AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene00638

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene00638.t1 MTR_2g006570 98.651 593 8 0 1 593 1 593 0.0 1222
MS.gene00638.t1 MTR_2g006570 98.815 422 5 0 172 593 1 422 0.0 880
MS.gene00638.t1 MTR_3g073470 66.275 596 168 8 7 592 4 576 0.0 800
MS.gene00638.t1 MTR_8g081510 64.009 464 162 1 128 591 4 462 0.0 643
MS.gene00638.t1 MTR_3g084310 64.009 464 162 1 128 591 4 462 0.0 638
MS.gene00638.t1 MTR_3g084310 67.486 366 114 1 128 493 4 364 0.0 531
MS.gene00638.t1 MTR_5g030950 53.928 471 202 6 130 592 47 510 1.79e-170 494
MS.gene00638.t1 MTR_5g067060 53.004 466 207 5 133 593 42 500 8.47e-170 492
MS.gene00638.t1 MTR_2g018290 52.034 467 203 5 130 590 81 532 4.79e-166 484
MS.gene00638.t1 MTR_7g108420 43.820 445 200 10 161 591 1 409 2.63e-107 329
MS.gene00638.t1 MTR_3g062030 49.367 79 36 1 403 481 13 87 2.17e-15 76.3
MS.gene00638.t1 MTR_1g073580 39.583 96 58 0 446 541 83 178 2.83e-15 76.3
MS.gene00638.t1 MTR_1g073580 38.158 76 45 1 293 368 10 83 1.91e-12 67.8
MS.gene00638.t1 MTR_7g070020 47.887 71 30 1 465 528 1 71 7.50e-15 71.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene00638.t1 AT1G22020 69.551 601 162 4 7 593 6 599 0.0 864
MS.gene00638.t1 AT1G22020 69.551 601 162 4 7 593 6 599 0.0 864
MS.gene00638.t1 AT1G36370 70.420 595 168 4 1 590 1 592 0.0 846
MS.gene00638.t1 AT4G13930 64.009 464 162 1 128 591 4 462 0.0 632
MS.gene00638.t1 AT4G13890 62.876 466 168 1 128 593 4 464 0.0 621
MS.gene00638.t1 AT4G13890 65.903 393 129 1 128 520 4 391 0.0 552
MS.gene00638.t1 AT4G37930 54.352 471 200 6 130 592 46 509 2.48e-176 509
MS.gene00638.t1 AT4G32520 50.837 478 211 5 119 590 69 528 1.26e-168 490
MS.gene00638.t1 AT4G32520 50.837 478 211 5 119 590 69 528 1.26e-168 490
MS.gene00638.t1 AT5G26780 52.866 471 207 6 130 592 46 509 2.63e-168 489
MS.gene00638.t1 AT5G26780 52.866 471 207 6 130 592 46 509 2.63e-168 489
MS.gene00638.t1 AT5G26780 51.129 487 207 7 130 592 46 525 3.78e-164 479
MS.gene00638.t1 AT5G26780 51.129 487 207 7 130 592 46 525 3.78e-164 479

Find 164 sgRNAs with CRISPR-Local

Find 257 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTATTACTTTGGGATTTA+AGG 0.118090 2.1:-75603456 MS.gene00638:CDS
GTTGAAGAATTTCGTATTCT+AGG 0.184768 2.1:-75605479 MS.gene00638:CDS
CAGAGTATTTATTCGTTAAA+TGG 0.201982 2.1:+75605186 None:intergenic
CCGAATGGGAAGAAAGTTTC+TGG 0.213302 2.1:-75604921 MS.gene00638:CDS
TGCAACACAGTTTGCTTTGC+CGG 0.255179 2.1:-75602781 MS.gene00638:CDS
CGAAGGTACTTGAGAGCAAT+AGG 0.295279 2.1:-75602839 MS.gene00638:CDS
AGAAAATGCCGCTTGGTAAC+TGG 0.309679 2.1:-75603493 MS.gene00638:CDS
CCTTTGCTGCGAGCGTGCTT+TGG 0.316009 2.1:-75605105 MS.gene00638:CDS
TTAAATCCCAAAGTAATAAA+TGG 0.319511 2.1:+75603458 None:intergenic
TGAGAAATTGAGAGATAGAT+TGG 0.320061 2.1:+75605694 None:intergenic
AGTGGCCACTCCTGAGTATA+AGG 0.321450 2.1:-75603572 MS.gene00638:CDS
TCTATCATCTTCATCGTTGT+TGG 0.322696 2.1:+75605505 None:intergenic
CAGACAACCATTTATTACTT+TGG 0.331502 2.1:-75603465 MS.gene00638:CDS
TAATCTTGATCCTAAGTGTT+GGG 0.334502 2.1:-75605075 MS.gene00638:CDS
AGACAACCATTTATTACTTT+GGG 0.342729 2.1:-75603464 MS.gene00638:CDS
ACTTTGGGATTTAAGGCCCC+TGG 0.351644 2.1:-75603449 MS.gene00638:CDS
CAATAGCAAGGGCGGCAATA+TGG 0.355108 2.1:+75603605 None:intergenic
CCACCACAAATAAGTATCTT+AGG 0.356752 2.1:+75604801 None:intergenic
CATGACTTCAAGAGGGTGTT+TGG 0.369981 2.1:-75602958 MS.gene00638:CDS
TGAAGGGGAACGGTGGGGAC+AGG 0.380209 2.1:+75605581 None:intergenic
GACAATGGAATTATAATTCC+TGG 0.388060 2.1:-75603105 MS.gene00638:CDS
GGTTGTGATTGTAGAGGATT+CGG 0.392422 2.1:+75605424 None:intergenic
CCAGAAACTTTCTTCCCATT+CGG 0.397392 2.1:+75604921 None:intergenic
TTAGCCGAAGTACAGGAATA+TGG 0.398254 2.1:+75605038 None:intergenic
ATCAGCCATCGTCTCAAAAT+CGG 0.409423 2.1:+75602932 None:intergenic
ATGCCTGGTGCACGTTACTA+TGG 0.415234 2.1:-75605158 MS.gene00638:CDS
ATGGGGTTGGATACTCCTTC+CGG 0.419166 2.1:-75604972 MS.gene00638:CDS
AGCAGGATCCGCTACCTGTA+AGG 0.422442 2.1:+75605313 None:intergenic
TGAGAGATAGATTGGATTGA+TGG 0.427231 2.1:+75605702 None:intergenic
TTATAAGATTAATCCTCAAT+CGG 0.429225 2.1:-75604871 MS.gene00638:CDS
CTTTGGGATTTAAGGCCCCT+GGG 0.430295 2.1:-75603448 MS.gene00638:CDS
GCGATGGAGTCGTCGGGAAT+CGG 0.431171 2.1:+75605641 None:intergenic
ACAACATCACAATAATCAAA+AGG 0.431468 2.1:+75603811 None:intergenic
TGAGGTCCGCCTTGCAATGA+TGG 0.431877 2.1:+75603634 None:intergenic
CACCGTTCCCCTTCAGCTCA+TGG 0.437513 2.1:-75605573 MS.gene00638:CDS
CGAATGGGAAGAAAGTTTCT+GGG 0.444376 2.1:-75604920 MS.gene00638:CDS
GGATTCTACGGAAGCTCTCT+TGG 0.445479 2.1:+75605403 None:intergenic
GTTTGATGGATCGCGGAAGC+TGG 0.451254 2.1:+75605604 None:intergenic
