AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene00210

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene00210.t1 MTR_2g034960 95.881 607 23 2 1 606 1 606 0.0 1173
MS.gene00210.t1 MTR_4g121020 62.225 683 173 12 1 601 2 681 0.0 773
MS.gene00210.t1 MTR_4g121020 62.225 683 172 13 1 601 2 680 0.0 768
MS.gene00210.t1 MTR_4g121020 58.435 575 156 11 107 601 6 577 0.0 595
MS.gene00210.t1 MTR_1g032570 59.091 308 117 3 25 325 8 313 5.98e-115 356
MS.gene00210.t1 MTR_3g106220 48.588 354 157 8 26 356 6 357 3.04e-101 321
MS.gene00210.t1 MTR_3g086100 58.462 260 92 3 28 277 13 266 4.45e-95 303
MS.gene00210.t1 MTR_8g079940 57.874 254 105 1 26 277 23 276 3.05e-92 294
MS.gene00210.t1 MTR_1g013170 44.444 378 174 9 24 385 1 358 1.67e-91 291
MS.gene00210.t1 MTR_7g117705 52.174 276 120 4 24 291 1 272 3.06e-87 279
MS.gene00210.t1 MTR_1g032570 57.724 246 95 3 87 325 1 244 4.39e-85 276
MS.gene00210.t1 MTR_2g450070 53.307 257 107 1 24 267 14 270 1.59e-83 275
MS.gene00210.t1 MTR_2g450070 53.307 257 107 1 24 267 14 270 3.51e-83 275
MS.gene00210.t1 MTR_1g013180 55.000 260 113 2 22 277 150 409 2.97e-82 272
MS.gene00210.t1 MTR_4g131570 42.703 370 172 6 17 368 6 353 1.32e-81 268
MS.gene00210.t1 MTR_4g131600 51.737 259 102 3 22 269 14 260 5.19e-81 266
MS.gene00210.t1 MTR_4g131580 44.706 340 149 8 22 346 11 326 1.44e-77 258
MS.gene00210.t1 MTR_3g102590 46.484 256 86 3 25 277 5 212 8.00e-65 213
MS.gene00210.t1 MTR_3g086100 54.500 200 75 3 87 276 1 194 1.13e-63 218
MS.gene00210.t1 MTR_3g102600 43.284 268 92 3 24 291 4 211 4.24e-63 208
MS.gene00210.t1 MTR_3g102590 47.034 236 76 2 25 259 5 192 9.53e-59 195
MS.gene00210.t1 MTR_3g102600 43.882 237 75 2 25 261 5 183 1.26e-56 189
MS.gene00210.t1 MTR_4g021760 43.096 239 112 5 28 266 11 225 3.87e-56 192
MS.gene00210.t1 MTR_4g021855 40.357 280 135 5 28 304 10 260 1.86e-55 190
MS.gene00210.t1 MTR_4g021790 42.917 240 113 4 28 267 10 225 3.44e-55 188
MS.gene00210.t1 MTR_4g021845 41.810 232 111 2 28 259 10 217 1.49e-51 177
MS.gene00210.t1 MTR_0450s0040 37.770 278 138 7 30 298 6 257 8.14e-48 171
MS.gene00210.t1 MTR_3g102600 40.541 222 72 3 70 291 1 162 1.16e-47 165
MS.gene00210.t1 MTR_6g045327 38.843 242 120 6 27 266 13 228 7.62e-45 164
MS.gene00210.t1 MTR_3g102600 40.625 192 56 2 70 261 1 134 6.12e-42 148
MS.gene00210.t1 MTR_8g105600 38.306 248 133 5 28 267 9 244 1.01e-41 159
MS.gene00210.t1 MTR_7g026400 36.792 212 122 1 58 269 17 216 8.12e-41 157
MS.gene00210.t1 MTR_5g055260 37.083 240 100 6 28 267 10 198 1.71e-37 140
MS.gene00210.t1 MTR_1g013160 47.097 155 64 3 90 233 1 148 4.42e-35 130
MS.gene00210.t1 MTR_8g093040 34.167 240 119 5 27 266 13 213 1.45e-28 115
MS.gene00210.t1 MTR_8g032710 30.000 270 165 6 30 277 19 286 1.59e-27 116
MS.gene00210.t1 MTR_4g023980 35.220 159 80 3 78 236 39 174 5.35e-27 108
MS.gene00210.t1 MTR_4g064730 50.909 110 45 3 186 286 99 208 4.15e-24 103
MS.gene00210.t1 MTR_3g092780 36.250 160 96 3 32 186 56 214 4.79e-23 103
MS.gene00210.t1 MTR_3g092780 36.875 160 94 4 32 186 56 213 3.63e-22 101
MS.gene00210.t1 MTR_3g092780 26.341 410 263 11 32 415 56 452 9.95e-22 100
MS.gene00210.t1 MTR_6g016850 36.220 127 78 2 26 150 7 132 1.77e-21 92.4
MS.gene00210.t1 MTR_7g118260 38.971 136 74 2 29 158 11 143 1.95e-21 99.0
MS.gene00210.t1 MTR_4g061360 35.333 150 91 3 6 150 62 210 4.66e-21 98.2
MS.gene00210.t1 MTR_7g089010 57.971 69 29 0 203 271 84 152 5.10e-21 94.4
MS.gene00210.t1 MTR_7g118260 39.844 128 68 2 29 150 11 135 5.76e-21 97.4
MS.gene00210.t1 MTR_3g092780 26.585 410 261 12 32 415 56 451 6.08e-21 97.8
MS.gene00210.t1 MTR_1g067110 39.344 122 71 1 32 150 85 206 1.38e-20 96.7
MS.gene00210.t1 MTR_1g067110 39.344 122 71 1 32 150 85 206 1.54e-20 96.7
MS.gene00210.t1 MTR_3g037390 35.971 139 84 2 19 152 9 147 2.45e-20 95.5
MS.gene00210.t1 MTR_4g108880 35.507 138 84 2 18 152 21 156 7.70e-19 90.9
MS.gene00210.t1 MTR_8g024260 39.344 122 67 3 34 150 38 157 1.22e-18 90.1
MS.gene00210.t1 MTR_5g014040 37.903 124 68 2 145 268 255 369 9.50e-17 84.0
MS.gene00210.t1 MTR_5g014040 37.008 127 76 2 28 153 14 137 1.02e-13 74.3
MS.gene00210.t1 MTR_1g093080 37.692 130 74 4 198 325 199 323 6.41e-16 80.5
MS.gene00210.t1 MTR_5g041350 55.714 70 24 2 206 274 11 74 6.30e-15 77.0
MS.gene00210.t1 MTR_5g014040 36.434 129 68 3 145 268 215 334 6.82e-15 78.2
MS.gene00210.t1 MTR_5g014040 36.434 129 68 3 145 268 255 374 8.57e-15 77.8
MS.gene00210.t1 MTR_5g014040 37.008 127 76 2 28 153 14 137 1.06e-13 74.3
MS.gene00210.t1 MTR_4g098870 47.887 71 37 0 209 279 309 379 1.06e-14 77.8
MS.gene00210.t1 MTR_4g098870 36.220 127 77 2 28 153 14 137 2.36e-13 73.2
MS.gene00210.t1 MTR_4g078810 41.379 87 46 1 209 295 157 238 1.10e-14 77.0
MS.gene00210.t1 MTR_4g098870 47.887 71 37 0 209 279 309 379 1.13e-14 77.4
MS.gene00210.t1 MTR_4g098870 36.220 127 77 2 28 153 14 137 4.19e-13 72.4
MS.gene00210.t1 MTR_4g098870 47.887 71 37 0 209 279 329 399 1.18e-14 77.4
MS.gene00210.t1 MTR_4g098870 36.220 127 77 2 28 153 34 157 2.99e-13 73.2
MS.gene00210.t1 MTR_4g098870 47.887 71 37 0 209 279 329 399 1.19e-14 77.4
MS.gene00210.t1 MTR_4g098870 36.220 127 77 2 28 153 34 157 4.91e-13 72.4
MS.gene00210.t1 MTR_4g098870 47.887 71 37 0 209 279 348 418 1.32e-14 77.4
MS.gene00210.t1 MTR_4g098870 36.220 127 77 2 28 153 53 176 4.41e-13 72.4
MS.gene00210.t1 MTR_6g088950 35.632 87 56 0 67 153 43 129 5.46e-14 71.6
MS.gene00210.t1 MTR_5g017980 50.704 71 35 0 207 277 189 259 6.08e-14 73.6
MS.gene00210.t1 MTR_5g017980 50.704 71 35 0 207 277 190 260 6.14e-14 73.6
MS.gene00210.t1 MTR_4g081710 55.932 59 25 1 206 263 13 71 1.02e-13 73.2
