AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene002678

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene002678.t1 MTR_2g018290 97.196 535 12 3 1 534 1 533 0.0 1057
MS.gene002678.t1 MTR_7g108420 73.536 427 90 3 113 534 1 409 0.0 625
MS.gene002678.t1 MTR_5g030950 57.700 487 190 4 62 533 23 508 0.0 573
MS.gene002678.t1 MTR_5g067060 58.772 456 175 3 88 533 45 497 0.0 563
MS.gene002678.t1 MTR_3g084310 59.389 458 166 6 88 533 12 461 0.0 545
MS.gene002678.t1 MTR_8g081510 57.642 458 174 5 88 533 12 461 0.0 537
MS.gene002678.t1 MTR_2g006570 51.820 467 204 5 82 533 130 590 1.63e-166 485
MS.gene002678.t1 MTR_3g084310 63.533 351 114 3 88 426 12 360 2.04e-160 461
MS.gene002678.t1 MTR_3g073470 47.879 495 225 7 60 533 92 574 1.26e-157 462
MS.gene002678.t1 MTR_2g006570 51.059 425 187 5 124 533 1 419 2.43e-149 435
MS.gene002678.t1 MTR_1g073580 48.136 295 84 7 232 526 1 226 9.16e-70 224
MS.gene002678.t1 MTR_3g062030 86.957 92 8 1 328 419 1 88 7.91e-46 160
MS.gene002678.t1 MTR_7g070020 86.301 73 3 1 402 467 1 73 4.48e-32 119
MS.gene002678.t1 MTR_1g070415 62.921 89 33 0 438 526 23 111 4.63e-31 117
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene002678.t1 AT4G32520 73.519 540 121 6 4 534 3 529 0.0 799
MS.gene002678.t1 AT4G32520 73.519 540 121 6 4 534 3 529 0.0 799
MS.gene002678.t1 AT4G37930 59.477 459 175 3 84 533 51 507 0.0 578
MS.gene002678.t1 AT5G26780 59.607 458 176 2 84 533 51 507 0.0 570
MS.gene002678.t1 AT5G26780 59.607 458 176 2 84 533 51 507 0.0 570
MS.gene002678.t1 AT5G26780 57.595 474 176 3 84 533 51 523 0.0 560
MS.gene002678.t1 AT5G26780 57.595 474 176 3 84 533 51 523 0.0 560
MS.gene002678.t1 AT4G13930 58.065 465 175 5 81 533 5 461 0.0 542
MS.gene002678.t1 AT4G13890 54.957 464 189 6 80 533 8 461 0.0 523
MS.gene002678.t1 AT4G13890 60.052 388 141 4 80 457 8 391 5.14e-170 486
MS.gene002678.t1 AT1G22020 51.410 461 203 3 88 533 142 596 1.49e-166 485
MS.gene002678.t1 AT1G22020 51.410 461 203 3 88 533 142 596 1.49e-166 485
MS.gene002678.t1 AT1G36370 48.207 502 235 5 47 533 101 592 1.52e-159 467

Find 127 sgRNAs with CRISPR-Local

Find 280 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTTACATGTAAGGTATTA+TGG 0.211657 2.1:+68369074 MS.gene002678:intron
TCTCTTCATGAAGCAACTTT+TGG 0.244672 2.1:+68367818 MS.gene002678:CDS
CATGGATATAAACTGGTTTC+TGG 0.273004 2.1:+68370553 MS.gene002678:CDS
TGTTCCTGAGACCAAACTTT+TGG 0.281834 2.1:-68371371 None:intergenic
CGGAAGGTTTGCCGGGTAAA+AGG 0.292672 2.1:+68368960 MS.gene002678:CDS
GGATCTAGCTTCTTGGACTA+TGG 0.313167 2.1:+68368791 MS.gene002678:CDS
AGTCCTCTTGTTGTCATTGC+TGG 0.320405 2.1:-68371283 None:intergenic
TGAAATGAAGTTGAGGTAAA+AGG 0.321492 2.1:-68367760 None:intergenic
GTAAATGTTCAACCATTATC+TGG 0.330824 2.1:+68369182 MS.gene002678:CDS
GTTAGCTCCTGAATTTCCTT+TGG 0.331098 2.1:+68371420 MS.gene002678:CDS
GACAAGAGTGCCCTGGTTCC+CGG 0.331923 2.1:+68371241 MS.gene002678:CDS
GAGACAAGGTTTCAAATTTA+CGG 0.334833 2.1:+68371443 MS.gene002678:CDS
TTGTCTCCCAAAGGAAATTC+AGG 0.356751 2.1:-68371427 None:intergenic
TTAGCTCCTGAATTTCCTTT+GGG 0.358906 2.1:+68371421 MS.gene002678:CDS
CATGTCCTTTAGGGTATTGA+TGG 0.361577 2.1:+68370831 MS.gene002678:intron
GCTTGAAATGATTACTGTTA+TGG 0.362788 2.1:-68367784 None:intergenic
GACATCACTATACCTGGTTT+TGG 0.362836 2.1:-68370414 None:intergenic
CAGGGTTTGGATTTGCCTCA+TGG 0.367504 2.1:+68369347 MS.gene002678:intron
CAGGTACTCGGAAGGTTTGC+CGG 0.379231 2.1:+68368952 MS.gene002678:CDS
CGACCAAAACTCATTATTGC+TGG 0.387419 2.1:+68369613 MS.gene002678:CDS
TTGGCTGCATTTCATCTAGA+TGG 0.389212 2.1:+68369146 MS.gene002678:CDS
AGTTGAGCATGGATATAAAC+TGG 0.395755 2.1:+68370546 MS.gene002678:CDS
GCACCAGCAATAATGAGTTT+TGG 0.396589 2.1:-68369616 None:intergenic
TTCATGAAGAGATACTTTGC+AGG 0.398932 2.1:-68367807 None:intergenic
TTAATTATGGCATGAACATC+AGG 0.399990 2.1:-68368830 None:intergenic
TAAGATTAGACTCCGGGAAT+AGG 0.400101 2.1:-68371496 None:intergenic
AAGTCTTGAAGCCAAAAGTT+TGG 0.403698 2.1:+68371360 MS.gene002678:CDS
ACAGCTAAAAGACGTGTATC+AGG 0.403874 2.1:+68369395 MS.gene002678:CDS
AGTAGGTGCGTTTCTGATGA+TGG 0.415251 2.1:+68369808 MS.gene002678:CDS
TAAACCACATGATCGTATAA+TGG 0.415625 2.1:+68369241 MS.gene002678:CDS
TGCGGATGCCTCCGGGAACC+AGG 0.419322 2.1:-68371252 None:intergenic
TGAACCGATGCGGATGCCTC+CGG 0.423228 2.1:-68371260 None:intergenic
TATATCCATGCTCAACTAAC+CGG 0.429922 2.1:-68370540 None:intergenic
AGGGTTTGGATTTGCCTCAT+GGG 0.431845 2.1:+68369348 MS.gene002678:intron
GCTACTCAGTATCCTATTCC+CGG 0.433881 2.1:+68371484 MS.gene002678:CDS
AAGCTTCATAATTTCTCTCA+TGG 0.442791 2.1:+68367734 MS.gene002678:CDS
TGCTGTGCATGGAGTTGATC+TGG 0.443884 2.1:+68370131 MS.gene002678:CDS
CCTCCAATTGTATGGTTATG+AGG 0.444453 2.1:-68370343 None:intergenic
TTGGTTCATGCCTCACAAAC+AGG 0.446380 2.1:+68368933 MS.gene002678:CDS
GTTCAAGACTTCTGAATTGA+CGG 0.454529 2.1:-68368865 None:intergenic
GGGTTTGGATTTGCCTCATG+GGG 0.466783 2.1:+68369349 MS.gene002678:intron