CGTCCTAAGATACTTATTTG+TGG 0.451580 2.1:-75604804 MS.gene00638:CDS
AGAAGTATCCCTCTCTTCCT+TGG 0.451637 2.1:+75603718 None:intergenic
TTAAGGCCCCTGGGGTTGAC+AGG 0.455853 2.1:-75603439 MS.gene00638:intron
GTGGGGTGATCAACCCTTAC+AGG 0.456045 2.1:-75605327 MS.gene00638:CDS
TCTATAATCTCGTATATAGC+AGG 0.459587 2.1:+75605296 None:intergenic
CATTCTTGAGCTCCGGGTAC+GGG 0.461291 2.1:-75602814 MS.gene00638:CDS
ACATTCTTGAGCTCCGGGTA+CGG 0.461313 2.1:-75602815 MS.gene00638:CDS
TATAAGATTAATCCTCAATC+GGG 0.462240 2.1:-75604870 MS.gene00638:CDS
ATTATGATAAGCTTGAAGAA+AGG 0.464865 2.1:-75604839 MS.gene00638:CDS
GAAAATGCCGCTTGGTAACT+GGG 0.468450 2.1:-75603492 MS.gene00638:CDS
ATAGGGACATTCTTGAGCTC+CGG 0.469357 2.1:-75602821 MS.gene00638:CDS
CAAAGCACGCTCGCAGCAAA+GGG 0.476606 2.1:+75605106 None:intergenic
TATACTGGATTGCTGTCGCC+GGG 0.478319 2.1:-75605005 MS.gene00638:CDS
GGAGTTCTTATCCTCGAGAA+TGG 0.479061 2.1:-75604779 MS.gene00638:CDS
TTATGATAAGCTTGAAGAAA+GGG 0.479642 2.1:-75604838 MS.gene00638:CDS
GTATACTGGATTGCTGTCGC+CGG 0.479657 2.1:-75605006 MS.gene00638:CDS
AGCAAAATTAGCCGAAGTAC+AGG 0.484132 2.1:+75605031 None:intergenic
GCAACACAGTTTGCTTTGCC+GGG 0.486245 2.1:-75602780 MS.gene00638:CDS
GTGGAGGGCGATGGAGTCGT+CGG 0.486855 2.1:+75605634 None:intergenic
TGGAGGGCGATGGAGTCGTC+GGG 0.490866 2.1:+75605635 None:intergenic
AACATGCTGCAGAGGGAGCA+TGG 0.493304 2.1:-75602882 MS.gene00638:CDS
CACCCTCTTGAAGTCATGGC+GGG 0.494924 2.1:+75602963 None:intergenic
TGCTATTGCATTAAAACAAG+TGG 0.496306 2.1:-75603590 MS.gene00638:CDS
CCAAAGCACGCTCGCAGCAA+AGG 0.498013 2.1:+75605105 None:intergenic
AAATACTCTGAAGGAATGCC+TGG 0.501098 2.1:-75605173 MS.gene00638:CDS
TTACCTATCCTTACTCCTCC+AGG 0.504409 2.1:+75603087 None:intergenic
TTAATCTTGATCCTAAGTGT+TGG 0.507914 2.1:-75605076 MS.gene00638:CDS
CATGGATATTATACTCCGAA+TGG 0.509491 2.1:-75604936 MS.gene00638:CDS
GAAGGTACTTGAGAGCAATA+GGG 0.510496 2.1:-75602838 MS.gene00638:CDS
ACGGTGGGGACAGGGTTTGA+TGG 0.511010 2.1:+75605590 None:intergenic
GGAAGCTGGATTCGAGGTGG+AGG 0.511850 2.1:+75605618 None:intergenic
AATCTTGATCCTAAGTGTTG+GGG 0.512037 2.1:-75605074 MS.gene00638:CDS
GAGTTCTTATCCTCGAGAAT+GGG 0.512092 2.1:-75604778 MS.gene00638:CDS
GGATTCGAGGTGGAGGGCGA+TGG 0.513782 2.1:+75605625 None:intergenic
CCACAAACAGAGAAAGAAAA+CGG 0.514774 2.1:-75605548 MS.gene00638:CDS
ACAACTCACAAGAGTCTTCG+AGG 0.517309 2.1:-75603781 MS.gene00638:CDS
ATATAATACCTGTCAACCCC+AGG 0.518740 2.1:+75603431 None:intergenic
CCTAAGATACTTATTTGTGG+TGG 0.520445 2.1:-75604801 MS.gene00638:CDS
TTATAATTCCTGGAGGAGTA+AGG 0.522728 2.1:-75603095 MS.gene00638:CDS
TAGGGACATTCTTGAGCTCC+GGG 0.524029 2.1:-75602820 MS.gene00638:CDS
ACAAGAGTCTTCGAGGTCCA+AGG 0.527206 2.1:-75603774 MS.gene00638:CDS
ATGAGCTGAAGGGGAACGGT+GGG 0.527250 2.1:+75605575 None:intergenic
AAAAGCCGCGGTTCGATCGT+GGG 0.528207 2.1:-75605345 MS.gene00638:CDS
CAAGAGTCTTCGAGGTCCAA+GGG 0.534687 2.1:-75603773 MS.gene00638:CDS
CAACATCACAATAATCAAAA+GGG 0.534805 2.1:+75603812 None:intergenic
GAAAAGCCGCGGTTCGATCG+TGG 0.537478 2.1:-75605346 MS.gene00638:CDS
ATGGATATTATACTCCGAAT+GGG 0.537996 2.1:-75604935 MS.gene00638:CDS
CTAAGATACTTATTTGTGGT+GGG 0.538564 2.1:-75604800 MS.gene00638:CDS
GAAGGGGAACGGTGGGGACA+GGG 0.539433 2.1:+75605582 None:intergenic
TGCATGTATGCCTTATACTC+AGG 0.539801 2.1:+75603562 None:intergenic
CCACCATAGTAACGTGCACC+AGG 0.539950 2.1:+75605155 None:intergenic
ATCACCTCGATCGGATTCTA+CGG 0.544145 2.1:+75605391 None:intergenic
TTTGTGGTTCCATGAGCTGA+AGG 0.545508 2.1:+75605564 None:intergenic
TGTGACATGGCTCAGATTAG+TGG 0.548967 2.1:-75604705 MS.gene00638:CDS
GACTTCAAGAGGGTGTTTGG+AGG 0.553311 2.1:-75602955 MS.gene00638:CDS
GATCGCGGAAGCTGGATTCG+AGG 0.556245 2.1:+75605612 None:intergenic
GCAGGATCCGCTACCTGTAA+GGG 0.557738 2.1:+75605314 None:intergenic
ACATGCTGCAGAGGGAGCAT+GGG 0.557940 2.1:-75602881 MS.gene00638:CDS
TAATCAATAAAACCCGATTG+AGG 0.563006 2.1:+75604858 None:intergenic
CAAACACCCTCTTGAAGTCA+TGG 0.563636 2.1:+75602959 None:intergenic
AACCCCATAATTCTATCCCC+CGG 0.565369 2.1:+75604987 None:intergenic
ACATTCACACCCCAACACTT+AGG 0.565506 2.1:+75605065 None:intergenic
GAGAGGGATACTTCTTACTC+AGG 0.566579 2.1:-75603710 MS.gene00638:CDS
TAGTGGGCTAATTGCAGCCA+AGG 0.567530 2.1:-75604688 MS.gene00638:intron
GAACAAAACCAAGGAAGAGA+GGG 0.569137 2.1:-75603726 MS.gene00638:CDS
AGCTGTGTTATTGTGTGACA+TGG 0.570438 2.1:-75604718 MS.gene00638:CDS
TTCCATGAGCTGAAGGGGAA+CGG 0.572001 2.1:+75605571 None:intergenic
CAAAAGCTTCAACCCGTACC+CGG 0.575415 2.1:+75602802 None:intergenic
TTAACGAATAAATACTCTGA+AGG 0.575868 2.1:-75605182 MS.gene00638:CDS
TCCGGAGGGAATACTAGTCA+TGG 0.579396 2.1:-75604954 MS.gene00638:CDS
TGATCAACCCTTACAGGTAG+CGG 0.579575 2.1:-75605321 MS.gene00638:CDS
