MS.gene001931:intron | 45.0% | |
| GGACTTCATCATTTCCTCTC+TGG | + | chr7.3:72548210-72548229 | MS.gene001931:intron | 45.0% | |
| GGGACTATGAAAGGGTTGAA+AGG | + | chr7.3:72550621-72550640 | MS.gene001931:CDS | 45.0% | |
| TAACAGTATATAGGCCGGGT+TGG | - | chr7.3:72551224-72551243 | None:intergenic | 45.0% | |
| TATGAAAGGGTTGAAAGGGC+AGG | + | chr7.3:72550626-72550645 | MS.gene001931:CDS | 45.0% | |
| TCCAAGTGGTTAAGCTCAAG+TGG | + | chr7.3:72548446-72548465 | MS.gene001931:intron | 45.0% | |
| TCCAAGTGGTTAGGTTCAAG+TGG | + | chr7.3:72548680-72548699 | MS.gene001931:intron | 45.0% | |
| TGGTTCAGACAGAAAGGACA+GGG | + | chr7.3:72550810-72550829 | MS.gene001931:CDS | 45.0% | |
| TTGAACTTACTGGCACAGAC+AGG | + | chr7.3:72550315-72550334 | MS.gene001931:CDS | 45.0% | |
| TTGTGCACAGAAGATCGTGT+AGG | + | chr7.3:72551876-72551895 | MS.gene001931:CDS | 45.0% | |
| TTTGCTCTGTAACGTGCTTC+GGG | + | chr7.3:72550505-72550524 | MS.gene001931:CDS | 45.0% | |
| ! | CAGTCTGAGACAGTTACATG+TGG | - | chr7.3:72550680-72550699 | None:intergenic | 45.0% |
| ! | CCAATTGTTGTTCCTTGAGG+TGG | - | chr7.3:72552113-72552132 | None:intergenic | 45.0% |
| ! | GTTGTTCCTTGAGGTGGTTT+TGG | - | chr7.3:72552107-72552126 | None:intergenic | 45.0% |
| !! | ACCAAGTGGTTTTGCTCAAG+TGG | + | chr7.3:72548330-72548349 | MS.gene001931:intron | 45.0% |
| !! | AGGTACTCCAAATCGATTCG+AGG | - | chr7.3:72548479-72548498 | None:intergenic | 45.0% |
| ACGTCGATGAGAGAGTCTGT+TGG | + | chr7.3:72550263-72550282 | MS.gene001931:CDS | 50.0% | |
| AGAAAGGACAGGGGCTTATC+AGG | + | chr7.3:72550820-72550839 | MS.gene001931:CDS | 50.0% | |
| AGATCGTGTAGGACTCCTCT+CGG | + | chr7.3:72551887-72551906 | MS.gene001931:CDS | 50.0% | |
| ATCCTCTATGGCACAACCAC+TGG | - | chr7.3:72550459-72550478 | None:intergenic | 50.0% | |
| ATGAACCTGCGGGATTCATC+TGG | + | chr7.3:72549865-72549884 | MS.gene001931:intron | 50.0% | |
| CATGCGCTTGAAACTGTGTG+CGG | - | chr7.3:72549892-72549911 | None:intergenic | 50.0% | |
| CATTCGGTCAGAACATGGGT+TGG | + | chr7.3:72551249-72551268 | MS.gene001931:intron | 50.0% | |
| CGACAGCTAGATCATGCATC+AGG | - | chr7.3:72549718-72549737 | None:intergenic | 50.0% | |
| CGTCGATGAGAGAGTCTGTT+GGG | + | chr7.3:72550264-72550283 | MS.gene001931:CDS | 50.0% | |
| CTCTCAGCCTCTGAGCTTAT+GGG | - | chr7.3:72551382-72551401 | None:intergenic | 50.0% | |
| CTTATTGTGGAGAGACGGGA+CGG | - | chr7.3:72550482-72550501 | None:intergenic | 50.0% | |
| GACTCCTCTCGGATATCACA+AGG | + | chr7.3:72551898-72551917 | MS.gene001931:CDS | 50.0% | |
| GGCACAACCACTGGAATCAT+CGG | - | chr7.3:72550450-72550469 | None:intergenic | 50.0% | |
| GGTTCAGACAGAAAGGACAG+GGG | + | chr7.3:72550811-72550830 | MS.gene001931:CDS | 50.0% | |
| GGTTGTGTGTATGAACCTGC+GGG | + | chr7.3:72549855-72549874 | MS.gene001931:intron | 50.0% | |
| GTCCCGTCTCTCCACAATAA+GGG | + | chr7.3:72550481-72550500 | MS.gene001931:CDS | 50.0% | |
| GTCCGGCTCAAGTGGTTAAT+TGG | + | chr7.3:72548400-72548419 | MS.gene001931:intron | 50.0% | |
| GTCGATGAGAGAGTCTGTTG+GGG | + | chr7.3:72550265-72550284 | MS.gene001931:CDS | 50.0% | |
