AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene041870

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene041870.t1 MTR_4g121020 98.532 681 9 1 1 680 1 681 0.0 1377
MS.gene041870.t1 MTR_4g121020 98.385 681 9 2 1 680 1 680 0.0 1371
MS.gene041870.t1 MTR_4g121020 97.902 572 11 1 110 680 6 577 0.0 1146
MS.gene041870.t1 MTR_2g034960 62.445 679 170 13 6 680 4 601 0.0 766
MS.gene041870.t1 MTR_1g032570 57.012 328 131 5 24 345 4 327 2.63e-117 365
MS.gene041870.t1 MTR_3g106220 59.542 262 98 2 26 280 3 263 4.62e-101 323
MS.gene041870.t1 MTR_3g086100 60.784 255 98 1 31 283 13 267 1.64e-97 311
MS.gene041870.t1 MTR_8g079940 59.216 255 104 0 29 283 23 277 5.94e-95 303
MS.gene041870.t1 MTR_1g013170 57.414 263 98 3 28 282 2 258 2.20e-94 301
MS.gene041870.t1 MTR_2g450070 45.767 378 173 9 29 387 16 380 4.80e-89 292
MS.gene041870.t1 MTR_2g450070 45.767 378 173 9 29 387 16 380 7.72e-89 292
MS.gene041870.t1 MTR_1g032570 56.489 262 104 5 90 345 1 258 1.05e-87 285
MS.gene041870.t1 MTR_7g117705 52.313 281 116 5 28 300 2 272 1.16e-85 277
MS.gene041870.t1 MTR_4g131600 46.237 372 165 11 25 385 17 364 2.87e-84 277
MS.gene041870.t1 MTR_1g013180 56.757 259 96 3 29 278 154 405 5.08e-84 279
MS.gene041870.t1 MTR_4g131580 47.368 342 152 9 31 356 17 346 5.97e-83 274
MS.gene041870.t1 MTR_4g131570 45.251 358 158 10 29 364 15 356 1.76e-80 267
MS.gene041870.t1 MTR_3g102590 47.212 269 89 3 26 291 3 221 1.34e-66 219
MS.gene041870.t1 MTR_3g086100 56.122 196 84 1 90 283 1 196 2.71e-64 221
MS.gene041870.t1 MTR_3g102590 49.583 240 70 2 26 264 3 192 1.19e-60 201
MS.gene041870.t1 MTR_4g021855 42.562 242 113 2 31 272 10 225 1.97e-56 194
MS.gene041870.t1 MTR_4g021760 42.324 241 113 4 31 271 11 225 5.21e-56 193
MS.gene041870.t1 MTR_4g021790 42.562 242 113 2 31 272 10 225 1.17e-55 191
MS.gene041870.t1 MTR_4g021845 41.880 234 110 2 31 264 10 217 9.81e-55 187
MS.gene041870.t1 MTR_3g102600 40.293 273 99 4 28 299 5 214 1.72e-53 184
MS.gene041870.t1 MTR_3g102600 61.069 131 51 0 28 158 5 135 1.44e-48 169
MS.gene041870.t1 MTR_3g102600 62.264 53 20 0 214 266 131 183 4.34e-16 77.4
MS.gene041870.t1 MTR_0450s0040 36.965 257 137 2 33 283 6 243 1.50e-48 174
MS.gene041870.t1 MTR_6g045327 38.934 244 119 6 30 271 13 228 1.06e-44 164
MS.gene041870.t1 MTR_8g105600 40.244 246 133 6 31 272 9 244 1.14e-42 163
MS.gene041870.t1 MTR_7g026400 39.720 214 115 3 61 274 17 216 1.04e-39 155
MS.gene041870.t1 MTR_5g055260 37.860 243 96 7 31 272 10 198 3.58e-39 145
MS.gene041870.t1 MTR_1g013160 49.367 158 58 3 93 238 1 148 1.52e-37 137
MS.gene041870.t1 MTR_3g102600 61.628 86 33 0 73 158 1 86 5.87e-33 124
MS.gene041870.t1 MTR_3g102600 62.264 53 20 0 214 266 82 134 9.08e-17 77.8
MS.gene041870.t1 MTR_3g102600 61.628 86 33 0 73 158 1 86 4.37e-32 123
MS.gene041870.t1 MTR_3g102600 52.326 86 39 1 214 299 82 165 7.68e-23 96.7
MS.gene041870.t1 MTR_8g032710 31.481 270 162 6 33 281 19 286 6.51e-31 127
MS.gene041870.t1 MTR_8g093040 43.750 128 72 0 30 157 13 140 5.01e-28 114
MS.gene041870.t1 MTR_4g023980 32.919 161 83 1 81 241 39 174 1.49e-25 104
MS.gene041870.t1 MTR_3g092780 34.239 184 114 3 35 212 56 238 1.35e-24 109
MS.gene041870.t1 MTR_3g092780 34.239 184 114 3 35 212 56 238 1.97e-24 108
MS.gene041870.t1 MTR_4g064730 54.082 98 37 2 188 277 96 193 4.17e-24 103
MS.gene041870.t1 MTR_3g092780 34.239 184 113 4 35 212 56 237 2.03e-23 105
MS.gene041870.t1 MTR_3g092780 34.239 184 113 4 35 212 56 237 3.33e-23 105
MS.gene041870.t1 MTR_7g089010 63.768 69 25 0 208 276 84 152 4.99e-23 100
MS.gene041870.t1 MTR_6g016850 36.220 127 78 2 29 153 7 132 1.25e-22 95.9
MS.gene041870.t1 MTR_7g118260 38.686 137 73 3 25 153 2 135 2.73e-21 98.6
MS.gene041870.t1 MTR_7g118260 38.686 137 73 3 25 153 2 135 3.05e-21 98.6
MS.gene041870.t1 MTR_4g061360 38.211 123 71 2 35 153 89 210 4.21e-21 99.0
MS.gene041870.t1 MTR_1g067110 38.525 122 72 1 35 153 85 206 1.14e-20 97.4
MS.gene041870.t1 MTR_1g067110 38.525 122 72 1 35 153 85 206 1.36e-20 97.1
MS.gene041870.t1 MTR_8g024260 39.344 122 67 3 37 153 38 157 2.74e-19 92.8
MS.gene041870.t1 MTR_3g037390 34.677 124 78 1 35 155 24 147 6.23e-19 91.3
MS.gene041870.t1 MTR_5g014040 57.971 69 29 0 205 273 301 369 1.03e-18 90.5
MS.gene041870.t1 MTR_5g014040 36.364 132 80 2 26 156 9 137 1.63e-14 77.4
MS.gene041870.t1 MTR_4g108880 35.036 137 83 3 23 155 22 156 1.49e-18 90.1
MS.gene041870.t1 MTR_4g098870 50.000 78 37 1 214 291 309 384 1.50e-17 87.0
MS.gene041870.t1 MTR_4g098870 36.220 127 77 2 31 156 14 137 1.63e-13 73.9
MS.gene041870.t1 MTR_4g098870 50.000 78 37 1 214 291 329 404 1.79e-17 86.7
MS.gene041870.t1 MTR_4g098870 36.220 127 77 2 31 156 34 157 2.07e-13 73.9
MS.gene041870.t1 MTR_4g098870 50.000 78 37 1 214 291 329 404 1.93e-17 86.7
MS.gene041870.t1 MTR_4g098870 36.220 127 77 2 31 156 34 157 4.37e-13 72.8