CATGAGCTGAAGGGGAACGG+TGG 0.580804 2.1:+75605574 None:intergenic
TTTCGTGACTCGAGATCAAG+TGG 0.581695 2.1:+75605365 None:intergenic
TCTCTTGGTTGTGATTGTAG+AGG 0.582378 2.1:+75605418 None:intergenic
TCCATGACTAGTATTCCCTC+CGG 0.583312 2.1:+75604953 None:intergenic
TACTGGATTGCTGTCGCCGG+GGG 0.583385 2.1:-75605003 MS.gene00638:CDS
GTATAAGGCATACATGCAGC+AGG 0.583723 2.1:-75603557 MS.gene00638:CDS
GAGGTCCGCCTTGCAATGAT+GGG 0.585958 2.1:+75603635 None:intergenic
GGAACAAAACCAAGGAAGAG+AGG 0.587356 2.1:-75603727 MS.gene00638:CDS
AAAGCCGCGGTTCGATCGTG+GGG 0.587387 2.1:-75605344 MS.gene00638:CDS
ATGGAGTCGTCGGGAATCGG+TGG 0.587439 2.1:+75605644 None:intergenic
ACCCTCTTGAAGTCATGGCG+GGG 0.594967 2.1:+75602964 None:intergenic
TCGGGAATCGGTGGACGGCG+CGG 0.594984 2.1:+75605653 None:intergenic
AGACATGTTGCAGATAAATG+TGG 0.598660 2.1:-75604741 MS.gene00638:CDS
GTTGAGAAGAAAATGCCGCT+TGG 0.600657 2.1:-75603500 MS.gene00638:CDS
TGAGCTGAAGGGGAACGGTG+GGG 0.601633 2.1:+75605576 None:intergenic
AGTCGTCGGGAATCGGTGGA+CGG 0.602247 2.1:+75605648 None:intergenic
GGAATCGGTGGACGGCGCGG+AGG 0.602258 2.1:+75605656 None:intergenic
CCCTCTTGAAGTCATGGCGG+GGG 0.602417 2.1:+75602965 None:intergenic
TTTGGGATTTAAGGCCCCTG+GGG 0.603999 2.1:-75603447 MS.gene00638:CDS
GAAGCTGGATTCGAGGTGGA+GGG 0.604018 2.1:+75605619 None:intergenic
TGTGGTTCCATGAGCTGAAG+GGG 0.604077 2.1:+75605566 None:intergenic
AAATTGCAAACATGCTGCAG+AGG 0.606043 2.1:-75602890 MS.gene00638:CDS
ATTCCTGGAGGAGTAAGGAT+AGG 0.606404 2.1:-75603090 MS.gene00638:intron
TTGTGGTTCCATGAGCTGAA+GGG 0.608128 2.1:+75605565 None:intergenic
AATTGCAAACATGCTGCAGA+GGG 0.608187 2.1:-75602889 MS.gene00638:CDS
AAGTGGACGATCACCTCGAT+CGG 0.612859 2.1:+75605382 None:intergenic
GTGACATGGCTCAGATTAGT+GGG 0.613437 2.1:-75604704 MS.gene00638:CDS
ATTGCAGAAGACTATTTCGA+AGG 0.614744 2.1:-75602856 MS.gene00638:CDS
TATAATACCTGTCAACCCCA+GGG 0.618108 2.1:+75603432 None:intergenic
GCAGCCATATTCCTGTACTT+CGG 0.621993 2.1:-75605042 MS.gene00638:CDS
GCGGCAATATGGTTATTATG+AGG 0.625894 2.1:+75603616 None:intergenic
CGCGGAAGCTGGATTCGAGG+TGG 0.631260 2.1:+75605615 None:intergenic
AAAATGCCGCTTGGTAACTG+GGG 0.632870 2.1:-75603491 MS.gene00638:CDS
ATCGGAAGGGAACAAAACCA+AGG 0.639567 2.1:-75603735 MS.gene00638:CDS
CCTGGTGCACGTTACTATGG+TGG 0.642444 2.1:-75605155 MS.gene00638:CDS
AGAGGGATACTTCTTACTCA+GGG 0.644868 2.1:-75603709 MS.gene00638:CDS
AGTCTTCGAGGTCCAAGGGG+TGG 0.648124 2.1:-75603769 MS.gene00638:CDS
AGGGCTGTGATGGAAGCACT+TGG 0.648724 2.1:-75605212 MS.gene00638:CDS
GAATGGGAAGAAAGTTTCTG+GGG 0.652417 2.1:-75604919 MS.gene00638:CDS
ATACTGGATTGCTGTCGCCG+GGG 0.657042 2.1:-75605004 MS.gene00638:CDS
TGACTAGTATTCCCTCCGGA+AGG 0.658793 2.1:+75604957 None:intergenic
GGTTGGATACTCCTTCCGGA+GGG 0.661578 2.1:-75604968 MS.gene00638:CDS
GTATGCCTTATACTCAGGAG+TGG 0.664075 2.1:+75603567 None:intergenic
TTAGCATAATCCCATTCTCG+AGG 0.664741 2.1:+75604768 None:intergenic
GGGTTGGATACTCCTTCCGG+AGG 0.665412 2.1:-75604969 MS.gene00638:CDS
TATGTTCAAATGTCAAAACC+CGG 0.667596 2.1:+75602762 None:intergenic
ATCACCCCACGATCGAACCG+CGG 0.669715 2.1:+75605340 None:intergenic
AAATGCCGCTTGGTAACTGG+GGG 0.673920 2.1:-75603490 MS.gene00638:CDS
ACACCCTCTTGAAGTCATGG+CGG 0.681018 2.1:+75602962 None:intergenic
AAGAGTCTTCGAGGTCCAAG+GGG 0.697636 2.1:-75603772 MS.gene00638:CDS
GGACAGGGTTTGATGGATCG+CGG 0.699775 2.1:+75605597 None:intergenic
TCTCGAGTCACGAAAAGCCG+CGG 0.714087 2.1:-75605357 MS.gene00638:CDS
AATGGAATTATAATTCCTGG+AGG 0.715263 2.1:-75603102 MS.gene00638:CDS
ATAATACCTGTCAACCCCAG+GGG 0.725327 2.1:+75603433 None:intergenic
GCTTCCGTAGAATCCGATCG+AGG 0.738124 2.1:-75605395 MS.gene00638:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGTTAACGAAATTATAAAA+TGG + chr2.1:75604174-75604193 None:intergenic 15.0%
!! TAAAACATAAAAGATTAAAC+AGG + chr2.1:75604268-75604287 None:intergenic 15.0%
!!! ATCGAGAATTTTTTAAATTA+TGG - chr2.1:75604146-75604165 MS.gene00638:intron 15.0%
!!! ATCGATAAAATTCAATTTTA+GGG + chr2.1:75604059-75604078 None:intergenic 15.0%
!!! TCGAGAATTTTTTAAATTAT+GGG - chr2.1:75604147-75604166 MS.gene00638:intron 15.0%
!!! TTGAATAAAATTGCTATTTT+TGG - chr2.1:75605354-75605373 MS.gene00638:CDS 15.0%
!! TTAAATCCCAAAGTAATAAA+TGG + chr2.1:75605028-75605047 None:intergenic 20.0%
!! TTATAAGATTAATCCTCAAT+CGG - chr2.1:75603612-75603631 MS.gene00638:CDS 20.0%
!! TTATTAGATATTTGTGCAAA+GGG + chr2.1:75604567-75604586 None:intergenic 20.0%
!! TTTATTAGATATTTGTGCAA+AGG + chr2.1:75604568-75604587 None:intergenic 20.0%
!!! ATTTATTACTTTGGGATTTA+AGG - chr2.1:75605027-75605046 MS.gene00638:CDS 20.0%
!!! CAACAATACCTTATTTTTTT+TGG - chr2.1:75605283-75605302 MS.gene00638:CDS 20.0%
!!! GATCGATAAAATTCAATTTT+AGG + chr2.1:75604060-75604079 None:intergenic 20.0%