MS.gene00210.t1 MTR_2g090675 53.333 60 28 0 209 268 160 219 1.04e-13 73.9
MS.gene00210.t1 MTR_2g086450 55.932 59 25 1 206 263 41 99 1.10e-13 73.6
MS.gene00210.t1 MTR_4g086835 51.515 66 32 0 207 272 271 336 1.24e-13 73.6
MS.gene00210.t1 MTR_6g032990 51.667 60 28 1 205 263 37 96 2.68e-13 72.4
MS.gene00210.t1 MTR_6g453220 63.462 52 19 0 227 278 380 431 3.68e-13 72.4
MS.gene00210.t1 MTR_5g054300 30.220 182 115 5 151 325 133 309 5.02e-13 71.2
MS.gene00210.t1 MTR_5g017980 50.000 72 35 1 207 277 190 261 7.30e-13 70.5
MS.gene00210.t1 MTR_6g444980 54.237 59 26 1 206 263 31 89 3.22e-12 68.6
MS.gene00210.t1 MTR_4g086835 50.746 67 32 1 207 272 271 337 3.61e-12 68.9
MS.gene00210.t1 MTR_6g444980 54.237 59 26 1 206 263 31 89 3.76e-12 68.6
MS.gene00210.t1 MTR_7g115530 59.259 54 21 1 210 262 218 271 7.19e-12 67.0
MS.gene00210.t1 MTR_1g090670 52.308 65 27 2 203 263 34 98 1.08e-11 66.6
MS.gene00210.t1 MTR_7g115530 59.259 54 21 1 210 262 218 271 1.10e-11 67.0
MS.gene00210.t1 MTR_7g115530 59.259 54 21 1 210 262 218 271 1.63e-11 67.0
MS.gene00210.t1 MTR_7g115530 59.259 54 21 1 210 262 218 271 1.70e-11 66.6
MS.gene00210.t1 MTR_4g113140 36.283 113 66 3 166 273 188 299 2.58e-11 66.6
MS.gene00210.t1 MTR_7g098250 49.206 63 31 1 206 267 258 320 2.69e-11 66.6
MS.gene00210.t1 MTR_1g080330 50.847 59 28 1 205 262 170 228 5.65e-11 64.3
MS.gene00210.t1 MTR_1g080330 50.847 59 28 1 205 262 170 228 7.71e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene00210.t1 AT3G16857 47.059 680 246 20 21 601 26 690 3.31e-175 513
MS.gene00210.t1 AT3G16857 46.423 657 239 19 21 578 26 668 4.92e-164 484
MS.gene00210.t1 AT3G16857 44.724 635 237 20 66 601 1 620 1.56e-144 432
MS.gene00210.t1 AT2G25180 59.924 262 93 3 26 281 11 266 1.03e-95 305
MS.gene00210.t1 AT2G01760 45.263 380 162 8 24 373 3 366 3.23e-95 297
MS.gene00210.t1 AT2G01760 42.157 408 162 9 24 373 3 394 5.46e-89 282
MS.gene00210.t1 AT4G31920 55.000 260 93 2 24 277 9 250 7.09e-87 281
MS.gene00210.t1 AT1G67710 49.702 336 128 9 29 333 8 333 9.28e-86 277
MS.gene00210.t1 AT5G58080 46.875 320 128 7 26 324 12 310 1.54e-78 261
MS.gene00210.t1 AT2G01760 42.271 317 137 9 87 373 1 301 9.61e-62 207
MS.gene00210.t1 AT1G67710 45.683 278 110 9 87 333 1 268 2.89e-56 197
MS.gene00210.t1 AT5G49240 42.915 247 134 3 18 259 28 272 8.10e-54 186
MS.gene00210.t1 AT1G49190 36.364 275 134 6 27 277 29 286 1.08e-45 167
MS.gene00210.t1 AT3G62670 39.407 236 128 5 33 262 42 268 2.08e-45 166
MS.gene00210.t1 AT1G67710 41.473 258 110 9 107 333 12 259 2.15e-40 153
MS.gene00210.t1 AT5G07210 33.955 268 145 6 32 269 16 281 7.85e-39 151
MS.gene00210.t1 AT5G07210 32.971 276 145 7 32 269 16 289 3.25e-36 144
MS.gene00210.t1 AT2G27070 32.103 271 147 7 32 268 16 283 3.55e-33 134
MS.gene00210.t1 AT1G49190 44.800 125 69 0 27 151 29 153 2.61e-29 123
MS.gene00210.t1 AT5G59570 52.083 96 43 1 194 286 125 220 4.13e-25 106
MS.gene00210.t1 AT5G59570 52.083 96 43 1 194 286 125 220 4.13e-25 106
MS.gene00210.t1 AT3G46640 51.064 94 45 1 194 286 128 221 1.76e-23 102
MS.gene00210.t1 AT3G46640 51.064 94 45 1 194 286 128 221 1.76e-23 102
MS.gene00210.t1 AT3G46640 51.064 94 45 1 194 286 128 221 2.53e-23 101
MS.gene00210.t1 AT2G46790 40.650 123 68 2 32 150 37 158 4.71e-23 102
MS.gene00210.t1 AT2G46790 40.650 123 68 2 32 150 37 158 5.22e-23 102
MS.gene00210.t1 AT5G24470 39.200 125 71 2 31 151 49 172 5.12e-21 97.4
MS.gene00210.t1 AT5G60100 39.837 123 69 2 32 150 64 185 6.60e-21 95.9
MS.gene00210.t1 AT5G60100 39.837 123 69 2 32 150 64 185 6.60e-21 95.9
MS.gene00210.t1 AT5G60100 39.837 123 69 2 32 150 64 185 6.60e-21 95.9
MS.gene00210.t1 AT2G40970 60.606 66 26 0 203 268 98 163 8.87e-21 92.4
MS.gene00210.t1 AT5G60100 39.837 123 69 2 32 150 64 185 9.85e-21 96.3
MS.gene00210.t1 AT5G60100 39.837 123 69 2 32 150 64 185 9.85e-21 96.3
MS.gene00210.t1 AT5G60100 39.837 123 69 2 32 150 64 185 9.85e-21 96.3
MS.gene00210.t1 AT5G60100 39.837 123 69 2 32 150 64 185 2.04e-20 95.5
MS.gene00210.t1 AT5G05090 59.091 66 27 0 203 268 74 139 2.49e-20 91.7
MS.gene00210.t1 AT5G61380 38.710 124 73 1 32 152 19 142 4.27e-20 94.7
MS.gene00210.t1 AT3G10760 59.091 66 27 0 203 268 98 163 4.31e-20 92.4
MS.gene00210.t1 AT5G02810 40.164 122 70 1 32 150 78 199 5.61e-20 94.7
MS.gene00210.t1 AT5G44190 50.649 77 38 0 203 279 140 216 8.67e-18 85.9
MS.gene00210.t1 AT5G44190 50.649 77 38 0 203 279 140 216 1.13e-17 85.9
MS.gene00210.t1 AT2G20570 39.823 113 63 2 170 277 108 220 4.60e-16 81.3
MS.gene00210.t1 AT2G20570 38.060 134 77 2 145 277 108 236 2.26e-14 76.3
MS.gene00210.t1 AT3G04030 51.282 78 30 3 206 282 41 111 3.60e-14 75.1
MS.gene00210.t1 AT3G04030 51.282 78 30 3 206 282 41 111 4.06e-14 75.1
MS.gene00210.t1 AT5G18240 50.000 82 37 3 205 285 40 118 5.73e-14 74.7
MS.gene00210.t1 AT5G18240 50.000 82 37 3 205 285 40 118 5.73e-14 74.7
MS.gene00210.t1 AT5G18240 50.000 82 37 3 205 285 40 118 5.87e-14 74.7
MS.gene00210.t1 AT5G18240 50.000 82 37 3 205 285 40 118 6.49e-14 74.3
MS.gene00210.t1 AT5G18240 50.000 82 37 3 205 285 40 118 6.49e-14 74.3
MS.gene00210.t1 AT3G04030 48.052 77 33 2 206 282 41 110 4.75e-13 71.6
MS.gene00210.t1 AT4G18020 36.029 136 78 3 26 154 12 145 5.46e-13 72.0
MS.gene00210.t1 AT4G18020 51.613 62 29 1 207 268 294 354 7.17e-13 71.6
MS.gene00210.t1 AT4G18020 36.029 136 78 3 26 154 12 145 5.46e-13 72.0
MS.gene00210.t1 AT4G18020 51.613 62 29 1 207 268 294 354 7.17e-13 71.6
MS.gene00210.t1 AT4G18020 36.029 136 78 3 26 154 12 145 5.46e-13 72.0
MS.gene00210.t1 AT4G18020 51.613 62 29 1 207 268 294 354 7.17e-13 71.6
