AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene047182

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene047182.t1 MTR_2g006570 98.651 593 8 0 1 593 1 593 0.0 1222
MS.gene047182.t1 MTR_2g006570 98.815 422 5 0 172 593 1 422 0.0 880
MS.gene047182.t1 MTR_3g073470 66.275 596 168 8 7 592 4 576 0.0 800
MS.gene047182.t1 MTR_8g081510 64.009 464 162 1 128 591 4 462 0.0 643
MS.gene047182.t1 MTR_3g084310 64.009 464 162 1 128 591 4 462 0.0 638
MS.gene047182.t1 MTR_3g084310 67.486 366 114 1 128 493 4 364 0.0 531
MS.gene047182.t1 MTR_5g030950 53.928 471 202 6 130 592 47 510 1.79e-170 494
MS.gene047182.t1 MTR_5g067060 53.004 466 207 5 133 593 42 500 8.47e-170 492
MS.gene047182.t1 MTR_2g018290 52.034 467 203 5 130 590 81 532 4.79e-166 484
MS.gene047182.t1 MTR_7g108420 43.820 445 200 10 161 591 1 409 2.63e-107 329
MS.gene047182.t1 MTR_3g062030 49.367 79 36 1 403 481 13 87 2.17e-15 76.3
MS.gene047182.t1 MTR_1g073580 39.583 96 58 0 446 541 83 178 2.83e-15 76.3
MS.gene047182.t1 MTR_1g073580 38.158 76 45 1 293 368 10 83 1.91e-12 67.8
MS.gene047182.t1 MTR_7g070020 47.887 71 30 1 465 528 1 71 7.50e-15 71.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene047182.t1 AT1G22020 69.551 601 162 4 7 593 6 599 0.0 864
MS.gene047182.t1 AT1G22020 69.551 601 162 4 7 593 6 599 0.0 864
MS.gene047182.t1 AT1G36370 70.420 595 168 4 1 590 1 592 0.0 846
MS.gene047182.t1 AT4G13930 64.009 464 162 1 128 591 4 462 0.0 632
MS.gene047182.t1 AT4G13890 62.876 466 168 1 128 593 4 464 0.0 621
MS.gene047182.t1 AT4G13890 65.903 393 129 1 128 520 4 391 0.0 552
MS.gene047182.t1 AT4G37930 54.352 471 200 6 130 592 46 509 2.48e-176 509
MS.gene047182.t1 AT4G32520 50.837 478 211 5 119 590 69 528 1.26e-168 490
MS.gene047182.t1 AT4G32520 50.837 478 211 5 119 590 69 528 1.26e-168 490
MS.gene047182.t1 AT5G26780 52.866 471 207 6 130 592 46 509 2.63e-168 489
MS.gene047182.t1 AT5G26780 52.866 471 207 6 130 592 46 509 2.63e-168 489
MS.gene047182.t1 AT5G26780 51.129 487 207 7 130 592 46 525 3.78e-164 479
MS.gene047182.t1 AT5G26780 51.129 487 207 7 130 592 46 525 3.78e-164 479

Find 162 sgRNAs with CRISPR-Local

Find 257 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTATTACTTTGGGATTTA+AGG 0.118090 2.2:-73219716 MS.gene047182:CDS
GTTGAAGAATTTCGTATTCT+AGG 0.184768 2.2:-73221739 MS.gene047182:CDS