!!! TTAACTTTGAAAGTTTAGTA+GGG - chr2.1:75603873-75603892 MS.gene00638:intron 20.0%
! AATTTCAAGGACTAAATTGA+CGG + chr2.1:75604107-75604126 None:intergenic 25.0%
! ACAACATCACAATAATCAAA+AGG + chr2.1:75604675-75604694 None:intergenic 25.0%
! ACACTATTAACCACAATAAA+GGG + chr2.1:75604338-75604357 None:intergenic 25.0%
! AGACAACCATTTATTACTTT+GGG - chr2.1:75605019-75605038 MS.gene00638:CDS 25.0%
! ATTATGATAAGCTTGAAGAA+AGG - chr2.1:75603644-75603663 MS.gene00638:CDS 25.0%
! CAAATTATGCTGTAATCATA+TGG - chr2.1:75605208-75605227 MS.gene00638:CDS 25.0%
! CAACATCACAATAATCAAAA+GGG + chr2.1:75604674-75604693 None:intergenic 25.0%
! TACAATTTCCAGAACTATAT+TGG - chr2.1:75604217-75604236 MS.gene00638:intron 25.0%
! TATAAGATTAATCCTCAATC+GGG - chr2.1:75603613-75603632 MS.gene00638:CDS 25.0%
! TTAACGAATAAATACTCTGA+AGG - chr2.1:75603301-75603320 MS.gene00638:intron 25.0%
! TTATGATAAGCTTGAAGAAA+GGG - chr2.1:75603645-75603664 MS.gene00638:CDS 25.0%
! TTTATTGTGGTTAATAGTGT+GGG - chr2.1:75604338-75604357 MS.gene00638:intron 25.0%
!! ATAAGGCATTAAAGTCAATA+TGG + chr2.1:75604475-75604494 None:intergenic 25.0%
!! ATTTTTATGTTGTATCACCA+AGG - chr2.1:75605493-75605512 MS.gene00638:CDS 25.0%
!! CAGAGTATTTATTCGTTAAA+TGG + chr2.1:75603300-75603319 None:intergenic 25.0%
!! CATTTTCCTTACAATATTTG+TGG - chr2.1:75603825-75603844 MS.gene00638:CDS 25.0%
!! GATTAACTTGAAAGTGTATA+AGG + chr2.1:75604492-75604511 None:intergenic 25.0%
!! GTTAACTTTGAAAGTTTAGT+AGG - chr2.1:75603872-75603891 MS.gene00638:intron 25.0%
!! TAGATTTCAGTTTGACTTAA+TGG - chr2.1:75604306-75604325 MS.gene00638:intron 25.0%
!!! AGAAAAAGCGTCAATTTAAA+GGG - chr2.1:75603215-75603234 MS.gene00638:intron 25.0%
!!! ATATAGTTCTGGAAATTGTA+TGG + chr2.1:75604217-75604236 None:intergenic 25.0%
!!! ATTTTCTGTAATTTCTGGAT+GGG - chr2.1:75604522-75604541 MS.gene00638:intron 25.0%
!!! CGTTCTTATGTTTTTGTATA+CGG - chr2.1:75605257-75605276 MS.gene00638:CDS 25.0%
!!! GGTATAATTTTTTATCGGAA+GGG - chr2.1:75604735-75604754 MS.gene00638:CDS 25.0%
!!! TGGTATAATTTTTTATCGGA+AGG - chr2.1:75604734-75604753 MS.gene00638:CDS 25.0%
!!! TGTTGTTTTCTTTAACAGTA+TGG - chr2.1:75604620-75604639 MS.gene00638:intron 25.0%
!!! TTCTGAGAATTTTGTTTGTA+GGG - chr2.1:75603252-75603271 MS.gene00638:intron 25.0%
!!! TTGTTTTAATGCAATAGCAA+GGG + chr2.1:75604892-75604911 None:intergenic 25.0%
AATGGAATTATAATTCCTGG+AGG - chr2.1:75605381-75605400 MS.gene00638:CDS 30.0%
AGTCCTTGAAATTGTTCTTT+AGG - chr2.1:75604114-75604133 MS.gene00638:intron 30.0%
ATCTATATCAGCATGTGTAT+TGG + chr2.1:75604291-75604310 None:intergenic 30.0%
ATGAATCACCAATATAGTTC+TGG + chr2.1:75604228-75604247 None:intergenic 30.0%
ATGGATATTATACTCCGAAT+GGG - chr2.1:75603548-75603567 MS.gene00638:CDS 30.0%
ATTACAGAAAATGACCAACT+AGG + chr2.1:75604514-75604533 None:intergenic 30.0%
CACACTATTAACCACAATAA+AGG + chr2.1:75604339-75604358 None:intergenic 30.0%
CAGACAACCATTTATTACTT+TGG - chr2.1:75605018-75605037 MS.gene00638:CDS 30.0%
CTAACTCCACAAATATTGTA+AGG + chr2.1:75603834-75603853 None:intergenic 30.0%
CTAAGATACTTATTTGTGGT+GGG - chr2.1:75603683-75603702 MS.gene00638:CDS 30.0%
CTTTATTGTGGTTAATAGTG+TGG - chr2.1:75604337-75604356 MS.gene00638:intron 30.0%
GACAATGGAATTATAATTCC+TGG - chr2.1:75605378-75605397 MS.gene00638:CDS 30.0%
GCAATCAATAACAACAATGA+AGG + chr2.1:75603913-75603932 None:intergenic 30.0%
GTCCTTGAAATTGTTCTTTA+GGG - chr2.1:75604115-75604134 MS.gene00638:intron 30.0%
GTTGAAGAATTTCGTATTCT+AGG - chr2.1:75603004-75603023 MS.gene00638:intron 30.0%
TAAAAAATTATACCACCCCT+TGG + chr2.1:75604729-75604748 None:intergenic 30.0%
TAAGAACGAAATGTCACTAA+TGG + chr2.1:75605245-75605264 None:intergenic 30.0%
TAATCAATAAAACCCGATTG+AGG + chr2.1:75603628-75603647 None:intergenic 30.0%
TAATCTTGATCCTAAGTGTT+GGG - chr2.1:75603408-75603427 MS.gene00638:intron 30.0%
TATGTCAACTAGACTCATTT+AGG - chr2.1:75605128-75605147 MS.gene00638:CDS 30.0%
TCTATAATCTCGTATATAGC+AGG + chr2.1:75603190-75603209 None:intergenic 30.0%
TGAGAAATTGAGAGATAGAT+TGG + chr2.1:75602792-75602811 None:intergenic 30.0%
TGCTATTGCATTAAAACAAG+TGG - chr2.1:75604893-75604912 MS.gene00638:CDS 30.0%
TTAATCTTGATCCTAAGTGT+TGG - chr2.1:75603407-75603426 MS.gene00638:intron 30.0%
TTATCGATCACATTTGTAGT+AGG - chr2.1:75604071-75604090 MS.gene00638:intron 30.0%
! ATAGATGAACTTTGTTGCTT+AGG + chr2.1:75604011-75604030 None:intergenic 30.0%
! TCTTTAACAGTATGGTTTTC+TGG - chr2.1:75604628-75604647 MS.gene00638:intron 30.0%
!! ACTTTCAAGTTAATCCTAGT+TGG - chr2.1:75604497-75604516 MS.gene00638:intron 30.0%
!! CATTTTCTGTAATTTCTGGA+TGG - chr2.1:75604521-75604540 MS.gene00638:intron 30.0%
!! CTTCTGAGAATTTTGTTTGT+AGG - chr2.1:75603251-75603270 MS.gene00638:intron 30.0%
!! GAGAAAAAGCGTCAATTTAA+AGG - chr2.1:75603214-75603233 MS.gene00638:intron 30.0%
