AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene072040

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072040.t1 MTR_2g006570 98.651 593 8 0 1 593 1 593 0.0 1222
MS.gene072040.t1 MTR_2g006570 98.815 422 5 0 172 593 1 422 0.0 880
MS.gene072040.t1 MTR_3g073470 66.275 596 168 8 7 592 4 576 0.0 800
MS.gene072040.t1 MTR_8g081510 64.009 464 162 1 128 591 4 462 0.0 643
MS.gene072040.t1 MTR_3g084310 64.009 464 162 1 128 591 4 462 0.0 638
MS.gene072040.t1 MTR_3g084310 67.486 366 114 1 128 493 4 364 0.0 531
MS.gene072040.t1 MTR_5g030950 53.928 471 202 6 130 592 47 510 1.79e-170 494
MS.gene072040.t1 MTR_5g067060 53.004 466 207 5 133 593 42 500 8.47e-170 492
MS.gene072040.t1 MTR_2g018290 52.034 467 203 5 130 590 81 532 4.79e-166 484
MS.gene072040.t1 MTR_7g108420 43.820 445 200 10 161 591 1 409 2.63e-107 329
MS.gene072040.t1 MTR_3g062030 49.367 79 36 1 403 481 13 87 2.17e-15 76.3
MS.gene072040.t1 MTR_1g073580 39.583 96 58 0 446 541 83 178 2.83e-15 76.3
MS.gene072040.t1 MTR_1g073580 38.158 76 45 1 293 368 10 83 1.91e-12 67.8
MS.gene072040.t1 MTR_7g070020 47.887 71 30 1 465 528 1 71 7.50e-15 71.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072040.t1 AT1G22020 69.551 601 162 4 7 593 6 599 0.0 864
MS.gene072040.t1 AT1G22020 69.551 601 162 4 7 593 6 599 0.0 864
MS.gene072040.t1 AT1G36370 70.420 595 168 4 1 590 1 592 0.0 846
MS.gene072040.t1 AT4G13930 64.009 464 162 1 128 591 4 462 0.0 632
MS.gene072040.t1 AT4G13890 62.876 466 168 1 128 593 4 464 0.0 621
MS.gene072040.t1 AT4G13890 65.903 393 129 1 128 520 4 391 0.0 552
MS.gene072040.t1 AT4G37930 54.352 471 200 6 130 592 46 509 2.48e-176 509
MS.gene072040.t1 AT4G32520 50.837 478 211 5 119 590 69 528 1.26e-168 490
MS.gene072040.t1 AT4G32520 50.837 478 211 5 119 590 69 528 1.26e-168 490
MS.gene072040.t1 AT5G26780 52.866 471 207 6 130 592 46 509 2.63e-168 489
MS.gene072040.t1 AT5G26780 52.866 471 207 6 130 592 46 509 2.63e-168 489
MS.gene072040.t1 AT5G26780 51.129 487 207 7 130 592 46 525 3.78e-164 479
MS.gene072040.t1 AT5G26780 51.129 487 207 7 130 592 46 525 3.78e-164 479

Find 162 sgRNAs with CRISPR-Local

Find 256 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTATTACTTTGGGATTTA+AGG 0.118090 2.4:-76005598 MS.gene072040:CDS
GTTGAAGAATTTCGTATTCT+AGG 0.184768 2.4:-76007622 MS.gene072040:CDS
CAGAGTATTTATTCGTTAAA+TGG 0.201982 2.4:+76007329 None:intergenic
CCGAATGGGAAGAAAGTTTC+TGG 0.213302 2.4:-76007064 MS.gene072040:CDS
TGCAACACAGTTTGCTTTGC+CGG 0.255179 2.4:-76004923 MS.gene072040:CDS
CGAAGGTACTTGAGAGCAAT+AGG 0.295279 2.4:-76004981 MS.gene072040:CDS
AGAAAATGCCGCTTGGTAAC+TGG 0.309679 2.4:-76005635 MS.gene072040:CDS
TTAAATCCCAAAGTAATAAA+TGG 0.319511 2.4:+76005600 None:intergenic
TGAGAAATTGAGAGATAGAT+TGG 0.320061 2.4:+76007837 None:intergenic
AGTGGCCACTCCTGAGTATA+AGG 0.321450 2.4:-76005714 MS.gene072040:CDS
TCTATCATCTTCATCGTTGT+TGG 0.322696 2.4:+76007648 None:intergenic
CAGACAACCATTTATTACTT+TGG 0.331502 2.4:-76005607 MS.gene072040:CDS
TAATCTTGATCCTAAGTGTT+GGG 0.334502 2.4:-76007218 MS.gene072040:CDS
GCTTTGCTGCGAGCGTGCTT+TGG 0.338716 2.4:-76007248 MS.gene072040:CDS
AGACAACCATTTATTACTTT+GGG 0.342729 2.4:-76005606 MS.gene072040:CDS
ACTTTGGGATTTAAGGCCCC+TGG 0.351644 2.4:-76005591 MS.gene072040:CDS
CAATAGCAAGGGCGGCAATA+TGG 0.355108 2.4:+76005747 None:intergenic
CCACCACAAATAAGTATCTT+AGG 0.356752 2.4:+76006944 None:intergenic
CATGACTTCAAGAGGGTGTT+TGG 0.369981 2.4:-76005100 MS.gene072040:CDS
TGAAGGGGAACGGTGGGGAC+AGG 0.380209 2.4:+76007724 None:intergenic
GACAATGGAATTATAATTCC+TGG 0.388060 2.4:-76005247 MS.gene072040:CDS
GGTTGTGATTGTAGAGGATT+CGG 0.392422 2.4:+76007567 None:intergenic
CCAGAAACTTTCTTCCCATT+CGG 0.397392 2.4:+76007064 None:intergenic
TTAGCCGAAGTACAGGAATA+TGG 0.398254 2.4:+76007181 None:intergenic
ATCAGCCATCGTCTCAAAAT+CGG 0.409423 2.4:+76005074 None:intergenic
ATGCCTGGTGCACGTTACTA+TGG 0.415234 2.4:-76007301 MS.gene072040:CDS
ATGGGGTTGGATACTCCTTC+CGG 0.419166 2.4:-76007115 MS.gene072040:CDS
AGCAGGATCCGCTACCTGTA+AGG 0.422442 2.4:+76007456 None:intergenic
TGAGAGATAGATTGGATTGA+TGG 0.427231 2.4:+76007845 None:intergenic
TTATAAGATTAATCCTCAAT+CGG 0.429225 2.4:-76007014 MS.gene072040:CDS
CTTTGGGATTTAAGGCCCCT+GGG 0.430295 2.4:-76005590 MS.gene072040:CDS
GCGATGGAGTCGTCGGGAAT+CGG 0.431171 2.4:+76007784 None:intergenic
ACAACATCACAATAATCAAA+AGG 0.431468 2.4:+76005953 None:intergenic
TGAGGTCCGCCTTGCAATGA+TGG 0.431877 2.4:+76005776 None:intergenic
CACCGTTCCCCTTCAGCTCA+TGG 0.437513 2.4:-76007716 MS.gene072040:CDS
CGAATGGGAAGAAAGTTTCT+GGG 0.444376 2.4:-76007063 MS.gene072040:CDS
GGATTCTACGGAAGCTCTCT+TGG 0.445479 2.4:+76007546 None:intergenic
GTTTGATGGATCGCGGAAGC+TGG 0.451254 2.4:+76007747 None:intergenic