CAGAGTATTTATTCGTTAAA+TGG 0.201982 2.2:+73221446 None:intergenic
CCGAATGGGAAGAAAGTTTC+TGG 0.213302 2.2:-73221181 MS.gene047182:CDS
TGCAACACAGTTTGCTTTGC+CGG 0.255179 2.2:-73219036 MS.gene047182:CDS
CGAAGGTACTTGAGAGCAAT+AGG 0.295279 2.2:-73219094 MS.gene047182:CDS
AGAAAATGCCGCTTGGTAAC+TGG 0.309679 2.2:-73219753 MS.gene047182:CDS
TTAAATCCCAAAGTAATAAA+TGG 0.319511 2.2:+73219718 None:intergenic
TGAGAAATTGAGAGATAGAT+TGG 0.320061 2.2:+73221954 None:intergenic
AGTGGCCACTCCTGAGTATA+AGG 0.321450 2.2:-73219832 MS.gene047182:CDS
TCTATCATCTTCATCGTTGT+TGG 0.322696 2.2:+73221765 None:intergenic
CAGACAACCATTTATTACTT+TGG 0.331502 2.2:-73219725 MS.gene047182:CDS
TAATCTTGATCCTAAGTGTT+GGG 0.334502 2.2:-73221335 MS.gene047182:CDS
GCTTTGCTGCGAGCGTGCTT+TGG 0.338716 2.2:-73221365 MS.gene047182:CDS
AGACAACCATTTATTACTTT+GGG 0.342729 2.2:-73219724 MS.gene047182:CDS
ACTTTGGGATTTAAGGCCCC+TGG 0.351644 2.2:-73219709 MS.gene047182:CDS
CAATAGCAAGGGCGGCAATA+TGG 0.355108 2.2:+73219865 None:intergenic
CCACCACAAATAAGTATCTT+AGG 0.356752 2.2:+73221061 None:intergenic
CATGACTTCAAGAGGGTGTT+TGG 0.369981 2.2:-73219213 MS.gene047182:CDS
TGAAGGGGAACGGTGGGGAC+AGG 0.380209 2.2:+73221841 None:intergenic
GACAATGGAATTATAATTCC+TGG 0.388060 2.2:-73219360 MS.gene047182:CDS
GGTTGTGATTGTAGAGGATT+CGG 0.392422 2.2:+73221684 None:intergenic
CCAGAAACTTTCTTCCCATT+CGG 0.397392 2.2:+73221181 None:intergenic
TTAGCCGAAGTACAGGAATA+TGG 0.398254 2.2:+73221298 None:intergenic
ATCAGCCATCGTCTCAAAAT+CGG 0.409423 2.2:+73219187 None:intergenic
ATGCCTGGTGCACGTTACTA+TGG 0.415234 2.2:-73221418 MS.gene047182:CDS
ATGGGGTTGGATACTCCTTC+CGG 0.419166 2.2:-73221232 MS.gene047182:CDS
AGCAGGATCCGCTACCTGTA+AGG 0.422442 2.2:+73221573 None:intergenic
TGAGAGATAGATTGGATTGA+TGG 0.427231 2.2:+73221962 None:intergenic
TTATAAGATTAATCCTCAAT+CGG 0.429225 2.2:-73221131 MS.gene047182:CDS
CTTTGGGATTTAAGGCCCCT+GGG 0.430295 2.2:-73219708 MS.gene047182:CDS
GCGATGGAGTCGTCGGGAAT+CGG 0.431171 2.2:+73221901 None:intergenic
ACAACATCACAATAATCAAA+AGG 0.431468 2.2:+73220071 None:intergenic
TGAGGTCCGCCTTGCAATGA+TGG 0.431877 2.2:+73219894 None:intergenic
CACCGTTCCCCTTCAGCTCA+TGG 0.437513 2.2:-73221833 MS.gene047182:CDS
CGAATGGGAAGAAAGTTTCT+GGG 0.444376 2.2:-73221180 MS.gene047182:CDS
GGATTCTACGGAAGCTCTCT+TGG 0.445479 2.2:+73221663 None:intergenic
GTTTGATGGATCGCGGAAGC+TGG 0.451254 2.2:+73221864 None:intergenic