MS.gene041870.t1 MTR_4g098870 50.000 78 37 1 214 291 348 423 1.93e-17 86.7
MS.gene041870.t1 MTR_4g098870 36.220 127 77 2 31 156 53 176 2.98e-13 73.6
MS.gene041870.t1 MTR_4g098870 50.000 78 37 1 214 291 309 384 1.96e-17 86.7
MS.gene041870.t1 MTR_4g098870 36.220 127 77 2 31 156 14 137 3.87e-13 72.8
MS.gene041870.t1 MTR_5g014040 54.054 74 29 1 205 273 261 334 7.67e-17 84.3
MS.gene041870.t1 MTR_5g014040 54.054 74 29 1 205 273 301 374 9.26e-17 84.3
MS.gene041870.t1 MTR_5g014040 36.364 132 80 2 26 156 9 137 1.50e-14 77.4
MS.gene041870.t1 MTR_4g078810 58.333 60 25 0 214 273 157 216 4.78e-16 81.3
MS.gene041870.t1 MTR_2g090675 45.977 87 45 1 214 300 160 244 9.03e-16 80.5
MS.gene041870.t1 MTR_1g093080 50.000 82 40 1 203 283 199 280 9.29e-16 80.1
MS.gene041870.t1 MTR_6g088950 28.994 169 94 4 47 191 3 169 1.10e-15 77.0
MS.gene041870.t1 MTR_7g115530 46.739 92 40 2 215 305 218 301 2.05e-14 75.1
MS.gene041870.t1 MTR_5g041350 57.627 59 24 1 211 268 11 69 2.60e-14 75.5
MS.gene041870.t1 MTR_7g115530 46.739 92 40 2 215 305 218 301 2.73e-14 75.1
MS.gene041870.t1 MTR_5g054300 40.541 111 53 4 202 300 186 295 4.62e-14 74.7
MS.gene041870.t1 MTR_7g115530 46.739 92 40 2 215 305 218 301 4.84e-14 75.5
MS.gene041870.t1 MTR_4g086835 54.545 66 30 0 212 277 271 336 5.83e-14 74.7
MS.gene041870.t1 MTR_6g453220 67.308 52 17 0 231 282 379 430 1.20e-13 74.3
MS.gene041870.t1 MTR_6g032990 55.932 59 25 1 211 268 38 96 1.40e-13 73.6
MS.gene041870.t1 MTR_5g017980 56.667 60 26 0 214 273 191 250 1.49e-13 72.8
MS.gene041870.t1 MTR_5g017980 56.667 60 26 0 214 273 192 251 1.60e-13 72.8
MS.gene041870.t1 MTR_2g086450 55.932 59 25 1 211 268 41 99 2.77e-13 72.4
MS.gene041870.t1 MTR_4g081710 54.237 59 26 1 211 268 13 71 6.57e-13 70.9
MS.gene041870.t1 MTR_5g017980 55.738 61 26 1 214 273 192 252 1.60e-12 69.7
MS.gene041870.t1 MTR_6g444980 57.627 59 24 1 211 268 31 89 1.66e-12 69.7
MS.gene041870.t1 MTR_7g115530 64.815 54 18 1 215 267 218 271 1.72e-12 69.7
MS.gene041870.t1 MTR_4g086835 53.731 67 30 1 212 277 271 337 1.78e-12 70.1
MS.gene041870.t1 MTR_6g444980 53.731 67 30 1 203 268 23 89 1.91e-12 69.7
MS.gene041870.t1 MTR_7g098250 44.792 96 44 3 211 305 258 345 2.16e-12 70.5
MS.gene041870.t1 MTR_1g080330 41.237 97 48 2 210 305 170 258 2.40e-12 68.6
MS.gene041870.t1 MTR_4g113140 52.941 68 31 1 212 278 232 299 2.80e-12 69.7
MS.gene041870.t1 MTR_1g080330 41.237 97 48 2 210 305 170 258 2.97e-12 69.3
MS.gene041870.t1 MTR_1g090670 60.000 55 21 1 215 268 44 98 4.73e-12 67.8
MS.gene041870.t1 MTR_5g027440 56.364 55 23 1 215 268 25 79 1.73e-11 65.9
MS.gene041870.t1 MTR_7g088070 56.364 55 23 1 215 268 50 104 1.83e-11 65.9
MS.gene041870.t1 MTR_7g088070 56.364 55 23 1 215 268 50 104 1.85e-11 65.9
MS.gene041870.t1 MTR_7g115530 63.462 52 18 1 215 265 218 269 4.59e-11 64.7
MS.gene041870.t1 MTR_2g027800 58.182 55 22 1 215 268 39 93 5.04e-11 64.7
MS.gene041870.t1 MTR_2g027800 58.182 55 22 1 215 268 39 93 5.17e-11 64.7
MS.gene041870.t1 MTR_2g027860 58.182 55 22 1 215 268 49 103 9.90e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene041870.t1 AT3G16857 53.868 698 238 28 29 680 31 690 0.0 617
MS.gene041870.t1 AT3G16857 53.481 675 232 26 29 658 31 668 0.0 592
MS.gene041870.t1 AT3G16857 51.750 657 233 28 70 680 2 620 0.0 534
MS.gene041870.t1 AT2G25180 47.255 419 179 12 20 414 2 402 3.53e-99 317
MS.gene041870.t1 AT2G01760 52.492 301 123 3 29 320 5 294 1.63e-93 295
MS.gene041870.t1 AT4G31920 55.556 279 96 4 29 301 11 267 2.13e-89 290
MS.gene041870.t1 AT1G67710 63.052 249 81 5 32 273 8 252 3.66e-89 288
MS.gene041870.t1 AT2G01760 48.024 329 123 4 29 320 5 322 1.21e-87 280
MS.gene041870.t1 AT5G58080 51.034 290 135 4 29 317 12 295 5.34e-82 272
MS.gene041870.t1 AT2G01760 49.583 240 101 3 90 320 1 229 5.52e-61 207
MS.gene041870.t1 AT1G67710 60.209 191 65 5 90 273 1 187 5.85e-58 203
MS.gene041870.t1 AT5G49240 41.825 263 132 4 28 279 35 287 1.53e-55 191
MS.gene041870.t1 AT1G49190 35.048 311 161 9 11 302 15 303 3.41e-47 172
MS.gene041870.t1 AT3G62670 36.859 312 164 10 36 337 42 330 6.33e-46 169
MS.gene041870.t1 AT1G67710 55.556 171 65 5 110 273 12 178 1.90e-42 160
MS.gene041870.t1 AT5G07210 34.701 268 145 6 35 274 16 281 2.33e-39 154
MS.gene041870.t1 AT5G07210 33.696 276 145 7 35 274 16 289 9.19e-37 146
MS.gene041870.t1 AT2G27070 33.333 270 147 7 35 273 16 283 5.50e-34 137
MS.gene041870.t1 AT1G49190 42.361 144 78 1 11 154 15 153 6.27e-30 125
MS.gene041870.t1 AT3G46640 60.759 79 28 1 202 277 128 206 4.10e-24 104
MS.gene041870.t1 AT3G46640 60.759 79 28 1 202 277 128 206 4.10e-24 104
MS.gene041870.t1 AT3G46640 60.759 79 28 1 202 277 128 206 6.74e-24 103
MS.gene041870.t1 AT5G59570 59.036 83 31 2 202 281 125 207 1.80e-23 101
MS.gene041870.t1 AT5G59570 59.036 83 31 2 202 281 125 207 1.80e-23 101