MS.gene00210.t1 AT4G18020 36.029 136 78 3 26 154 12 145 5.46e-13 72.0
MS.gene00210.t1 AT4G18020 51.613 62 29 1 207 268 294 354 7.17e-13 71.6
MS.gene00210.t1 AT4G18020 36.029 136 78 3 26 154 12 145 5.46e-13 72.0
MS.gene00210.t1 AT4G18020 51.613 62 29 1 207 268 294 354 7.17e-13 71.6
MS.gene00210.t1 AT4G18020 36.029 136 78 3 26 154 12 145 5.46e-13 72.0
MS.gene00210.t1 AT4G18020 51.613 62 29 1 207 268 294 354 7.17e-13 71.6
MS.gene00210.t1 AT4G18020 36.029 136 78 3 26 154 12 145 6.64e-13 72.0
MS.gene00210.t1 AT4G18020 51.613 62 29 1 207 268 294 354 7.38e-13 71.6
MS.gene00210.t1 AT4G18020 36.029 136 78 3 26 154 12 145 6.64e-13 72.0
MS.gene00210.t1 AT4G18020 51.613 62 29 1 207 268 294 354 7.38e-13 71.6
MS.gene00210.t1 AT4G18020 36.029 136 78 3 26 154 12 145 6.64e-13 72.0
MS.gene00210.t1 AT4G18020 51.613 62 29 1 207 268 294 354 7.38e-13 71.6
MS.gene00210.t1 AT4G18020 36.029 136 78 3 26 154 12 145 6.64e-13 72.0
MS.gene00210.t1 AT4G18020 51.613 62 29 1 207 268 294 354 7.38e-13 71.6
MS.gene00210.t1 AT4G18020 36.029 136 78 3 26 154 12 145 6.64e-13 72.0
MS.gene00210.t1 AT4G18020 51.613 62 29 1 207 268 294 354 7.38e-13 71.6
MS.gene00210.t1 AT1G69580 54.237 59 26 1 206 263 30 88 7.82e-13 70.5
MS.gene00210.t1 AT1G69580 54.237 59 26 1 206 263 30 88 7.96e-13 70.5
MS.gene00210.t1 AT3G24120 52.308 65 27 2 203 263 31 95 3.38e-12 68.2
MS.gene00210.t1 AT3G24120 52.308 65 27 2 203 263 31 95 3.47e-12 68.2
MS.gene00210.t1 AT1G79430 53.333 60 27 1 205 263 29 88 3.92e-12 68.6
MS.gene00210.t1 AT3G25790 38.655 119 61 4 214 330 200 308 7.17e-12 67.8
MS.gene00210.t1 AT4G13640 52.308 65 27 2 203 263 27 91 7.61e-12 67.0
MS.gene00210.t1 AT4G13640 52.308 65 27 2 203 263 27 91 7.85e-12 67.0
MS.gene00210.t1 AT1G49560 36.283 113 64 2 209 313 191 303 2.79e-11 65.9
MS.gene00210.t1 AT3G12730 49.275 69 28 2 202 263 9 77 2.98e-11 64.3
MS.gene00210.t1 AT1G25550 45.070 71 38 1 198 267 197 267 4.02e-11 65.5
MS.gene00210.t1 AT5G29000 45.714 70 35 2 196 262 215 284 5.92e-11 64.3
MS.gene00210.t1 AT1G68670 45.679 81 42 2 194 272 198 278 6.08e-11 64.7
MS.gene00210.t1 AT2G03500 47.059 68 35 1 207 273 230 297 8.01e-11 65.1

Find 138 sgRNAs with CRISPR-Local

Find 221 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAGCTTCATCAACAGTTTA+TGG 0.134096 2.1:-57792737 MS.gene00210:CDS
CTTCAAACCCTTTCAGCTTC+TGG 0.197138 2.1:-57791853 MS.gene00210:CDS
CCTTATCTCCGACCAGTTTC+CGG 0.220153 2.1:-57793789 MS.gene00210:CDS
GTTGTTGTTGTTGAGTTTCA+TGG 0.237423 2.1:+57793856 None:intergenic
GAAGCTACTTCGGGAATTAA+AGG 0.286940 2.1:-57791400 MS.gene00210:CDS
TATGGATGGATTCAAACTTT+TGG 0.295920 2.1:-57793229 MS.gene00210:CDS
AGTACGCCAGAGTCAATATT+TGG 0.308653 2.1:-57791901 MS.gene00210:CDS
CACCAGTCTGCTCAATCCTT+TGG 0.321223 2.1:-57791658 MS.gene00210:CDS
TTGAAGATCAATTTCATTTA+CGG 0.326626 2.1:+57791870 None:intergenic
GAGAACTCAAAACTAAGATT+TGG 0.328580 2.1:-57791775 MS.gene00210:CDS
TTCAGCTTCTGGCCAGTTCT+CGG 0.333161 2.1:-57791842 MS.gene00210:CDS
ACTTCGGGAATTAAAGGATT+AGG 0.335057 2.1:-57791394 MS.gene00210:CDS
AAGAAGATGAAGCAGATGAT+AGG 0.337750 2.1:-57792804 MS.gene00210:CDS
TGCTTTGGCTCAATGTTGAT+AGG 0.342601 2.1:+57791694 None:intergenic
GATAATGAGTTTGACTTTGA+TGG 0.349646 2.1:-57790892 MS.gene00210:CDS
TTGAGCAGACTGGTGAAAAT+TGG 0.352834 2.1:+57791666 None:intergenic
TGAGGTGTTGACCAACATTA+TGG 0.359965 2.1:+57791164 None:intergenic
TGAAAATTGGCAAACTGCTT+TGG 0.368522 2.1:+57791679 None:intergenic
CGACGTGCATATGCCTGATA+TGG 0.368808 2.1:-57793247 MS.gene00210:CDS
TCGAGGCTTTGAAGAATATA+TGG 0.369544 2.1:-57792978 MS.gene00210:CDS
CTTCGGGAATTAAAGGATTA+GGG 0.371380 2.1:-57791393 MS.gene00210:CDS
AAACAATGCTTACTAATAAC+AGG 0.383212 2.1:+57793180 None:intergenic
CTATTGACTGATATTCCATT+TGG 0.387671 2.1:+57791484 None:intergenic
CACGGAGACCCGCCGGAAAC+TGG 0.388410 2.1:+57793777 None:intergenic
TTCGGAAGAGAAAGAATAAC+TGG 0.397525 2.1:-57792945 MS.gene00210:CDS
TCATTTAGCATCTGACCTCT+TGG 0.399993 2.1:+57791562 None:intergenic
CTAGACTTTGCACCGAGAAC+TGG 0.401730 2.1:+57791830 None:intergenic
TAACAGGATCTGTTATAAAC+TGG 0.403457 2.1:+57790850 None:intergenic
AAACGTTGCCAGTCATCTTC+AGG 0.403511 2.1:-57792363 MS.gene00210:intron
AACCTCAGCTCTCTTGCATT+TGG 0.403620 2.1:+57793320 None:intergenic
ATTTGCTAATCCCCAATCAT+TGG 0.406561 2.1:+57791330 None:intergenic
CAAAGAAGCCTCGAGTTGTT+TGG 0.412556 2.1:-57792765 MS.gene00210:CDS
TTTCATGCGGAAGCTACTTC+GGG 0.416515 2.1:-57791409 MS.gene00210:CDS
CCATCAGAAGTCCAATGATT+GGG 0.416956 2.1:-57791341 MS.gene00210:CDS
TATTCAAGTTACTTTGCTGC+TGG 0.418842 2.1:+57791935 None:intergenic
ATGGAAATGATGAATGTTCC+TGG 0.426157 2.1:-57792398 MS.gene00210:CDS
AGTTTGAATCCATCCATATC+AGG 0.428415 2.1:+57793234 None:intergenic
GTTTCATGCGGAAGCTACTT+CGG 0.458202 2.1:-57791410 MS.gene00210:CDS
ATAAGGTTGCCGGAGTTTGA+TGG 0.460200 2.1:+57793806 None:intergenic
TATGGCTGTTGTGAATCAAT+TGG 0.460490 2.1:-57792719 MS.gene00210:CDS
TCCATCAGAAGTCCAATGAT+TGG 0.463174 2.1:-57791342 MS.gene00210:CDS
ATGATTAGAAGAGAGCTAAC+AGG 0.464856 2.1:+57790834 None:intergenic
TGGAAAGATCTGAAGCAATC+TGG 0.465336 2.1:-57792925 MS.gene00210:CDS
TTCTCGCAGCACAAAGGCGT+TGG 0.468445 2.1:-57790922 MS.gene00210:intron
CCGGAAACTGGTCGGAGATA+AGG 0.470882 2.1:+57793789 None:intergenic
CCCAATCATTGGACTTCTGA+TGG 0.470889 2.1:+57791341 None:intergenic
TTGTCGAGTCTGTTGGATAG+AGG 0.472904 2.1:+57791216 None:intergenic
ATGGCTGTTGTGAATCAATT+GGG 0.473696 2.1:-57792718 MS.gene00210:CDS
ATGCAACCTACAGGACCAAA+TGG 0.473881 2.1:-57791499 MS.gene00210:CDS
ACATATGAGCAGCAGTAAAC+CGG 0.474063 2.1:-57791737 MS.gene00210:CDS
CTAGCCAAGCTTCAAGCAGC+AGG 0.477941 2.1:-57791811 MS.gene00210:CDS