CGTCCTAAGATACTTATTTG+TGG 0.451580 2.2:-73221064 MS.gene047182:CDS
AGAAGTATCCCTCTCTTCCT+TGG 0.451637 2.2:+73219978 None:intergenic
TTAAGGCCCCTGGGGTTGAC+AGG 0.455853 2.2:-73219699 MS.gene047182:intron
GTGGGGTGATCAACCCTTAC+AGG 0.456045 2.2:-73221587 MS.gene047182:CDS
TCTATAATCTCGTATATAGC+AGG 0.459587 2.2:+73221556 None:intergenic
CATTCTTGAGCTCCGGGTAC+GGG 0.461291 2.2:-73219069 MS.gene047182:CDS
ACATTCTTGAGCTCCGGGTA+CGG 0.461313 2.2:-73219070 MS.gene047182:CDS
TATAAGATTAATCCTCAATC+GGG 0.462240 2.2:-73221130 MS.gene047182:CDS
ATTATGATAAGCTTGAAGAA+AGG 0.464865 2.2:-73221099 MS.gene047182:CDS
GAAAATGCCGCTTGGTAACT+GGG 0.468450 2.2:-73219752 MS.gene047182:CDS
ATAGGGACATTCTTGAGCTC+CGG 0.469357 2.2:-73219076 MS.gene047182:CDS
TATACTGGATTGCTGTCGCC+GGG 0.478319 2.2:-73221265 MS.gene047182:CDS
GGAGTTCTTATCCTCGAGAA+TGG 0.479061 2.2:-73221039 MS.gene047182:CDS
TTATGATAAGCTTGAAGAAA+GGG 0.479642 2.2:-73221098 MS.gene047182:CDS
GTATACTGGATTGCTGTCGC+CGG 0.479657 2.2:-73221266 MS.gene047182:CDS
AGCAAAATTAGCCGAAGTAC+AGG 0.484132 2.2:+73221291 None:intergenic
GCAACACAGTTTGCTTTGCC+GGG 0.486245 2.2:-73219035 MS.gene047182:CDS
GTGGAGGGCGATGGAGTCGT+CGG 0.486855 2.2:+73221894 None:intergenic
TGGAGGGCGATGGAGTCGTC+GGG 0.490866 2.2:+73221895 None:intergenic
AACATGCTGCAGAGGGAGCA+TGG 0.493304 2.2:-73219137 MS.gene047182:CDS
CACCCTCTTGAAGTCATGGC+GGG 0.494924 2.2:+73219218 None:intergenic
TGCTATTGCATTAAAACAAG+TGG 0.496306 2.2:-73219850 MS.gene047182:CDS
AAATACTCTGAAGGAATGCC+TGG 0.501098 2.2:-73221433 MS.gene047182:CDS
TTACCTATCCTTACTCCTCC+AGG 0.504409 2.2:+73219342 None:intergenic
TTAATCTTGATCCTAAGTGT+TGG 0.507914 2.2:-73221336 MS.gene047182:CDS
CATGGATATTATACTCCGAA+TGG 0.509491 2.2:-73221196 MS.gene047182:CDS
GAAGGTACTTGAGAGCAATA+GGG 0.510496 2.2:-73219093 MS.gene047182:CDS
ACGGTGGGGACAGGGTTTGA+TGG 0.511010 2.2:+73221850 None:intergenic
GGAAGCTGGATTCGAGGTGG+AGG 0.511850 2.2:+73221878 None:intergenic
AATCTTGATCCTAAGTGTTG+GGG 0.512037 2.2:-73221334 MS.gene047182:CDS
GAGTTCTTATCCTCGAGAAT+GGG 0.512092 2.2:-73221038 MS.gene047182:CDS
GGATTCGAGGTGGAGGGCGA+TGG 0.513782 2.2:+73221885 None:intergenic
CCACAAACAGAGAAAGAAAA+CGG 0.514774 2.2:-73221808 MS.gene047182:CDS
ACAACTCACAAGAGTCTTCG+AGG 0.517309 2.2:-73220041 MS.gene047182:CDS
ATATAATACCTGTCAACCCC+AGG 0.518740 2.2:+73219691 None:intergenic