CGTCCTAAGATACTTATTTG+TGG 0.451580 2.4:-76006947 MS.gene072040:CDS
AGAAGTATCCCTCTCTTCCT+TGG 0.451637 2.4:+76005860 None:intergenic
TTAAGGCCCCTGGGGTTGAC+AGG 0.455853 2.4:-76005581 MS.gene072040:intron
GTGGGGTGATCAACCCTTAC+AGG 0.456045 2.4:-76007470 MS.gene072040:CDS
TCTATAATCTCGTATATAGC+AGG 0.459587 2.4:+76007439 None:intergenic
CATTCTTGAGCTCCGGGTAC+GGG 0.461291 2.4:-76004956 MS.gene072040:CDS
ACATTCTTGAGCTCCGGGTA+CGG 0.461313 2.4:-76004957 MS.gene072040:CDS
TATAAGATTAATCCTCAATC+GGG 0.462240 2.4:-76007013 MS.gene072040:CDS
ATTATGATAAGCTTGAAGAA+AGG 0.464865 2.4:-76006982 MS.gene072040:CDS
GAAAATGCCGCTTGGTAACT+GGG 0.468450 2.4:-76005634 MS.gene072040:CDS
ATAGGGACATTCTTGAGCTC+CGG 0.469357 2.4:-76004963 MS.gene072040:CDS
TATACTGGATTGCTGTCGCC+GGG 0.478319 2.4:-76007148 MS.gene072040:CDS
GGAGTTCTTATCCTCGAGAA+TGG 0.479061 2.4:-76006922 MS.gene072040:CDS
TTATGATAAGCTTGAAGAAA+GGG 0.479642 2.4:-76006981 MS.gene072040:CDS
GTATACTGGATTGCTGTCGC+CGG 0.479657 2.4:-76007149 MS.gene072040:CDS
AGCAAAATTAGCCGAAGTAC+AGG 0.484132 2.4:+76007174 None:intergenic
GCAACACAGTTTGCTTTGCC+GGG 0.486245 2.4:-76004922 MS.gene072040:CDS
GTGGAGGGCGATGGAGTCGT+CGG 0.486855 2.4:+76007777 None:intergenic
TGGAGGGCGATGGAGTCGTC+GGG 0.490866 2.4:+76007778 None:intergenic
AACATGCTGCAGAGGGAGCA+TGG 0.493304 2.4:-76005024 MS.gene072040:CDS
CACCCTCTTGAAGTCATGGC+GGG 0.494924 2.4:+76005105 None:intergenic
TGCTATTGCATTAAAACAAG+TGG 0.496306 2.4:-76005732 MS.gene072040:CDS
AAATACTCTGAAGGAATGCC+TGG 0.501098 2.4:-76007316 MS.gene072040:CDS
TTACCTATCCTTACTCCTCC+AGG 0.504409 2.4:+76005229 None:intergenic
TTAATCTTGATCCTAAGTGT+TGG 0.507914 2.4:-76007219 MS.gene072040:CDS
CATGGATATTATACTCCGAA+TGG 0.509491 2.4:-76007079 MS.gene072040:CDS
GAAGGTACTTGAGAGCAATA+GGG 0.510496 2.4:-76004980 MS.gene072040:CDS
ACGGTGGGGACAGGGTTTGA+TGG 0.511010 2.4:+76007733 None:intergenic
GGAAGCTGGATTCGAGGTGG+AGG 0.511850 2.4:+76007761 None:intergenic
AATCTTGATCCTAAGTGTTG+GGG 0.512037 2.4:-76007217 MS.gene072040:CDS
GAGTTCTTATCCTCGAGAAT+GGG 0.512092 2.4:-76006921 MS.gene072040:CDS
GGATTCGAGGTGGAGGGCGA+TGG 0.513782 2.4:+76007768 None:intergenic
CCACAAACAGAGAAAGAAAA+CGG 0.514774 2.4:-76007691 MS.gene072040:CDS
ACAACTCACAAGAGTCTTCG+AGG 0.517309 2.4:-76005923 MS.gene072040:CDS
ATATAATACCTGTCAACCCC+AGG 0.518740 2.4:+76005573 None:intergenic
CCTAAGATACTTATTTGTGG+TGG 0.520445 2.4:-76006944 MS.gene072040:CDS
TTATAATTCCTGGAGGAGTA+AGG 0.522728 2.4:-76005237 MS.gene072040:CDS
TAGGGACATTCTTGAGCTCC+GGG 0.524029 2.4:-76004962 MS.gene072040:CDS
ACAAGAGTCTTCGAGGTCCA+AGG 0.527206 2.4:-76005916 MS.gene072040:CDS
ATGAGCTGAAGGGGAACGGT+GGG 0.527250 2.4:+76007718 None:intergenic
AAAAGCCGCGGTTCGATCGT+GGG 0.528207 2.4:-76007488 MS.gene072040:CDS
CAAGAGTCTTCGAGGTCCAA+GGG 0.534687 2.4:-76005915 MS.gene072040:CDS
CAACATCACAATAATCAAAA+GGG 0.534805 2.4:+76005954 None:intergenic
GAAAAGCCGCGGTTCGATCG+TGG 0.537478 2.4:-76007489 MS.gene072040:CDS
ATGGATATTATACTCCGAAT+GGG 0.537996 2.4:-76007078 MS.gene072040:CDS
CTAAGATACTTATTTGTGGT+GGG 0.538564 2.4:-76006943 MS.gene072040:CDS
GAAGGGGAACGGTGGGGACA+GGG 0.539433 2.4:+76007725 None:intergenic
TGCATGTATGCCTTATACTC+AGG 0.539801 2.4:+76005704 None:intergenic
CCACCATAGTAACGTGCACC+AGG 0.539950 2.4:+76007298 None:intergenic
ATCACCTCGATCGGATTCTA+CGG 0.544145 2.4:+76007534 None:intergenic
TTTGTGGTTCCATGAGCTGA+AGG 0.545508 2.4:+76007707 None:intergenic
TGTGACATGGCTCAGATTAG+TGG 0.548967 2.4:-76006848 MS.gene072040:CDS
GACTTCAAGAGGGTGTTTGG+AGG 0.553311 2.4:-76005097 MS.gene072040:CDS
GATCGCGGAAGCTGGATTCG+AGG 0.556245 2.4:+76007755 None:intergenic
GCAGGATCCGCTACCTGTAA+GGG 0.557738 2.4:+76007457 None:intergenic
ACATGCTGCAGAGGGAGCAT+GGG 0.557940 2.4:-76005023 MS.gene072040:CDS
TAATCAATAAAACCCGATTG+AGG 0.563006 2.4:+76007001 None:intergenic
CAAACACCCTCTTGAAGTCA+TGG 0.563636 2.4:+76005101 None:intergenic
AACCCCATAATTCTATCCCC+CGG 0.565369 2.4:+76007130 None:intergenic
ACATTCACACCCCAACACTT+AGG 0.565506 2.4:+76007208 None:intergenic
GAGAGGGATACTTCTTACTC+AGG 0.566579 2.4:-76005852 MS.gene072040:CDS
TAGTGGGCTAATTGCAGCCA+AGG 0.567530 2.4:-76006831 MS.gene072040:intron
GAACAAAACCAAGGAAGAGA+GGG 0.569137 2.4:-76005868 MS.gene072040:CDS
AGCTGTGTTATTGTGTGACA+TGG 0.570438 2.4:-76006861 MS.gene072040:CDS
TTCCATGAGCTGAAGGGGAA+CGG 0.572001 2.4:+76007714 None:intergenic
CAAAAGCTTCAACCCGTACC+CGG 0.575415 2.4:+76004944 None:intergenic
TTAACGAATAAATACTCTGA+AGG 0.575868 2.4:-76007325 MS.gene072040:CDS
TCCGGAGGGAATACTAGTCA+TGG 0.579396 2.4:-76007097 MS.gene072040:CDS
TGATCAACCCTTACAGGTAG+CGG 0.579575 2.4:-76007464 MS.gene072040:CDS
CATGAGCTGAAGGGGAACGG+TGG 0.580804 2.4:+76007717 None:intergenic