GGAACATATTGGATTGGAGA+TGG 0.480393 2.1:-57793208 MS.gene00210:CDS
AGAAGATGAAGCAGATGATA+GGG 0.481453 2.1:-57792803 MS.gene00210:CDS
AGATCAATGTTGCCTTGTAA+AGG 0.489412 2.1:+57791271 None:intergenic
TTCCCTCTTAGATGCACTCC+GGG 0.489466 2.1:-57791460 MS.gene00210:CDS
GTAGGTTGCATTAAAGATGA+TGG 0.494028 2.1:+57791511 None:intergenic
CAACATGCAAATCCTTTACA+AGG 0.495519 2.1:-57791283 MS.gene00210:CDS
TACTCATCTTCAACGAATGA+AGG 0.499328 2.1:-57792853 MS.gene00210:CDS
GATATTCCATTTGGTCCTGT+AGG 0.499380 2.1:+57791493 None:intergenic
GCTTTGGCTCAATGTTGATA+GGG 0.500235 2.1:+57791695 None:intergenic
CAAAACTAAGATTTGGAGAT+GGG 0.507173 2.1:-57791768 MS.gene00210:CDS
CAAGGATCATGAGGCAAGTA+GGG 0.508406 2.1:+57793735 None:intergenic
CTGGTCGGAGATAAGGTTGC+CGG 0.509887 2.1:+57793796 None:intergenic
ATTCAAGTTACTTTGCTGCT+GGG 0.515195 2.1:+57791936 None:intergenic
GTTGAGAAGCATCATATGTC+AGG 0.515544 2.1:+57791302 None:intergenic
CATGAGCGTATTTCTGAACC+AGG 0.515894 2.1:-57791038 MS.gene00210:intron
GATTGGGGATTAGCAAATAC+AGG 0.520281 2.1:-57791325 MS.gene00210:CDS
TTCAAAGCCTCGATTCGCAC+AGG 0.523205 2.1:+57792988 None:intergenic
ATATATGGCAGCATGTGGTT+CGG 0.524503 2.1:-57792963 MS.gene00210:CDS
TCAAGGATCATGAGGCAAGT+AGG 0.525643 2.1:+57793734 None:intergenic
ATATCCAGTAGCAGTACAAA+AGG 0.527621 2.1:-57791436 MS.gene00210:CDS
TGACTGACTTGATCAGAGAA+GGG 0.534175 2.1:+57791070 None:intergenic
AAACCGGTGAACTTTCTTCA+CGG 0.535622 2.1:-57791721 MS.gene00210:CDS
ATACAAATTCTCATGCTACA+AGG 0.536556 2.1:-57791537 MS.gene00210:CDS
TCAAAACTAAGATTTGGAGA+TGG 0.536886 2.1:-57791769 MS.gene00210:CDS
TTGACTGACTTGATCAGAGA+AGG 0.537467 2.1:+57791069 None:intergenic
TTGTATCTTCGAAGGTTGAG+TGG 0.537963 2.1:-57791964 MS.gene00210:CDS
TGTCGACAAAAGTTGTATTG+AGG 0.539424 2.1:+57791146 None:intergenic
GAACTGGCCAGAAGCTGAAA+GGG 0.541735 2.1:+57791846 None:intergenic
ATCTCCGACCAGTTTCCGGC+GGG 0.544362 2.1:-57793785 MS.gene00210:CDS
TCGCATATTTGCGCTGCCAA+AGG 0.548078 2.1:+57791642 None:intergenic
AATACCGTTTGTATCTTCGA+AGG 0.548651 2.1:-57791972 MS.gene00210:CDS
AGAACTGGCCAGAAGCTGAA+AGG 0.554761 2.1:+57791845 None:intergenic
TCATCTTTAATGCAACCTAC+AGG 0.556863 2.1:-57791508 MS.gene00210:CDS
TTAGTGATGTCGGCTGATGA+TGG 0.559693 2.1:-57793066 MS.gene00210:intron
ATACCCGGAGTGCATCTAAG+AGG 0.561462 2.1:+57791457 None:intergenic
ATATCGTACCTGAAGATGAC+TGG 0.562314 2.1:+57792355 None:intergenic
AAGCCCTTGGTTGATGCAGA+TGG 0.564484 2.1:-57791596 MS.gene00210:CDS
CTCTGATCAAGTCAGTCAAG+AGG 0.573459 2.1:-57791065 MS.gene00210:CDS
TTTGTCGACAATTCATTAAG+GGG 0.574449 2.1:-57791133 MS.gene00210:CDS
TTGATCTCAATGTTTGTACT+CGG 0.576687 2.1:+57791094 None:intergenic
ATTCCGTGAAGAAAGTTCAC+CGG 0.576781 2.1:+57791718 None:intergenic
GTTCCTCCAAATATTGACTC+TGG 0.578483 2.1:+57791895 None:intergenic
TGCCAAAGGATTGAGCAGAC+TGG 0.579512 2.1:+57791656 None:intergenic
TTTCCCTCTTAGATGCACTC+CGG 0.583189 2.1:-57791461 MS.gene00210:CDS
TGACTCTGGCGTACTCATGA+AGG 0.583909 2.1:+57791909 None:intergenic
GCAAGAGCTCAAAGAAGAGG+AGG 0.587165 2.1:-57792831 MS.gene00210:CDS
GACTGACTTGATCAGAGAAG+GGG 0.587939 2.1:+57791071 None:intergenic
ACAAGTACACGGAGACCCGC+CGG 0.589774 2.1:+57793770 None:intergenic
CAAGGTGATCACCATAATGT+TGG 0.591086 2.1:-57791175 MS.gene00210:CDS
AAGTCCTGCTGCTTGAAGCT+TGG 0.592461 2.1:+57791807 None:intergenic
AGATGAGTAATTAGCATCAG+TGG 0.594629 2.1:+57792867 None:intergenic
CTGCTGCAAAGAGAAGCCCT+TGG 0.595593 2.1:-57791609 MS.gene00210:CDS
TGGTGAAGTTGAGGTTGACA+TGG 0.599570 2.1:+57793826 None:intergenic
AAGATCAATTTCATTTACGG+AGG 0.607064 2.1:+57791873 None:intergenic
GAGCCATCTGCATCAACCAA+GGG 0.609724 2.1:+57791593 None:intergenic
TGAGCCATCTGCATCAACCA+AGG 0.610874 2.1:+57791592 None:intergenic
AATAGAGATGGTATGAGTCA+AGG 0.612883 2.1:-57791193 MS.gene00210:CDS
TCAACCTTCGAAGATACAAA+CGG 0.613662 2.1:+57791968 None:intergenic
AATCAAACCTGTGCGAATCG+AGG 0.614923 2.1:-57792995 MS.gene00210:CDS
TCAACTTCACCATCAAACTC+CGG 0.617812 2.1:-57793815 MS.gene00210:CDS
TACCCGGAGTGCATCTAAGA+GGG 0.617885 2.1:+57791458 None:intergenic
GTGCATATGCCTGATATGGA+TGG 0.621582 2.1:-57793243 MS.gene00210:CDS
CAGACTCGACAAAATAGAGA+TGG 0.622886 2.1:-57791205 MS.gene00210:CDS
CATCAGAAGTCCAATGATTG+GGG 0.623338 2.1:-57791340 MS.gene00210:CDS
AAGATTGAAGACCTTCATAG+AGG 0.625198 2.1:+57793693 None:intergenic
GCATTCTTTCAAGGATCATG+AGG 0.625199 2.1:+57793726 None:intergenic
TGGAAATGATGAATGTTCCT+GGG 0.628797 2.1:-57792397 MS.gene00210:CDS
AAAGATCTGAAGCAATCTGG+TGG 0.628824 2.1:-57792922 MS.gene00210:CDS
TATCTCCGACCAGTTTCCGG+CGG 0.629363 2.1:-57793786 MS.gene00210:CDS
GAAGAATATATGGCAGCATG+TGG 0.629609 2.1:-57792968 MS.gene00210:CDS
TACAAAAGGCGTGTTTCATG+CGG 0.631885 2.1:-57791422 MS.gene00210:CDS
TTCGGGAATTAAAGGATTAG+GGG 0.632056 2.1:-57791392 MS.gene00210:CDS
TTGTATTTCTCGCAGCACAA+AGG 0.634173 2.1:-57790928 MS.gene00210:intron
CCACGATGGCCTAAAATCGA+CGG 0.634519 2.1:+57791244 None:intergenic
AAGGCAAGAGCTCAAAGAAG+AGG 0.635070 2.1:-57792834 MS.gene00210:CDS
TCGGGAATTAAAGGATTAGG+GGG 0.636049 2.1:-57791391 MS.gene00210:CDS
ACGCCAGAGTCAATATTTGG+AGG 0.638077 2.1:-57791898 MS.gene00210:CDS
TCAATAGACCAAACAACTCG+AGG 0.639848 2.1:+57792757 None:intergenic
GGAGTTTGATGGTGAAGTTG+AGG 0.651951 2.1:+57793817 None:intergenic
CATCATCAACAACAAGTACA+CGG 0.653506 2.1:+57793759 None:intergenic
GAGACCCGCCGGAAACTGGT+CGG 0.661705 2.1:+57793781 None:intergenic
CAAGAGCTCAAAGAAGAGGA+GGG 0.663100 2.1:-57792830 MS.gene00210:CDS
TACCAAATGCAAGAGAGCTG+AGG 0.664673 2.1:-57793322 MS.gene00210:CDS
GTACTGCTACTGGATATACC+CGG 0.685345 2.1:+57791442 None:intergenic
ATGGCTCAGTCTCAACCAAG+AGG 0.702081 2.1:-57791577 MS.gene00210:CDS