MS.gene041870.t1 AT2G46790 39.837 123 69 2 35 153 37 158 2.89e-23 103
MS.gene041870.t1 AT2G46790 39.837 123 69 2 35 153 37 158 3.14e-23 103
MS.gene041870.t1 AT2G40970 66.667 66 22 0 208 273 98 163 7.21e-23 99.0
MS.gene041870.t1 AT5G05090 62.667 75 26 1 201 273 65 139 8.42e-23 99.0
MS.gene041870.t1 AT3G10760 69.355 62 19 0 212 273 102 163 3.61e-22 99.0
MS.gene041870.t1 AT1G68210 26.937 271 165 5 35 274 13 281 1.74e-21 100
MS.gene041870.t1 AT5G60100 39.024 123 70 2 35 153 64 185 3.01e-21 97.4
MS.gene041870.t1 AT5G60100 39.024 123 70 2 35 153 64 185 3.01e-21 97.4
MS.gene041870.t1 AT5G60100 39.024 123 70 2 35 153 64 185 3.01e-21 97.4
MS.gene041870.t1 AT5G60100 39.024 123 70 2 35 153 64 185 4.02e-21 97.8
MS.gene041870.t1 AT5G60100 39.024 123 70 2 35 153 64 185 4.02e-21 97.8
MS.gene041870.t1 AT5G60100 39.024 123 70 2 35 153 64 185 4.02e-21 97.8
MS.gene041870.t1 AT5G60100 39.024 123 70 2 35 153 64 185 7.51e-21 97.1
MS.gene041870.t1 AT5G02810 39.344 122 71 1 35 153 78 199 1.65e-20 97.1
MS.gene041870.t1 AT5G24470 37.600 125 73 2 34 154 49 172 2.07e-20 95.9
MS.gene041870.t1 AT5G61380 35.556 135 82 2 26 155 8 142 1.81e-19 93.2
MS.gene041870.t1 AT5G44190 62.121 66 25 0 208 273 140 205 2.31e-19 90.9
MS.gene041870.t1 AT5G44190 62.121 66 25 0 208 273 140 205 2.38e-19 91.3
MS.gene041870.t1 AT2G20570 42.727 110 62 1 165 273 102 211 3.95e-17 84.7
MS.gene041870.t1 AT2G20570 48.936 94 46 1 182 273 134 227 2.63e-16 82.4
MS.gene041870.t1 AT4G18020 34.074 135 81 2 155 289 243 369 6.72e-15 78.2
MS.gene041870.t1 AT4G18020 36.765 136 77 3 29 157 12 145 3.98e-14 75.9
MS.gene041870.t1 AT4G18020 34.074 135 81 2 155 289 243 369 6.72e-15 78.2
MS.gene041870.t1 AT4G18020 36.765 136 77 3 29 157 12 145 3.98e-14 75.9
MS.gene041870.t1 AT4G18020 34.074 135 81 2 155 289 243 369 6.72e-15 78.2
MS.gene041870.t1 AT4G18020 36.765 136 77 3 29 157 12 145 3.98e-14 75.9
MS.gene041870.t1 AT4G18020 34.074 135 81 2 155 289 243 369 6.72e-15 78.2
MS.gene041870.t1 AT4G18020 36.765 136 77 3 29 157 12 145 3.98e-14 75.9
MS.gene041870.t1 AT4G18020 34.074 135 81 2 155 289 243 369 6.72e-15 78.2
MS.gene041870.t1 AT4G18020 36.765 136 77 3 29 157 12 145 3.98e-14 75.9
MS.gene041870.t1 AT4G18020 34.074 135 81 2 155 289 243 369 6.72e-15 78.2
MS.gene041870.t1 AT4G18020 36.765 136 77 3 29 157 12 145 3.98e-14 75.9
MS.gene041870.t1 AT4G18020 34.074 135 81 2 155 289 243 369 8.02e-15 78.2
MS.gene041870.t1 AT4G18020 36.765 136 77 3 29 157 12 145 5.34e-14 75.5
MS.gene041870.t1 AT4G18020 34.074 135 81 2 155 289 243 369 8.02e-15 78.2
MS.gene041870.t1 AT4G18020 36.765 136 77 3 29 157 12 145 5.34e-14 75.5
MS.gene041870.t1 AT4G18020 34.074 135 81 2 155 289 243 369 8.02e-15 78.2
MS.gene041870.t1 AT4G18020 36.765 136 77 3 29 157 12 145 5.34e-14 75.5
MS.gene041870.t1 AT4G18020 34.074 135 81 2 155 289 243 369 8.02e-15 78.2
MS.gene041870.t1 AT4G18020 36.765 136 77 3 29 157 12 145 5.34e-14 75.5
MS.gene041870.t1 AT4G18020 34.074 135 81 2 155 289 243 369 8.02e-15 78.2
MS.gene041870.t1 AT4G18020 36.765 136 77 3 29 157 12 145 5.34e-14 75.5
MS.gene041870.t1 AT3G04030 52.000 75 31 3 211 284 41 111 5.70e-14 74.7
MS.gene041870.t1 AT3G04030 52.000 75 31 3 211 284 41 111 6.08e-14 74.7
MS.gene041870.t1 AT5G29000 34.682 173 84 6 154 305 110 274 6.22e-14 74.3
MS.gene041870.t1 AT5G29000 34.682 173 84 6 154 305 110 274 6.22e-14 74.3
MS.gene041870.t1 AT5G29000 34.682 173 84 6 154 305 153 317 6.45e-14 74.7
MS.gene041870.t1 AT5G18240 57.627 59 24 1 211 268 41 99 2.44e-13 72.8
MS.gene041870.t1 AT5G18240 57.627 59 24 1 211 268 41 99 2.44e-13 72.8
MS.gene041870.t1 AT5G18240 57.627 59 24 1 211 268 41 99 2.64e-13 72.8
MS.gene041870.t1 AT5G18240 57.627 59 24 1 211 268 41 99 2.64e-13 72.8
MS.gene041870.t1 AT5G18240 57.627 59 24 1 211 268 41 99 2.64e-13 72.8
MS.gene041870.t1 AT5G29000 37.594 133 63 4 154 267 153 284 5.15e-13 70.9
MS.gene041870.t1 AT3G04030 48.649 74 34 2 211 284 41 110 9.09e-13 71.2
MS.gene041870.t1 AT1G79430 57.627 59 24 1 211 268 30 88 1.69e-12 70.1
MS.gene041870.t1 AT3G04450 42.424 99 47 3 210 305 193 284 1.98e-12 70.1
MS.gene041870.t1 AT3G04450 42.424 99 47 3 210 305 193 284 1.98e-12 70.1
MS.gene041870.t1 AT3G04450 42.424 99 47 3 210 305 233 324 2.03e-12 70.5
MS.gene041870.t1 AT1G69580 52.542 59 27 1 211 268 30 88 3.08e-12 68.9
MS.gene041870.t1 AT1G69580 52.542 59 27 1 211 268 30 88 3.13e-12 68.9
MS.gene041870.t1 AT1G25550 48.611 72 36 1 202 272 196 267 4.19e-12 68.6
MS.gene041870.t1 AT3G24120 58.182 55 22 1 215 268 41 95 4.50e-12 67.8
MS.gene041870.t1 AT3G24120 58.182 55 22 1 215 268 41 95 4.56e-12 67.8
MS.gene041870.t1 AT3G12730 52.174 69 26 2 207 268 9 77 4.89e-12 66.6
MS.gene041870.t1 AT5G45580 56.364 55 23 1 215 268 7 61 5.51e-12 67.0