TTTCGTGACTCGAGATCAAG+TGG 0.581695 2.4:+76007508 None:intergenic
TCTCTTGGTTGTGATTGTAG+AGG 0.582378 2.4:+76007561 None:intergenic
TCCATGACTAGTATTCCCTC+CGG 0.583312 2.4:+76007096 None:intergenic
TACTGGATTGCTGTCGCCGG+GGG 0.583385 2.4:-76007146 MS.gene072040:CDS
GTATAAGGCATACATGCAGC+AGG 0.583723 2.4:-76005699 MS.gene072040:CDS
GAGGTCCGCCTTGCAATGAT+GGG 0.585958 2.4:+76005777 None:intergenic
GGAACAAAACCAAGGAAGAG+AGG 0.587356 2.4:-76005869 MS.gene072040:CDS
AAAGCCGCGGTTCGATCGTG+GGG 0.587387 2.4:-76007487 MS.gene072040:CDS
ATGGAGTCGTCGGGAATCGG+TGG 0.587439 2.4:+76007787 None:intergenic
TCGGGAATCGGTGGACGGCG+CGG 0.592318 2.4:+76007796 None:intergenic
ACCCTCTTGAAGTCATGGCG+GGG 0.594967 2.4:+76005106 None:intergenic
AGACATGTTGCAGATAAATG+TGG 0.598660 2.4:-76006884 MS.gene072040:CDS
GTTGAGAAGAAAATGCCGCT+TGG 0.600657 2.4:-76005642 MS.gene072040:CDS
TGAGCTGAAGGGGAACGGTG+GGG 0.601633 2.4:+76007719 None:intergenic
AGTCGTCGGGAATCGGTGGA+CGG 0.602247 2.4:+76007791 None:intergenic
CCCTCTTGAAGTCATGGCGG+GGG 0.602417 2.4:+76005107 None:intergenic
TTTGGGATTTAAGGCCCCTG+GGG 0.603999 2.4:-76005589 MS.gene072040:CDS
GAAGCTGGATTCGAGGTGGA+GGG 0.604018 2.4:+76007762 None:intergenic
TGTGGTTCCATGAGCTGAAG+GGG 0.604077 2.4:+76007709 None:intergenic
AAATTGCAAACATGCTGCAG+AGG 0.606043 2.4:-76005032 MS.gene072040:CDS
ATTCCTGGAGGAGTAAGGAT+AGG 0.606404 2.4:-76005232 MS.gene072040:intron
TTGTGGTTCCATGAGCTGAA+GGG 0.608128 2.4:+76007708 None:intergenic
AATTGCAAACATGCTGCAGA+GGG 0.608187 2.4:-76005031 MS.gene072040:CDS
GGAATCGGTGGACGGCGCGG+CGG 0.608759 2.4:+76007799 None:intergenic
AAGTGGACGATCACCTCGAT+CGG 0.612859 2.4:+76007525 None:intergenic
GTGACATGGCTCAGATTAGT+GGG 0.613437 2.4:-76006847 MS.gene072040:CDS
ATTGCAGAAGACTATTTCGA+AGG 0.614744 2.4:-76004998 MS.gene072040:CDS
TATAATACCTGTCAACCCCA+GGG 0.618108 2.4:+76005574 None:intergenic
GCAGCCATATTCCTGTACTT+CGG 0.621993 2.4:-76007185 MS.gene072040:CDS
GCGGCAATATGGTTATTATG+AGG 0.625894 2.4:+76005758 None:intergenic
CGCGGAAGCTGGATTCGAGG+TGG 0.631260 2.4:+76007758 None:intergenic
AAAATGCCGCTTGGTAACTG+GGG 0.632870 2.4:-76005633 MS.gene072040:CDS
ATCGGAAGGGAACAAAACCA+AGG 0.639567 2.4:-76005877 MS.gene072040:CDS
CCTGGTGCACGTTACTATGG+TGG 0.642444 2.4:-76007298 MS.gene072040:CDS
AGAGGGATACTTCTTACTCA+GGG 0.644868 2.4:-76005851 MS.gene072040:CDS
AGTCTTCGAGGTCCAAGGGG+TGG 0.648124 2.4:-76005911 MS.gene072040:CDS
AGGGCTGTGATGGAAGCACT+TGG 0.648724 2.4:-76007355 MS.gene072040:CDS
GAATGGGAAGAAAGTTTCTG+GGG 0.652417 2.4:-76007062 MS.gene072040:CDS
ATACTGGATTGCTGTCGCCG+GGG 0.657042 2.4:-76007147 MS.gene072040:CDS
TGACTAGTATTCCCTCCGGA+AGG 0.658793 2.4:+76007100 None:intergenic
GGTTGGATACTCCTTCCGGA+GGG 0.661578 2.4:-76007111 MS.gene072040:CDS
GTATGCCTTATACTCAGGAG+TGG 0.664075 2.4:+76005709 None:intergenic
TTAGCATAATCCCATTCTCG+AGG 0.664741 2.4:+76006911 None:intergenic
GGGTTGGATACTCCTTCCGG+AGG 0.665412 2.4:-76007112 MS.gene072040:CDS
TATGTTCAAATGTCAAAACC+CGG 0.667596 2.4:+76004904 None:intergenic
ATCACCCCACGATCGAACCG+CGG 0.669715 2.4:+76007483 None:intergenic
AAATGCCGCTTGGTAACTGG+GGG 0.673920 2.4:-76005632 MS.gene072040:CDS
ACACCCTCTTGAAGTCATGG+CGG 0.681018 2.4:+76005104 None:intergenic
AAGAGTCTTCGAGGTCCAAG+GGG 0.697636 2.4:-76005914 MS.gene072040:CDS
GGACAGGGTTTGATGGATCG+CGG 0.699775 2.4:+76007740 None:intergenic
TCTCGAGTCACGAAAAGCCG+CGG 0.714087 2.4:-76007500 MS.gene072040:CDS
AATGGAATTATAATTCCTGG+AGG 0.715263 2.4:-76005244 MS.gene072040:CDS
ATAATACCTGTCAACCCCAG+GGG 0.725327 2.4:+76005575 None:intergenic
GCTTCCGTAGAATCCGATCG+AGG 0.738124 2.4:-76007538 MS.gene072040:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGTTAACGAAATTATAAAA+TGG + chr2.4:76006316-76006335 None:intergenic 15.0%
!! TAAAACATAAAAGATTAAAC+AGG + chr2.4:76006410-76006429 None:intergenic 15.0%
!!! ATCGAGAATTTTTTAAATTA+TGG - chr2.4:76006288-76006307 MS.gene072040:intron 15.0%
!!! ATCGATAAAATTCAATTTTA+GGG + chr2.4:76006201-76006220 None:intergenic 15.0%
!!! TCGAGAATTTTTTAAATTAT+GGG - chr2.4:76006289-76006308 MS.gene072040:intron 15.0%
!!! TTGAATAAAATTGCTATTTT+TGG - chr2.4:76007497-76007516 MS.gene072040:CDS 15.0%
!! TTAAATCCCAAAGTAATAAA+TGG + chr2.4:76007171-76007190 None:intergenic 20.0%
!! TTATAAGATTAATCCTCAAT+CGG - chr2.4:76005754-76005773 MS.gene072040:CDS 20.0%
!! TTATTAGATATTTGTGCAAA+GGG + chr2.4:76006710-76006729 None:intergenic 20.0%
!! TTTATTAGATATTTGTGCAA+AGG + chr2.4:76006711-76006730 None:intergenic 20.0%
!!! ATTTATTACTTTGGGATTTA+AGG - chr2.4:76007170-76007189 MS.gene072040:CDS 20.0%
!!! CAACAATACCTTATTTTTTT+TGG - chr2.4:76007426-76007445 MS.gene072040:CDS 20.0%
!!! GATCGATAAAATTCAATTTT+AGG + chr2.4:76006202-76006221 None:intergenic 20.0%
!!! TTAACTTTGAAAGTTTAGTA+GGG - chr2.4:76006015-76006034 MS.gene072040:intron 20.0%