GTAATGAAAGGTGTGACACA+CGG 0.719143 2.1:-57793033 MS.gene00210:CDS
ATAAACTGGAATGTTGTCTG+CGG 0.732217 2.1:+57790864 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATCTGAACTAAAAATAAAAA+TGG + chr2.1:57791170-57791189 None:intergenic 15.0%
!! TAAGGAAACATAAATATTTA+GGG + chr2.1:57793712-57793731 None:intergenic 15.0%
!! TCTGAACTAAAAATAAAAAT+GGG + chr2.1:57791169-57791188 None:intergenic 15.0%
!!! AATAAATGATTTGTCTATAA+AGG + chr2.1:57793740-57793759 None:intergenic 15.0%
!!! AGAAATATTTAAGATTCTAT+GGG + chr2.1:57792187-57792206 None:intergenic 15.0%
!! AAAAAACTCAATCAAACAAA+AGG + chr2.1:57791138-57791157 None:intergenic 20.0%
!! AAAAACTCAATCAAACAAAA+GGG + chr2.1:57791137-57791156 None:intergenic 20.0%
!! CAAGGATATAACATAATTAA+GGG + chr2.1:57792027-57792046 None:intergenic 20.0%
!! CTTAACAATAACAAAAATAG+AGG + chr2.1:57792392-57792411 None:intergenic 20.0%
!! CTTCTAAACTAACTTATTAT+AGG + chr2.1:57792439-57792458 None:intergenic 20.0%
!! GTAAGGAAACATAAATATTT+AGG + chr2.1:57793713-57793732 None:intergenic 20.0%
!! TTGAAGATCAATTTCATTTA+CGG + chr2.1:57792836-57792855 None:intergenic 20.0%
!!! AAATATTTAAGATTCTATGG+GGG + chr2.1:57792185-57792204 None:intergenic 20.0%
!!! ATAATAAGTTAGTTTAGAAG+TGG - chr2.1:57792439-57792458 MS.gene00210:intron 20.0%
!!! ATCATTTCCATAATCTTTTT+AGG + chr2.1:57792296-57792315 None:intergenic 20.0%
!!! CAGAAATATTTAAGATTCTA+TGG + chr2.1:57792188-57792207 None:intergenic 20.0%
!!! GAAATATTTAAGATTCTATG+GGG + chr2.1:57792186-57792205 None:intergenic 20.0%
!!! GCTTTTGATATGATTTAATA+TGG - chr2.1:57791222-57791241 MS.gene00210:CDS 20.0%
!!! TAAGTGTTTTTTTCAACTAT+TGG - chr2.1:57791258-57791277 MS.gene00210:CDS 20.0%
!!! TTATTTTTAGTTCAGATTCT+TGG - chr2.1:57791173-57791192 MS.gene00210:CDS 20.0%
!!! TTTTAACACTAATTCATGAT+GGG + chr2.1:57791055-57791074 None:intergenic 20.0%
!!! TTTTTAACACTAATTCATGA+TGG + chr2.1:57791056-57791075 None:intergenic 20.0%
! AAACAATGCTTACTAATAAC+AGG + chr2.1:57791526-57791545 None:intergenic 25.0%
! AAATTGATATTGATATGCAG+AGG - chr2.1:57792265-57792284 MS.gene00210:intron 25.0%
! AGCATAATTCAAAAGAAAGA+TGG + chr2.1:57791205-57791224 None:intergenic 25.0%
! ATATCTCGGAAAAACTTTAA+GGG + chr2.1:57792113-57792132 None:intergenic 25.0%
! CTTCTTAGAGAGAATAAAAA+CGG - chr2.1:57791415-57791434 MS.gene00210:CDS 25.0%
! GCAAGGATATAACATAATTA+AGG + chr2.1:57792028-57792047 None:intergenic 25.0%
! TATATCTCGGAAAAACTTTA+AGG + chr2.1:57792114-57792133 None:intergenic 25.0%
! TTCTTAGAGAGAATAAAAAC+GGG - chr2.1:57791416-57791435 MS.gene00210:CDS 25.0%
! TTGTCTATAAAGGAAAAGTA+AGG + chr2.1:57793730-57793749 None:intergenic 25.0%
!! AAAGTCTCAAACTTTAACTT+TGG + chr2.1:57791292-57791311 None:intergenic 25.0%
!! TTTTGTCGACAATTCATTAA+GGG - chr2.1:57793569-57793588 MS.gene00210:intron 25.0%
!!! TTCAAACTTTTGGAACATAT+TGG - chr2.1:57791484-57791503 MS.gene00210:CDS 25.0%
AACAATCTTGTAGAATCACA+AGG + chr2.1:57792139-57792158 None:intergenic 30.0%
AAGATCAATTTCATTTACGG+AGG + chr2.1:57792833-57792852 None:intergenic 30.0%
ACAAGCAAAACAGAATCAAA+TGG + chr2.1:57791342-57791361 None:intergenic 30.0%
ATACAAATTCTCATGCTACA+AGG - chr2.1:57793166-57793185 MS.gene00210:intron 30.0%
CAAAACTAAGATTTGGAGAT+GGG - chr2.1:57792935-57792954 MS.gene00210:CDS 30.0%
GAATCACAAGGATTATATCT+CGG + chr2.1:57792127-57792146 None:intergenic 30.0%
GAGAACTCAAAACTAAGATT+TGG - chr2.1:57792928-57792947 MS.gene00210:CDS 30.0%
TAACAGGATCTGTTATAAAC+TGG + chr2.1:57793856-57793875 None:intergenic 30.0%
TCAAAACTAAGATTTGGAGA+TGG - chr2.1:57792934-57792953 MS.gene00210:CDS 30.0%
TGTAACTCTTAACATTCAAG+TGG + chr2.1:57792647-57792666 None:intergenic 30.0%
TTGATCTCAATGTTTGTACT+CGG + chr2.1:57793612-57793631 None:intergenic 30.0%
TTTGTCGACAATTCATTAAG+GGG - chr2.1:57793570-57793589 MS.gene00210:intron 30.0%
! AATATTTAGGGTCAACAGAA+AGG + chr2.1:57793700-57793719 None:intergenic 30.0%
! ATAAGTTAGTTTAGAAGTGG+TGG - chr2.1:57792442-57792461 MS.gene00210:intron 30.0%
! CTATTGACTGATATTCCATT+TGG + chr2.1:57793222-57793241 None:intergenic 30.0%
! CTTTTGTCGACAATTCATTA+AGG - chr2.1:57793568-57793587 MS.gene00210:intron 30.0%
! GATAATGAGTTTGACTTTGA+TGG - chr2.1:57793811-57793830 MS.gene00210:CDS 30.0%
! TGAAAGAGAACATTTTTGCA+AGG + chr2.1:57792045-57792064 None:intergenic 30.0%
! TTGATTCTGTTTTGCTTGTT+GGG - chr2.1:57791343-57791362 MS.gene00210:CDS 30.0%
! TTTGATTCTGTTTTGCTTGT+TGG - chr2.1:57791342-57791361 MS.gene00210:CDS 30.0%
!! CGTACAAACTGATTTTGTAA+GGG - chr2.1:57792476-57792495 MS.gene00210:intron 30.0%
!! TATGGATGGATTCAAACTTT+TGG - chr2.1:57791474-57791493 MS.gene00210:CDS 30.0%
!! TCATCTTTGTTTGTTTTCCA+CGG - chr2.1:57792062-57792081 MS.gene00210:intron 30.0%
!! TCGTACAAACTGATTTTGTA+AGG - chr2.1:57792475-57792494 MS.gene00210:intron 30.0%
!!! AATCTTAGTTTTGAGTTCTC+AGG + chr2.1:57792928-57792947 None:intergenic 30.0%
!!! ACTTTTGGAACATATTGGAT+TGG - chr2.1:57791489-57791508 MS.gene00210:CDS 30.0%
!!! TGAATGTGTTTTAGTGATGT+CGG - chr2.1:57791627-57791646 MS.gene00210:CDS 30.0%
AAGAAGATGAAGCAGATGAT+AGG - chr2.1:57791899-57791918 MS.gene00210:CDS 35.0%
AAGATTGAAGACCTTCATAG+AGG + chr2.1:57791013-57791032 None:intergenic 35.0%
AATACCGTTTGTATCTTCGA+AGG - chr2.1:57792731-57792750 MS.gene00210:CDS 35.0%
AATAGAGATGGTATGAGTCA+AGG - chr2.1:57793510-57793529 MS.gene00210:intron 35.0%
ACTTCGGGAATTAAAGGATT+AGG - chr2.1:57793309-57793328 MS.gene00210:CDS 35.0%
AGAAGATGAAGCAGATGATA+GGG - chr2.1:57791900-57791919 MS.gene00210:CDS 35.0%
AGAGCCTATATAAGATCTCA+TGG - chr2.1:57792527-57792546 MS.gene00210:intron 35.0%
AGATCAATGTTGCCTTGTAA+AGG + chr2.1:57793435-57793454 None:intergenic 35.0%