MS.gene041870.t1 AT5G45580 56.364 55 23 1 215 268 23 77 6.96e-12 67.0
MS.gene041870.t1 AT2G03500 54.839 62 27 1 214 274 232 293 6.97e-12 68.6
MS.gene041870.t1 AT4G13640 58.182 55 22 1 215 268 37 91 1.08e-11 66.6
MS.gene041870.t1 AT4G13640 58.182 55 22 1 215 268 37 91 1.09e-11 66.6
MS.gene041870.t1 AT3G04450 54.237 59 26 1 210 267 233 291 1.31e-11 66.6
MS.gene041870.t1 AT2G01060 55.738 61 26 1 209 268 9 69 2.53e-11 65.5
MS.gene041870.t1 AT1G68670 46.914 81 40 2 200 277 198 278 4.30e-11 65.5

Find 0 sgRNAs with CRISPR-Local

Find 251 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAAATGATTTGTTTGTAA+TGG + 32496:21829-21848 None:intergenic 15.0%
!!! AAATGGTTTTAAAGAAAATT+TGG + 32496:19997-20016 None:intergenic 15.0%
!!! TATAATTCTTTTAAAAACAC+TGG + 32496:20255-20274 None:intergenic 15.0%
!! ATCTATTATAGAACTAATAG+AGG + 32496:20112-20131 None:intergenic 20.0%
!! TAGGGATATAAAATTTAACT+TGG + 32496:20496-20515 None:intergenic 20.0%
!! TCAAAATGAAAATCAAAATC+TGG + 32496:18956-18975 None:intergenic 20.0%
!! TCGTTAAAAATATCATAACT+TGG + 32496:21367-21386 None:intergenic 20.0%
!! TTATGTTGAAAATTCAACAA+GGG - 32496:21642-21661 MS.gene041870:intron 20.0%
!! TTTAAACTCTTAGAACATAT+TGG - 32496:19229-19248 MS.gene041870:CDS 20.0%
!! TTTATGTTGAAAATTCAACA+AGG - 32496:21641-21660 MS.gene041870:intron 20.0%
!!! ACTATTGATTCATTTCTTAT+TGG - 32496:20084-20103 MS.gene041870:intron 20.0%
!!! AGGGATATAAAATTTAACTT+GGG + 32496:20495-20514 None:intergenic 20.0%
!!! ATCAATTCCAGAATTTTTTT+GGG + 32496:20392-20411 None:intergenic 20.0%
!!! TTTAAAATACCATTGAAACA+TGG - 32496:18985-19004 MS.gene041870:CDS 20.0%
!!! TTTTTGAATAGTTTGCATAT+GGG + 32496:18750-18769 None:intergenic 20.0%
!!! TTTTTTGAATAGTTTGCATA+TGG + 32496:18751-18770 None:intergenic 20.0%
! AATCAATAGTAGAACTTCTA+GGG + 32496:20074-20093 None:intergenic 25.0%
! AGAAATATCAAACTTGAATC+AGG + 32496:20355-20374 None:intergenic 25.0%
! AGGTACTCAAACAAATATTA+GGG + 32496:20298-20317 None:intergenic 25.0%
! CATACAAGAAAAATGTATGA+CGG + 32496:20192-20211 None:intergenic 25.0%
! CTCATAATTCATTCTTTCTA+TGG - 32496:21769-21788 MS.gene041870:CDS 25.0%
! GAATAATTAAGATTCAGTTG+TGG - 32496:19922-19941 MS.gene041870:CDS 25.0%
! TTTAATTCCCGAATTAACTT+CGG + 32496:21329-21348 None:intergenic 25.0%
!! AAGGTACTCAAACAAATATT+AGG + 32496:20299-20318 None:intergenic 25.0%
!! GTTGAATTTTCAACATAAAG+AGG + 32496:21640-21659 None:intergenic 25.0%
!!! ATTCTTTTAAAAACACTGGA+TGG + 32496:20251-20270 None:intergenic 25.0%
!!! CATCAATTCCAGAATTTTTT+TGG + 32496:20393-20412 None:intergenic 25.0%
AAACCAACAAATCTTCTTCA+CGG - 32496:20887-20906 MS.gene041870:CDS 30.0%
AATAGATTGAACTGCTTCAA+GGG - 32496:20125-20144 MS.gene041870:intron 30.0%
ACTCTTAGAACATATTGGAT+TGG - 32496:19234-19253 MS.gene041870:CDS 30.0%
AGCCAAAGAAGAAGAAAAAA+AGG + 32496:18864-18883 None:intergenic 30.0%
AGTACTTACTAATAACTGGA+AGG + 32496:19267-19286 None:intergenic 30.0%
ATAGAGAACTAAGAAACTGT+AGG + 32496:20048-20067 None:intergenic 30.0%
ATATCTAGTATCACAACCAA+AGG - 32496:21292-21311 MS.gene041870:intron 30.0%
ATGATGAATCTAAGCAACAA+CGG - 32496:18436-18455 MS.gene041870:CDS 30.0%
ATTTCAAGCCGAAGTTAATT+CGG - 32496:21318-21337 MS.gene041870:intron 30.0%
ATTTCAGTGCTTTGATTCAT+GGG + 32496:21235-21254 None:intergenic 30.0%
CCAGTTATTAGTAAGTACTT+TGG - 32496:19268-19287 MS.gene041870:CDS 30.0%
CGCTTAATTACTTGATTAGT+TGG - 32496:18687-18706 MS.gene041870:CDS 30.0%
GAAGTTAATTCGGGAATTAA+AGG - 32496:21328-21347 MS.gene041870:intron 30.0%
GAATCAATAGTAGAACTTCT+AGG + 32496:20075-20094 None:intergenic 30.0%
TAATAGATTGAACTGCTTCA+AGG - 32496:20124-20143 MS.gene041870:intron 30.0%
TGAAAATTCAACAAGGGTTA+AGG - 32496:21648-21667 MS.gene041870:intron 30.0%
! AACAACACTTTTACCATCAT+CGG + 32496:19392-19411 None:intergenic 30.0%
! AATATCGATTGTATCTTCGA+AGG - 32496:20579-20598 MS.gene041870:intron 30.0%
! AGAACATATTGGATTGGAAA+TGG - 32496:19240-19259 MS.gene041870:CDS 30.0%
! CCAAAGTACTTACTAATAAC+TGG + 32496:19271-19290 None:intergenic 30.0%
! TATATCCCTATGTTTTCTTG+TGG - 32496:20506-20525 MS.gene041870:intron 30.0%
! TTGGGTTTTCAAAACTGAAA+AGG + 32496:20817-20836 None:intergenic 30.0%
!! AAAAAACTTTTGAAGAGTCC+TGG + 32496:19778-19797 None:intergenic 30.0%
!! AAAAACTTTTGAAGAGTCCT+GGG + 32496:19777-19796 None:intergenic 30.0%
!! GGTAAAAGTGTTGTTATGAA+GGG - 32496:19397-19416 MS.gene041870:CDS 30.0%
!! TGGTAAAAGTGTTGTTATGA+AGG - 32496:19396-19415 MS.gene041870:CDS 30.0%
!!! GACCTTTTTTTCTTCTTCTT+TGG - 32496:18859-18878 MS.gene041870:CDS 30.0%
!!! TTTTCAGTTTTGAAAACCCA+AGG - 32496:20816-20835 MS.gene041870:CDS 30.0%
!!! TTTTTTTCTTCTTCTTTGGC+TGG - 32496:18863-18882 MS.gene041870:CDS 30.0%
AAACCTTAGCAATCTCATCT+TGG - 32496:20221-20240 MS.gene041870:intron 35.0%
AAAGAACGAGTGGAAAGATA+CGG - 32496:19507-19526 MS.gene041870:CDS 35.0%
AAATCCCTTATTGATGCAGA+TGG - 32496:21015-21034 MS.gene041870:intron 35.0%