! AATTTCAAGGACTAAATTGA+CGG + chr2.4:76006249-76006268 None:intergenic 25.0%
! ACAACATCACAATAATCAAA+AGG + chr2.4:76006818-76006837 None:intergenic 25.0%
! ACACTATTAACCACAATAAA+GGG + chr2.4:76006480-76006499 None:intergenic 25.0%
! AGACAACCATTTATTACTTT+GGG - chr2.4:76007162-76007181 MS.gene072040:CDS 25.0%
! ATTATGATAAGCTTGAAGAA+AGG - chr2.4:76005786-76005805 MS.gene072040:CDS 25.0%
! CAAATTATGCTGTAATCATA+TGG - chr2.4:76007351-76007370 MS.gene072040:CDS 25.0%
! CAACATCACAATAATCAAAA+GGG + chr2.4:76006817-76006836 None:intergenic 25.0%
! TACAATTTCCAGAACTATAT+TGG - chr2.4:76006359-76006378 MS.gene072040:intron 25.0%
! TATAAGATTAATCCTCAATC+GGG - chr2.4:76005755-76005774 MS.gene072040:CDS 25.0%
! TTAACGAATAAATACTCTGA+AGG - chr2.4:76005443-76005462 MS.gene072040:intron 25.0%
! TTATGATAAGCTTGAAGAAA+GGG - chr2.4:76005787-76005806 MS.gene072040:CDS 25.0%
! TTTATTGTGGTTAATAGTGT+GGG - chr2.4:76006480-76006499 MS.gene072040:intron 25.0%
!! ATAAGGCATTAAAGTCAATA+TGG + chr2.4:76006618-76006637 None:intergenic 25.0%
!! ATTTTTATGTTGTATCACCA+AGG - chr2.4:76007636-76007655 MS.gene072040:CDS 25.0%
!! CAGAGTATTTATTCGTTAAA+TGG + chr2.4:76005442-76005461 None:intergenic 25.0%
!! CATTTTCCTTACAATATTTG+TGG - chr2.4:76005967-76005986 MS.gene072040:CDS 25.0%
!! GATTAACTTGAAAGTGTATA+AGG + chr2.4:76006635-76006654 None:intergenic 25.0%
!! GTTAACTTTGAAAGTTTAGT+AGG - chr2.4:76006014-76006033 MS.gene072040:intron 25.0%
!! TAGATTTCAGTTTGACTTAA+TGG - chr2.4:76006448-76006467 MS.gene072040:intron 25.0%
!!! ATATAGTTCTGGAAATTGTA+TGG + chr2.4:76006359-76006378 None:intergenic 25.0%
!!! ATTTTCTGTAATTTCTGGAT+GGG - chr2.4:76006665-76006684 MS.gene072040:intron 25.0%
!!! CGTTCTTATGTTTTTGTATA+CGG - chr2.4:76007400-76007419 MS.gene072040:CDS 25.0%
!!! GGTATAATTTTTTATCGGAA+GGG - chr2.4:76006878-76006897 MS.gene072040:CDS 25.0%
!!! TGGTATAATTTTTTATCGGA+AGG - chr2.4:76006877-76006896 MS.gene072040:CDS 25.0%
!!! TGTTGTTTTCTTTAACAGTA+TGG - chr2.4:76006763-76006782 MS.gene072040:intron 25.0%
!!! TTCTGAGAATTTTGTTTGTA+GGG - chr2.4:76005394-76005413 MS.gene072040:intron 25.0%
!!! TTGTTTTAATGCAATAGCAA+GGG + chr2.4:76007035-76007054 None:intergenic 25.0%
AATGGAATTATAATTCCTGG+AGG - chr2.4:76007524-76007543 MS.gene072040:CDS 30.0%
AGTCCTTGAAATTGTTCTTT+AGG - chr2.4:76006256-76006275 MS.gene072040:intron 30.0%
ATCTATATCAGCATGTGTAT+TGG + chr2.4:76006433-76006452 None:intergenic 30.0%
ATGAATCACCAATATAGTTC+TGG + chr2.4:76006370-76006389 None:intergenic 30.0%
ATGGATATTATACTCCGAAT+GGG - chr2.4:76005690-76005709 MS.gene072040:CDS 30.0%
ATTACAGAAAATGACCAACT+AGG + chr2.4:76006657-76006676 None:intergenic 30.0%
CACACTATTAACCACAATAA+AGG + chr2.4:76006481-76006500 None:intergenic 30.0%
CAGACAACCATTTATTACTT+TGG - chr2.4:76007161-76007180 MS.gene072040:CDS 30.0%
CTAACTCCACAAATATTGTA+AGG + chr2.4:76005976-76005995 None:intergenic 30.0%
CTAAGATACTTATTTGTGGT+GGG - chr2.4:76005825-76005844 MS.gene072040:CDS 30.0%
CTTTATTGTGGTTAATAGTG+TGG - chr2.4:76006479-76006498 MS.gene072040:intron 30.0%
GACAATGGAATTATAATTCC+TGG - chr2.4:76007521-76007540 MS.gene072040:CDS 30.0%
GCAATCAATAACAACAATGA+AGG + chr2.4:76006055-76006074 None:intergenic 30.0%
GTCCTTGAAATTGTTCTTTA+GGG - chr2.4:76006257-76006276 MS.gene072040:intron 30.0%
GTTGAAGAATTTCGTATTCT+AGG - chr2.4:76005146-76005165 MS.gene072040:intron 30.0%
TAAAAAATTATACCACCCCT+TGG + chr2.4:76006872-76006891 None:intergenic 30.0%
TAAAACTAGTAGACCACTAT+GGG + chr2.4:76006561-76006580 None:intergenic 30.0%
TAAGAACGAAATGTCACTAA+TGG + chr2.4:76007388-76007407 None:intergenic 30.0%
TAATCAATAAAACCCGATTG+AGG + chr2.4:76005770-76005789 None:intergenic 30.0%
TAATCTTGATCCTAAGTGTT+GGG - chr2.4:76005550-76005569 MS.gene072040:intron 30.0%
TCTATAATCTCGTATATAGC+AGG + chr2.4:76005332-76005351 None:intergenic 30.0%
TGAGAAATTGAGAGATAGAT+TGG + chr2.4:76004934-76004953 None:intergenic 30.0%
TGCTATTGCATTAAAACAAG+TGG - chr2.4:76007036-76007055 MS.gene072040:CDS 30.0%
TTAAAACTAGTAGACCACTA+TGG + chr2.4:76006562-76006581 None:intergenic 30.0%
TTAATCTTGATCCTAAGTGT+TGG - chr2.4:76005549-76005568 MS.gene072040:intron 30.0%
TTATCGATCACATTTGTAGT+AGG - chr2.4:76006213-76006232 MS.gene072040:intron 30.0%
! ATAGATGAACTTTGTTGCTT+AGG + chr2.4:76006153-76006172 None:intergenic 30.0%
! TCTTTAACAGTATGGTTTTC+TGG - chr2.4:76006771-76006790 MS.gene072040:intron 30.0%
!! ACTTTCAAGTTAATCCTAGT+TGG - chr2.4:76006640-76006659 MS.gene072040:intron 30.0%
!! AGAAAAAGCGTCAATTCAAA+GGG - chr2.4:76005357-76005376 MS.gene072040:intron 30.0%
!! CATTTTCTGTAATTTCTGGA+TGG - chr2.4:76006664-76006683 MS.gene072040:intron 30.0%
!! CTTCTGAGAATTTTGTTTGT+AGG - chr2.4:76005393-76005412 MS.gene072040:intron 30.0%