ACTGTAGAGCTCTTGCTAAC+CGG 0.468226 2.1:+68370521 MS.gene002678:CDS
TGCCATAATTAACAAGGAAA+AGG 0.471108 2.1:+68368841 MS.gene002678:CDS
GAAGCCAAAAGTTTGGTCTC+AGG 0.473679 2.1:+68371367 MS.gene002678:CDS
CTGCTAGTCCTCCAATTGTA+TGG 0.473680 2.1:-68370351 None:intergenic
AGGTGATGGATCTAGCTTCT+TGG 0.473982 2.1:+68368784 MS.gene002678:intron
AGCAAGTAAGATTAGACTCC+GGG 0.474277 2.1:-68371502 None:intergenic
TTAGCCGGGGAACCAGATAA+TGG 0.480349 2.1:-68369194 None:intergenic
ATGCAGCCAATGCCCTTTGT+TGG 0.480401 2.1:-68369133 None:intergenic
AGGCACTGAATTCTTGTTGA+GGG 0.480460 2.1:-68370892 None:intergenic
AAGGCAAACCTTGTGGGTTG+TGG 0.484488 2.1:-68369906 None:intergenic
GTGTATGCTGCAAAATTAGC+CGG 0.484634 2.1:-68369209 None:intergenic
GGTCCTCATAACCATACAAT+TGG 0.485363 2.1:+68370340 MS.gene002678:CDS
ATGGATATGGCTCACGTAAG+TGG 0.485774 2.1:+68369827 MS.gene002678:CDS
CACAATATCAACAAACTCAA+AGG 0.487808 2.1:-68369879 None:intergenic
AGGGAGAGAAGAAGGAGAAG+AGG 0.491682 2.1:-68367861 None:intergenic
TGTTATTGATTATGATATGT+TGG 0.493518 2.1:+68369570 MS.gene002678:CDS
TATCTCAAGGCAAACCTTGT+GGG 0.496905 2.1:-68369912 None:intergenic
AGGTACTCGGAAGGTTTGCC+GGG 0.499896 2.1:+68368953 MS.gene002678:CDS
TGCGTTTCTGATGATGGATA+TGG 0.504349 2.1:+68369814 MS.gene002678:CDS
AGTGGAGTTGCATCAATGAT+AGG 0.508144 2.1:+68367680 MS.gene002678:CDS
ACGATGCCTGCGGCGTGTAG+TGG 0.514693 2.1:+68367662 None:intergenic
GAACCGATGCGGATGCCTCC+GGG 0.516515 2.1:-68371259 None:intergenic
TGAATTTCCTTTGGGAGACA+AGG 0.521416 2.1:+68371429 MS.gene002678:CDS
GTGGATTCATCAAGTCGATA+AGG 0.522073 2.1:-68369443 None:intergenic
CCAATGCCCTTTGTTGGCAT+AGG 0.522830 2.1:-68369127 None:intergenic
ACAATATCAACAAACTCAAA+GGG 0.525909 2.1:-68369878 None:intergenic
TCCAAATTTACCTGTAGACC+AGG 0.526112 2.1:-68370180 None:intergenic
CGAAATCCTATGCCAACAAA+GGG 0.528808 2.1:+68369121 MS.gene002678:CDS
GACTTCCTCCAGTCTTTGAG+AGG 0.535766 2.1:+68370075 MS.gene002678:intron
CCTCATAACCATACAATTGG+AGG 0.537010 2.1:+68370343 MS.gene002678:CDS
TCAACCATTATCTGGTTCCC+CGG 0.537768 2.1:+68369190 MS.gene002678:CDS
ACCTGGTTCTTGTTGATCTG+AGG 0.546425 2.1:+68370590 MS.gene002678:CDS
TGGATATGGCTCACGTAAGT+GGG 0.546881 2.1:+68369828 MS.gene002678:CDS
TCATGAAGAGATACTTTGCA+GGG 0.549031 2.1:-68367806 None:intergenic
TCGAAATCCTATGCCAACAA+AGG 0.549476 2.1:+68369120 MS.gene002678:CDS
TGTATGCTGCAAAATTAGCC+GGG 0.549629 2.1:-68369208 None:intergenic
AAGAATATCATACCACCTCT+AGG 0.550750 2.1:-68370099 None:intergenic
CTCAACAAGAATTCAGTGCC+TGG 0.552025 2.1:+68370894 MS.gene002678:CDS
CAGGCACTGAATTCTTGTTG+AGG 0.558355 2.1:-68370893 None:intergenic
TTCATCAAGTCGATAAGGCA+TGG 0.561368 2.1:-68369438 None:intergenic
GCGGATGCCTCCGGGAACCA+GGG 0.563617 2.1:-68371251 None:intergenic
TTCAAGAAAGATGCTGTGCA+TGG 0.563986 2.1:+68370120 MS.gene002678:CDS
GCAACTCCACTACACGCCGC+AGG 0.573421 2.1:-68367668 None:intergenic
CCTATGCCAACAAAGGGCAT+TGG 0.576114 2.1:+68369127 MS.gene002678:CDS
GCAATGACAACAAGAGGACT+TGG 0.577675 2.1:+68371286 MS.gene002678:CDS
GTTCCCGGAGGCATCCGCAT+CGG 0.582687 2.1:+68371256 MS.gene002678:CDS
ATGCCTCACAAACAGGTACT+CGG 0.582902 2.1:+68368940 MS.gene002678:CDS
TCATCTAGATGGTAACAAGT+GGG 0.583625 2.1:+68369157 MS.gene002678:CDS
TGAAAGATTGCAGATTCAGT+AGG 0.585640 2.1:+68369791 MS.gene002678:intron
GCTAACCGGTTAGTTGAGCA+TGG 0.590724 2.1:+68370535 MS.gene002678:CDS
TGGCGGTAGTGATAATCACC+TGG 0.591392 2.1:+68370573 MS.gene002678:CDS
TTTACCATTATACGATCATG+TGG 0.592593 2.1:-68369245 None:intergenic
TTTGAAACCTTGTCTCCCAA+AGG 0.596246 2.1:-68371436 None:intergenic
GCAAACCTTGTGGGTTGTGG+TGG 0.598562 2.1:-68369903 None:intergenic
GGGTATTGATGGTGCTCGTG+TGG 0.599771 2.1:+68370842 MS.gene002678:intron
AAGTTTGGTCTCAGGAACAA+AGG 0.601314 2.1:+68371375 MS.gene002678:CDS
TGAAGCTTAGTCGAAGAAAG+AGG 0.601979 2.1:-68367719 None:intergenic
TATCGACTTGATGAATCCAC+AGG 0.605117 2.1:+68369446 MS.gene002678:CDS
TCACCAGCAATGACAACAAG+AGG 0.607582 2.1:+68371280 MS.gene002678:CDS
CTTCCGAGTACCTGTTTGTG+AGG 0.608482 2.1:-68368943 None:intergenic
TTCATCTAGATGGTAACAAG+TGG 0.609676 2.1:+68369156 MS.gene002678:CDS
AAGCAAGTAAGATTAGACTC+CGG 0.610878 2.1:-68371503 None:intergenic
GCCTCAGATCAACAAGAACC+AGG 0.611769 2.1:-68370591 None:intergenic
AAAAGGTGACAAGAGTGCCC+TGG 0.613809 2.1:+68371234 MS.gene002678:intron
TGTTCATGCCATAATTAACA+AGG 0.614939 2.1:+68368835 MS.gene002678:CDS
GGTTTGGATTTGCCTCATGG+GGG 0.619577 2.1:+68369350 MS.gene002678:CDS
CAGTCTTTGAGAGGTCCTAG+AGG 0.623014 2.1:+68370084 MS.gene002678:intron
AATTGCAGACATAATTCATG+AGG 0.628744 2.1:+68371327 MS.gene002678:CDS
AAGGCAGTGATGGAAGCAGT+TGG 0.639750 2.1:+68368914 MS.gene002678:CDS
AATGTCTCGAGGATAAGCAC+TGG 0.642731 2.1:-68369638 None:intergenic
ACAAGGTTTCAAATTTACGG+AGG 0.643904 2.1:+68371446 MS.gene002678:CDS
CTTCATAATTTCTCTCATGG+AGG 0.646645 2.1:+68367737 MS.gene002678:CDS
CATCTAGATGGTAACAAGTG+GGG 0.651752 2.1:+68369158 MS.gene002678:CDS
TGTGACCACCACAACCCACA+AGG 0.658566 2.1:+68369898 MS.gene002678:CDS