AGATGAGTAATTAGCATCAG+TGG + chr2.1:57791839-57791858 None:intergenic 35.0%
AGTTTGAATCCATCCATATC+AGG + chr2.1:57791472-57791491 None:intergenic 35.0%
ATAAACTGGAATGTTGTCTG+CGG + chr2.1:57793842-57793861 None:intergenic 35.0%
ATATCCAGTAGCAGTACAAA+AGG - chr2.1:57793267-57793286 MS.gene00210:CDS 35.0%
ATGGAAATGATGAATGTTCC+TGG - chr2.1:57792305-57792324 MS.gene00210:intron 35.0%
ATGGCTGTTGTGAATCAATT+GGG - chr2.1:57791985-57792004 MS.gene00210:intron 35.0%
CAAAATCAGTTTGTACGATG+AGG + chr2.1:57792473-57792492 None:intergenic 35.0%
CAACATGCAAATCCTTTACA+AGG - chr2.1:57793420-57793439 MS.gene00210:intron 35.0%
CATCATCAACAACAAGTACA+CGG + chr2.1:57790947-57790966 None:intergenic 35.0%
CTTCGGGAATTAAAGGATTA+GGG - chr2.1:57793310-57793329 MS.gene00210:CDS 35.0%
GAGCCTATATAAGATCTCAT+GGG - chr2.1:57792528-57792547 MS.gene00210:intron 35.0%
GGCTGTTCCTAAAAAGATTA+TGG - chr2.1:57792286-57792305 MS.gene00210:intron 35.0%
GTAGGTTGCATTAAAGATGA+TGG + chr2.1:57793195-57793214 None:intergenic 35.0%
TAAGATTCTATGGGGGAAAA+GGG + chr2.1:57792178-57792197 None:intergenic 35.0%
TACTCATCTTCAACGAATGA+AGG - chr2.1:57791850-57791869 MS.gene00210:CDS 35.0%
TATGGCTGTTGTGAATCAAT+TGG - chr2.1:57791984-57792003 MS.gene00210:intron 35.0%
TCAACCTTCGAAGATACAAA+CGG + chr2.1:57792738-57792757 None:intergenic 35.0%
TCATCTTTAATGCAACCTAC+AGG - chr2.1:57793195-57793214 MS.gene00210:CDS 35.0%
TGAAAATTGGCAAACTGCTT+TGG + chr2.1:57793027-57793046 None:intergenic 35.0%
TGAGCTTCATCAACAGTTTA+TGG - chr2.1:57791966-57791985 MS.gene00210:CDS 35.0%
TGGAAATGATGAATGTTCCT+GGG - chr2.1:57792306-57792325 MS.gene00210:intron 35.0%
TGTCGACAAAAGTTGTATTG+AGG + chr2.1:57793560-57793579 None:intergenic 35.0%
TTAAGATTCTATGGGGGAAA+AGG + chr2.1:57792179-57792198 None:intergenic 35.0%
TTCGGAAGAGAAAGAATAAC+TGG - chr2.1:57791758-57791777 MS.gene00210:CDS 35.0%
TTCGGGAATTAAAGGATTAG+GGG - chr2.1:57793311-57793330 MS.gene00210:CDS 35.0%
! AAAAACGGAGCATTCTTTCA+AGG + chr2.1:57790989-57791008 None:intergenic 35.0%
! ATTCAAGTTACTTTGCTGCT+GGG + chr2.1:57792770-57792789 None:intergenic 35.0%
! ATTTGCTAATCCCCAATCAT+TGG + chr2.1:57793376-57793395 None:intergenic 35.0%
! GGAAAAAACGTGGTAATGAA+AGG - chr2.1:57791658-57791677 MS.gene00210:CDS 35.0%
! TATTCAAGTTACTTTGCTGC+TGG + chr2.1:57792771-57792790 None:intergenic 35.0%
! TCGGAAAAACTTTAAGGGAA+TGG + chr2.1:57792108-57792127 None:intergenic 35.0%
!! TCGAGGCTTTGAAGAATATA+TGG - chr2.1:57791725-57791744 MS.gene00210:CDS 35.0%
AAACCGGTGAACTTTCTTCA+CGG - chr2.1:57792982-57793001 MS.gene00210:CDS 40.0%
ACATATGAGCAGCAGTAAAC+CGG - chr2.1:57792966-57792985 MS.gene00210:CDS 40.0%
AGGTCATATCTCATCTAACG+TGG + chr2.1:57792419-57792438 None:intergenic 40.0%
AGTACGCCAGAGTCAATATT+TGG - chr2.1:57792802-57792821 MS.gene00210:CDS 40.0%
ATATATGGCAGCATGTGGTT+CGG - chr2.1:57791740-57791759 MS.gene00210:CDS 40.0%
ATATCGTACCTGAAGATGAC+TGG + chr2.1:57792351-57792370 None:intergenic 40.0%
ATGTCCACTTATCAGTGTGA+GGG - chr2.1:57792600-57792619 MS.gene00210:intron 40.0%
ATTCCGTGAAGAAAGTTCAC+CGG + chr2.1:57792988-57793007 None:intergenic 40.0%
CAAGGTGATCACCATAATGT+TGG - chr2.1:57793528-57793547 MS.gene00210:intron 40.0%
CAGACTCGACAAAATAGAGA+TGG - chr2.1:57793498-57793517 MS.gene00210:intron 40.0%
CATCAGAAGTCCAATGATTG+GGG - chr2.1:57793363-57793382 MS.gene00210:intron 40.0%
CCATCAGAAGTCCAATGATT+GGG - chr2.1:57793362-57793381 MS.gene00210:intron 40.0%
GAAGAATATATGGCAGCATG+TGG - chr2.1:57791735-57791754 MS.gene00210:CDS 40.0%
GAAGCTACTTCGGGAATTAA+AGG - chr2.1:57793303-57793322 MS.gene00210:CDS 40.0%
GACCTTCATAGAGGCAAAAA+CGG + chr2.1:57791004-57791023 None:intergenic 40.0%
GATATTCCATTTGGTCCTGT+AGG + chr2.1:57793213-57793232 None:intergenic 40.0%
GCATTCTTTCAAGGATCATG+AGG + chr2.1:57790980-57790999 None:intergenic 40.0%
GGTCATATCTCATCTAACGT+GGG + chr2.1:57792418-57792437 None:intergenic 40.0%
TCAACTTCACCATCAAACTC+CGG - chr2.1:57790888-57790907 MS.gene00210:CDS 40.0%
TCAATAGACCAAACAACTCG+AGG + chr2.1:57791949-57791968 None:intergenic 40.0%
TCATTTAGCATCTGACCTCT+TGG + chr2.1:57793144-57793163 None:intergenic 40.0%
TCCATCAGAAGTCCAATGAT+TGG - chr2.1:57793361-57793380 MS.gene00210:intron 40.0%
TCGGGAATTAAAGGATTAGG+GGG - chr2.1:57793312-57793331 MS.gene00210:CDS 40.0%
TGGCCCATGAGATCTTATAT+AGG + chr2.1:57792534-57792553 None:intergenic 40.0%
TTGAGCAGACTGGTGAAAAT+TGG + chr2.1:57793040-57793059 None:intergenic 40.0%
TTGTATCTTCGAAGGTTGAG+TGG - chr2.1:57792739-57792758 MS.gene00210:CDS 40.0%
TTGTATTTCTCGCAGCACAA+AGG - chr2.1:57793775-57793794 MS.gene00210:CDS 40.0%
! AAAGATCTGAAGCAATCTGG+TGG - chr2.1:57791781-57791800 MS.gene00210:CDS 40.0%
! CTCTATTTTGTCGAGTCTGT+TGG + chr2.1:57793497-57793516 None:intergenic 40.0%
! GATTGGGGATTAGCAAATAC+AGG - chr2.1:57793378-57793397 MS.gene00210:intron 40.0%
! GCTTTGGCTCAATGTTGATA+GGG + chr2.1:57793011-57793030 None:intergenic 40.0%
! GGAACATATTGGATTGGAGA+TGG - chr2.1:57791495-57791514 MS.gene00210:CDS 40.0%
! GTAATGAAAGGTGTGACACA+CGG - chr2.1:57791670-57791689 MS.gene00210:CDS 40.0%
! TACAAAAGGCGTGTTTCATG+CGG - chr2.1:57793281-57793300 MS.gene00210:CDS 40.0%
! TGCTTTGGCTCAATGTTGAT+AGG + chr2.1:57793012-57793031 None:intergenic 40.0%
! TGGAAAGATCTGAAGCAATC+TGG - chr2.1:57791778-57791797 MS.gene00210:CDS 40.0%
!! GTTCCTCCAAATATTGACTC+TGG + chr2.1:57792811-57792830 None:intergenic 40.0%
!! GTTGAGAAGCATCATATGTC+AGG + chr2.1:57793404-57793423 None:intergenic 40.0%
!! TGACTGACTTGATCAGAGAA+GGG + chr2.1:57793636-57793655 None:intergenic 40.0%
!! TGAGGTGTTGACCAACATTA+TGG + chr2.1:57793542-57793561 None:intergenic 40.0%