AACCTCTTCCCTGATAATTT+CGG - 32496:21703-21722 MS.gene041870:intron 35.0%
AATCTAAGCAACAACGGAAA+AGG - 32496:18442-18461 MS.gene041870:CDS 35.0%
ACCACAATACTTCATAGCTA+AGG + 32496:20318-20337 None:intergenic 35.0%
ACTGCTACTACTATGAAATC+CGG - 32496:18487-18506 MS.gene041870:intron 35.0%
AGATGACCACAAGAAAACAT+AGG + 32496:20515-20534 None:intergenic 35.0%
AGCTCAAAACCATGTTTCAA+TGG + 32496:18997-19016 None:intergenic 35.0%
AGGAATCATATGTTAGACCT+TGG + 32496:21429-21448 None:intergenic 35.0%
AGTTTAAATCCATCCATGTC+TGG + 32496:19217-19236 None:intergenic 35.0%
CATTTCAGTGCTTTGATTCA+TGG + 32496:21236-21255 None:intergenic 35.0%
CCAATGCTAAGTGAAAATAC+TGG - 32496:21058-21077 MS.gene041870:intron 35.0%
CTTCTGCTAATGAAGGAAAT+TGG - 32496:19596-19615 MS.gene041870:CDS 35.0%
GAACAAGGTAATCTCCAAAA+TGG - 32496:21595-21614 MS.gene041870:intron 35.0%
GACGGAAAATGAATACATTC+AGG + 32496:20174-20193 None:intergenic 35.0%
GAGAAAGACAATACGCTAAA+TGG + 32496:20014-20033 None:intergenic 35.0%
GATGACCACAAGAAAACATA+GGG + 32496:20514-20533 None:intergenic 35.0%
GATTAAACCTGTTCGTATTG+AGG - 32496:19447-19466 MS.gene041870:CDS 35.0%
GCAATCAAGTTTCATCCTAT+TGG - 32496:19958-19977 MS.gene041870:CDS 35.0%
GGCTGAGAAATGAATTATTC+TGG + 32496:20625-20644 None:intergenic 35.0%
GTGTCAAATGGAATTTCTGA+CGG - 32496:21124-21143 MS.gene041870:CDS 35.0%
GTTGTGATACTAGATATACC+TGG + 32496:21289-21308 None:intergenic 35.0%
TATTCGTCTTCTGCTAATGA+AGG - 32496:19589-19608 MS.gene041870:CDS 35.0%
TCAAGAATCATAAGACACGT+GGG + 32496:18568-18587 None:intergenic 35.0%
TCAAGTTTCATCCTATTGGT+TGG - 32496:19962-19981 MS.gene041870:CDS 35.0%
TCTGTTAGTAATTTCCCTCT+TGG - 32496:21256-21275 MS.gene041870:intron 35.0%
TCTTATGGGGAGAAATAACA+TGG - 32496:21147-21166 MS.gene041870:CDS 35.0%
TGGAATTGATGAATGTTCCT+GGG - 32496:20402-20421 MS.gene041870:intron 35.0%
TTTCAAGCCGAAGTTAATTC+GGG - 32496:21319-21338 MS.gene041870:intron 35.0%
! AGAATGAGTTTGACTTTGAC+GGG - 32496:21881-21900 MS.gene041870:CDS 35.0%
! CCAGTATTTTCACTTAGCAT+TGG + 32496:21061-21080 None:intergenic 35.0%
! GAGAATGAGTTTGACTTTGA+CGG - 32496:21880-21899 MS.gene041870:CDS 35.0%
! GTCTTTTAGATAGATCTGCA+CGG + 32496:19823-19842 None:intergenic 35.0%
! GTTTTCTTGTGGTCATCTAA+CGG - 32496:20517-20536 MS.gene041870:intron 35.0%
! TTTTCTTCTGCTCAACAAAC+CGG - 32496:21514-21533 MS.gene041870:intron 35.0%
!! ACCTTAGCTATGAAGTATTG+TGG - 32496:20314-20333 MS.gene041870:intron 35.0%
!! TTGAGGCTTTGAAGAACATA+TGG - 32496:19464-19483 MS.gene041870:CDS 35.0%
!!! TTTTTTGTGTTTCTTGCAGC+AGG - 32496:21843-21862 MS.gene041870:CDS 35.0%
AAAGAGAAGGGATGATGAAG+AGG - 32496:19630-19649 MS.gene041870:CDS 40.0%
AACAGTATGATACCTGCAAG+TGG + 32496:20451-20470 None:intergenic 40.0%
ACATCGATGTTGCCATGTAA+AGG + 32496:21466-21485 None:intergenic 40.0%
ACCTCTTCCCTGATAATTTC+GGG - 32496:21704-21723 MS.gene041870:intron 40.0%
ACTACTATGAAATCCGGTGA+AGG - 32496:18493-18512 MS.gene041870:intron 40.0%
ACTCCGTGAAGAAGATTTGT+TGG + 32496:20893-20912 None:intergenic 40.0%
ATCAGGGAAGAGGTTAGTAT+GGG + 32496:21698-21717 None:intergenic 40.0%
CAAGGTAATCTCCAAAATGG+TGG - 32496:21598-21617 MS.gene041870:intron 40.0%
CAAGGTTGAGATTTGGAGAA+GGG - 32496:20834-20853 MS.gene041870:CDS 40.0%
CTACTCAGAGAGAACAAGAA+TGG - 32496:19160-19179 MS.gene041870:CDS 40.0%
CTCAAGAATCATAAGACACG+TGG + 32496:18569-18588 None:intergenic 40.0%
CTGGAATTGATGAATGTTCC+TGG - 32496:20401-20420 MS.gene041870:intron 40.0%
CTTCTCCAAATCTCAACCTT+GGG + 32496:20835-20854 None:intergenic 40.0%
GAAAACCCAAGGTTGAGATT+TGG - 32496:20827-20846 MS.gene041870:CDS 40.0%
GAACCAAGATGAGATTGCTA+AGG + 32496:20227-20246 None:intergenic 40.0%
GAGAAACTCGAGAAAGAGAA+GGG - 32496:19618-19637 MS.gene041870:CDS 40.0%
GAGATTGCTAAGGTTTGTGA+TGG + 32496:20217-20236 None:intergenic 40.0%
GGAAAATCTCCTTTCTCTCT+TGG - 32496:21562-21581 MS.gene041870:intron 40.0%
GGCTGTTCCCAAAAAAATTC+TGG - 32496:20382-20401 MS.gene041870:intron 40.0%
GGTTTCTGATACCAACCAAT+AGG + 32496:19976-19995 None:intergenic 40.0%
GTTATTCGCCTACTTCAGAA+AGG - 32496:20468-20487 MS.gene041870:intron 40.0%
TAAAGGATTTGCATGCGATG+AGG + 32496:21449-21468 None:intergenic 40.0%
TAGATCTGCACGGAAAACAA+AGG + 32496:19813-19832 None:intergenic 40.0%
TATCAGGGAAGAGGTTAGTA+TGG + 32496:21699-21718 None:intergenic 40.0%
TCGCATATTCATGTTGCCAA+GGG + 32496:20972-20991 None:intergenic 40.0%
TCGCATGCAAATCCTTTACA+TGG - 32496:21451-21470 MS.gene041870:intron 40.0%
TGGAATTTCTGACGGTCTTA+TGG - 32496:21132-21151 MS.gene041870:CDS 40.0%
TGTGCCATCTGCATCAATAA+GGG + 32496:21022-21041 None:intergenic 40.0%
TGTGGAACAGGATTAAACGA+AGG + 32496:21190-21209 None:intergenic 40.0%
TTCAAAAACGAAGAGCTCTG+TGG + 32496:21208-21227 None:intergenic 40.0%
TTCAAAGCCTCAATACGAAC+AGG + 32496:19457-19476 None:intergenic 40.0%