TTACATGTAAGGTATTATGG+TGG 0.660596 2.1:+68369077 MS.gene002678:intron
TTATGGTTGAAATGAAGTTG+AGG 0.663071 2.1:-68367767 None:intergenic
CTCACAAACAGGTACTCGGA+AGG 0.671763 2.1:+68368944 MS.gene002678:CDS
CGGGCATAATCAATGTCTCG+AGG 0.674256 2.1:-68369649 None:intergenic
TCTTTGAGAGGTCCTAGAGG+TGG 0.677857 2.1:+68370087 MS.gene002678:CDS
GGATATAAACTGGTTTCTGG+CGG 0.678188 2.1:+68370556 MS.gene002678:CDS
ATTGCAGACATAATTCATGA+GGG 0.683084 2.1:+68371328 MS.gene002678:CDS
GTATGCTGCAAAATTAGCCG+GGG 0.694478 2.1:-68369207 None:intergenic
CTAATCCATAACGATGCCTG+CGG 0.695014 2.1:+68367652 None:intergenic
AAGAGTGCCCTGGTTCCCGG+AGG 0.704318 2.1:+68371244 MS.gene002678:CDS
AGCTTAGTCGAAGAAAGAGG+TGG 0.704887 2.1:-68367716 None:intergenic
TCATTGCTGGTGAACCGATG+CGG 0.745962 2.1:-68371270 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAAAAAGAAATTGAAT+GGG - chr2.1:68371085-68371104 None:intergenic 10.0%
!! ATGCATATATATTTAAATTT+CGG - chr2.1:68368716-68368735 None:intergenic 10.0%
!! TATAAAAAAAAGAAATTGAA+TGG - chr2.1:68371086-68371105 None:intergenic 10.0%
!! AAAAACAACTTATAACTTAT+CGG - chr2.1:68368280-68368299 None:intergenic 15.0%
!! AATAGAATCAAAAAATGAAA+TGG - chr2.1:68367920-68367939 None:intergenic 15.0%
!! ACATGTATAATAAATATAGA+TGG - chr2.1:68368080-68368099 None:intergenic 15.0%
!!! AAGTCACTTTTTTTTATAAT+TGG + chr2.1:68368372-68368391 MS.gene002678:intron 15.0%
!!! CCTTATTTCTAAAAAAAATT+GGG - chr2.1:68370681-68370700 None:intergenic 15.0%
!!! GTTTGCTTTTTTTTTTTTTT+TGG + chr2.1:68369980-68369999 MS.gene002678:intron 15.0%
!!! TATTTTTAACTCTCTAAAAT+TGG - chr2.1:68371141-68371160 None:intergenic 15.0%
!!! TCCTTATTTCTAAAAAAAAT+TGG - chr2.1:68370682-68370701 None:intergenic 15.0%
!! ACTAATTTCGATAAATTCTT+CGG - chr2.1:68368416-68368435 None:intergenic 20.0%
!! ATAATACCTTACATGTAAAT+GGG - chr2.1:68369075-68369094 None:intergenic 20.0%
!! ATATAATGATAATTCTGTCT+TGG + chr2.1:68370646-68370665 MS.gene002678:intron 20.0%
!! CAATTCTATCAAAAAGAAAA+AGG - chr2.1:68370948-68370967 None:intergenic 20.0%
!! CTATATTAAAATCACAAACT+AGG - chr2.1:68370302-68370321 None:intergenic 20.0%
!! GTTAAAAAAGAACTAATTAG+AGG - chr2.1:68370210-68370229 None:intergenic 20.0%
!! TAAAATCGTTTCAGATATAT+TGG + chr2.1:68369486-68369505 MS.gene002678:intron 20.0%
!! TTTAAATATATATGCATGCT+TGG + chr2.1:68368719-68368738 MS.gene002678:intron 20.0%
!!! AGTTGTTTTTATTTATAAGC+TGG + chr2.1:68368290-68368309 MS.gene002678:intron 20.0%
!!! ATTAAGTTGTTTATGAAAAC+AGG - chr2.1:68368162-68368181 None:intergenic 20.0%
!!! ATTTTTACTTCTCTAGAAAT+AGG + chr2.1:68368996-68369015 MS.gene002678:intron 20.0%
!!! CCCAATTTTTTTTAGAAATA+AGG + chr2.1:68370678-68370697 MS.gene002678:intron 20.0%
!!! TAGTTCTTTTTTAACTATTC+TGG + chr2.1:68370215-68370234 MS.gene002678:intron 20.0%
!!! TATGTATCAGTCTTTTATTT+TGG + chr2.1:68368105-68368124 MS.gene002678:intron 20.0%
!!! TGTATTTTTTTTATCTCCTT+TGG + chr2.1:68368615-68368634 MS.gene002678:intron 20.0%
!!! TGTTATTGATTATGATATGT+TGG + chr2.1:68369570-68369589 MS.gene002678:CDS 20.0%
!!! TTAAGTTGTTTATGAAAACA+GGG - chr2.1:68368161-68368180 None:intergenic 20.0%
!!! TTTCTTTTTGATAGAATTGA+GGG + chr2.1:68370949-68370968 MS.gene002678:intron 20.0%
!!! TTTTAAAAATTACCAAAACC+AGG + chr2.1:68370402-68370421 MS.gene002678:CDS 20.0%
!!! TTTTACTAATTTATCTAGCT+CGG + chr2.1:68368052-68368071 MS.gene002678:intron 20.0%
!!! TTTTCTTTTTGATAGAATTG+AGG + chr2.1:68370948-68370967 MS.gene002678:intron 20.0%
! AAATAAGCAAAAATGCTAAG+CGG - chr2.1:68371180-68371199 None:intergenic 25.0%
! AAGAAAACACAAATATCTCA+AGG - chr2.1:68369928-68369947 None:intergenic 25.0%
! AATTAGTTGAAATCAGCTTA+TGG + chr2.1:68368429-68368448 MS.gene002678:intron 25.0%
! ACAATATCAACAAACTCAAA+GGG - chr2.1:68369881-68369900 None:intergenic 25.0%
! ATGTAATTAGCTATTTGTGA+AGG - chr2.1:68369758-68369777 None:intergenic 25.0%
! ATTAAAATCACAAACTAGGA+AGG - chr2.1:68370298-68370317 None:intergenic 25.0%
! CATAATACCTTACATGTAAA+TGG - chr2.1:68369076-68369095 None:intergenic 25.0%
! CATGTGCTAATTATTACAAA+AGG + chr2.1:68371217-68371236 MS.gene002678:intron 25.0%
! GAATTCAGATATATATTGAC+AGG - chr2.1:68368680-68368699 None:intergenic 25.0%
! TTTACTTGAAGTTATGAAGT+CGG + chr2.1:68370021-68370040 MS.gene002678:intron 25.0%
!! AATATAGTGAAGAATTTTCC+AGG + chr2.1:68370315-68370334 MS.gene002678:intron 25.0%
!! ATAAGAATTTACCTTTTACC+CGG - chr2.1:68368974-68368993 None:intergenic 25.0%
!! ATATAGTGAAGAATTTTCCA+GGG + chr2.1:68370316-68370335 MS.gene002678:intron 25.0%
!! CATTTACATGTAAGGTATTA+TGG + chr2.1:68369074-68369093 MS.gene002678:intron 25.0%
!! TCTTTCTTTTCAATTTTGAG+TGG - chr2.1:68369960-68369979 None:intergenic 25.0%
!! TTTCTAAAAAAAATTGGGCA+CGG - chr2.1:68370676-68370695 None:intergenic 25.0%
!! TTTTTCACATTGTCATACTT+GGG - chr2.1:68368555-68368574 None:intergenic 25.0%
!!! AATTTACCTCCAATTTTTTG+AGG - chr2.1:68367884-68367903 None:intergenic 25.0%
!!! ATTTACCTCCAATTTTTTGA+GGG - chr2.1:68367883-68367902 None:intergenic 25.0%