CCTAAGATACTTATTTGTGG+TGG 0.520445 2.2:-73221061 MS.gene047182:CDS
TTATAATTCCTGGAGGAGTA+AGG 0.522728 2.2:-73219350 MS.gene047182:CDS
TAGGGACATTCTTGAGCTCC+GGG 0.524029 2.2:-73219075 MS.gene047182:CDS
ACAAGAGTCTTCGAGGTCCA+AGG 0.527206 2.2:-73220034 MS.gene047182:CDS
ATGAGCTGAAGGGGAACGGT+GGG 0.527250 2.2:+73221835 None:intergenic
AAAAGCCGCGGTTCGATCGT+GGG 0.528207 2.2:-73221605 MS.gene047182:CDS
CAAGAGTCTTCGAGGTCCAA+GGG 0.534687 2.2:-73220033 MS.gene047182:CDS
CAACATCACAATAATCAAAA+GGG 0.534805 2.2:+73220072 None:intergenic
GAAAAGCCGCGGTTCGATCG+TGG 0.537478 2.2:-73221606 MS.gene047182:CDS
ATGGATATTATACTCCGAAT+GGG 0.537996 2.2:-73221195 MS.gene047182:CDS
CTAAGATACTTATTTGTGGT+GGG 0.538564 2.2:-73221060 MS.gene047182:CDS
GAAGGGGAACGGTGGGGACA+GGG 0.539433 2.2:+73221842 None:intergenic
TGCATGTATGCCTTATACTC+AGG 0.539801 2.2:+73219822 None:intergenic
CCACCATAGTAACGTGCACC+AGG 0.539950 2.2:+73221415 None:intergenic
ATCACCTCGATCGGATTCTA+CGG 0.544145 2.2:+73221651 None:intergenic
TTTGTGGTTCCATGAGCTGA+AGG 0.545508 2.2:+73221824 None:intergenic
TGTGACATGGCTCAGATTAG+TGG 0.548967 2.2:-73220965 MS.gene047182:CDS
GACTTCAAGAGGGTGTTTGG+AGG 0.553311 2.2:-73219210 MS.gene047182:CDS
GATCGCGGAAGCTGGATTCG+AGG 0.556245 2.2:+73221872 None:intergenic
GCAGGATCCGCTACCTGTAA+GGG 0.557738 2.2:+73221574 None:intergenic
ACATGCTGCAGAGGGAGCAT+GGG 0.557940 2.2:-73219136 MS.gene047182:CDS
TAATCAATAAAACCCGATTG+AGG 0.563006 2.2:+73221118 None:intergenic
CAAACACCCTCTTGAAGTCA+TGG 0.563636 2.2:+73219214 None:intergenic
AACCCCATAATTCTATCCCC+CGG 0.565369 2.2:+73221247 None:intergenic
ACATTCACACCCCAACACTT+AGG 0.565506 2.2:+73221325 None:intergenic
GAGAGGGATACTTCTTACTC+AGG 0.566579 2.2:-73219970 MS.gene047182:CDS
TAGTGGGCTAATTGCAGCCA+AGG 0.567530 2.2:-73220948 MS.gene047182:intron
GAACAAAACCAAGGAAGAGA+GGG 0.569137 2.2:-73219986 MS.gene047182:CDS
AGCTGTGTTATTGTGTGACA+TGG 0.570438 2.2:-73220978 MS.gene047182:CDS
TTCCATGAGCTGAAGGGGAA+CGG 0.572001 2.2:+73221831 None:intergenic
CAAAAGCTTCAACCCGTACC+CGG 0.575415 2.2:+73219057 None:intergenic
TTAACGAATAAATACTCTGA+AGG 0.575868 2.2:-73221442 MS.gene047182:CDS
TCCGGAGGGAATACTAGTCA+TGG 0.579396 2.2:-73221214 MS.gene047182:CDS
TGATCAACCCTTACAGGTAG+CGG 0.579575 2.2:-73221581 MS.gene047182:CDS
CATGAGCTGAAGGGGAACGG+TGG 0.580804 2.2:+73221834 None:intergenic