!! TTGACTGACTTGATCAGAGA+AGG + chr2.1:57793637-57793656 None:intergenic 40.0%
AAACGTTGCCAGTCATCTTC+AGG - chr2.1:57792340-57792359 MS.gene00210:intron 45.0%
AACCTCAGCTCTCTTGCATT+TGG + chr2.1:57791386-57791405 None:intergenic 45.0%
AAGGCAAGAGCTCAAAGAAG+AGG - chr2.1:57791869-57791888 MS.gene00210:CDS 45.0%
AATCAAACCTGTGCGAATCG+AGG - chr2.1:57791708-57791727 MS.gene00210:CDS 45.0%
ACAGAAAGGAAGAACCAACC+TGG + chr2.1:57793686-57793705 None:intergenic 45.0%
ACGCCAGAGTCAATATTTGG+AGG - chr2.1:57792805-57792824 MS.gene00210:CDS 45.0%
ATAAGGTTGCCGGAGTTTGA+TGG + chr2.1:57790900-57790919 None:intergenic 45.0%
ATGCAACCTACAGGACCAAA+TGG - chr2.1:57793204-57793223 MS.gene00210:CDS 45.0%
CAAGAGCTCAAAGAAGAGGA+GGG - chr2.1:57791873-57791892 MS.gene00210:CDS 45.0%
CAAGGATCATGAGGCAAGTA+GGG + chr2.1:57790971-57790990 None:intergenic 45.0%
CACACTGATAAGTGGACATC+TGG + chr2.1:57792599-57792618 None:intergenic 45.0%
CCCAATCATTGGACTTCTGA+TGG + chr2.1:57793365-57793384 None:intergenic 45.0%
CTCTGATCAAGTCAGTCAAG+AGG - chr2.1:57793638-57793657 MS.gene00210:intron 45.0%
CTTCAAACCCTTTCAGCTTC+TGG - chr2.1:57792850-57792869 MS.gene00210:CDS 45.0%
GATGTCCACTTATCAGTGTG+AGG - chr2.1:57792599-57792618 MS.gene00210:intron 45.0%
GGATAGAGGAAAAACCACGA+TGG + chr2.1:57793476-57793495 None:intergenic 45.0%
GTACGTTAGATGAGATACCG+TGG + chr2.1:57792082-57792101 None:intergenic 45.0%
GTACTGCTACTGGATATACC+CGG + chr2.1:57793264-57793283 None:intergenic 45.0%
GTGCATATGCCTGATATGGA+TGG - chr2.1:57791460-57791479 MS.gene00210:CDS 45.0%
GTTTCATGCGGAAGCTACTT+CGG - chr2.1:57793293-57793312 MS.gene00210:CDS 45.0%
TACCAAATGCAAGAGAGCTG+AGG - chr2.1:57791381-57791400 MS.gene00210:CDS 45.0%
TATAAGATCTCATGGGCCAC+TGG - chr2.1:57792535-57792554 MS.gene00210:intron 45.0%
TCAAGGATCATGAGGCAAGT+AGG + chr2.1:57790972-57790991 None:intergenic 45.0%
TGGTGAAGTTGAGGTTGACA+TGG + chr2.1:57790880-57790899 None:intergenic 45.0%
TGTCCACTTATCAGTGTGAG+GGG - chr2.1:57792601-57792620 MS.gene00210:intron 45.0%
TTGTCGAGTCTGTTGGATAG+AGG + chr2.1:57793490-57793509 None:intergenic 45.0%
TTTCATGCGGAAGCTACTTC+GGG - chr2.1:57793294-57793313 MS.gene00210:CDS 45.0%
TTTCCCTCTTAGATGCACTC+CGG - chr2.1:57793242-57793261 MS.gene00210:CDS 45.0%
! AGCGTATTTCTGAACCAGGT+TGG - chr2.1:57793669-57793688 MS.gene00210:intron 45.0%
! CAAAGAAGCCTCGAGTTGTT+TGG - chr2.1:57791938-57791957 MS.gene00210:CDS 45.0%
! CATGAGCGTATTTCTGAACC+AGG - chr2.1:57793665-57793684 MS.gene00210:intron 45.0%
! TTAGTGATGTCGGCTGATGA+TGG - chr2.1:57791637-57791656 MS.gene00210:CDS 45.0%
!! CTCCGTTTTTGCCTCTATGA+AGG - chr2.1:57790999-57791018 MS.gene00210:intron 45.0%
!! GACTGACTTGATCAGAGAAG+GGG + chr2.1:57793635-57793654 None:intergenic 45.0%
!! GGAGTTTGATGGTGAAGTTG+AGG + chr2.1:57790889-57790908 None:intergenic 45.0%
!! GGCTGATGATGGAAAAAACG+TGG - chr2.1:57791648-57791667 MS.gene00210:CDS 45.0%
!!! TTTTTTTTTTTTTATTGATT+TGG - chr2.1:57791545-57791564 MS.gene00210:CDS 5.0%
AGAACTGGCCAGAAGCTGAA+AGG + chr2.1:57792861-57792880 None:intergenic 50.0%
ATACCCGGAGTGCATCTAAG+AGG + chr2.1:57793249-57793268 None:intergenic 50.0%
ATGGCTCAGTCTCAACCAAG+AGG - chr2.1:57793126-57793145 MS.gene00210:intron 50.0%
CACCAGTCTGCTCAATCCTT+TGG - chr2.1:57793045-57793064 MS.gene00210:CDS 50.0%
CCACGATGGCCTAAAATCGA+CGG + chr2.1:57793462-57793481 None:intergenic 50.0%
CCTTATCTCCGACCAGTTTC+CGG - chr2.1:57790914-57790933 MS.gene00210:CDS 50.0%
CGACGTGCATATGCCTGATA+TGG - chr2.1:57791456-57791475 MS.gene00210:CDS 50.0%
CTAGACTTTGCACCGAGAAC+TGG + chr2.1:57792876-57792895 None:intergenic 50.0%
GAACTGGCCAGAAGCTGAAA+GGG + chr2.1:57792860-57792879 None:intergenic 50.0%
GAGCCATCTGCATCAACCAA+GGG + chr2.1:57793113-57793132 None:intergenic 50.0%
GCAAGAGCTCAAAGAAGAGG+AGG - chr2.1:57791872-57791891 MS.gene00210:CDS 50.0%
GGCTATCAAGTCACCGCTAT+TGG - chr2.1:57792556-57792575 MS.gene00210:intron 50.0%
GTCCACTTATCAGTGTGAGG+GGG - chr2.1:57792602-57792621 MS.gene00210:intron 50.0%
TACCCGGAGTGCATCTAAGA+GGG + chr2.1:57793248-57793267 None:intergenic 50.0%
TCGCATATTTGCGCTGCCAA+AGG + chr2.1:57793064-57793083 None:intergenic 50.0%
TGACTCTGGCGTACTCATGA+AGG + chr2.1:57792797-57792816 None:intergenic 50.0%
TGAGCCATCTGCATCAACCA+AGG + chr2.1:57793114-57793133 None:intergenic 50.0%
TGCCAAAGGATTGAGCAGAC+TGG + chr2.1:57793050-57793069 None:intergenic 50.0%
TTCAGCTTCTGGCCAGTTCT+CGG - chr2.1:57792861-57792880 MS.gene00210:CDS 50.0%
TTCCCTCTTAGATGCACTCC+GGG - chr2.1:57793243-57793262 MS.gene00210:CDS 50.0%
! AAGCCCTTGGTTGATGCAGA+TGG - chr2.1:57793107-57793126 MS.gene00210:intron 50.0%
! AAGTCCTGCTGCTTGAAGCT+TGG + chr2.1:57792899-57792918 None:intergenic 50.0%
! ACGTTTTCTCTAGTGAGCCC+AGG + chr2.1:57792326-57792345 None:intergenic 50.0%
! CACGCCTTTTGTACTGCTAC+TGG + chr2.1:57793274-57793293 None:intergenic 50.0%
! TTCAAAGCCTCGATTCGCAC+AGG + chr2.1:57791718-57791737 None:intergenic 50.0%
!!! GATCTCTCGCCGTCGATTTT+AGG - chr2.1:57793450-57793469 MS.gene00210:intron 50.0%
CACCCCCTCACACTGATAAG+TGG + chr2.1:57792607-57792626 None:intergenic 55.0%
CCGGAAACTGGTCGGAGATA+AGG + chr2.1:57790917-57790936 None:intergenic 55.0%
CTAGCCAAGCTTCAAGCAGC+AGG - chr2.1:57792892-57792911 MS.gene00210:CDS 55.0%
CTGCTGCAAAGAGAAGCCCT+TGG - chr2.1:57793094-57793113 MS.gene00210:intron 55.0%
CTGGTCGGAGATAAGGTTGC+CGG + chr2.1:57790910-57790929 None:intergenic 55.0%
TATCTCCGACCAGTTTCCGG+CGG - chr2.1:57790917-57790936 MS.gene00210:intron 55.0%
! AGCGGTGACTTGATAGCCAG+TGG + chr2.1:57792554-57792573 None:intergenic 55.0%
! ATCTGGAGTGTGACTCGAGC+GGG + chr2.1:57792582-57792601 None:intergenic 55.0%