!! TGGTCATTTTCTGTAATTTC+TGG - chr2.1:75604517-75604536 MS.gene00638:intron 30.0%
!!! ATTGCTATTTTTGGTGACAA+TGG - chr2.1:75605363-75605382 MS.gene00638:CDS 30.0%
!!! CTTGTTTTAATGCAATAGCA+AGG + chr2.1:75604893-75604912 None:intergenic 30.0%
!!! GGGGTGGTATAATTTTTTAT+CGG - chr2.1:75604730-75604749 MS.gene00638:CDS 30.0%
AAGGAAAATGTTTCACACCT+TGG + chr2.1:75603815-75603834 None:intergenic 35.0%
AGACATGTTGCAGATAAATG+TGG - chr2.1:75603742-75603761 MS.gene00638:CDS 35.0%
ATTGCAGAAGACTATTTCGA+AGG - chr2.1:75605627-75605646 MS.gene00638:CDS 35.0%
ATTTGTGCAAAGGGCAATAA+TGG + chr2.1:75604558-75604577 None:intergenic 35.0%
CATGGATATTATACTCCGAA+TGG - chr2.1:75603547-75603566 MS.gene00638:CDS 35.0%
CCACAAACAGAGAAAGAAAA+CGG - chr2.1:75602935-75602954 MS.gene00638:CDS 35.0%
CCACCACAAATAAGTATCTT+AGG + chr2.1:75603685-75603704 None:intergenic 35.0%
CCTAAGATACTTATTTGTGG+TGG - chr2.1:75603682-75603701 MS.gene00638:CDS 35.0%
CCTGCACACCAAAAAAAATA+AGG + chr2.1:75605294-75605313 None:intergenic 35.0%
CGTCCTAAGATACTTATTTG+TGG - chr2.1:75603679-75603698 MS.gene00638:CDS 35.0%
GTCCCTAAAGAACAATTTCA+AGG + chr2.1:75604120-75604139 None:intergenic 35.0%
TCTATCATCTTCATCGTTGT+TGG + chr2.1:75602981-75603000 None:intergenic 35.0%
TGAGAGATAGATTGGATTGA+TGG + chr2.1:75602784-75602803 None:intergenic 35.0%
TGTAATCATATGGTTCAAGC+TGG - chr2.1:75605218-75605237 MS.gene00638:CDS 35.0%
TTAAAACGAGTAGACCACTA+TGG + chr2.1:75604419-75604438 None:intergenic 35.0%
TTATAATTCCTGGAGGAGTA+AGG - chr2.1:75605388-75605407 MS.gene00638:CDS 35.0%
! AATCTTGATCCTAAGTGTTG+GGG - chr2.1:75603409-75603428 MS.gene00638:intron 35.0%
! ACTAAATTGACGGATCGAAA+AGG + chr2.1:75604097-75604116 None:intergenic 35.0%
! ATGAACTTTGTTGCTTAGGA+TGG + chr2.1:75604007-75604026 None:intergenic 35.0%
! TGCAGGTAAATTTTACGAGA+AGG - chr2.1:75605308-75605327 MS.gene00638:CDS 35.0%
! TTTTAATGCAATAGCAAGGG+CGG + chr2.1:75604889-75604908 None:intergenic 35.0%
!! GCTAATTTTGCTGTGTATAC+TGG - chr2.1:75603463-75603482 MS.gene00638:CDS 35.0%
!!! CCTTATTTTTTTTGGTGTGC+AGG - chr2.1:75605291-75605310 MS.gene00638:CDS 35.0%
AAATTGCAAACATGCTGCAG+AGG - chr2.1:75605593-75605612 MS.gene00638:CDS 40.0%
AAGTTTAGTAGGGCTTGTGT+CGG - chr2.1:75603883-75603902 MS.gene00638:intron 40.0%
AATTGCAAACATGCTGCAGA+GGG - chr2.1:75605594-75605613 MS.gene00638:CDS 40.0%
AGAGACTCGATATCACTATC+TGG - chr2.1:75604391-75604410 MS.gene00638:intron 40.0%
AGAGGGATACTTCTTACTCA+GGG - chr2.1:75604774-75604793 MS.gene00638:CDS 40.0%
AGCAAAATTAGCCGAAGTAC+AGG + chr2.1:75603455-75603474 None:intergenic 40.0%
ATATAATACCTGTCAACCCC+AGG + chr2.1:75605055-75605074 None:intergenic 40.0%
ATCACTATCTGGATCCATAG+TGG - chr2.1:75604402-75604421 MS.gene00638:intron 40.0%
ATCAGCCATCGTCTCAAAAT+CGG + chr2.1:75605554-75605573 None:intergenic 40.0%
ATTGCACTTAGTCAACGAGT+TGG - chr2.1:75603928-75603947 MS.gene00638:intron 40.0%
CCAGAAACTTTCTTCCCATT+CGG + chr2.1:75603565-75603584 None:intergenic 40.0%
CGAATGGGAAGAAAGTTTCT+GGG - chr2.1:75603563-75603582 MS.gene00638:CDS 40.0%
GAACAAAACCAAGGAAGAGA+GGG - chr2.1:75604757-75604776 MS.gene00638:CDS 40.0%
GAATGGGAAGAAAGTTTCTG+GGG - chr2.1:75603564-75603583 MS.gene00638:CDS 40.0%
GAGTTCTTATCCTCGAGAAT+GGG - chr2.1:75603705-75603724 MS.gene00638:CDS 40.0%
GCGGCAATATGGTTATTATG+AGG + chr2.1:75604870-75604889 None:intergenic 40.0%
GGTTGTGATTGTAGAGGATT+CGG + chr2.1:75603062-75603081 None:intergenic 40.0%
TATAATACCTGTCAACCCCA+GGG + chr2.1:75605054-75605073 None:intergenic 40.0%
TCTCTTGGTTGTGATTGTAG+AGG + chr2.1:75603068-75603087 None:intergenic 40.0%
TGCATGTATGCCTTATACTC+AGG + chr2.1:75604924-75604943 None:intergenic 40.0%
TTAGCATAATCCCATTCTCG+AGG + chr2.1:75603718-75603737 None:intergenic 40.0%
TTAGCCGAAGTACAGGAATA+TGG + chr2.1:75603448-75603467 None:intergenic 40.0%
TTGCACTTAGTCAACGAGTT+GGG - chr2.1:75603929-75603948 MS.gene00638:intron 40.0%
! AAATACTCTGAAGGAATGCC+TGG - chr2.1:75603310-75603329 MS.gene00638:intron 40.0%
! AGCTGTGTTATTGTGTGACA+TGG - chr2.1:75603765-75603784 MS.gene00638:CDS 40.0%
! ATTTTACGAGAAGGTCTGTG+AGG - chr2.1:75605317-75605336 MS.gene00638:CDS 40.0%
! CCGTTTTCTTTCTCTGTTTG+TGG + chr2.1:75602938-75602957 None:intergenic 40.0%
! CTTTGTTGCTTAGGATGGAA+TGG + chr2.1:75604002-75604021 None:intergenic 40.0%
! TCAACGAGTTGGGCAATTAT+AGG - chr2.1:75603939-75603958 MS.gene00638:intron 40.0%
! TTCTGTAATTTCTGGATGGG+TGG - chr2.1:75604525-75604544 MS.gene00638:intron 40.0%
!! CTGCACTTTGCATTGACTTT+GGG - chr2.1:75605162-75605181 MS.gene00638:CDS 40.0%
!! GAAGGTACTTGAGAGCAATA+GGG - chr2.1:75605645-75605664 MS.gene00638:CDS 40.0%
!! TCTGCACTTTGCATTGACTT+TGG - chr2.1:75605161-75605180 MS.gene00638:CDS 40.0%