TTTCGTGACTCGAGATCAAG+TGG 0.581695 2.2:+73221625 None:intergenic
TCTCTTGGTTGTGATTGTAG+AGG 0.582378 2.2:+73221678 None:intergenic
TCCATGACTAGTATTCCCTC+CGG 0.583312 2.2:+73221213 None:intergenic
TACTGGATTGCTGTCGCCGG+GGG 0.583385 2.2:-73221263 MS.gene047182:CDS
GTATAAGGCATACATGCAGC+AGG 0.583723 2.2:-73219817 MS.gene047182:CDS
GAGGTCCGCCTTGCAATGAT+GGG 0.585958 2.2:+73219895 None:intergenic
GGAACAAAACCAAGGAAGAG+AGG 0.587356 2.2:-73219987 MS.gene047182:CDS
AAAGCCGCGGTTCGATCGTG+GGG 0.587387 2.2:-73221604 MS.gene047182:CDS
ATGGAGTCGTCGGGAATCGG+TGG 0.587439 2.2:+73221904 None:intergenic
ACCCTCTTGAAGTCATGGCG+GGG 0.594967 2.2:+73219219 None:intergenic
TCGGGAATCGGTGGACGGCG+CGG 0.594984 2.2:+73221913 None:intergenic
AGACATGTTGCAGATAAATG+TGG 0.598660 2.2:-73221001 MS.gene047182:CDS
GTTGAGAAGAAAATGCCGCT+TGG 0.600657 2.2:-73219760 MS.gene047182:CDS
TGAGCTGAAGGGGAACGGTG+GGG 0.601633 2.2:+73221836 None:intergenic
AGTCGTCGGGAATCGGTGGA+CGG 0.602247 2.2:+73221908 None:intergenic
CCCTCTTGAAGTCATGGCGG+GGG 0.602417 2.2:+73219220 None:intergenic
TTTGGGATTTAAGGCCCCTG+GGG 0.603999 2.2:-73219707 MS.gene047182:CDS
GAAGCTGGATTCGAGGTGGA+GGG 0.604018 2.2:+73221879 None:intergenic
TGTGGTTCCATGAGCTGAAG+GGG 0.604077 2.2:+73221826 None:intergenic
AAATTGCAAACATGCTGCAG+AGG 0.606043 2.2:-73219145 MS.gene047182:CDS
ATTCCTGGAGGAGTAAGGAT+AGG 0.606404 2.2:-73219345 MS.gene047182:intron
TTGTGGTTCCATGAGCTGAA+GGG 0.608128 2.2:+73221825 None:intergenic
AATTGCAAACATGCTGCAGA+GGG 0.608187 2.2:-73219144 MS.gene047182:CDS
GGAATCGGTGGACGGCGCGG+AGG 0.611477 2.2:+73221916 None:intergenic
AAGTGGACGATCACCTCGAT+CGG 0.612859 2.2:+73221642 None:intergenic
GTGACATGGCTCAGATTAGT+GGG 0.613437 2.2:-73220964 MS.gene047182:CDS
ATTGCAGAAGACTATTTCGA+AGG 0.614744 2.2:-73219111 MS.gene047182:CDS
TATAATACCTGTCAACCCCA+GGG 0.618108 2.2:+73219692 None:intergenic
GCAGCCATATTCCTGTACTT+CGG 0.621993 2.2:-73221302 MS.gene047182:CDS
GCGGCAATATGGTTATTATG+AGG 0.625894 2.2:+73219876 None:intergenic
CGCGGAAGCTGGATTCGAGG+TGG 0.631260 2.2:+73221875 None:intergenic
AAAATGCCGCTTGGTAACTG+GGG 0.632870 2.2:-73219751 MS.gene047182:CDS
ATCGGAAGGGAACAAAACCA+AGG 0.639567 2.2:-73219995 MS.gene047182:CDS
CCTGGTGCACGTTACTATGG+TGG 0.642444 2.2:-73221415 MS.gene047182:CDS
AGAGGGATACTTCTTACTCA+GGG 0.644868 2.2:-73219969 MS.gene047182:CDS
AGTCTTCGAGGTCCAAGGGG+TGG 0.648124 2.2:-73220029 MS.gene047182:CDS