| GTCTTGAAGCGGCAATTGAG+AGG | + | chr7.3:72551419-72551438 | MS.gene001931:CDS | 50.0% | |
| GTGGTTCAGACAGAAAGGAC+AGG | + | chr7.3:72550809-72550828 | MS.gene001931:CDS | 50.0% | |
| GTTGCTCCATCTCTGTGGAA+GGG | + | chr7.3:72549545-72549564 | MS.gene001931:intron | 50.0% | |
| TCTCTCAGCCTCTGAGCTTA+TGG | - | chr7.3:72551383-72551402 | None:intergenic | 50.0% | |
| TGGCTTTCCCATAAGCTCAG+AGG | + | chr7.3:72551372-72551391 | MS.gene001931:CDS | 50.0% | |
| TGTTGCTCCATCTCTGTGGA+AGG | + | chr7.3:72549544-72549563 | MS.gene001931:intron | 50.0% | |
| TTCCAGTGGTTGTGCCATAG+AGG | + | chr7.3:72550454-72550473 | MS.gene001931:CDS | 50.0% | |
| TTGAAGCGGCAATTGAGAGG+CGG | + | chr7.3:72551422-72551441 | MS.gene001931:CDS | 50.0% | |
| TTGCTCTGTAACGTGCTTCG+GGG | + | chr7.3:72550506-72550525 | MS.gene001931:CDS | 50.0% | |
| TTGGTCCTAACCCTCTGACT+CGG | - | chr7.3:72548823-72548842 | None:intergenic | 50.0% | |
| ! | TCGAAGTGGTTTGGCTCAAG+TGG | + | chr7.3:72548618-72548637 | MS.gene001931:intron | 50.0% |
| !! | GGGTTGGTCTGCTTCAGTTT+GGG | + | chr7.3:72551265-72551284 | MS.gene001931:intron | 50.0% |
| !! | TGGGTTGGTCTGCTTCAGTT+TGG | + | chr7.3:72551264-72551283 | MS.gene001931:intron | 50.0% |
| AATTGAGAGGCGGGCATCTG+AGG | + | chr7.3:72551432-72551451 | MS.gene001931:CDS | 55.0% | |
| ACAGACACGGACACCAGACA+CGG | - | chr7.3:72549108-72549127 | None:intergenic | 55.0% | |
| ACCACTTGAGCCGAACCACT+AGG | - | chr7.3:72548560-72548579 | None:intergenic | 55.0% | |
| ACGTGGTTACCGCCGAGATT+TGG | + | chr7.3:72550387-72550406 | MS.gene001931:CDS | 55.0% | |
| CGGTAACCACGTTACAGCGA+AGG | - | chr7.3:72550379-72550398 | None:intergenic | 55.0% | |
| CGTCCCGTCTCTCCACAATA+AGG | + | chr7.3:72550480-72550499 | MS.gene001931:CDS | 55.0% | |
| CTTAACGGCCTCAAAGAGCG+AGG | - | chr7.3:72551492-72551511 | None:intergenic | 55.0% | |
| GCCAGGTCAGGTCAACATCT+CGG | - | chr7.3:72550047-72550066 | None:intergenic | 55.0% | |
| GCTCAGAGGCTGAGAGAGAA+CGG | + | chr7.3:72551386-72551405 | MS.gene001931:CDS | 55.0% | |
| GGGCTACTAATCCGGAATCC+CGG | - | chr7.3:72548795-72548814 | None:intergenic | 55.0% | |
| TGAAGCGGCAATTGAGAGGC+GGG | + | chr7.3:72551423-72551442 | MS.gene001931:CDS | 55.0% | |
| TGGTCCTAACCCTCTGACTC+GGG | - | chr7.3:72548822-72548841 | None:intergenic | 55.0% | |
| TTGTATGCAGGGGATGGAGC+TGG | + | chr7.3:72551851-72551870 | MS.gene001931:intron | 55.0% | |
| ! | TCCTAGTGGTTCGGCTCAAG+TGG | + | chr7.3:72548556-72548575 | MS.gene001931:intron | 55.0% |
| !! | CTAACCCTCTGACTCGGGAA+GGG | - | chr7.3:72548817-72548836 | None:intergenic | 55.0% |
| !! | TAACCCTCTGACTCGGGAAG+GGG | - | chr7.3:72548816-72548835 | None:intergenic | 55.0% |
| ACCACTTGAGCCGGACCACT+TGG | - | chr7.3:72548396-72548415 | None:intergenic | 60.0% | |
| CCGTAGACAGATCGGCGACA+CGG | + | chr7.3:72552049-72552068 | MS.gene001931:CDS | 60.0% | |
| CCGTGTCGCCGATCTGTCTA+CGG | - | chr7.3:72552052-72552071 | None:intergenic | 60.0% | |
| CCTTCCCGAGTCAGAGGGTT+AGG | + | chr7.3:72548815-72548834 | MS.gene001931:intron | 60.0% | |
| CGCAGACCTTCGCTGTAACG+TGG | + | chr7.3:72550370-72550389 | MS.gene001931:CDS | 60.0% | |