!! TTTTGTTTGTAGGGCTGTGA+TGG - chr2.1:75603261-75603280 MS.gene00638:intron 40.0%
AACCCCATAATTCTATCCCC+CGG + chr2.1:75603499-75603518 None:intergenic 45.0%
ACAACTCACAAGAGTCTTCG+AGG - chr2.1:75604702-75604721 MS.gene00638:CDS 45.0%
ACATTCACACCCCAACACTT+AGG + chr2.1:75603421-75603440 None:intergenic 45.0%
ATAATACCTGTCAACCCCAG+GGG + chr2.1:75605053-75605072 None:intergenic 45.0%
ATAGGGACATTCTTGAGCTC+CGG - chr2.1:75605662-75605681 MS.gene00638:CDS 45.0%
ATCACCTCGATCGGATTCTA+CGG + chr2.1:75603095-75603114 None:intergenic 45.0%
ATCGGAAGGGAACAAAACCA+AGG - chr2.1:75604748-75604767 MS.gene00638:CDS 45.0%
ATGGCAGAGTCCCTTTATTG+TGG - chr2.1:75604325-75604344 MS.gene00638:intron 45.0%
ATTCCTGGAGGAGTAAGGAT+AGG - chr2.1:75605393-75605412 MS.gene00638:CDS 45.0%
CAAACACCCTCTTGAAGTCA+TGG + chr2.1:75605527-75605546 None:intergenic 45.0%
CCGAATGGGAAGAAAGTTTC+TGG - chr2.1:75603562-75603581 MS.gene00638:CDS 45.0%
GAGAGGGATACTTCTTACTC+AGG - chr2.1:75604773-75604792 MS.gene00638:CDS 45.0%
GCAGCCATATTCCTGTACTT+CGG - chr2.1:75603441-75603460 MS.gene00638:CDS 45.0%
GGAACAAAACCAAGGAAGAG+AGG - chr2.1:75604756-75604775 MS.gene00638:CDS 45.0%
GGAGTTCTTATCCTCGAGAA+TGG - chr2.1:75603704-75603723 MS.gene00638:CDS 45.0%
GTATAAGGCATACATGCAGC+AGG - chr2.1:75604926-75604945 MS.gene00638:CDS 45.0%
GTATGCCTTATACTCAGGAG+TGG + chr2.1:75604919-75604938 None:intergenic 45.0%
GTGACATGGCTCAGATTAGT+GGG - chr2.1:75603779-75603798 MS.gene00638:CDS 45.0%
GTGGTTAATAGTGTGGGTCA+TGG - chr2.1:75604344-75604363 MS.gene00638:intron 45.0%
GTTGAGAAGAAAATGCCGCT+TGG - chr2.1:75604983-75605002 MS.gene00638:CDS 45.0%
TCCATGACTAGTATTCCCTC+CGG + chr2.1:75603533-75603552 None:intergenic 45.0%
TGATCAACCCTTACAGGTAG+CGG - chr2.1:75603162-75603181 MS.gene00638:CDS 45.0%
TGTGACATGGCTCAGATTAG+TGG - chr2.1:75603778-75603797 MS.gene00638:CDS 45.0%
TTACCTATCCTTACTCCTCC+AGG + chr2.1:75605399-75605418 None:intergenic 45.0%
TTGTGGTTCCATGAGCTGAA+GGG + chr2.1:75602921-75602940 None:intergenic 45.0%
TTTCGTGACTCGAGATCAAG+TGG + chr2.1:75603121-75603140 None:intergenic 45.0%
TTTGTGGTTCCATGAGCTGA+AGG + chr2.1:75602922-75602941 None:intergenic 45.0%
! AAAATGCCGCTTGGTAACTG+GGG - chr2.1:75604992-75605011 MS.gene00638:CDS 45.0%
! AGAAAATGCCGCTTGGTAAC+TGG - chr2.1:75604990-75605009 MS.gene00638:CDS 45.0%
! GAAAATGCCGCTTGGTAACT+GGG - chr2.1:75604991-75605010 MS.gene00638:CDS 45.0%
! GTTTTCCCATCATTGCAAGG+CGG - chr2.1:75604843-75604862 MS.gene00638:CDS 45.0%
! TGCAACACAGTTTGCTTTGC+CGG - chr2.1:75605702-75605721 MS.gene00638:CDS 45.0%
!! AGAAGTATCCCTCTCTTCCT+TGG + chr2.1:75604768-75604787 None:intergenic 45.0%
!! CATGACTTCAAGAGGGTGTT+TGG - chr2.1:75605525-75605544 MS.gene00638:CDS 45.0%
!! CGAAGGTACTTGAGAGCAAT+AGG - chr2.1:75605644-75605663 MS.gene00638:CDS 45.0%
!! GCTGTTTTCCCATCATTGCA+AGG - chr2.1:75604840-75604859 MS.gene00638:CDS 45.0%
!! TATGGTTTTCTGGTCCTTGC+AGG - chr2.1:75604638-75604657 MS.gene00638:intron 45.0%
AAGAGTCTTCGAGGTCCAAG+GGG - chr2.1:75604711-75604730 MS.gene00638:CDS 50.0%
AAGTGGACGATCACCTCGAT+CGG + chr2.1:75603104-75603123 None:intergenic 50.0%
ACAAGAGTCTTCGAGGTCCA+AGG - chr2.1:75604709-75604728 MS.gene00638:CDS 50.0%
ACACCCTCTTGAAGTCATGG+CGG + chr2.1:75605524-75605543 None:intergenic 50.0%
ACATTCTTGAGCTCCGGGTA+CGG - chr2.1:75605668-75605687 MS.gene00638:CDS 50.0%
AGTGGCCACTCCTGAGTATA+AGG - chr2.1:75604911-75604930 MS.gene00638:CDS 50.0%
ATGCCTGGTGCACGTTACTA+TGG - chr2.1:75603325-75603344 MS.gene00638:intron 50.0%
ATGGGGTTGGATACTCCTTC+CGG - chr2.1:75603511-75603530 MS.gene00638:CDS 50.0%
CAAAAGCTTCAACCCGTACC+CGG + chr2.1:75605684-75605703 None:intergenic 50.0%
CAAGAGTCTTCGAGGTCCAA+GGG - chr2.1:75604710-75604729 MS.gene00638:CDS 50.0%
CAATAGCAAGGGCGGCAATA+TGG + chr2.1:75604881-75604900 None:intergenic 50.0%
GGATTCTACGGAAGCTCTCT+TGG + chr2.1:75603083-75603102 None:intergenic 50.0%
GGGGGATAGAATTATGGGGT+TGG - chr2.1:75603498-75603517 MS.gene00638:CDS 50.0%
GTATACTGGATTGCTGTCGC+CGG - chr2.1:75603477-75603496 MS.gene00638:CDS 50.0%
TAGGGACATTCTTGAGCTCC+GGG - chr2.1:75605663-75605682 MS.gene00638:CDS 50.0%
TATACTGGATTGCTGTCGCC+GGG - chr2.1:75603478-75603497 MS.gene00638:CDS 50.0%
TCCGGAGGGAATACTAGTCA+TGG - chr2.1:75603529-75603548 MS.gene00638:CDS 50.0%
TCGCCGGGGGATAGAATTAT+GGG - chr2.1:75603493-75603512 MS.gene00638:CDS 50.0%
TGACTAGTATTCCCTCCGGA+AGG + chr2.1:75603529-75603548 None:intergenic 50.0%
TGTGGTTCCATGAGCTGAAG+GGG + chr2.1:75602920-75602939 None:intergenic 50.0%
TTCCATGAGCTGAAGGGGAA+CGG + chr2.1:75602915-75602934 None:intergenic 50.0%
! AAATGCCGCTTGGTAACTGG+GGG - chr2.1:75604993-75605012 MS.gene00638:CDS 50.0%
! GCAACACAGTTTGCTTTGCC+GGG - chr2.1:75605703-75605722 MS.gene00638:CDS 50.0%