!!! GTGTTTTTTAGTGTGAAAAT+AGG + chr2.1:68370748-68370767 MS.gene002678:intron 25.0%
!!! TATGTGCTATTTCAAATATC+AGG + chr2.1:68368764-68368783 MS.gene002678:intron 25.0%
!!! TTCTGAGAATTTTACATCTA+AGG + chr2.1:68368895-68368914 MS.gene002678:CDS 25.0%
AACTCTAACCAATGATGAAA+AGG - chr2.1:68370440-68370459 None:intergenic 30.0%
AAGCTTCATAATTTCTCTCA+TGG + chr2.1:68367734-68367753 MS.gene002678:CDS 30.0%
AATAAGCAAAAATGCTAAGC+GGG - chr2.1:68371179-68371198 None:intergenic 30.0%
AATCAACAAATTTGCAGAAG+AGG - chr2.1:68369048-68369067 None:intergenic 30.0%
AATTGCAGACATAATTCATG+AGG + chr2.1:68371327-68371346 MS.gene002678:CDS 30.0%
ACAACTTATAACTTATCGGA+AGG - chr2.1:68368276-68368295 None:intergenic 30.0%
ACTCTAACCAATGATGAAAA+GGG - chr2.1:68370439-68370458 None:intergenic 30.0%
AGGAAAAACAGCATTGTTAA+TGG - chr2.1:68370163-68370182 None:intergenic 30.0%
ATAAATGCATCTGACTCAAT+AGG - chr2.1:68370267-68370286 None:intergenic 30.0%
ATCAACAAATTTGCAGAAGA+GGG - chr2.1:68369047-68369066 None:intergenic 30.0%
ATGTGTAATGATATGTTACC+AGG + chr2.1:68369328-68369347 MS.gene002678:intron 30.0%
ATTGCAGACATAATTCATGA+GGG + chr2.1:68371328-68371347 MS.gene002678:CDS 30.0%
CACAATATCAACAAACTCAA+AGG - chr2.1:68369882-68369901 None:intergenic 30.0%
CTAGTAAATTTGTCATAAGC+TGG + chr2.1:68368453-68368472 MS.gene002678:intron 30.0%
CTATTTCAAATATCAGGTGA+TGG + chr2.1:68368770-68368789 MS.gene002678:intron 30.0%
GAGACAAGGTTTCAAATTTA+CGG + chr2.1:68371443-68371462 MS.gene002678:CDS 30.0%
GCTTATTTGTGGAATAACTT+GGG + chr2.1:68369508-68369527 MS.gene002678:intron 30.0%
GCTTGAAATGATTACTGTTA+TGG - chr2.1:68367787-68367806 None:intergenic 30.0%
GTAAATGTTCAACCATTATC+TGG + chr2.1:68369182-68369201 MS.gene002678:CDS 30.0%
TAAACCACATGATCGTATAA+TGG + chr2.1:68369241-68369260 MS.gene002678:CDS 30.0%
TATGTGAAATATAGTCAGTG+AGG - chr2.1:68370810-68370829 None:intergenic 30.0%
TCAAATAAGTCGATCAAAAC+TGG + chr2.1:68368528-68368547 MS.gene002678:intron 30.0%
TCAGATATATATTGACAGGA+TGG - chr2.1:68368676-68368695 None:intergenic 30.0%
TCGATAAATTCTTCGGTATA+GGG - chr2.1:68368409-68368428 None:intergenic 30.0%
TGAAATGAAGTTGAGGTAAA+AGG - chr2.1:68367763-68367782 None:intergenic 30.0%
TGCCATAATTAACAAGGAAA+AGG + chr2.1:68368841-68368860 MS.gene002678:CDS 30.0%
TGTGGAAAAAATTCTTGACA+TGG + chr2.1:68370860-68370879 MS.gene002678:CDS 30.0%
TGTGTAATGATATGTTACCA+GGG + chr2.1:68369329-68369348 MS.gene002678:intron 30.0%
TGTTCATGCCATAATTAACA+AGG + chr2.1:68368835-68368854 MS.gene002678:CDS 30.0%
TTAATTATGGCATGAACATC+AGG - chr2.1:68368833-68368852 None:intergenic 30.0%
TTATGGTTGAAATGAAGTTG+AGG - chr2.1:68367770-68367789 None:intergenic 30.0%
TTCACATATCATGTCCTTTA+GGG + chr2.1:68370822-68370841 MS.gene002678:intron 30.0%
TTCGATAAATTCTTCGGTAT+AGG - chr2.1:68368410-68368429 None:intergenic 30.0%
TTTACCATTATACGATCATG+TGG - chr2.1:68369248-68369267 None:intergenic 30.0%
TTTCACATATCATGTCCTTT+AGG + chr2.1:68370821-68370840 MS.gene002678:intron 30.0%
! ATCAAAATCGACTTCCAATT+TGG - chr2.1:68369301-68369320 None:intergenic 30.0%
! GTCCTTTTCCTTGTTAATTA+TGG - chr2.1:68368846-68368865 None:intergenic 30.0%
! GTTTTTCACATTGTCATACT+TGG - chr2.1:68368556-68368575 None:intergenic 30.0%
! TATAGTGAAGAATTTTCCAG+GGG + chr2.1:68370317-68370336 MS.gene002678:intron 30.0%
! TTACATGTAAGGTATTATGG+TGG + chr2.1:68369077-68369096 MS.gene002678:intron 30.0%
! TTCTAAAAAAAATTGGGCAC+GGG - chr2.1:68370675-68370694 None:intergenic 30.0%
! TTTTCACATTGTCATACTTG+GGG - chr2.1:68368554-68368573 None:intergenic 30.0%
!! ATTTTACTCAAAGCACTTCT+GGG + chr2.1:68368581-68368600 MS.gene002678:intron 30.0%
!! CAGAACATACTTTTCTAAAG+CGG - chr2.1:68369672-68369691 None:intergenic 30.0%
!! CAGATATATTGGCTTATTTG+TGG + chr2.1:68369497-68369516 MS.gene002678:intron 30.0%
!! TATTTTACTCAAAGCACTTC+TGG + chr2.1:68368580-68368599 MS.gene002678:intron 30.0%
!! TCTTCTGCAAATTTGTTGAT+TGG + chr2.1:68369047-68369066 MS.gene002678:intron 30.0%
!!! AGAACATACTTTTCTAAAGC+GGG - chr2.1:68369671-68369690 None:intergenic 30.0%
!!! ATTAACAATGCTGTTTTTCC+TGG + chr2.1:68370162-68370181 MS.gene002678:CDS 30.0%
!!! TTTTTTTCTTTCACCCACTT+TGG + chr2.1:68369535-68369554 MS.gene002678:intron 30.0%
AAGAATATCATACCACCTCT+AGG - chr2.1:68370102-68370121 None:intergenic 35.0%
AAGTCTTGAAGCCAAAAGTT+TGG + chr2.1:68371360-68371379 MS.gene002678:CDS 35.0%
AATGAAAAATGACTCCACAC+CGG - chr2.1:68370982-68371001 None:intergenic 35.0%
AATGATATGTTACCAGGGTT+TGG + chr2.1:68369334-68369353 MS.gene002678:intron 35.0%
ACAAGGTTTCAAATTTACGG+AGG + chr2.1:68371446-68371465 MS.gene002678:CDS 35.0%
AGTTGAGCATGGATATAAAC+TGG + chr2.1:68370546-68370565 MS.gene002678:CDS 35.0%
ATAATGACACTTGACACCAA+AGG - chr2.1:68368634-68368653 None:intergenic 35.0%
ATCTGACTCAATAGGTACAT+AGG - chr2.1:68370259-68370278 None:intergenic 35.0%
ATTGTTAGACACTGTAACGA+AGG - chr2.1:68367961-68367980 None:intergenic 35.0%