! CATCTGGAGTGTGACTCGAG+CGG + chr2.1:57792583-57792602 None:intergenic 55.0%
! TTCTCGCAGCACAAAGGCGT+TGG - chr2.1:57793781-57793800 MS.gene00210:CDS 55.0%
!!! CCGTCGATTTTAGGCCATCG+TGG - chr2.1:57793459-57793478 MS.gene00210:intron 55.0%
ACAAGTACACGGAGACCCGC+CGG + chr2.1:57790936-57790955 None:intergenic 60.0%
ATCTCCGACCAGTTTCCGGC+GGG - chr2.1:57790918-57790937 MS.gene00210:intron 60.0%
TGACTCGAGCGGGCCAATAG+CGG + chr2.1:57792572-57792591 None:intergenic 60.0%
GAGACCCGCCGGAAACTGGT+CGG + chr2.1:57790925-57790944 None:intergenic 65.0%
CACGGAGACCCGCCGGAAAC+TGG + chr2.1:57790929-57790948 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 57790849 57793876 57790849 ID=MS.gene00210
chr2.1 mRNA 57790849 57793876 57790849 ID=MS.gene00210.t1;Parent=MS.gene00210
chr2.1 exon 57793705 57793876 57793705 ID=MS.gene00210.t1.exon1;Parent=MS.gene00210.t1
chr2.1 CDS 57793705 57793876 57793705 ID=cds.MS.gene00210.t1;Parent=MS.gene00210.t1
chr2.1 exon 57793193 57793345 57793193 ID=MS.gene00210.t1.exon2;Parent=MS.gene00210.t1
chr2.1 CDS 57793193 57793345 57793193 ID=cds.MS.gene00210.t1;Parent=MS.gene00210.t1
chr2.1 exon 57792710 57793084 57792710 ID=MS.gene00210.t1.exon3;Parent=MS.gene00210.t1
chr2.1 CDS 57792710 57793084 57792710 ID=cds.MS.gene00210.t1;Parent=MS.gene00210.t1
chr2.1 exon 57792364 57792440 57792364 ID=MS.gene00210.t1.exon4;Parent=MS.gene00210.t1
chr2.1 CDS 57792364 57792440 57792364 ID=cds.MS.gene00210.t1;Parent=MS.gene00210.t1
chr2.1 exon 57791039 57791995 57791039 ID=MS.gene00210.t1.exon5;Parent=MS.gene00210.t1
chr2.1 CDS 57791039 57791995 57791039 ID=cds.MS.gene00210.t1;Parent=MS.gene00210.t1
chr2.1 exon 57790849 57790935 57790849 ID=MS.gene00210.t1.exon6;Parent=MS.gene00210.t1
chr2.1 CDS 57790849 57790935 57790849 ID=cds.MS.gene00210.t1;Parent=MS.gene00210.t1
Gene Sequence

>MS.gene00210

ATGAAACTCAACAACAACAACAAAATTTCCATGTCAACCTCAACTTCACCATCAAACTCCGGCAACCTTATCTCCGACCAGTTTCCGGCGGGTCTCCGTGTACTTGTTGTTGATGATGACCCTACTTGCCTCATGATCCTTGAAAGAATGCTCCGTTTTTGCCTCTATGAAGGTCTTCAATCTTCATCTTTGTTTCACTATTGCCCATCATGAATTAGTGTTAAAAATCTTAACTTTACATCATTTTTTCAACGTTTATGTGCTTATAGATGCAAATTAGTAATACCCTTTTGTTTGATTGAGTTTTTTTATTCAGACCCATTTTTATTTTTAGTTCAGATTCTTGGTTGCAACCATCTTTCTTTTGAATTATGCTTTTGATATGATTTAATATGGTAGATTTGTTTGATAAGTGTTTTTTTCAACTATTGGAATTTATTCCAAAGTTAAAGTTTGAGACTTTAGTATATTGTGTAAGTTTTGTTGTTCACCATTTGATTCTGTTTTGCTTGTTGGGTATGTTTGTTTCAGTTACCAAATGCAAGAGAGCTGAGGTTGCATTATCACTTCTTAGAGAGAATAAAAACGGGTTCGACATTGTTTTAAGCGACGTGCATATGCCTGATATGGATGGATTCAAACTTTTGGAACATATTGGATTGGAGATGGATCTTCCTGTTATTAGTAAGCATTGTTTTTTTTTTTTTTTATTGATTTGGATCAGTTGATGCAATATGCAATGACATGAGTTGACATATTTTGTGTGTGCGTGTTTGTGTGAATGTGTTTTAGTGATGTCGGCTGATGATGGAAAAAACGTGGTAATGAAAGGTGTGACACACGGTGCTTGTGATTATCTAATCAAACCTGTGCGAATCGAGGCTTTGAAGAATATATGGCAGCATGTGGTTCGGAAGAGAAAGAATAACTGGAAAGATCTGAAGCAATCTGGTGGATTAGATGAAAGAGATCGAGAAAAAATTGTGTCCACTGATGCTAATTACTCATCTTCAACGAATGAAGGCAAGAGCTCAAAGAAGAGGAGGGATGAAGAAGATGAAGCAGATGATAGGGATGATTGTTCGACGTCAAAGAAGCCTCGAGTTGTTTGGTCTATTGAGCTTCATCAACAGTTTATGGCTGTTGTGAATCAATTGGGATTAGACAGTATGTGTCCCTTAATTATGTTATATCCTTGCAAAAATGTTCTCTTTCATCTTTGTTTGTTTTCCACGGTATCTCATCTAACGTACAAACCATTCCCTTAAAGTTTTTCCGAGATATAATCCTTGTGATTCTACAAGATTGTTTTTATCTCTAAATTAGCCCTTTTCCCCCATAGAATCTTAAATATTTCTGCTTGTCTAATTGATTTTTATATGTAATGTTAAGTAAAGTCGTCATCTTATGTTTTCAAAATTGATATTGATATGCAGAGGCTGTTCCTAAAAAGATTATGGAAATGATGAATGTTCCTGGGCTCACTAGAGAAAACGTTGCCAGTCATCTTCAGGTACGATATACTAAAAAGATTATACTTCCTCTATTTTTGTTATTGTTAAGAGTCCCACGTTAGATGAGATATGACCTATAATAAGTTAGTTTAGAAGTGGTGGACGATCCTCATCGTACAAACTGATTTTGTAAGGGTTGAGCAACTGATATTCTAGATGTTATTAGAGCCTATATAAGATCTCATGGGCCACTGGCTATCAAGTCACCGCTATTGGCCCGCTCGAGTCACACTCCAGATGTCCACTTATCAGTGTGAGGGGGTGTGTAAAGTCTAAAGAATCCACTTGAATGTTAAGAGTTACAGTCATCAACGATATTGCTTGAAGAAGCTAACTTTCTTCATCTGTTTTTTATTTTCTTATACAGAAATACCGTTTGTATCTTCGAAGGTTGAGTGGAGTTTCCCAGCAGCAAAGTAACTTGAATAACTCCTTCATGAGTACGCCAGAGTCAATATTTGGAGGAACCTCCGTAAATGAAATTGATCTTCAAACCCTTTCAGCTTCTGGCCAGTTCTCGGTGCAAAGTCTAGCCAAGCTTCAAGCAGCAGGACTTTACAGTCCTGAGAACTCAAAACTAAGATTTGGAGATGGGCAACTGCAACATATGAGCAGCAGTAAACCGGTGAACTTTCTTCACGGAATCCCTATCAACATTGAGCCAAAGCAGTTTGCCAATTTTCACCAGTCTGCTCAATCCTTTGGCAGCGCAAATATGCGAGTCAATGCTTCTGCTGCAAAGAGAAGCCCTTGGTTGATGCAGATGGCTCAGTCTCAACCAAGAGGTCAGATGCTAAATGAGAATACAAATTCTCATGCTACAAGGTTTCCATCATCTTTAATGCAACCTACAGGACCAAATGGAATATCAGTCAATAGTTTCCCTCTTAGATGCACTCCGGGTATATCCAGTAGCAGTACAAAAGGCGTGTTTCATGCGGAAGCTACTTCGGGAATTAAAGGATTAGGGGGATTTAGTTATGATGTTTATAATGAACTCCATCAGAAGTCCAATGATTGGGGATTAGCAAATACAGGCCTGACATATGATGCTTCTCAACATGCAAATCCTTTACAAGGCAACATTGATCTCTCGCCGTCGATTTTAGGCCATCGTGGTTTTTCCTCTATCCAACAGACTCGACAAAATAGAGATGGTATGAGTCAAGGTGATCACCATAATGTTGGTCAACACCTCAATACAACTTTTGTCGACAATTCATTAAGGGGTAAGAGTGAAAGAATTCCGAGTACAAACATTGAGATCAACCCCTTCTCTGATCAAGTCAGTCAAGAGGATCTCATGAGCGTATTTCTGAACCAGGTTGGTTCTTCCTTTCTGTTGACCCTAAATATTTATGTTTCCTTACTTTTCCTTTATAGACAAATCATTTATTTTCATTTTTTTTTTTTTGTATTTCTCGCAGCACAAAGGCGTTGGACAAGTTGATAATGAGTTTGACTTTGATGGATATTCCGCAGACAACATTCCAGTTTATAACAGATCCTGTTAG
Protein sequence

>MS.gene00210.t1

MKLNNNNKISMSTSTSPSNSGNLISDQFPAGLRVLVVDDDPTCLMILERMLRFCLYEVTKCKRAEVALSLLRENKNGFDIVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNNWKDLKQSGGLDERDREKIVSTDANYSSSTNEGKSSKKRRDEEDEADDRDDCSTSKKPRVVWSIELHQQFMAVVNQLGLDKAVPKKIMEMMNVPGLTRENVASHLQKYRLYLRRLSGVSQQQSNLNNSFMSTPESIFGGTSVNEIDLQTLSASGQFSVQSLAKLQAAGLYSPENSKLRFGDGQLQHMSSSKPVNFLHGIPINIEPKQFANFHQSAQSFGSANMRVNASAAKRSPWLMQMAQSQPRGQMLNENTNSHATRFPSSLMQPTGPNGISVNSFPLRCTPGISSSSTKGVFHAEATSGIKGLGGFSYDVYNELHQKSNDWGLANTGLTYDASQHANPLQGNIDLSPSILGHRGFSSIQQTRQNRDGMSQGDHHNVGQHLNTTFVDNSLRGKSERIPSTNIEINPFSDQVSQEDLMSVFLNQHKGVGQVDNEFDFDGYSADNIPVYNRSC