! TTTGGGATTTAAGGCCCCTG+GGG - chr2.1:75605036-75605055 MS.gene00638:CDS 50.0%
!! ACTTTGGGATTTAAGGCCCC+TGG - chr2.1:75605034-75605053 MS.gene00638:CDS 50.0%
!! CTTTGGGATTTAAGGCCCCT+GGG - chr2.1:75605035-75605054 MS.gene00638:CDS 50.0%
!! GACTTCAAGAGGGTGTTTGG+AGG - chr2.1:75605528-75605547 MS.gene00638:CDS 50.0%
!! TAGTGGGCTAATTGCAGCCA+AGG - chr2.1:75603795-75603814 MS.gene00638:CDS 50.0%
AAAAGCCGCGGTTCGATCGT+GGG - chr2.1:75603138-75603157 MS.gene00638:CDS 55.0%
AACATGCTGCAGAGGGAGCA+TGG - chr2.1:75605601-75605620 MS.gene00638:CDS 55.0%
ACCCTCTTGAAGTCATGGCG+GGG + chr2.1:75605522-75605541 None:intergenic 55.0%
AGCAGGATCCGCTACCTGTA+AGG + chr2.1:75603173-75603192 None:intergenic 55.0%
AGGGTTCACACACTCCTGCA+AGG + chr2.1:75604655-75604674 None:intergenic 55.0%
ATACTGGATTGCTGTCGCCG+GGG - chr2.1:75603479-75603498 MS.gene00638:CDS 55.0%
ATGAGCTGAAGGGGAACGGT+GGG + chr2.1:75602911-75602930 None:intergenic 55.0%
CAAAGCACGCTCGCAGCAAA+GGG + chr2.1:75603380-75603399 None:intergenic 55.0%
CACCCTCTTGAAGTCATGGC+GGG + chr2.1:75605523-75605542 None:intergenic 55.0%
CATTCTTGAGCTCCGGGTAC+GGG - chr2.1:75605669-75605688 MS.gene00638:CDS 55.0%
CCACCATAGTAACGTGCACC+AGG + chr2.1:75603331-75603350 None:intergenic 55.0%
CCTGGTGCACGTTACTATGG+TGG - chr2.1:75603328-75603347 MS.gene00638:intron 55.0%
CGCCGGGGGATAGAATTATG+GGG - chr2.1:75603494-75603513 MS.gene00638:CDS 55.0%
CTGTACCCCCAGTTACCAAG+CGG + chr2.1:75605001-75605020 None:intergenic 55.0%
GAAGCTGGATTCGAGGTGGA+GGG + chr2.1:75602867-75602886 None:intergenic 55.0%
GAGGTCCGCCTTGCAATGAT+GGG + chr2.1:75604851-75604870 None:intergenic 55.0%
GCAGGATCCGCTACCTGTAA+GGG + chr2.1:75603172-75603191 None:intergenic 55.0%
GCTTCCGTAGAATCCGATCG+AGG - chr2.1:75603088-75603107 MS.gene00638:intron 55.0%
GGTTGGATACTCCTTCCGGA+GGG - chr2.1:75603515-75603534 MS.gene00638:CDS 55.0%
GTCGCCGGGGGATAGAATTA+TGG - chr2.1:75603492-75603511 MS.gene00638:CDS 55.0%
GTGGGGTGATCAACCCTTAC+AGG - chr2.1:75603156-75603175 MS.gene00638:CDS 55.0%
TCTCGAGTCACGAAAAGCCG+CGG - chr2.1:75603126-75603145 MS.gene00638:CDS 55.0%
TGAGGTCCGCCTTGCAATGA+TGG + chr2.1:75604852-75604871 None:intergenic 55.0%
! ACATGCTGCAGAGGGAGCAT+GGG - chr2.1:75605602-75605621 MS.gene00638:CDS 55.0%
! GGACAGGGTTTGATGGATCG+CGG + chr2.1:75602889-75602908 None:intergenic 55.0%
! GTTTGATGGATCGCGGAAGC+TGG + chr2.1:75602882-75602901 None:intergenic 55.0%
!! AGGGCTGTGATGGAAGCACT+TGG - chr2.1:75603271-75603290 MS.gene00638:intron 55.0%
!!! GGAGGCCGATTTTGAGACGA+TGG - chr2.1:75605546-75605565 MS.gene00638:CDS 55.0%
AAAGCCGCGGTTCGATCGTG+GGG - chr2.1:75603139-75603158 MS.gene00638:CDS 60.0%
ACCCCCGCCATGACTTCAAG+AGG - chr2.1:75605517-75605536 MS.gene00638:CDS 60.0%
ACGGTGGGGACAGGGTTTGA+TGG + chr2.1:75602896-75602915 None:intergenic 60.0%
AGTCGTCGGGAATCGGTGGA+CGG + chr2.1:75602838-75602857 None:intergenic 60.0%
AGTCTTCGAGGTCCAAGGGG+TGG - chr2.1:75604714-75604733 MS.gene00638:CDS 60.0%
ATCACCCCACGATCGAACCG+CGG + chr2.1:75603146-75603165 None:intergenic 60.0%
ATGGAGTCGTCGGGAATCGG+TGG + chr2.1:75602842-75602861 None:intergenic 60.0%
CACCGTTCCCCTTCAGCTCA+TGG - chr2.1:75602910-75602929 MS.gene00638:CDS 60.0%
CATGAGCTGAAGGGGAACGG+TGG + chr2.1:75602912-75602931 None:intergenic 60.0%
CCAAAGCACGCTCGCAGCAA+AGG + chr2.1:75603381-75603400 None:intergenic 60.0%
CCCCCGCCATGACTTCAAGA+GGG - chr2.1:75605518-75605537 MS.gene00638:CDS 60.0%
CCCTCTTGAAGTCATGGCGG+GGG + chr2.1:75605521-75605540 None:intergenic 60.0%
CCTTTGCTGCGAGCGTGCTT+TGG - chr2.1:75603378-75603397 MS.gene00638:intron 60.0%
GAAAAGCCGCGGTTCGATCG+TGG - chr2.1:75603137-75603156 MS.gene00638:CDS 60.0%
GATCGCGGAAGCTGGATTCG+AGG + chr2.1:75602874-75602893 None:intergenic 60.0%
GCGATGGAGTCGTCGGGAAT+CGG + chr2.1:75602845-75602864 None:intergenic 60.0%
GGAAGCTGGATTCGAGGTGG+AGG + chr2.1:75602868-75602887 None:intergenic 60.0%
GGGTTGGATACTCCTTCCGG+AGG - chr2.1:75603514-75603533 MS.gene00638:CDS 60.0%
TACTGGATTGCTGTCGCCGG+GGG - chr2.1:75603480-75603499 MS.gene00638:CDS 60.0%
TGAGCTGAAGGGGAACGGTG+GGG + chr2.1:75602910-75602929 None:intergenic 60.0%
TTAAGGCCCCTGGGGTTGAC+AGG - chr2.1:75605044-75605063 MS.gene00638:CDS 60.0%
!! AAGTCATGGCGGGGGTACCT+TGG + chr2.1:75605513-75605532 None:intergenic 60.0%
CGCGGAAGCTGGATTCGAGG+TGG + chr2.1:75602871-75602890 None:intergenic 65.0%
GAAGGGGAACGGTGGGGACA+GGG + chr2.1:75602904-75602923 None:intergenic 65.0%
GGATTCGAGGTGGAGGGCGA+TGG + chr2.1:75602861-75602880 None:intergenic 65.0%
GTGGAGGGCGATGGAGTCGT+CGG + chr2.1:75602852-75602871 None:intergenic 65.0%
TGAAGGGGAACGGTGGGGAC+AGG + chr2.1:75602905-75602924 None:intergenic 65.0%
TGGAGGGCGATGGAGTCGTC+GGG + chr2.1:75602851-75602870 None:intergenic 65.0%
TCGGGAATCGGTGGACGGCG+CGG + chr2.1:75602833-75602852 None:intergenic 70.0%