ATTTGCAGAAGAGGGAAAAA+AGG - chr2.1:68369039-68369058 None:intergenic 35.0%
CGTTACAGTGTCTAACAATT+AGG + chr2.1:68367962-68367981 MS.gene002678:intron 35.0%
CTTCATAATTTCTCTCATGG+AGG + chr2.1:68367737-68367756 MS.gene002678:CDS 35.0%
GGCTTATTTGTGGAATAACT+TGG + chr2.1:68369507-68369526 MS.gene002678:intron 35.0%
GTTCAAGACTTCTGAATTGA+CGG - chr2.1:68368868-68368887 None:intergenic 35.0%
TATATCCATGCTCAACTAAC+CGG - chr2.1:68370543-68370562 None:intergenic 35.0%
TCATCTAGATGGTAACAAGT+GGG + chr2.1:68369157-68369176 MS.gene002678:CDS 35.0%
TCATGAAGAGATACTTTGCA+GGG - chr2.1:68367809-68367828 None:intergenic 35.0%
TCTTCTCTCCCTCAAAAAAT+TGG + chr2.1:68367872-68367891 MS.gene002678:CDS 35.0%
TGAAAGATTGCAGATTCAGT+AGG + chr2.1:68369791-68369810 MS.gene002678:intron 35.0%
TGACAAAATATAAGCACCTG+TGG - chr2.1:68369465-68369484 None:intergenic 35.0%
TGTAGTGCTATGTAAATTGC+TGG + chr2.1:68370724-68370743 MS.gene002678:intron 35.0%
TTAGCTCCTGAATTTCCTTT+GGG + chr2.1:68371421-68371440 MS.gene002678:CDS 35.0%
TTCATCTAGATGGTAACAAG+TGG + chr2.1:68369156-68369175 MS.gene002678:CDS 35.0%
TTCATGAAGAGATACTTTGC+AGG - chr2.1:68367810-68367829 None:intergenic 35.0%
TTGGATCCCATTTACATGTA+AGG + chr2.1:68369066-68369085 MS.gene002678:intron 35.0%
TTGTTAGACACTGTAACGAA+GGG - chr2.1:68367960-68367979 None:intergenic 35.0%
! ACCTGTTTTCATTCCAAAGT+GGG - chr2.1:68369551-68369570 None:intergenic 35.0%
! ATAGTCAGTGAGGTACTAAA+AGG - chr2.1:68370800-68370819 None:intergenic 35.0%
! ATAGTGAAGAATTTTCCAGG+GGG + chr2.1:68370318-68370337 MS.gene002678:intron 35.0%
! ATGGGAATCTAAAATTCCCA+TGG - chr2.1:68371067-68371086 None:intergenic 35.0%
! ATTTTTCTCACACGTTAGCT+TGG + chr2.1:68369270-68369289 MS.gene002678:intron 35.0%
! CATGGATATAAACTGGTTTC+TGG + chr2.1:68370553-68370572 MS.gene002678:CDS 35.0%
! CTCTTCATGAAGCAACTTTT+GGG + chr2.1:68367819-68367838 MS.gene002678:CDS 35.0%
! TCTCTTCATGAAGCAACTTT+TGG + chr2.1:68367818-68367837 MS.gene002678:CDS 35.0%
! TTGGTGATCTTTCTTGTTCA+TGG + chr2.1:68368738-68368757 MS.gene002678:intron 35.0%
!! CAGCAATAATGAGTTTTGGT+CGG - chr2.1:68369615-68369634 None:intergenic 35.0%
!! TTAGCTTGGCTTTTCCAAAT+TGG + chr2.1:68369284-68369303 MS.gene002678:intron 35.0%
!! TTCAAGTTTTTCACCTCCAT+GGG + chr2.1:68371048-68371067 MS.gene002678:intron 35.0%
!! TTTTACATCTAAGGCAGTGA+TGG + chr2.1:68368904-68368923 MS.gene002678:CDS 35.0%
!!! ATTTTTTGAGGGAGAGAAGA+AGG - chr2.1:68367872-68367891 None:intergenic 35.0%
!!! TGGAGTCATTTTTCATTCAC+AGG + chr2.1:68370985-68371004 MS.gene002678:intron 35.0%
!!! TTTCAAGTTTTTCACCTCCA+TGG + chr2.1:68371047-68371066 MS.gene002678:intron 35.0%
AAAAATGCTAAGCGGGTGTT+TGG - chr2.1:68371172-68371191 None:intergenic 40.0%
AAAAGGGACATCACTATACC+TGG - chr2.1:68370423-68370442 None:intergenic 40.0%
AAGAGCAACAAGCTTACTGA+TGG - chr2.1:68370616-68370635 None:intergenic 40.0%
AAGTTTGGTCTCAGGAACAA+AGG + chr2.1:68371375-68371394 MS.gene002678:CDS 40.0%
ACAGCTAAAAGACGTGTATC+AGG + chr2.1:68369395-68369414 MS.gene002678:CDS 40.0%
ACCTGCACAATGATAGGTTT+GGG - chr2.1:68370493-68370512 None:intergenic 40.0%
AGTGGAGTTGCATCAATGAT+AGG + chr2.1:68367680-68367699 MS.gene002678:CDS 40.0%
ATATCTCAAGGCAAACCTTG+TGG - chr2.1:68369916-68369935 None:intergenic 40.0%
ATCTGCTTCTCTACATCGTA+TGG + chr2.1:68369726-68369745 MS.gene002678:intron 40.0%
ATGAAAAATGACTCCACACC+GGG - chr2.1:68370981-68371000 None:intergenic 40.0%
ATGTTTCCTAGGAATGCAAG+GGG + chr2.1:68371012-68371031 MS.gene002678:intron 40.0%
CATCTAGATGGTAACAAGTG+GGG + chr2.1:68369158-68369177 MS.gene002678:CDS 40.0%
CATGTTTCCTAGGAATGCAA+GGG + chr2.1:68371011-68371030 MS.gene002678:intron 40.0%
CCTCATAACCATACAATTGG+AGG + chr2.1:68370343-68370362 MS.gene002678:CDS 40.0%
CCTCCAATTGTATGGTTATG+AGG - chr2.1:68370346-68370365 None:intergenic 40.0%
CGAAATCCTATGCCAACAAA+GGG + chr2.1:68369121-68369140 MS.gene002678:CDS 40.0%
CGACCAAAACTCATTATTGC+TGG + chr2.1:68369613-68369632 MS.gene002678:CDS 40.0%
GGTCCTCATAACCATACAAT+TGG + chr2.1:68370340-68370359 MS.gene002678:CDS 40.0%
GTGGATTCATCAAGTCGATA+AGG - chr2.1:68369446-68369465 None:intergenic 40.0%
GTGTATGCTGCAAAATTAGC+CGG - chr2.1:68369212-68369231 None:intergenic 40.0%
GTTAGCTCCTGAATTTCCTT+TGG + chr2.1:68371420-68371439 MS.gene002678:CDS 40.0%
TATCTCAAGGCAAACCTTGT+GGG - chr2.1:68369915-68369934 None:intergenic 40.0%
TCACAGGAATCATGTTTCCT+AGG + chr2.1:68371001-68371020 MS.gene002678:intron 40.0%
TCATGTTTCCTAGGAATGCA+AGG + chr2.1:68371010-68371029 MS.gene002678:intron 40.0%
TCCAAATTTACCTGTAGACC+AGG - chr2.1:68370183-68370202 None:intergenic 40.0%
TCCTGGTCTACAGGTAAATT+TGG + chr2.1:68370179-68370198 MS.gene002678:intron 40.0%
TCGAAATCCTATGCCAACAA+AGG + chr2.1:68369120-68369139 MS.gene002678:CDS 40.0%
TCTCTCCCTCAAAAAATTGG+AGG + chr2.1:68367875-68367894 MS.gene002678:CDS 40.0%
TGAAGCTTAGTCGAAGAAAG+AGG - chr2.1:68367722-68367741 None:intergenic 40.0%
TGTATGCTGCAAAATTAGCC+GGG - chr2.1:68369211-68369230 None:intergenic 40.0%