TTCGGAAGAAAAAGAACGAG+TGG - 32496:19497-19516 MS.gene041870:CDS 40.0%
TTGCGCACATGTCTTTATGA+AGG - 32496:18595-18614 MS.gene041870:intron 40.0%
TTGTGCCATCTGCATCAATA+AGG + 32496:21023-21042 None:intergenic 40.0%
! AGTTTGATATTTCTGCGCAG+AGG - 32496:20361-20380 MS.gene041870:intron 40.0%
! GAATTTCTGACGGTCTTATG+GGG - 32496:21134-21153 MS.gene041870:CDS 40.0%
! GGAATTTCTGACGGTCTTAT+GGG - 32496:21133-21152 MS.gene041870:CDS 40.0%
! GGGCAACAACAACTTTTGAA+TGG - 32496:20854-20873 MS.gene041870:CDS 40.0%
! GTTATGAAGGGTGTAACACA+TGG - 32496:19409-19428 MS.gene041870:CDS 40.0%
! TCAGCATCATCAGATGCTTT+TGG + 32496:19568-19587 None:intergenic 40.0%
!! AATGTTGACTGCCACCATTT+TGG + 32496:21612-21631 None:intergenic 40.0%
!!! GAAACATGGTTTTGAGCTAC+TGG - 32496:18999-19018 MS.gene041870:CDS 40.0%
AAACTGATCGGAACCTTCAC+CGG + 32496:18509-18528 None:intergenic 45.0%
AACTGAACCAGCAGAAATCC+CGG - 32496:21386-21405 MS.gene041870:intron 45.0%
AAGCCTTCTCCAAGAGAGAA+AGG + 32496:21574-21593 None:intergenic 45.0%
ACATATGGCAGCATGTGGTT+CGG - 32496:19479-19498 MS.gene041870:CDS 45.0%
AGAAGGGATGATGAAGAGGA+AGG - 32496:19634-19653 MS.gene041870:CDS 45.0%
AGCAGAGATGCTTCTTTGCT+TGG - 32496:21541-21560 MS.gene041870:intron 45.0%
AGGTTCCTTTGATCCATGAG+AGG + 32496:20797-20816 None:intergenic 45.0%
ATTTCCCTGTGTAGCAGAAG+CGG + 32496:20999-21018 None:intergenic 45.0%
CAAGATTACCGAACCTCTTG+GGG - 32496:21092-21111 MS.gene041870:CDS 45.0%
CAATGCCTCTCATGGATCAA+AGG - 32496:20789-20808 MS.gene041870:CDS 45.0%
CATCCTGCCCGAAATTATCA+GGG + 32496:21714-21733 None:intergenic 45.0%
CCAAGATTACCGAACCTCTT+GGG - 32496:21091-21110 MS.gene041870:CDS 45.0%
CCAAGGTTGAGATTTGGAGA+AGG - 32496:20833-20852 MS.gene041870:CDS 45.0%
CCTTCTCCAAATCTCAACCT+TGG + 32496:20836-20855 None:intergenic 45.0%
CGTCAACACTAAAGAAGCCT+CGG - 32496:19674-19693 MS.gene041870:CDS 45.0%
CTCGCATATTCATGTTGCCA+AGG + 32496:20973-20992 None:intergenic 45.0%
GAAGAACATATGGCAGCATG+TGG - 32496:19474-19493 MS.gene041870:CDS 45.0%
GGAGAAACTCGAGAAAGAGA+AGG - 32496:19617-19636 MS.gene041870:CDS 45.0%
GGCACGATTTCGTCAATGAA+CGG - 32496:20662-20681 MS.gene041870:CDS 45.0%
GGTAGGTCAACTGTGAAATC+AGG - 32496:20761-20780 MS.gene041870:CDS 45.0%
GTCAACACTAAAGAAGCCTC+GGG - 32496:19675-19694 MS.gene041870:CDS 45.0%
TCACGGAGTTCCTACTAACA+TGG - 32496:20904-20923 MS.gene041870:CDS 45.0%
TCATCCTGCCCGAAATTATC+AGG + 32496:21715-21734 None:intergenic 45.0%
TCCAAGATTACCGAACCTCT+TGG - 32496:21090-21109 MS.gene041870:CDS 45.0%
TCGGGAATTAAAGGATCAGC+TGG - 32496:21337-21356 MS.gene041870:intron 45.0%
TCTCCTTTCTCTCTTGGAGA+AGG - 32496:21568-21587 MS.gene041870:intron 45.0%
TGAAGGTTCCGATCAGTTTC+CGG - 32496:18510-18529 MS.gene041870:intron 45.0%
TGATGTGCATATGCCAGACA+TGG - 32496:19201-19220 MS.gene041870:CDS 45.0%
TGCAAATTGGCGAGTTGCTT+TGG + 32496:20932-20951 None:intergenic 45.0%
TGCCAAATGATGCCTCTTGT+GGG + 32496:20646-20665 None:intergenic 45.0%
TTCATTTCTCAGCCCACAAG+AGG - 32496:20631-20650 MS.gene041870:CDS 45.0%
TTCTTGTGGTCATCTAACGG+AGG - 32496:20520-20539 MS.gene041870:intron 45.0%
TTGTATCTTCGAAGGCTGAG+TGG - 32496:20587-20606 MS.gene041870:intron 45.0%
TTGTGTTTCTTGCAGCAGGA+AGG - 32496:21847-21866 MS.gene041870:CDS 45.0%
TTTCTCTCTTGGAGAAGGCT+TGG - 32496:21573-21592 MS.gene041870:intron 45.0%
! ACATTTTCTCTAGTGAGCCC+AGG + 32496:20422-20441 None:intergenic 45.0%
! CTTTGATCCATGAGAGGCAT+TGG + 32496:20791-20810 None:intergenic 45.0%
! TAAAGAAGCCTCGGGTTGTT+TGG - 32496:19683-19702 MS.gene041870:CDS 45.0%
! TAGCATTGGACCTCTAGGTT+GGG + 32496:21047-21066 None:intergenic 45.0%
! TCACTTAGCATTGGACCTCT+AGG + 32496:21052-21071 None:intergenic 45.0%
! TGACTTTGACGGGTATTCTC+TGG - 32496:21891-21910 MS.gene041870:CDS 45.0%
! TGCTTTGGCTCCATGTTAGT+AGG + 32496:20917-20936 None:intergenic 45.0%
! TTAGCATTGGACCTCTAGGT+TGG + 32496:21048-21067 None:intergenic 45.0%
! TTCGGCTTGAAATGAGCCTT+TGG + 32496:21311-21330 None:intergenic 45.0%
!! ACTTGGGTCCTTTCTGAAGT+AGG + 32496:20479-20498 None:intergenic 45.0%
!! AGAAGCATCTCTGCTATGTC+CGG + 32496:21536-21555 None:intergenic 45.0%
!! CATGAGTGCACTTCTGAAAC+AGG - 32496:21738-21757 MS.gene041870:intron 45.0%
AAATGTTGCCAGCCACTTGC+AGG - 32496:20436-20455 MS.gene041870:intron 50.0%
AACGAAGAGCTCTGTGGAAC+AGG + 32496:21202-21221 None:intergenic 50.0%
ACTCTTCAAGCAGCAGGACT+TGG - 32496:20740-20759 MS.gene041870:CDS 50.0%
ACTGAACCAGCAGAAATCCC+GGG - 32496:21387-21406 MS.gene041870:intron 50.0%
AGGCTTACCAATGCCTCTCA+TGG - 32496:20781-20800 MS.gene041870:CDS 50.0%
ATGGCACAATCCCAACCTAG+AGG - 32496:21034-21053 MS.gene041870:intron 50.0%
CAACATCGATGTCTCTCCGT+CGG - 32496:21474-21493 MS.gene041870:intron 50.0%
CAGCAGCCACAAACTGTTGA+TGG + 32496:19720-19739 None:intergenic 50.0%
CAGCTGCTGCAAGAGTTTGA+AGG + 32496:20694-20713 None:intergenic 50.0%
CGAGCTCCATCAACAGTTTG+TGG - 32496:19711-19730 MS.gene041870:CDS 50.0%