GGAATCGGTGGACGGCGCGG+AGG + chr2.1:75602830-75602849 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 75602767 75605738 75602767 ID=MS.gene00638
chr2.1 mRNA 75602767 75605738 75602767 ID=MS.gene00638.t1;Parent=MS.gene00638
chr2.1 exon 75604689 75605738 75604689 ID=MS.gene00638.t1.exon1;Parent=MS.gene00638.t1
chr2.1 CDS 75604689 75605738 75604689 ID=cds.MS.gene00638.t1;Parent=MS.gene00638.t1
chr2.1 exon 75603440 75603845 75603440 ID=MS.gene00638.t1.exon2;Parent=MS.gene00638.t1
chr2.1 CDS 75603440 75603845 75603440 ID=cds.MS.gene00638.t1;Parent=MS.gene00638.t1
chr2.1 exon 75603091 75603192 75603091 ID=MS.gene00638.t1.exon3;Parent=MS.gene00638.t1
chr2.1 CDS 75603091 75603192 75603091 ID=cds.MS.gene00638.t1;Parent=MS.gene00638.t1
chr2.1 exon 75602767 75602990 75602767 ID=MS.gene00638.t1.exon4;Parent=MS.gene00638.t1
chr2.1 CDS 75602767 75602990 75602767 ID=cds.MS.gene00638.t1;Parent=MS.gene00638.t1
Gene Sequence

>MS.gene00638

ATGGATCTATCACACCATCAATCCAATCTATCTCTCAATTTCTCATCTTCTCACGCTTCACCTCCGCGCCGTCCACCGATTCCCGACGACTCCATCGCCCTCCACCTCGAATCCAGCTTCCGCGATCCATCAAACCCTGTCCCCACCGTTCCCCTTCAGCTCATGGAACCACAAACAGAGAAAGAAAACGGTAACGCTATCGATATCGAATCCAACAACGATGAAGATGATAGAGAAGTTGAAGAATTTCGTATTCTAGGTCATTCAATGTGTATCAAAAGACGAAGAGATTCCGAATCCTCTACAATCACAACCAAGAGAGCTTCCGTAGAATCCGATCGAGGTGATCGTCCACTTGATCTCGAGTCACGAAAAGCCGCGGTTCGATCGTGGGGTGATCAACCCTTACAGGTAGCGGATCCTGCTATATACGAGATTATAGAAAAAGAGAAAAAGCGTCAATTTAAAGGGATTGAATTGATAGCTTCTGAGAATTTTGTTTGTAGGGCTGTGATGGAAGCACTTGGAAGCCATTTAACGAATAAATACTCTGAAGGAATGCCTGGTGCACGTTACTATGGTGGAAATCAATATATAGATGAAATTGAAACCCTTTGCTGCGAGCGTGCTTTGGCTGCGTTTAATCTTGATCCTAAGTGTTGGGGTGTGAATGTGCAGCCATATTCCTGTACTTCGGCTAATTTTGCTGTGTATACTGGATTGCTGTCGCCGGGGGATAGAATTATGGGGTTGGATACTCCTTCCGGAGGGAATACTAGTCATGGATATTATACTCCGAATGGGAAGAAAGTTTCTGGGGCTTCAATATTCTTTGAGAGTTTAGCTTATAAGATTAATCCTCAATCGGGTTTTATTGATTATGATAAGCTTGAAGAAAGGGCACTTGATTTTCGTCCTAAGATACTTATTTGTGGTGGGAGTTCTTATCCTCGAGAATGGGATTATGCTAAGTTTAGACATGTTGCAGATAAATGTGGAGCTGTGTTATTGTGTGACATGGCTCAGATTAGTGGGCTAATTGCAGCCAAGGTGTGAAACATTTTCCTTACAATATTTGTGGAGTTAGAATTTCTTACTGTTTCTAGTTAACTTTGAAAGTTTAGTAGGGCTTGTGTCGGTGTTCCTTCATTGTTGTTATTGATTGCACTTAGTCAACGAGTTGGGCAATTATAGGATTTTTTTTTATTATTACGATATGATATGATTCTTTACCATTCCATCCTAAGCAACAAAGTTCATCTATGACTTAGCACATATTTTGAATTAGTCCCTAAAATTGAATTTTATCGATCACATTTGTAGTAGGCCTTTTCGATCCGTCAATTTAGTCCTTGAAATTGTTCTTTAGGGACAATGTAATCGAGAATTTTTTAAATTATGGGACCATTTTATAATTTCGTTAACTTCAAAGACTAAATTGTCAACACCATACAATTTCCAGAACTATATTGGTGATTCATTCTTTTTAAAATTCACACCTGTTTAATCTTTTATGTTTTACCAATACACATGCTGATATAGATTTCAGTTTGACTTAATGGCAGAGTCCCTTTATTGTGGTTAATAGTGTGGGTCATGGACTATGAGAATTCTGCTTAGTGTCAGAGACTCGATATCACTATCTGGATCCATAGTGGTCTACTCGTTTTAATAAAATTTTCTGCTAATCTGAATACTGTTTTGTCCATATTGACTTTAATGCCTTATACACTTTCAAGTTAATCCTAGTTGGTCATTTTCTGTAATTTCTGGATGGGTGGTTTAAGTCCATTATTGCCCTTTGCACAAATATCTAATAAATTGTGTACTTTTAATATGAAGATATAGATACTTGTTGTTTTCTTTAACAGTATGGTTTTCTGGTCCTTGCAGGAGTGTGTGAACCCTTTTGATTATTGTGATGTTGTTACATCGACAACTCACAAGAGTCTTCGAGGTCCAAGGGGTGGTATAATTTTTTATCGGAAGGGAACAAAACCAAGGAAGAGAGGGATACTTCTTACTCAGGGACATGAAAGTGATCAATATGACTTTGAAGAAAAGATAAACTTTGCTGTTTTCCCATCATTGCAAGGCGGACCTCATAATAACCATATTGCCGCCCTTGCTATTGCATTAAAACAAGTGGCCACTCCTGAGTATAAGGCATACATGCAGCAGGTGAAGAAGAATGCTCAAGCTTTAGCATCTGCTCTGTTGAGAAGAAAATGCCGCTTGGTAACTGGGGGTACAGACAACCATTTATTACTTTGGGATTTAAGGCCCCTGGGGTTGACAGGTATTATATGATCGTGTGATATTTTGACTATATAAGTTGCATCTTTGTTTGTTAAGCGCTAATATGTCAACTAGACTCATTTAGGTCGCATGTTTTCTGCACTTTGCATTGACTTTGGGTTTGATAGCTACTTTTGTGATCACAAATTATGCTGTAATCATATGGTTCAAGCTGGACCATTAGTGACATTTCGTTCTTATGTTTTTGTATACGGTAACAACAATACCTTATTTTTTTTGGTGTGCAGGTAAATTTTACGAGAAGGTCTGTGAGGCATGTCATATTACTTTGAATAAAATTGCTATTTTTGGTGACAATGGAATTATAATTCCTGGAGGAGTAAGGATAGGTAAGCAATAATTTTATATGCTTGAATCTTTATGTTTTGTATGCTCAAGATATTCGATTGACAGTGCATTCTTATGAGATTTTTATGTTGTATCACCAAGGTACCCCCGCCATGACTTCAAGAGGGTGTTTGGAGGCCGATTTTGAGACGATGGCTGATTTTCTCTTTAGAGCTGCACAAATTGCAAACATGCTGCAGAGGGAGCATGGGAAATTGCAGAAGACTATTTCGAAGGTACTTGAGAGCAATAGGGACATTCTTGAGCTCCGGGTACGGGTTGAAGCTTTTGCAACACAGTTTGCTTTGCCGGGTTTTGACATTTGA
Protein sequence

>MS.gene00638.t1

MDLSHHQSNLSLNFSSSHASPPRRPPIPDDSIALHLESSFRDPSNPVPTVPLQLMEPQTEKENGNAIDIESNNDEDDREVEEFRILGHSMCIKRRRDSESSTITTKRASVESDRGDRPLDLESRKAAVRSWGDQPLQVADPAIYEIIEKEKKRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGMPGARYYGGNQYIDEIETLCCERALAAFNLDPKCWGVNVQPYSCTSANFAVYTGLLSPGDRIMGLDTPSGGNTSHGYYTPNGKKVSGASIFFESLAYKINPQSGFIDYDKLEERALDFRPKILICGGSSYPREWDYAKFRHVADKCGAVLLCDMAQISGLIAAKECVNPFDYCDVVTSTTHKSLRGPRGGIIFYRKGTKPRKRGILLTQGHESDQYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALASALLRRKCRLVTGGTDNHLLLWDLRPLGLTGKFYEKVCEACHITLNKIAIFGDNGIIIPGGVRIGTPAMTSRGCLEADFETMADFLFRAAQIANMLQREHGKLQKTISKVLESNRDILELRVRVEAFATQFALPGFDI