TTCAAGAAAGATGCTGTGCA+TGG + chr2.1:68370120-68370139 MS.gene002678:CDS 40.0%
TTCATCAAGTCGATAAGGCA+TGG - chr2.1:68369441-68369460 None:intergenic 40.0%
TTGGCTGCATTTCATCTAGA+TGG + chr2.1:68369146-68369165 MS.gene002678:CDS 40.0%
TTGTCTCCCAAAGGAAATTC+AGG - chr2.1:68371430-68371449 None:intergenic 40.0%
! CACCTGTTTTCATTCCAAAG+TGG - chr2.1:68369552-68369571 None:intergenic 40.0%
! GACATCACTATACCTGGTTT+TGG - chr2.1:68370417-68370436 None:intergenic 40.0%
! GCACCAGCAATAATGAGTTT+TGG - chr2.1:68369619-68369638 None:intergenic 40.0%
! GGAATCTAAAATTCCCATGG+AGG - chr2.1:68371064-68371083 None:intergenic 40.0%
! GGATATAAACTGGTTTCTGG+CGG + chr2.1:68370556-68370575 MS.gene002678:CDS 40.0%
! GTGATGTCCCTTTTCATCAT+TGG + chr2.1:68370429-68370448 MS.gene002678:intron 40.0%
! TAGTGAAGAATTTTCCAGGG+GGG + chr2.1:68370319-68370338 MS.gene002678:intron 40.0%
! TGAATTTCCTTTGGGAGACA+AGG + chr2.1:68371429-68371448 MS.gene002678:CDS 40.0%
! TGTTCCTGAGACCAAACTTT+TGG - chr2.1:68371374-68371393 None:intergenic 40.0%
! TTTGAAACCTTGTCTCCCAA+AGG - chr2.1:68371439-68371458 None:intergenic 40.0%
!! ACCCACTTTGGAATGAAAAC+AGG + chr2.1:68369547-68369566 MS.gene002678:intron 40.0%
!! AGGCACTGAATTCTTGTTGA+GGG - chr2.1:68370895-68370914 None:intergenic 40.0%
!! CATGTCCTTTAGGGTATTGA+TGG + chr2.1:68370831-68370850 MS.gene002678:intron 40.0%
!! TATCGACTTGATGAATCCAC+AGG + chr2.1:68369446-68369465 MS.gene002678:CDS 40.0%
!! TGCGTTTCTGATGATGGATA+TGG + chr2.1:68369814-68369833 MS.gene002678:CDS 40.0%
AAGCACTTGCGAGACTGTTT+GGG - chr2.1:68368492-68368511 None:intergenic 45.0%
AATGTCTCGAGGATAAGCAC+TGG - chr2.1:68369641-68369660 None:intergenic 45.0%
ACTGTAGAGCTCTTGCTAAC+CGG + chr2.1:68370521-68370540 MS.gene002678:CDS 45.0%
AGCTTAGTCGAAGAAAGAGG+TGG - chr2.1:68367719-68367738 None:intergenic 45.0%
AGGGTTTGGATTTGCCTCAT+GGG + chr2.1:68369348-68369367 MS.gene002678:intron 45.0%
AGTAGGTGCGTTTCTGATGA+TGG + chr2.1:68369808-68369827 MS.gene002678:CDS 45.0%
ATGCCTCACAAACAGGTACT+CGG + chr2.1:68368940-68368959 MS.gene002678:CDS 45.0%
ATGGATATGGCTCACGTAAG+TGG + chr2.1:68369827-68369846 MS.gene002678:CDS 45.0%
CAAACCTATCATTGTGCAGG+TGG + chr2.1:68370492-68370511 MS.gene002678:intron 45.0%
CACCTGCACAATGATAGGTT+TGG - chr2.1:68370494-68370513 None:intergenic 45.0%
CATGGGGGTCATTTATCTCA+TGG + chr2.1:68369365-68369384 MS.gene002678:CDS 45.0%
CTCAACAAGAATTCAGTGCC+TGG + chr2.1:68370894-68370913 MS.gene002678:CDS 45.0%
CTGCTAGTCCTCCAATTGTA+TGG - chr2.1:68370354-68370373 None:intergenic 45.0%
GAAGCCAAAAGTTTGGTCTC+AGG + chr2.1:68371367-68371386 MS.gene002678:CDS 45.0%
GACTGTTTGGGAGAACATAC+AGG - chr2.1:68368480-68368499 None:intergenic 45.0%
GAGCACCATCAATACCCTAA+AGG - chr2.1:68370839-68370858 None:intergenic 45.0%
GCAATGACAACAAGAGGACT+TGG + chr2.1:68371286-68371305 MS.gene002678:CDS 45.0%
GCTACTCAGTATCCTATTCC+CGG + chr2.1:68371484-68371503 MS.gene002678:CDS 45.0%
GTATGCTGCAAAATTAGCCG+GGG - chr2.1:68369210-68369229 None:intergenic 45.0%
TCACCAGCAATGACAACAAG+AGG + chr2.1:68371280-68371299 MS.gene002678:CDS 45.0%
TCCCAAACCTATCATTGTGC+AGG + chr2.1:68370489-68370508 MS.gene002678:intron 45.0%
TGAGATAAATGACCCCCATG+AGG - chr2.1:68369365-68369384 None:intergenic 45.0%
TGGATATGGCTCACGTAAGT+GGG + chr2.1:68369828-68369847 MS.gene002678:CDS 45.0%
TGTTTCCTAGGAATGCAAGG+GGG + chr2.1:68371013-68371032 MS.gene002678:intron 45.0%
TTAGACACTGTAACGAAGGG+TGG - chr2.1:68367957-68367976 None:intergenic 45.0%
TTGGTTCATGCCTCACAAAC+AGG + chr2.1:68368933-68368952 MS.gene002678:CDS 45.0%
! ACCTGGTTCTTGTTGATCTG+AGG + chr2.1:68370590-68370609 MS.gene002678:CDS 45.0%
! AGTCCTCTTGTTGTCATTGC+TGG - chr2.1:68371286-68371305 None:intergenic 45.0%
! GGATCTAGCTTCTTGGACTA+TGG + chr2.1:68368791-68368810 MS.gene002678:CDS 45.0%
! TCAACCATTATCTGGTTCCC+CGG + chr2.1:68369190-68369209 MS.gene002678:CDS 45.0%
!! AGGTGATGGATCTAGCTTCT+TGG + chr2.1:68368784-68368803 MS.gene002678:intron 45.0%
!! CAGGCACTGAATTCTTGTTG+AGG - chr2.1:68370896-68370915 None:intergenic 45.0%
!!! TGCTGTTTTTCCTGGTCTAC+AGG + chr2.1:68370170-68370189 MS.gene002678:CDS 45.0%
AAACACCCCCTTGCATTCCT+AGG - chr2.1:68371021-68371040 None:intergenic 50.0%
AGGGAGAGAAGAAGGAGAAG+AGG - chr2.1:68367864-68367883 None:intergenic 50.0%
ATGCAGCCAATGCCCTTTGT+TGG - chr2.1:68369136-68369155 None:intergenic 50.0%
CAGGGTTTGGATTTGCCTCA+TGG + chr2.1:68369347-68369366 MS.gene002678:intron 50.0%
CATGAGGCAAATCCAAACCC+TGG - chr2.1:68369349-68369368 None:intergenic 50.0%
CCAATGCCCTTTGTTGGCAT+AGG - chr2.1:68369130-68369149 None:intergenic 50.0%
CGGGCATAATCAATGTCTCG+AGG - chr2.1:68369652-68369671 None:intergenic 50.0%
CTCACAAACAGGTACTCGGA+AGG + chr2.1:68368944-68368963 MS.gene002678:CDS 50.0%
CTTCCGAGTACCTGTTTGTG+AGG - chr2.1:68368946-68368965 None:intergenic 50.0%
GACTTCCTCCAGTCTTTGAG+AGG + chr2.1:68370075-68370094 MS.gene002678:intron 50.0%
GCAACCACCTGCACAATGAT+AGG - chr2.1:68370499-68370518 None:intergenic 50.0%
GCCTCAGATCAACAAGAACC+AGG - chr2.1:68370594-68370613 None:intergenic 50.0%