CTTCAAACTCTTGCAGCAGC+TGG - 32496:20692-20711 MS.gene041870:CDS 50.0%
CTTCCCTGATAATTTCGGGC+AGG - 32496:21708-21727 MS.gene041870:intron 50.0%
CTTGGAGAAGGCTTGGAACA+AGG - 32496:21580-21599 MS.gene041870:intron 50.0%
GACAGTATGTATCCTCACCC+AGG - 32496:19757-19776 MS.gene041870:CDS 50.0%
GAGCAGAAGAAAAGCCCTGA+TGG + 32496:21507-21526 None:intergenic 50.0%
GATTGGGGGATGACAAACCA+AGG - 32496:21409-21428 MS.gene041870:intron 50.0%
GCCCGAAATTATCAGGGAAG+AGG + 32496:21708-21727 None:intergenic 50.0%
GGGCAGTCTACTGTGTCAAA+TGG - 32496:21112-21131 MS.gene041870:CDS 50.0%
GGGTTTACGAGTTCTCGTTG+TGG - 32496:18534-18553 MS.gene041870:intron 50.0%
GTAGTGATGTCTGCCGATGA+TGG - 32496:19376-19395 MS.gene041870:CDS 50.0%
GTATGATACCTGCAAGTGGC+TGG + 32496:20447-20466 None:intergenic 50.0%
GTGCATATGCCAGACATGGA+TGG - 32496:19205-19224 MS.gene041870:CDS 50.0%
GTGCCAAATGATGCCTCTTG+TGG + 32496:20647-20666 None:intergenic 50.0%
GTGGAAAGATACGGAGCAGT+CGG - 32496:19516-19535 MS.gene041870:CDS 50.0%
TAAACCCGCCGGAAACTGAT+CGG + 32496:18521-18540 None:intergenic 50.0%
TCAACAGTTTGTGGCTGCTG+TGG - 32496:19720-19739 MS.gene041870:CDS 50.0%
TGCTGCAGACTGGTGCAAAT+TGG + 32496:20945-20964 None:intergenic 50.0%
TGGAAAGATACGGAGCAGTC+GGG - 32496:19517-19536 MS.gene041870:CDS 50.0%
TTTCCCTGTGTAGCAGAAGC+GGG + 32496:20998-21017 None:intergenic 50.0%
! AAGTCCTGCTGCTTGAAGAG+TGG + 32496:20741-20760 None:intergenic 50.0%
! ATACCTGGAGTGCTTCCAAG+AGG + 32496:21274-21293 None:intergenic 50.0%
! CCCAAGAGGTTCGGTAATCT+TGG + 32496:21094-21113 None:intergenic 50.0%
! TACCTGGAGTGCTTCCAAGA+GGG + 32496:21273-21292 None:intergenic 50.0%
! TTCAAGCAGCAGGACTTGGT+AGG - 32496:20744-20763 MS.gene041870:CDS 50.0%
! TTCTTGCAGCAGGAAGGCAT+TGG - 32496:21853-21872 MS.gene041870:CDS 50.0%
!! AGCCCACAAGAGGCATCATT+TGG - 32496:20641-20660 MS.gene041870:CDS 50.0%
!! CCCTGATGGACTAAAACCGA+CGG + 32496:21493-21512 None:intergenic 50.0%
!! CTTTTGAAGAGTCCTGGGTG+AGG + 32496:19772-19791 None:intergenic 50.0%
!!! CCGTCGGTTTTAGTCCATCA+GGG - 32496:21490-21509 MS.gene041870:intron 50.0%
!!! TCCGTCGGTTTTAGTCCATC+AGG - 32496:21489-21508 MS.gene041870:intron 50.0%
ACACAGTAGACTGCCCCAAG+AGG + 32496:21108-21127 None:intergenic 55.0%
ACCAGCAGAAATCCCGGGAT+TGG - 32496:21392-21411 MS.gene041870:intron 55.0%
ACGAGAACTCGTAAACCCGC+CGG + 32496:18532-18551 None:intergenic 55.0%
AGAGTGGCTAGACTTTGCGC+TGG + 32496:20725-20744 None:intergenic 55.0%
AGCAGAAATCCCGGGATTGG+GGG - 32496:21395-21414 MS.gene041870:intron 55.0%
AGGTTCCGATCAGTTTCCGG+CGG - 32496:18513-18532 MS.gene041870:intron 55.0%
CAGCAGAAATCCCGGGATTG+GGG - 32496:21394-21413 MS.gene041870:intron 55.0%
CCAGCAGAAATCCCGGGATT+GGG - 32496:21393-21412 MS.gene041870:intron 55.0%
CTAGCCACTCTTCAAGCAGC+AGG - 32496:20734-20753 MS.gene041870:CDS 55.0%
GAGTGGCTAGACTTTGCGCT+GGG + 32496:20724-20743 None:intergenic 55.0%
GGTTTGTCATCCCCCAATCC+CGG + 32496:21408-21427 None:intergenic 55.0%
GTAGACTGCCCCAAGAGGTT+CGG + 32496:21103-21122 None:intergenic 55.0%
GTGGCTGCTGTGGATCAACT+AGG - 32496:19730-19749 MS.gene041870:CDS 55.0%
GTTTGTCATCCCCCAATCCC+GGG + 32496:21407-21426 None:intergenic 55.0%
TCGACAGACCAAACAACCCG+AGG + 32496:19694-19713 None:intergenic 55.0%
TTAGTATGGGAGCTCGCGTC+AGG + 32496:21685-21704 None:intergenic 55.0%
TTCCCTGTGTAGCAGAAGCG+GGG + 32496:20997-21016 None:intergenic 55.0%
!! TTCCCTCTTGGAAGCACTCC+AGG - 32496:21268-21287 MS.gene041870:intron 55.0%
AGTCCCCGCTTCTGCTACAC+AGG - 32496:20991-21010 MS.gene041870:intron 60.0%
CAAGGGACTGTGCTGCAGAC+TGG + 32496:20955-20974 None:intergenic 60.0%
CAGTCTGCAGCACAGTCCCT+TGG - 32496:20953-20972 MS.gene041870:CDS 60.0%
CCCAATCCCGGGATTTCTGC+TGG + 32496:21396-21415 None:intergenic 60.0%
CTAGACTTTGCGCTGGGAGC+TGG + 32496:20718-20737 None:intergenic 60.0%
GGTTCCGATCAGTTTCCGGC+GGG - 32496:18514-18533 MS.gene041870:intron 60.0%
GTCCCCGCTTCTGCTACACA+GGG - 32496:20992-21011 MS.gene041870:intron 60.0%
!! CAGTCGGGTAGTGCTGACGA+GGG - 32496:19532-19551 MS.gene041870:CDS 60.0%
!! GCAGTCGGGTAGTGCTGACG+AGG - 32496:19531-19550 MS.gene041870:CDS 65.0%


Chromosome Type Strat End Strand Name
32496 gene 18436 21930 18436 ID=MS.gene041870
32496 mRNA 18436 21930 18436 ID=MS.gene041870.t1;Parent=MS.gene041870
32496 exon 21750 21930 21750 ID=MS.gene041870.t1.exon1;Parent=MS.gene041870.t1
32496 CDS 21750 21930 21750 ID=cds.MS.gene041870.t1;Parent=MS.gene041870.t1
32496 exon 21089 21241 21089 ID=MS.gene041870.t1.exon2;Parent=MS.gene041870.t1
32496 CDS 21089 21241 21089 ID=cds.MS.gene041870.t1;Parent=MS.gene041870.t1
32496 exon 20606 20986 20606 ID=MS.gene041870.t1.exon3;Parent=MS.gene041870.t1
32496 CDS 20606 20986 20606 ID=cds.MS.gene041870.t1;Parent=MS.gene041870.t1
32496 exon 19909 19985 19909 ID=MS.gene041870.t1.exon4;Parent=MS.gene041870.t1