!! TGGTCATTTTCTGTAATTTC+TGG - chr2.4:76006660-76006679 MS.gene072040:intron 30.0%
!!! ATTGCTATTTTTGGTGACAA+TGG - chr2.4:76007506-76007525 MS.gene072040:CDS 30.0%
!!! CTTGTTTTAATGCAATAGCA+AGG + chr2.4:76007036-76007055 None:intergenic 30.0%
!!! GGGGTGGTATAATTTTTTAT+CGG - chr2.4:76006873-76006892 MS.gene072040:CDS 30.0%
AAGGAAAATGTTTCACACCT+TGG + chr2.4:76005957-76005976 None:intergenic 35.0%
AGACATGTTGCAGATAAATG+TGG - chr2.4:76005884-76005903 MS.gene072040:CDS 35.0%
ATTGCAGAAGACTATTTCGA+AGG - chr2.4:76007770-76007789 MS.gene072040:CDS 35.0%
ATTTGTGCAAAGGGCAATAA+TGG + chr2.4:76006701-76006720 None:intergenic 35.0%
CATGGATATTATACTCCGAA+TGG - chr2.4:76005689-76005708 MS.gene072040:CDS 35.0%
CCACAAACAGAGAAAGAAAA+CGG - chr2.4:76005077-76005096 MS.gene072040:CDS 35.0%
CCACCACAAATAAGTATCTT+AGG + chr2.4:76005827-76005846 None:intergenic 35.0%
CCTAAGATACTTATTTGTGG+TGG - chr2.4:76005824-76005843 MS.gene072040:CDS 35.0%
CCTGCACACCAAAAAAAATA+AGG + chr2.4:76007437-76007456 None:intergenic 35.0%
CGTCCTAAGATACTTATTTG+TGG - chr2.4:76005821-76005840 MS.gene072040:CDS 35.0%
GTCCCTAAAGAACAATTTCA+AGG + chr2.4:76006262-76006281 None:intergenic 35.0%
TATGTCAACTAGACTCGTTT+AGG - chr2.4:76007271-76007290 MS.gene072040:CDS 35.0%
TCTATCATCTTCATCGTTGT+TGG + chr2.4:76005123-76005142 None:intergenic 35.0%
TGAGAGATAGATTGGATTGA+TGG + chr2.4:76004926-76004945 None:intergenic 35.0%
TGTAATCATATGGTTCAAGC+TGG - chr2.4:76007361-76007380 MS.gene072040:CDS 35.0%
TTATAATTCCTGGAGGAGTA+AGG - chr2.4:76007531-76007550 MS.gene072040:CDS 35.0%
! AATCTTGATCCTAAGTGTTG+GGG - chr2.4:76005551-76005570 MS.gene072040:intron 35.0%
! ACTAAATTGACGGATCGAAA+AGG + chr2.4:76006239-76006258 None:intergenic 35.0%
! ATGAACTTTGTTGCTTAGGA+TGG + chr2.4:76006149-76006168 None:intergenic 35.0%
! TGCAGGTAAATTTTACGAGA+AGG - chr2.4:76007451-76007470 MS.gene072040:CDS 35.0%
! TTTTAATGCAATAGCAAGGG+CGG + chr2.4:76007032-76007051 None:intergenic 35.0%
!! GAGAAAAAGCGTCAATTCAA+AGG - chr2.4:76005356-76005375 MS.gene072040:intron 35.0%
!! GCTAATTTTGCTGTGTATAC+TGG - chr2.4:76005605-76005624 MS.gene072040:CDS 35.0%
!!! CCTTATTTTTTTTGGTGTGC+AGG - chr2.4:76007434-76007453 MS.gene072040:CDS 35.0%
AAATTGCAAACATGCTGCAG+AGG - chr2.4:76007736-76007755 MS.gene072040:CDS 40.0%
AAGTTTAGTAGGGCTTGTGT+CGG - chr2.4:76006025-76006044 MS.gene072040:intron 40.0%
AATTGCAAACATGCTGCAGA+GGG - chr2.4:76007737-76007756 MS.gene072040:CDS 40.0%
AGAGACTCGATATCACTATC+TGG - chr2.4:76006533-76006552 MS.gene072040:intron 40.0%
AGAGGGATACTTCTTACTCA+GGG - chr2.4:76006917-76006936 MS.gene072040:CDS 40.0%
AGCAAAATTAGCCGAAGTAC+AGG + chr2.4:76005597-76005616 None:intergenic 40.0%
ATATAATACCTGTCAACCCC+AGG + chr2.4:76007198-76007217 None:intergenic 40.0%
ATCAGCCATCGTCTCAAAAT+CGG + chr2.4:76007697-76007716 None:intergenic 40.0%
ATTGCACTTAGTCAACGAGT+TGG - chr2.4:76006070-76006089 MS.gene072040:intron 40.0%
CCAGAAACTTTCTTCCCATT+CGG + chr2.4:76005707-76005726 None:intergenic 40.0%
CGAATGGGAAGAAAGTTTCT+GGG - chr2.4:76005705-76005724 MS.gene072040:CDS 40.0%
GAACAAAACCAAGGAAGAGA+GGG - chr2.4:76006900-76006919 MS.gene072040:CDS 40.0%
GAATGGGAAGAAAGTTTCTG+GGG - chr2.4:76005706-76005725 MS.gene072040:CDS 40.0%
GAGTTCTTATCCTCGAGAAT+GGG - chr2.4:76005847-76005866 MS.gene072040:CDS 40.0%
GCGGCAATATGGTTATTATG+AGG + chr2.4:76007013-76007032 None:intergenic 40.0%
GGTTGTGATTGTAGAGGATT+CGG + chr2.4:76005204-76005223 None:intergenic 40.0%
TATAATACCTGTCAACCCCA+GGG + chr2.4:76007197-76007216 None:intergenic 40.0%
TCTCTTGGTTGTGATTGTAG+AGG + chr2.4:76005210-76005229 None:intergenic 40.0%
TGCATGTATGCCTTATACTC+AGG + chr2.4:76007067-76007086 None:intergenic 40.0%
TTAGCATAATCCCATTCTCG+AGG + chr2.4:76005860-76005879 None:intergenic 40.0%
TTAGCCGAAGTACAGGAATA+TGG + chr2.4:76005590-76005609 None:intergenic 40.0%
TTGCACTTAGTCAACGAGTT+GGG - chr2.4:76006071-76006090 MS.gene072040:intron 40.0%
! AAATACTCTGAAGGAATGCC+TGG - chr2.4:76005452-76005471 MS.gene072040:intron 40.0%
! AGCTGTGTTATTGTGTGACA+TGG - chr2.4:76005907-76005926 MS.gene072040:CDS 40.0%
! ATTTTACGAGAAGGTCTGTG+AGG - chr2.4:76007460-76007479 MS.gene072040:CDS 40.0%
! CCGTTTTCTTTCTCTGTTTG+TGG + chr2.4:76005080-76005099 None:intergenic 40.0%
! CTTTGTTGCTTAGGATGGAA+TGG + chr2.4:76006144-76006163 None:intergenic 40.0%
! TCAACGAGTTGGGCAATTAT+AGG - chr2.4:76006081-76006100 MS.gene072040:intron 40.0%
! TTCTGTAATTTCTGGATGGG+TGG - chr2.4:76006668-76006687 MS.gene072040:intron 40.0%
!! CTGCACTTTGCATTGACTTT+GGG - chr2.4:76007305-76007324 MS.gene072040:CDS 40.0%
!! GAAGGTACTTGAGAGCAATA+GGG - chr2.4:76007788-76007807 MS.gene072040:CDS 40.0%
!! TCTGCACTTTGCATTGACTT+TGG - chr2.4:76007304-76007323 MS.gene072040:CDS 40.0%