GGGTTTGGATTTGCCTCATG+GGG + chr2.1:68369349-68369368 MS.gene002678:intron 50.0%
GGTTTGGATTTGCCTCATGG+GGG + chr2.1:68369350-68369369 MS.gene002678:CDS 50.0%
TAGAATTGAGGGCCTAAGCC+CGG + chr2.1:68370960-68370979 MS.gene002678:intron 50.0%
TAGGACCTCTCAAAGACTGG+AGG - chr2.1:68370083-68370102 None:intergenic 50.0%
TCATTGCTGGTGAACCGATG+CGG - chr2.1:68371273-68371292 None:intergenic 50.0%
TGGCGGTAGTGATAATCACC+TGG + chr2.1:68370573-68370592 MS.gene002678:CDS 50.0%
TTAGCCGGGGAACCAGATAA+TGG - chr2.1:68369197-68369216 None:intergenic 50.0%
! AAGGCAAACCTTGTGGGTTG+TGG - chr2.1:68369909-68369928 None:intergenic 50.0%
! AAGGCAGTGATGGAAGCAGT+TGG + chr2.1:68368914-68368933 MS.gene002678:CDS 50.0%
! CAGTCTTTGAGAGGTCCTAG+AGG + chr2.1:68370084-68370103 MS.gene002678:intron 50.0%
! CCTATGCCAACAAAGGGCAT+TGG + chr2.1:68369127-68369146 MS.gene002678:CDS 50.0%
! CTAAGCGGGTGTTTGGTAGT+GGG - chr2.1:68371165-68371184 None:intergenic 50.0%
! GAAGCACTTGCGAGACTGTT+TGG - chr2.1:68368493-68368512 None:intergenic 50.0%
! GCTAACCGGTTAGTTGAGCA+TGG + chr2.1:68370535-68370554 MS.gene002678:CDS 50.0%
! TCTTTGAGAGGTCCTAGAGG+TGG + chr2.1:68370087-68370106 MS.gene002678:CDS 50.0%
! TGCTGTGCATGGAGTTGATC+TGG + chr2.1:68370131-68370150 MS.gene002678:CDS 50.0%
!! AAAAGGTGACAAGAGTGCCC+TGG + chr2.1:68371234-68371253 MS.gene002678:intron 50.0%
!! CTCTAGGACCTCTCAAAGAC+TGG - chr2.1:68370086-68370105 None:intergenic 50.0%
!! TAGGAATGCAAGGGGGTGTT+TGG + chr2.1:68371020-68371039 MS.gene002678:intron 50.0%
AATGACTCCACACCGGGCTT+AGG - chr2.1:68370975-68370994 None:intergenic 55.0%
AGGTACTCGGAAGGTTTGCC+GGG + chr2.1:68368953-68368972 MS.gene002678:CDS 55.0%
CACACACCAAGTCACTCACC+AGG - chr2.1:68370915-68370934 None:intergenic 55.0%
CAGGTACTCGGAAGGTTTGC+CGG + chr2.1:68368952-68368971 MS.gene002678:CDS 55.0%
CGGAAGGTTTGCCGGGTAAA+AGG + chr2.1:68368960-68368979 MS.gene002678:CDS 55.0%
GCTAAGCGGGTGTTTGGTAG+TGG - chr2.1:68371166-68371185 None:intergenic 55.0%
TATGGTTATGAGGACCCCCC+TGG - chr2.1:68370336-68370355 None:intergenic 55.0%
TCAGTGCCTGGTGAGTGACT+TGG + chr2.1:68370906-68370925 MS.gene002678:intron 55.0%
TGTGACCACCACAACCCACA+AGG + chr2.1:68369898-68369917 MS.gene002678:CDS 55.0%
! GCAAACCTTGTGGGTTGTGG+TGG - chr2.1:68369906-68369925 None:intergenic 55.0%
!! CTGGTGAGTGACTTGGTGTG+TGG + chr2.1:68370913-68370932 MS.gene002678:intron 55.0%
!! GGGTATTGATGGTGCTCGTG+TGG + chr2.1:68370842-68370861 MS.gene002678:intron 55.0%
TGAACCGATGCGGATGCCTC+CGG - chr2.1:68371263-68371282 None:intergenic 60.0%
!! GACAAGAGTGCCCTGGTTCC+CGG + chr2.1:68371241-68371260 MS.gene002678:CDS 60.0%
GAACCGATGCGGATGCCTCC+GGG - chr2.1:68371262-68371281 None:intergenic 65.0%
GCAACTCCACTACACGCCGC+AGG - chr2.1:68367671-68367690 None:intergenic 65.0%
TTGAGGGCCTAAGCCCGGTG+TGG + chr2.1:68370965-68370984 MS.gene002678:intron 65.0%
!! AAGAGTGCCCTGGTTCCCGG+AGG + chr2.1:68371244-68371263 MS.gene002678:CDS 65.0%
!! GTTCCCGGAGGCATCCGCAT+CGG + chr2.1:68371256-68371275 MS.gene002678:CDS 65.0%
GCGGATGCCTCCGGGAACCA+GGG - chr2.1:68371254-68371273 None:intergenic 70.0%
TGCGGATGCCTCCGGGAACC+AGG - chr2.1:68371255-68371274 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 68367665 68371513 68367665 ID=MS.gene002678
chr2.1 mRNA 68367665 68371513 68367665 ID=MS.gene002678.t1;Parent=MS.gene002678
chr2.1 exon 68367665 68367896 68367665 ID=MS.gene002678.t1.exon1;Parent=MS.gene002678.t1
chr2.1 CDS 68367665 68367896 68367665 ID=cds.MS.gene002678.t1;Parent=MS.gene002678.t1
chr2.1 exon 68368786 68368981 68368786 ID=MS.gene002678.t1.exon2;Parent=MS.gene002678.t1
chr2.1 CDS 68368786 68368981 68368786 ID=cds.MS.gene002678.t1;Parent=MS.gene002678.t1
chr2.1 exon 68369088 68369262 68369088 ID=MS.gene002678.t1.exon3;Parent=MS.gene002678.t1
chr2.1 CDS 68369088 68369262 68369088 ID=cds.MS.gene002678.t1;Parent=MS.gene002678.t1
chr2.1 exon 68369350 68369467 68369350 ID=MS.gene002678.t1.exon4;Parent=MS.gene002678.t1
chr2.1 CDS 68369350 68369467 68369350 ID=cds.MS.gene002678.t1;Parent=MS.gene002678.t1
chr2.1 exon 68369569 68369681 68369569 ID=MS.gene002678.t1.exon5;Parent=MS.gene002678.t1
chr2.1 CDS 68369569 68369681 68369569 ID=cds.MS.gene002678.t1;Parent=MS.gene002678.t1
chr2.1 exon 68369797 68369919 68369797 ID=MS.gene002678.t1.exon6;Parent=MS.gene002678.t1
chr2.1 CDS 68369797 68369919 68369797 ID=cds.MS.gene002678.t1;Parent=MS.gene002678.t1
chr2.1 exon 68370087 68370191 68370087 ID=MS.gene002678.t1.exon7;Parent=MS.gene002678.t1
chr2.1 CDS 68370087 68370191 68370087 ID=cds.MS.gene002678.t1;Parent=MS.gene002678.t1
chr2.1 exon 68370337 68370423 68370337 ID=MS.gene002678.t1.exon8;Parent=MS.gene002678.t1
chr2.1 CDS 68370337 68370423 68370337 ID=cds.MS.gene002678.t1;Parent=MS.gene002678.t1
chr2.1 exon 68370511 68370618 68370511 ID=MS.gene002678.t1.exon9;Parent=MS.gene002678.t1
chr2.1 CDS 68370511 68370618 68370511 ID=cds.MS.gene002678.t1;Parent=MS.gene002678.t1