32496 CDS 19909 19985 19909 ID=cds.MS.gene041870.t1;Parent=MS.gene041870.t1
32496 exon 18607 19788 18607 ID=MS.gene041870.t1.exon5;Parent=MS.gene041870.t1
32496 CDS 18607 19788 18607 ID=cds.MS.gene041870.t1;Parent=MS.gene041870.t1
32496 exon 18436 18504 18436 ID=MS.gene041870.t1.exon6;Parent=MS.gene041870.t1
32496 CDS 18436 18504 18436 ID=cds.MS.gene041870.t1;Parent=MS.gene041870.t1
Gene Sequence

>MS.gene041870

ATGATGAATCTAAGCAACAACGGAAAAGGATCAATATCAACTGTTACTTCAACTGCTACTACTATGAAATCCGGTGAAGGTTCCGATCAGTTTCCGGCGGGTTTACGAGTTCTCGTTGTGGATGATGATCCCACGTGTCTTATGATTCTTGAGAAGATGTTGCGCACATGTCTTTATGAAGGTAAAATTTGTTTTTTTCTAACTGAATTTTCACTATCTTTAAGCTTCAATTTCGCTCTGTTCAATTTCAACGCTTAATTACTTGATTAGTTGGACAAAAAAAAAACTAACTTTATCTTCAATTTGAAAAACCCATATGCAAACTATTCAAAAAAATCATTTTTTTTGTATAACTATTTGTTGATCATTTTTTGTCTCAAACAGAATTTGATTTATGAAACAGTAGAATTAATCACGAAGTAAGACCTTTTTTTCTTCTTCTTTGGCTGGTTCAATTTCAGATTTCAAATTATTTTCTCACATCATGAAGTTCATCAATATCTTGTAGCTGAAAAAGCCAGATTTTGATTTTCATTTTGATTCTTTTAGTTTAAAATACCATTGAAACATGGTTTTGAGCTACTGGTTTTCAGATTTGTTTTTGATTTGATTCATCACTTAATTGTTATTATTCAATTGATTTAATTGATTATGAATTTTGAGTGATAATTTTGTTGAGTTCATTTCAGTTACGAAATGCAATCGAGCTGAGACTGCGCTTTCGCTACTCAGAGAGAACAAGAATGGATTTGATATTGTTATTAGTGATGTGCATATGCCAGACATGGATGGATTTAAACTCTTAGAACATATTGGATTGGAAATGGACCTTCCAGTTATTAGTAAGTACTTTGGTTTTTGTTTTGTTTTTTTAGCTTAGATCTGTTAGTAGAGTGTATTGTTACTGAGATTTGAGACTAAAATGTTTTGTATGATGATTGTAGTGATGTCTGCCGATGATGGTAAAAGTGTTGTTATGAAGGGTGTAACACATGGTGCTTGTGATTACTTGATTAAACCTGTTCGTATTGAGGCTTTGAAGAACATATGGCAGCATGTGGTTCGGAAGAAAAAGAACGAGTGGAAAGATACGGAGCAGTCGGGTAGTGCTGACGAGGGAGATCGACATCCAAAAGCATCTGATGATGCTGATTATTCGTCTTCTGCTAATGAAGGAAATTGGAGAAACTCGAGAAAGAGAAGGGATGATGAAGAGGAAGGTGACGATAGAGATGACTCGTCAACACTAAAGAAGCCTCGGGTTGTTTGGTCTGTCGAGCTCCATCAACAGTTTGTGGCTGCTGTGGATCAACTAGGAATTGACAGTATGTATCCTCACCCAGGACTCTTCAAAAGTTTTTTTTTTTCTTTCATCCTTTGTTTTCCGTGCAGATCTATCTAAAAGACTATAATCATTGCATCTAGATTTTGTAGACTATCAACTTGTGTGAATCAATTTTCAAACTATACTAGTCTATAATTTTATGAATAATTAAGATTCAGTTGTGGTTTTACAATTTCAGCAATCAAGTTTCATCCTATTGGTTGGTATCAGAAACCAAATTTTCTTTAAAACCATTTAGCGTATTGTCTTTCTCAATGTTTTTTTCCTACAGTTTCTTAGTTCTCTATCTACCCTAGAAGTTCTACTATTGATTCATTTCTTATTGGATCCTCTATTAGTTCTATAATAGATTGAACTGCTTCAAGGGAGTTTTTTAAATTACAGTTTTATCCTGAATGTATTCATTTTCCGTCATACATTTTTCTTGTATGTTCCATCACAAACCTTAGCAATCTCATCTTGGTTCACCATCCAGTGTTTTTAAAAGAATTATATTTCTGAATTAGTATATTGTCCCTAATATTTGTTTGAGTACCTTAGCTATGAAGTATTGTGGTTATTTTTAGTCTTGCCTGATTCAAGTTTGATATTTCTGCGCAGAGGCTGTTCCCAAAAAAATTCTGGAATTGATGAATGTTCCTGGGCTCACTAGAGAAAATGTTGCCAGCCACTTGCAGGTATCATACTGTTATTCGCCTACTTCAGAAAGGACCCAAGTTAAATTTTATATCCCTATGTTTTCTTGTGGTCATCTAACGGAGGTAACATTTTAATATTATTTTTTTTTTTTGTTACAGAAATATCGATTGTATCTTCGAAGGCTGAGTGGAGTTTCTCAGCACCAGAATAATTCATTTCTCAGCCCACAAGAGGCATCATTTGGCACGATTTCGTCAATGAACGGACTTGACCTTCAAACTCTTGCAGCAGCTGGCCAGCTCCCAGCGCAAAGTCTAGCCACTCTTCAAGCAGCAGGACTTGGTAGGTCAACTGTGAAATCAGGCTTACCAATGCCTCTCATGGATCAAAGGAACCTTTTCAGTTTTGAAAACCCAAGGTTGAGATTTGGAGAAGGGCAACAACAACTTTTGAATGGTAGTAATAATAAACCAACAAATCTTCTTCACGGAGTTCCTACTAACATGGAGCCAAAGCAACTCGCCAATTTGCACCAGTCTGCAGCACAGTCCCTTGGCAACATGAATATGCGAGTCCCCGCTTCTGCTACACAGGGAAATCCCTTATTGATGCAGATGGCACAATCCCAACCTAGAGGTCCAATGCTAAGTGAAAATACTGGTTCTCATGTTCCAAGATTACCGAACCTCTTGGGGCAGTCTACTGTGTCAAATGGAATTTCTGACGGTCTTATGGGGAGAAATAACATGGCTAGTAGCAGTAGAGTGCCTTCGTTTAATCCTGTTCCACAGAGCTCTTCGTTTTTGAATTTTCCCATGAATCAAAGCACTGAAATGTCTGTTAGTAATTTCCCTCTTGGAAGCACTCCAGGTATATCTAGTATCACAACCAAAGGCTCATTTCAAGCCGAAGTTAATTCGGGAATTAAAGGATCAGCTGGATTTCCAAGTTATGATATTTTTAACGAACTGAACCAGCAGAAATCCCGGGATTGGGGGATGACAAACCAAGGTCTAACATATGATTCCTCATCGCATGCAAATCCTTTACATGGCAACATCGATGTCTCTCCGTCGGTTTTAGTCCATCAGGGCTTTTCTTCTGCTCAACAAACCGGACATAGCAGAGATGCTTCTTTGCTTGGAAAATCTCCTTTCTCTCTTGGAGAAGGCTTGGAACAAGGTAATCTCCAAAATGGTGGCAGTCAACATTTCAATCCTCTTTATGTTGAAAATTCAACAAGGGTTAAGGCTGAAAGAGTTCCTGACGCGAGCTCCCATACTAACCTCTTCCCTGATAATTTCGGGCAGGATGATCTCATGAGTGCACTTCTGAAACAGGTCTGTCGTCTCATAATTCATTCTTTCTATGGATTCAAAATATTCATATGCTTGCATATACTTTTTCCATTACAAACAAATCATTTTTTGTGTTTCTTGCAGCAGGAAGGCATTGGACGCGAGAATGAGTTTGACTTTGACGGGTATTCTCTGGACAACATTCCTGTCTAG
Protein sequence

>MS.gene041870.t1

MMNLSNNGKGSISTVTSTATTMKSGEGSDQFPAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETALSLLRENKNGFDIVISDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGKSVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKKKNEWKDTEQSGSADEGDRHPKASDDADYSSSANEGNWRNSRKRRDDEEEGDDRDDSSTLKKPRVVWSVELHQQFVAAVDQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHQNNSFLSPQEASFGTISSMNGLDLQTLAAAGQLPAQSLATLQAAGLGRSTVKSGLPMPLMDQRNLFSFENPRLRFGEGQQQLLNGSNNKPTNLLHGVPTNMEPKQLANLHQSAAQSLGNMNMRVPASATQGNPLLMQMAQSQPRGPMLSENTGSHVPRLPNLLGQSTVSNGISDGLMGRNNMASSSRVPSFNPVPQSSSFLNFPMNQSTEMSVSNFPLGSTPGISSITTKGSFQAEVNSGIKGSAGFPSYDIFNELNQQKSRDWGMTNQGLTYDSSSHANPLHGNIDVSPSVLVHQGFSSAQQTGHSRDASLLGKSPFSLGEGLEQGNLQNGGSQHFNPLYVENSTRVKAERVPDASSHTNLFPDNFGQDDLMSALLKQQEGIGRENEFDFDGYSLDNIPV