!! TTTTGTTTGTAGGGCTGTGA+TGG - chr2.4:76005403-76005422 MS.gene072040:intron 40.0%
AACCCCATAATTCTATCCCC+CGG + chr2.4:76005641-76005660 None:intergenic 45.0%
ACAACTCACAAGAGTCTTCG+AGG - chr2.4:76006845-76006864 MS.gene072040:CDS 45.0%
ACATTCACACCCCAACACTT+AGG + chr2.4:76005563-76005582 None:intergenic 45.0%
ATAATACCTGTCAACCCCAG+GGG + chr2.4:76007196-76007215 None:intergenic 45.0%
ATAGGGACATTCTTGAGCTC+CGG - chr2.4:76007805-76007824 MS.gene072040:CDS 45.0%
ATCACCTCGATCGGATTCTA+CGG + chr2.4:76005237-76005256 None:intergenic 45.0%
ATCGGAAGGGAACAAAACCA+AGG - chr2.4:76006891-76006910 MS.gene072040:CDS 45.0%
ATGGCAGAGTCCCTTTATTG+TGG - chr2.4:76006467-76006486 MS.gene072040:intron 45.0%
ATTCCTGGAGGAGTAAGGAT+AGG - chr2.4:76007536-76007555 MS.gene072040:CDS 45.0%
CAAACACCCTCTTGAAGTCA+TGG + chr2.4:76007670-76007689 None:intergenic 45.0%
CCGAATGGGAAGAAAGTTTC+TGG - chr2.4:76005704-76005723 MS.gene072040:CDS 45.0%
GAGAGGGATACTTCTTACTC+AGG - chr2.4:76006916-76006935 MS.gene072040:CDS 45.0%
GCAGCCATATTCCTGTACTT+CGG - chr2.4:76005583-76005602 MS.gene072040:CDS 45.0%
GGAACAAAACCAAGGAAGAG+AGG - chr2.4:76006899-76006918 MS.gene072040:CDS 45.0%
GGAGTTCTTATCCTCGAGAA+TGG - chr2.4:76005846-76005865 MS.gene072040:CDS 45.0%
GTATAAGGCATACATGCAGC+AGG - chr2.4:76007069-76007088 MS.gene072040:CDS 45.0%
GTATGCCTTATACTCAGGAG+TGG + chr2.4:76007062-76007081 None:intergenic 45.0%
GTGACATGGCTCAGATTAGT+GGG - chr2.4:76005921-76005940 MS.gene072040:CDS 45.0%
GTGGTTAATAGTGTGGGTCA+TGG - chr2.4:76006486-76006505 MS.gene072040:intron 45.0%
GTTGAGAAGAAAATGCCGCT+TGG - chr2.4:76007126-76007145 MS.gene072040:CDS 45.0%
TCACTATCTGGATCCCATAG+TGG - chr2.4:76006545-76006564 MS.gene072040:intron 45.0%
TCCATGACTAGTATTCCCTC+CGG + chr2.4:76005675-76005694 None:intergenic 45.0%
TGATCAACCCTTACAGGTAG+CGG - chr2.4:76005304-76005323 MS.gene072040:CDS 45.0%
TGTGACATGGCTCAGATTAG+TGG - chr2.4:76005920-76005939 MS.gene072040:CDS 45.0%
TTACCTATCCTTACTCCTCC+AGG + chr2.4:76007542-76007561 None:intergenic 45.0%
TTGTGGTTCCATGAGCTGAA+GGG + chr2.4:76005063-76005082 None:intergenic 45.0%
TTTCGTGACTCGAGATCAAG+TGG + chr2.4:76005263-76005282 None:intergenic 45.0%
TTTGTGGTTCCATGAGCTGA+AGG + chr2.4:76005064-76005083 None:intergenic 45.0%
! AAAATGCCGCTTGGTAACTG+GGG - chr2.4:76007135-76007154 MS.gene072040:CDS 45.0%
! AGAAAATGCCGCTTGGTAAC+TGG - chr2.4:76007133-76007152 MS.gene072040:CDS 45.0%
! GAAAATGCCGCTTGGTAACT+GGG - chr2.4:76007134-76007153 MS.gene072040:CDS 45.0%
! GTTTTCCCATCATTGCAAGG+CGG - chr2.4:76006986-76007005 MS.gene072040:CDS 45.0%
! TGCAACACAGTTTGCTTTGC+CGG - chr2.4:76007845-76007864 MS.gene072040:CDS 45.0%
!! AGAAGTATCCCTCTCTTCCT+TGG + chr2.4:76006911-76006930 None:intergenic 45.0%
!! CATGACTTCAAGAGGGTGTT+TGG - chr2.4:76007668-76007687 MS.gene072040:CDS 45.0%
!! CGAAGGTACTTGAGAGCAAT+AGG - chr2.4:76007787-76007806 MS.gene072040:CDS 45.0%
!! GCTGTTTTCCCATCATTGCA+AGG - chr2.4:76006983-76007002 MS.gene072040:CDS 45.0%
!! TATGGTTTTCTGGTCCTTGC+AGG - chr2.4:76006781-76006800 MS.gene072040:intron 45.0%
AAGAGTCTTCGAGGTCCAAG+GGG - chr2.4:76006854-76006873 MS.gene072040:CDS 50.0%
AAGTGGACGATCACCTCGAT+CGG + chr2.4:76005246-76005265 None:intergenic 50.0%
ACAAGAGTCTTCGAGGTCCA+AGG - chr2.4:76006852-76006871 MS.gene072040:CDS 50.0%
ACACCCTCTTGAAGTCATGG+CGG + chr2.4:76007667-76007686 None:intergenic 50.0%
ACATTCTTGAGCTCCGGGTA+CGG - chr2.4:76007811-76007830 MS.gene072040:CDS 50.0%
AGTGGCCACTCCTGAGTATA+AGG - chr2.4:76007054-76007073 MS.gene072040:CDS 50.0%
ATGCCTGGTGCACGTTACTA+TGG - chr2.4:76005467-76005486 MS.gene072040:intron 50.0%
ATGGGGTTGGATACTCCTTC+CGG - chr2.4:76005653-76005672 MS.gene072040:CDS 50.0%
CAAAAGCTTCAACCCGTACC+CGG + chr2.4:76007827-76007846 None:intergenic 50.0%
CAAGAGTCTTCGAGGTCCAA+GGG - chr2.4:76006853-76006872 MS.gene072040:CDS 50.0%
CAATAGCAAGGGCGGCAATA+TGG + chr2.4:76007024-76007043 None:intergenic 50.0%
GGATTCTACGGAAGCTCTCT+TGG + chr2.4:76005225-76005244 None:intergenic 50.0%
GGGGGATAGAATTATGGGGT+TGG - chr2.4:76005640-76005659 MS.gene072040:CDS 50.0%
GTATACTGGATTGCTGTCGC+CGG - chr2.4:76005619-76005638 MS.gene072040:CDS 50.0%
TAGGGACATTCTTGAGCTCC+GGG - chr2.4:76007806-76007825 MS.gene072040:CDS 50.0%
TATACTGGATTGCTGTCGCC+GGG - chr2.4:76005620-76005639 MS.gene072040:CDS 50.0%
TCCGGAGGGAATACTAGTCA+TGG - chr2.4:76005671-76005690 MS.gene072040:CDS 50.0%
TCGCCGGGGGATAGAATTAT+GGG - chr2.4:76005635-76005654 MS.gene072040:CDS 50.0%
TGACTAGTATTCCCTCCGGA+AGG + chr2.4:76005671-76005690 None:intergenic 50.0%
TGTGGTTCCATGAGCTGAAG+GGG + chr2.4:76005062-76005081 None:intergenic 50.0%
TTCCATGAGCTGAAGGGGAA+CGG + chr2.4:76005057-76005076 None:intergenic 50.0%
! AAATGCCGCTTGGTAACTGG+GGG - chr2.4:76007136-76007155 MS.gene072040:CDS 50.0%