chr2.1 exon 68370843 68370915 68370843 ID=MS.gene002678.t1.exon10;Parent=MS.gene002678.t1
chr2.1 CDS 68370843 68370915 68370843 ID=cds.MS.gene002678.t1;Parent=MS.gene002678.t1
chr2.1 exon 68371239 68371513 68371239 ID=MS.gene002678.t1.exon11;Parent=MS.gene002678.t1
chr2.1 CDS 68371239 68371513 68371239 ID=cds.MS.gene002678.t1;Parent=MS.gene002678.t1
Gene Sequence

>MS.gene002678

ATGCCTGCGGCGTGTAGTGGAGTTGCATCAATGATAGGTTCTTTACAACAACCACCTCTTTCTTCGACTAAGCTTCATAATTTCTCTCATGGAGGCCTTTTACCTCAACTTCATTTCAACCATAACAGTAATCATTTCAAGCCCTGCAAAGTATCTCTTCATGAAGCAACTTTTGGGAAATCTTCATCATCATCTTCCTCTTCTCCTTCTTCTCTCCCTCAAAAAATTGGAGGTAAATTCTCTCTCTTTTTTCCATTTCATTTTTTGATTCTATTTGCTTTAATATTATCCACCCTTCGTTACAGTGTCTAACAATTAGGATAGATAGTATATATAAATTGTCTGAGTTTAATTGAATATTACTGCAACATGCAATCTATTTTATTTTTTTACTAATTTATCTAGCTCGGTTCCATCTATATTTATTATACATGTTTTGTTATGTATCAGTCTTTTATTTTGGTTTAATTTTATTTTCATTAGTAATTTTTTGCCCTGTTTTCATAAACAACTTAATTAAGTGCTTATAGCATAAACATATATATAAGTGCTTGTGTAAAAGCTATATCTTTAACAAAAGATAAAATGAAGTCTTTTTTTTTTTTTTGCCTTCCGATAAGTTATAAGTTGTTTTTATTTATAAGCTGGTAAACAAACACAAGACAACTTCTGCTTTTTTGAAAAAATCTCTATGTTTGTGAGTATCAAAGTCACTTTTTTTTATAATTGGTAACAAACATACCCTATACCGAAGAATTTATCGAAATTAGTTGAAATCAGCTTATGGACTAGTAAATTTGTCATAAGCTGGTCCTGTATGTTCTCCCAAACAGTCTCGCAAGTGCTTCTGTCAACAAATAAGCTCAAATAAGTCGATCAAAACTGGCCCCAAGTATGACAATGTGAAAAACAATATATTTTACTCAAAGCACTTCTGGGATATTTGTTTCTGTATTTTTTTTATCTCCTTTGGTGTCAAGTGTCATTATAAAGTTCATGTTTTTTATGCCATCCTGTCAATATATATCTGAATTCTGTATTTTGTATACCGAAATTTAAATATATATGCATGCTTGGTGATCTTTCTTGTTCATGGAATTATGTGCTATTTCAAATATCAGGTGATGGATCTAGCTTCTTGGACTATGGCTTGAGTGAAGCTGATCCTGATGTTCATGCCATAATTAACAAGGAAAAGGACCGTCAATTCAGAAGTCTTGAACTTATTGCTTCTGAGAATTTTACATCTAAGGCAGTGATGGAAGCAGTTGGTTCATGCCTCACAAACAGGTACTCGGAAGGTTTGCCGGGTAAAAGGTAAATTCTTATCTATTTTTACTTCTCTAGAAATAGGAGTTTTACTTGAAGTTTCCTTTTTTCCCTCTTCTGCAAATTTGTTGATTGGATCCCATTTACATGTAAGGTATTATGGTGGCAATGAGCACATTGATGAGCTCGAAATCCTATGCCAACAAAGGGCATTGGCTGCATTTCATCTAGATGGTAACAAGTGGGGTGTAAATGTTCAACCATTATCTGGTTCCCCGGCTAATTTTGCAGCATACACTGCAATTCTTAAACCACATGATCGTATAATGGTAAACTATTTTTCTCACACGTTAGCTTGGCTTTTCCAAATTGGAAGTCGATTTTGATAGCGTTCATGTGTAATGATATGTTACCAGGGTTTGGATTTGCCTCATGGGGGTCATTTATCTCATGGATTCATGACAGCTAAAAGACGTGTATCAGGCACATCAATTTATTTTGAATCCATGCCTTATCGACTTGATGAATCCACAGGTGCTTATATTTTGTCATTAAAATCGTTTCAGATATATTGGCTTATTTGTGGAATAACTTGGGATTATTTTTTTCTTTCACCCACTTTGGAATGAAAACAGGTGTTATTGATTATGATATGTTGGAGAAAACTGCTGCTCTATTCCGACCAAAACTCATTATTGCTGGTGCCAGTGCTTATCCTCGAGACATTGATTATGCCCGCTTTAGAAAAGTATGTTCTGTACTTGAGTATTTTCTGATATTATAATCATCATTATCTGCTTCTCTACATCGTATGGTTTTTTCCTTCACAAATAGCTAATTACATCTTTATATGCAAATGAAAGATTGCAGATTCAGTAGGTGCGTTTCTGATGATGGATATGGCTCACGTAAGTGGGCTTATTGCTGCTTCTGTTCTTGCTGATCCCTTTGAGTTTGTTGATATTGTGACCACCACAACCCACAAGGTTTGCCTTGAGATATTTGTGTTTTCTTTGTATTTTTCCACTCAAAATTGAAAAGAAAGAGTTTGCTTTTTTTTTTTTTTTGGTTTAAAAACATAATTCTATTTACTTGAAGTTATGAAGTCGGTACTTTTCTTTGTAATACTCACAACACTCATGACTTCCTCCAGTCTTTGAGAGGTCCTAGAGGTGGTATGATATTCTTCAAGAAAGATGCTGTGCATGGAGTTGATCTGGAGTCTGCCATTAACAATGCTGTTTTTCCTGGTCTACAGGTAAATTTGGAATATCCTCTAATTAGTTCTTTTTTAACTATTCTGGTCGAGAAAGTGCATGAATCCTATGTACCTATTGAGTCAGATGCATTTATCTTCTTTACCTTCCTAGTTTGTGATTTTAATATAGTGAAGAATTTTCCAGGGGGGTCCTCATAACCATACAATTGGAGGACTAGCAGTTTGCTTGAAGTATGCTCAGTCTCTAGATTTTAAAAATTACCAAAACCAGGTATAGTGATGTCCCTTTTCATCATTGGTTAGAGTTTGACATAAAGCACTTTGTAACAATAACACTCCCAAACCTATCATTGTGCAGGTGGTTGCTAACTGTAGAGCTCTTGCTAACCGGTTAGTTGAGCATGGATATAAACTGGTTTCTGGCGGTAGTGATAATCACCTGGTTCTTGTTGATCTGAGGCCATCAGTAAGCTTGTTGCTCTTTTCTTTGTCAATATAATGATAATTCTGTCTTGGCTTCCCGTGCCCAATTTTTTTTAGAAATAAGGAGTATGAAATTTTCTGAAAAATTTGTAGTGCTATGTAAATTGCTGGCGTGTTTTTTAGTGTGAAAATAGGTTTGATTTTGCTTATTGATGTATATTCCTTTTAGTACCTCACTGACTATATTTCACATATCATGTCCTTTAGGGTATTGATGGTGCTCGTGTGGAAAAAATTCTTGACATGGCTTCTATAACCCTCAACAAGAATTCAGTGCCTGGTGAGTGACTTGGTGTGTGGAGTCATTTTCCTTTTTCTTTTTGATAGAATTGAGGGCCTAAGCCCGGTGTGGAGTCATTTTTCATTCACAGGAATCATGTTTCCTAGGAATGCAAGGGGGTGTTTGGCAAGTTTCAAGTTTTTCACCTCCATGGGAATTTTAGATTCCCATTCAATTTCTTTTTTTTATAACATTCATACGAATCATGACAGTTCAAGACTTCCAATTTTAGAGAGTTAAAAATATCCCACTACCAAACACCCGCTTAGCATTTTTGCTTATTTGTTGTGATTATTACTGACATGTGCTAATTATTACAAAAGGTGACAAGAGTGCCCTGGTTCCCGGAGGCATCCGCATCGGTTCACCAGCAATGACAACAAGAGGACTTGGTGAGAGAGAATTTGAACTAATTGCAGACATAATTCATGAGGGTGTGCAGATAAGTCTTGAAGCCAAAAGTTTGGTCTCAGGAACAAAGGTTCAAGATTTTCTAAACTTTGTGTTAGCTCCTGAATTTCCTTTGGGAGACAAGGTTTCAAATTTACGGAGGAAAGTTGAAGCTCTTGCTACTCAGTATCCTATTCCCGGAGTCTAA
Protein sequence

>MS.gene002678.t1

MPAACSGVASMIGSLQQPPLSSTKLHNFSHGGLLPQLHFNHNSNHFKPCKVSLHEATFGKSSSSSSSSPSSLPQKIGGDGSSFLDYGLSEADPDVHAIINKEKDRQFRSLELIASENFTSKAVMEAVGSCLTNRYSEGLPGKRYYGGNEHIDELEILCQQRALAAFHLDGNKWGVNVQPLSGSPANFAAYTAILKPHDRIMGLDLPHGGHLSHGFMTAKRRVSGTSIYFESMPYRLDESTGVIDYDMLEKTAALFRPKLIIAGASAYPRDIDYARFRKIADSVGAFLMMDMAHVSGLIAASVLADPFEFVDIVTTTTHKSLRGPRGGMIFFKKDAVHGVDLESAINNAVFPGLQGGPHNHTIGGLAVCLKYAQSLDFKNYQNQVVANCRALANRLVEHGYKLVSGGSDNHLVLVDLRPSGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGLGEREFELIADIIHEGVQISLEAKSLVSGTKVQDFLNFVLAPEFPLGDKVSNLRRKVEALATQYPIPGV