| CGGGAAGGGGGCTACTAATC+CGG | - | chr7.3:72548803-72548822 | None:intergenic | 60.0% | |
| CTTACTGGCACAGACAGGCC+TGG | + | chr7.3:72550320-72550339 | MS.gene001931:CDS | 60.0% | |
| GAGACGGGACGGATCCTCTA+TGG | - | chr7.3:72550471-72550490 | None:intergenic | 60.0% | |
| GCCGAGATGTTGACCTGACC+TGG | + | chr7.3:72550043-72550062 | MS.gene001931:intron | 60.0% | |
| GCTCCATGCCTCGCTCTTTG+AGG | + | chr7.3:72551481-72551500 | MS.gene001931:intron | 60.0% | |
| TCCAAGTGGTCCGGCTCAAG+TGG | + | chr7.3:72548392-72548411 | MS.gene001931:intron | 60.0% | |
| !! | AACCCTCTGACTCGGGAAGG+GGG | - | chr7.3:72548815-72548834 | None:intergenic | 60.0% |
| !! | CCTAACCCTCTGACTCGGGA+AGG | - | chr7.3:72548818-72548837 | None:intergenic | 60.0% |
| AGCCCCCTTCCCGAGTCAGA+GGG | + | chr7.3:72548810-72548829 | MS.gene001931:intron | 65.0% | |
| CGGCCTCAAAGAGCGAGGCA+TGG | - | chr7.3:72551487-72551506 | None:intergenic | 65.0% | |
| GAGCGAGGCATGGAGCTTCC+AGG | - | chr7.3:72551477-72551496 | None:intergenic | 65.0% | |
| GATCGGCGACACGGTACTGC+AGG | + | chr7.3:72552058-72552077 | MS.gene001931:CDS | 65.0% | |
| GCGGACCAGATGAATCCCGC+AGG | - | chr7.3:72549873-72549892 | None:intergenic | 65.0% | |
| TAGCCCCCTTCCCGAGTCAG+AGG | + | chr7.3:72548809-72548828 | MS.gene001931:intron | 65.0% | |
| CGGCGTGTCAGTGCCGTGTC+TGG | + | chr7.3:72549092-72549111 | MS.gene001931:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 72547941 | 72552202 | 72547941 | ID=MS.gene001931 |
| chr7.3 | mRNA | 72547941 | 72552202 | 72547941 | ID=MS.gene001931.t1;Parent=MS.gene001931 |
| chr7.3 | exon | 72547941 | 72547954 | 72547941 | ID=MS.gene001931.t1.exon1;Parent=MS.gene001931.t1 |
| chr7.3 | CDS | 72547941 | 72547954 | 72547941 | ID=cds.MS.gene001931.t1;Parent=MS.gene001931.t1 |
| chr7.3 | exon | 72548910 | 72548955 | 72548910 | ID=MS.gene001931.t1.exon2;Parent=MS.gene001931.t1 |
| chr7.3 | CDS | 72548910 | 72548955 | 72548910 | ID=cds.MS.gene001931.t1;Parent=MS.gene001931.t1 |
| chr7.3 | exon | 72549192 | 72549306 | 72549192 | ID=MS.gene001931.t1.exon3;Parent=MS.gene001931.t1 |
| chr7.3 | CDS | 72549192 | 72549306 | 72549192 | ID=cds.MS.gene001931.t1;Parent=MS.gene001931.t1 |
| chr7.3 | exon | 72549423 | 72549490 | 72549423 | ID=MS.gene001931.t1.exon4;Parent=MS.gene001931.t1 |
| chr7.3 | CDS | 72549423 | 72549490 | 72549423 | ID=cds.MS.gene001931.t1;Parent=MS.gene001931.t1 |
| chr7.3 | exon | 72550236 | 72550841 | 72550236 | ID=MS.gene001931.t1.exon5;Parent=MS.gene001931.t1 |
| chr7.3 | CDS | 72550236 | 72550841 | 72550236 | ID=cds.MS.gene001931.t1;Parent=MS.gene001931.t1 |
| chr7.3 | exon | 72551349 | 72551453 | 72551349 | ID=MS.gene001931.t1.exon6;Parent=MS.gene001931.t1 |
| chr7.3 | CDS | 72551349 | 72551453 | 72551349 | ID=cds.MS.gene001931.t1;Parent=MS.gene001931.t1 |
| chr7.3 | exon | 72551861 | 72552202 | 72551861 | ID=MS.gene001931.t1.exon7;Parent=MS.gene001931.t1 |
| chr7.3 | CDS | 72551861 | 72552202 | 72551861 | ID=cds.MS.gene001931.t1;Parent=MS.gene001931.t1 |
| Gene Sequence |
| Protein sequence |