! GCAACACAGTTTGCTTTGCC+GGG - chr2.4:76007846-76007865 MS.gene072040:CDS 50.0%
! TTTGGGATTTAAGGCCCCTG+GGG - chr2.4:76007179-76007198 MS.gene072040:CDS 50.0%
!! ACTTTGGGATTTAAGGCCCC+TGG - chr2.4:76007177-76007196 MS.gene072040:CDS 50.0%
!! CTTTGGGATTTAAGGCCCCT+GGG - chr2.4:76007178-76007197 MS.gene072040:CDS 50.0%
!! GACTTCAAGAGGGTGTTTGG+AGG - chr2.4:76007671-76007690 MS.gene072040:CDS 50.0%
!! TAGTGGGCTAATTGCAGCCA+AGG - chr2.4:76005937-76005956 MS.gene072040:CDS 50.0%
AAAAGCCGCGGTTCGATCGT+GGG - chr2.4:76005280-76005299 MS.gene072040:CDS 55.0%
AACATGCTGCAGAGGGAGCA+TGG - chr2.4:76007744-76007763 MS.gene072040:CDS 55.0%
ACCCTCTTGAAGTCATGGCG+GGG + chr2.4:76007665-76007684 None:intergenic 55.0%
AGCAGGATCCGCTACCTGTA+AGG + chr2.4:76005315-76005334 None:intergenic 55.0%
AGGGTTCACACACTCCTGCA+AGG + chr2.4:76006798-76006817 None:intergenic 55.0%
ATACTGGATTGCTGTCGCCG+GGG - chr2.4:76005621-76005640 MS.gene072040:CDS 55.0%
ATGAGCTGAAGGGGAACGGT+GGG + chr2.4:76005053-76005072 None:intergenic 55.0%
CACCCTCTTGAAGTCATGGC+GGG + chr2.4:76007666-76007685 None:intergenic 55.0%
CATTCTTGAGCTCCGGGTAC+GGG - chr2.4:76007812-76007831 MS.gene072040:CDS 55.0%
CCACCATAGTAACGTGCACC+AGG + chr2.4:76005473-76005492 None:intergenic 55.0%
CCTGGTGCACGTTACTATGG+TGG - chr2.4:76005470-76005489 MS.gene072040:intron 55.0%
CGCCGGGGGATAGAATTATG+GGG - chr2.4:76005636-76005655 MS.gene072040:CDS 55.0%
CTGTACCCCCAGTTACCAAG+CGG + chr2.4:76007144-76007163 None:intergenic 55.0%
GAAGCTGGATTCGAGGTGGA+GGG + chr2.4:76005009-76005028 None:intergenic 55.0%
GAGGTCCGCCTTGCAATGAT+GGG + chr2.4:76006994-76007013 None:intergenic 55.0%
GCAGGATCCGCTACCTGTAA+GGG + chr2.4:76005314-76005333 None:intergenic 55.0%
GCTTCCGTAGAATCCGATCG+AGG - chr2.4:76005230-76005249 MS.gene072040:intron 55.0%
GGTTGGATACTCCTTCCGGA+GGG - chr2.4:76005657-76005676 MS.gene072040:CDS 55.0%
GTCGCCGGGGGATAGAATTA+TGG - chr2.4:76005634-76005653 MS.gene072040:CDS 55.0%
GTGGGGTGATCAACCCTTAC+AGG - chr2.4:76005298-76005317 MS.gene072040:CDS 55.0%
TCTCGAGTCACGAAAAGCCG+CGG - chr2.4:76005268-76005287 MS.gene072040:CDS 55.0%
TGAGGTCCGCCTTGCAATGA+TGG + chr2.4:76006995-76007014 None:intergenic 55.0%
! ACATGCTGCAGAGGGAGCAT+GGG - chr2.4:76007745-76007764 MS.gene072040:CDS 55.0%
! GGACAGGGTTTGATGGATCG+CGG + chr2.4:76005031-76005050 None:intergenic 55.0%
! GTTTGATGGATCGCGGAAGC+TGG + chr2.4:76005024-76005043 None:intergenic 55.0%
!! AGGGCTGTGATGGAAGCACT+TGG - chr2.4:76005413-76005432 MS.gene072040:intron 55.0%
!!! GGAGGCCGATTTTGAGACGA+TGG - chr2.4:76007689-76007708 MS.gene072040:CDS 55.0%
AAAGCCGCGGTTCGATCGTG+GGG - chr2.4:76005281-76005300 MS.gene072040:CDS 60.0%
ACCCCCGCCATGACTTCAAG+AGG - chr2.4:76007660-76007679 MS.gene072040:CDS 60.0%
ACGGTGGGGACAGGGTTTGA+TGG + chr2.4:76005038-76005057 None:intergenic 60.0%
AGTCGTCGGGAATCGGTGGA+CGG + chr2.4:76004980-76004999 None:intergenic 60.0%
AGTCTTCGAGGTCCAAGGGG+TGG - chr2.4:76006857-76006876 MS.gene072040:CDS 60.0%
ATCACCCCACGATCGAACCG+CGG + chr2.4:76005288-76005307 None:intergenic 60.0%
ATGGAGTCGTCGGGAATCGG+TGG + chr2.4:76004984-76005003 None:intergenic 60.0%
CACCGTTCCCCTTCAGCTCA+TGG - chr2.4:76005052-76005071 MS.gene072040:CDS 60.0%
CATGAGCTGAAGGGGAACGG+TGG + chr2.4:76005054-76005073 None:intergenic 60.0%
CCCCCGCCATGACTTCAAGA+GGG - chr2.4:76007661-76007680 MS.gene072040:CDS 60.0%
CCCTCTTGAAGTCATGGCGG+GGG + chr2.4:76007664-76007683 None:intergenic 60.0%
GAAAAGCCGCGGTTCGATCG+TGG - chr2.4:76005279-76005298 MS.gene072040:CDS 60.0%
GATCGCGGAAGCTGGATTCG+AGG + chr2.4:76005016-76005035 None:intergenic 60.0%
GCGATGGAGTCGTCGGGAAT+CGG + chr2.4:76004987-76005006 None:intergenic 60.0%
GCTTTGCTGCGAGCGTGCTT+TGG - chr2.4:76005520-76005539 MS.gene072040:intron 60.0%
GGAAGCTGGATTCGAGGTGG+AGG + chr2.4:76005010-76005029 None:intergenic 60.0%
GGGTTGGATACTCCTTCCGG+AGG - chr2.4:76005656-76005675 MS.gene072040:CDS 60.0%
TACTGGATTGCTGTCGCCGG+GGG - chr2.4:76005622-76005641 MS.gene072040:CDS 60.0%
TGAGCTGAAGGGGAACGGTG+GGG + chr2.4:76005052-76005071 None:intergenic 60.0%
TTAAGGCCCCTGGGGTTGAC+AGG - chr2.4:76007187-76007206 MS.gene072040:CDS 60.0%
!! AAGTCATGGCGGGGGTACCT+TGG + chr2.4:76007656-76007675 None:intergenic 60.0%
CGCGGAAGCTGGATTCGAGG+TGG + chr2.4:76005013-76005032 None:intergenic 65.0%
GAAGGGGAACGGTGGGGACA+GGG + chr2.4:76005046-76005065 None:intergenic 65.0%
GGATTCGAGGTGGAGGGCGA+TGG + chr2.4:76005003-76005022 None:intergenic 65.0%
GTGGAGGGCGATGGAGTCGT+CGG + chr2.4:76004994-76005013 None:intergenic 65.0%
TGAAGGGGAACGGTGGGGAC+AGG + chr2.4:76005047-76005066 None:intergenic 65.0%
TGGAGGGCGATGGAGTCGTC+GGG + chr2.4:76004993-76005012 None:intergenic 65.0%
TCGGGAATCGGTGGACGGCG+CGG + chr2.4:76004975-76004994 None:intergenic 70.0%
GGAATCGGTGGACGGCGCGG+CGG + chr2.4:76004972-76004991 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 76004909 76007881 76004909 ID=MS.gene072040
chr2.4 mRNA 76004909 76007881 76004909 ID=MS.gene072040.t1;Parent=MS.gene072040
chr2.4 exon 76006832 76007881 76006832 ID=MS.gene072040.t1.exon1;Parent=MS.gene072040.t1
chr2.4 CDS 76006832 76007881 76006832 ID=cds.MS.gene072040.t1;Parent=MS.gene072040.t1
chr2.4 exon 76005582 76005987 76005582 ID=MS.gene072040.t1.exon2;Parent=MS.gene072040.t1
chr2.4 CDS 76005582 76005987 76005582 ID=cds.MS.gene072040.t1;Parent=MS.gene072040.t1
chr2.4 exon 76005233 76005334 76005233 ID=MS.gene072040.t1.exon3;Parent=MS.gene072040.t1
chr2.4 CDS 76005233 76005334 76005233 ID=cds.MS.gene072040.t1;Parent=MS.gene072040.t1
chr2.4 exon 76004909 76005132 76004909 ID=MS.gene072040.t1.exon4;Parent=MS.gene072040.t1
chr2.4 CDS 76004909 76005132 76004909 ID=cds.MS.gene072040.t1;Parent=MS.gene072040.t1
Gene Sequence

>MS.gene072040

ATGGATCTATCACACCATCAATCCAATCTATCTCTCAATTTCTCATCTTCTCACGCTTCTCCGCCGCGCCGTCCACCGATTCCCGACGACTCCATCGCCCTCCACCTCGAATCCAGCTTCCGCGATCCATCAAACCCTGTCCCCACCGTTCCCCTTCAGCTCATGGAACCACAAACAGAGAAAGAAAACGGTAACGCTATCGATATCGAATCCAACAACGATGAAGATGATAGAGAAGTTGAAGAATTTCGTATTCTAGGTCATTCAATGTGTATCAAAAGACGAAGAGATTCCGAATCCTCTACAATCACAACCAAGAGAGCTTCCGTAGAATCCGATCGAGGTGATCGTCCACTTGATCTCGAGTCACGAAAAGCCGCGGTTCGATCGTGGGGTGATCAACCCTTACAGGTAGCGGATCCTGCTATATACGAGATTATAGAAAAAGAGAAAAAGCGTCAATTCAAAGGGATTGAATTGATAGCTTCTGAGAATTTTGTTTGTAGGGCTGTGATGGAAGCACTTGGAAGCCATTTAACGAATAAATACTCTGAAGGAATGCCTGGTGCACGTTACTATGGTGGAAATCAATATATAGATGAAATTGAAACGCTTTGCTGCGAGCGTGCTTTGGCTGCGTTTAATCTTGATCCTAAGTGTTGGGGTGTGAATGTGCAGCCATATTCCTGTACTTCGGCTAATTTTGCTGTGTATACTGGATTGCTGTCGCCGGGGGATAGAATTATGGGGTTGGATACTCCTTCCGGAGGGAATACTAGTCATGGATATTATACTCCGAATGGGAAGAAAGTTTCTGGGGCTTCAATATTCTTTGAGAGTTTAGCTTATAAGATTAATCCTCAATCGGGTTTTATTGATTATGATAAGCTTGAAGAAAGGGCACTTGATTTTCGTCCTAAGATACTTATTTGTGGTGGGAGTTCTTATCCTCGAGAATGGGATTATGCTAAGTTTAGACATGTTGCAGATAAATGTGGAGCTGTGTTATTGTGTGACATGGCTCAGATTAGTGGGCTAATTGCAGCCAAGGTGTGAAACATTTTCCTTACAATATTTGTGGAGTTAGAATTTCTTACTGTTTCTAGTTAACTTTGAAAGTTTAGTAGGGCTTGTGTCGGTGTTCCTTCATTGTTGTTATTGATTGCACTTAGTCAACGAGTTGGGCAATTATAGGATTTTTTTTTATTATTACGATATGATATGATTCTTTACCATTCCATCCTAAGCAACAAAGTTCATCTATGACTTAGCACATATTTTGAATTAGTCCCTAAAATTGAATTTTATCGATCACATTTGTAGTAGGCCTTTTCGATCCGTCAATTTAGTCCTTGAAATTGTTCTTTAGGGACAATGTAATCGAGAATTTTTTAAATTATGGGACCATTTTATAATTTCGTTAACTTCAAAGACTAAATTGTCAACACCATACAATTTCCAGAACTATATTGGTGATTCATTCTTTTTAAAATTCACACCTGTTTAATCTTTTATGTTTTACCAATACACATGCTGATATAGATTTCAGTTTGACTTAATGGCAGAGTCCCTTTATTGTGGTTAATAGTGTGGGTCATGGACTATGAGAATTCTGCTTAGTGTCAGAGACTCGATATCACTATCTGGATCCCATAGTGGTCTACTAGTTTTAATAAAATTTTCTGCTAATCTGAATACTGTTTTGTCCATATTGACTTTAATGCCTTATACACTTTCAAGTTAATCCTAGTTGGTCATTTTCTGTAATTTCTGGATGGGTGGTTTAAGTCCATTATTGCCCTTTGCACAAATATCTAATAAATTGTGTACTTTTAATATGAAGATATAGATACTTGTTGTTTTCTTTAACAGTATGGTTTTCTGGTCCTTGCAGGAGTGTGTGAACCCTTTTGATTATTGTGATGTTGTTACATCGACAACTCACAAGAGTCTTCGAGGTCCAAGGGGTGGTATAATTTTTTATCGGAAGGGAACAAAACCAAGGAAGAGAGGGATACTTCTTACTCAGGGACATGAAAGTGATCAATATGACTTTGAAGAAAAGATAAACTTTGCTGTTTTCCCATCATTGCAAGGCGGACCTCATAATAACCATATTGCCGCCCTTGCTATTGCATTAAAACAAGTGGCCACTCCTGAGTATAAGGCATACATGCAGCAGGTGAAGAAGAATGCTCAAGCTTTAGCATCTGCTCTGTTGAGAAGAAAATGCCGCTTGGTAACTGGGGGTACAGACAACCATTTATTACTTTGGGATTTAAGGCCCCTGGGGTTGACAGGTATTATATGATCGTGTGATATTTTGACTATATAAGTTGCATCTTTGTTTGTTAAGCGCTAATATGTCAACTAGACTCGTTTAGGTCGCATGTTTTCTGCACTTTGCATTGACTTTGGGTTTGATAGCTACTTTTGTGATCACAAATTATGCTGTAATCATATGGTTCAAGCTGGACCATTAGTGACATTTCGTTCTTATGTTTTTGTATACGGTAACAACAATACCTTATTTTTTTTGGTGTGCAGGTAAATTTTACGAGAAGGTCTGTGAGGCATGTCATATTACTTTGAATAAAATTGCTATTTTTGGTGACAATGGAATTATAATTCCTGGAGGAGTAAGGATAGGTAAGCAATAATTTTATATGCTTGAATCTTTATGTTTTGTATGCTCAAGATATTCGATTGACAGTGCATTCTTATGAGATTTTTATGTTGTATCACCAAGGTACCCCCGCCATGACTTCAAGAGGGTGTTTGGAGGCCGATTTTGAGACGATGGCTGATTTTCTCTTTAGAGCTGCACAAATTGCAAACATGCTGCAGAGGGAGCATGGGAAATTGCAGAAGACTATTTCGAAGGTACTTGAGAGCAATAGGGACATTCTTGAGCTCCGGGTACGGGTTGAAGCTTTTGCAACACAGTTTGCTTTGCCGGGTTTTGACATTTGA
Protein sequence

>MS.gene072040.t1

MDLSHHQSNLSLNFSSSHASPPRRPPIPDDSIALHLESSFRDPSNPVPTVPLQLMEPQTEKENGNAIDIESNNDEDDREVEEFRILGHSMCIKRRRDSESSTITTKRASVESDRGDRPLDLESRKAAVRSWGDQPLQVADPAIYEIIEKEKKRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGMPGARYYGGNQYIDEIETLCCERALAAFNLDPKCWGVNVQPYSCTSANFAVYTGLLSPGDRIMGLDTPSGGNTSHGYYTPNGKKVSGASIFFESLAYKINPQSGFIDYDKLEERALDFRPKILICGGSSYPREWDYAKFRHVADKCGAVLLCDMAQISGLIAAKECVNPFDYCDVVTSTTHKSLRGPRGGIIFYRKGTKPRKRGILLTQGHESDQYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALASALLRRKCRLVTGGTDNHLLLWDLRPLGLTGKFYEKVCEACHITLNKIAIFGDNGIIIPGGVRIGTPAMTSRGCLEADFETMADFLFRAAQIANMLQREHGKLQKTISKVLESNRDILELRVRVEAFATQFALPGFDI