AGGGCTGTGATGGAAGCACT+TGG 0.648724 2.2:-73221472 MS.gene047182:CDS
GAATGGGAAGAAAGTTTCTG+GGG 0.652417 2.2:-73221179 MS.gene047182:CDS
ATACTGGATTGCTGTCGCCG+GGG 0.657042 2.2:-73221264 MS.gene047182:CDS
TGACTAGTATTCCCTCCGGA+AGG 0.658793 2.2:+73221217 None:intergenic
GGTTGGATACTCCTTCCGGA+GGG 0.661578 2.2:-73221228 MS.gene047182:CDS
GTATGCCTTATACTCAGGAG+TGG 0.664075 2.2:+73219827 None:intergenic
TTAGCATAATCCCATTCTCG+AGG 0.664741 2.2:+73221028 None:intergenic
GGGTTGGATACTCCTTCCGG+AGG 0.665412 2.2:-73221229 MS.gene047182:CDS
TATGTTCAAATGTCAAAACC+CGG 0.667596 2.2:+73219017 None:intergenic
ATCACCCCACGATCGAACCG+CGG 0.669715 2.2:+73221600 None:intergenic
AAATGCCGCTTGGTAACTGG+GGG 0.673920 2.2:-73219750 MS.gene047182:CDS
ACACCCTCTTGAAGTCATGG+CGG 0.681018 2.2:+73219217 None:intergenic
AAGAGTCTTCGAGGTCCAAG+GGG 0.697636 2.2:-73220032 MS.gene047182:CDS
GGACAGGGTTTGATGGATCG+CGG 0.699775 2.2:+73221857 None:intergenic
TCTCGAGTCACGAAAAGCCG+CGG 0.714087 2.2:-73221617 MS.gene047182:CDS
AATGGAATTATAATTCCTGG+AGG 0.715263 2.2:-73219357 MS.gene047182:CDS
ATAATACCTGTCAACCCCAG+GGG 0.725327 2.2:+73219693 None:intergenic
GCTTCCGTAGAATCCGATCG+AGG 0.738124 2.2:-73221655 MS.gene047182:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGTTAACGAAATTATAAAA+TGG + chr2.2:73220428-73220447 None:intergenic 15.0%
!! TAAAACATAAAAGATTAAAC+AGG + chr2.2:73220522-73220541 None:intergenic 15.0%
!!! ATCGAGAATTTTTTAAATTA+TGG - chr2.2:73220400-73220419 MS.gene047182:intron 15.0%
!!! ATCGATAAAATTCAATTTTA+GGG + chr2.2:73220313-73220332 None:intergenic 15.0%
!!! TCGAGAATTTTTTAAATTAT+GGG - chr2.2:73220401-73220420 MS.gene047182:intron 15.0%
!!! TTGAATAAAATTGCTATTTT+TGG - chr2.2:73221614-73221633 MS.gene047182:CDS 15.0%
!! TTAAATCCCAAAGTAATAAA+TGG + chr2.2:73221283-73221302 None:intergenic 20.0%
!! TTATAAGATTAATCCTCAAT+CGG - chr2.2:73219867-73219886 MS.gene047182:CDS 20.0%
!! TTATTAGATATTTGTGCAAA+GGG + chr2.2:73220822-73220841 None:intergenic 20.0%
!! TTTATTAGATATTTGTGCAA+AGG + chr2.2:73220823-73220842 None:intergenic 20.0%
!!! ATTTATTACTTTGGGATTTA+AGG - chr2.2:73221282-73221301 MS.gene047182:CDS 20.0%
!!! CAACAATACCTTATTTTTTT+TGG - chr2.2:73221543-73221562 MS.gene047182:CDS 20.0%
!!! GATCGATAAAATTCAATTTT+AGG + chr2.2:73220314-73220333 None:intergenic 20.0%
!!! TTAACTTTGAAAGTTTAGTA+GGG - chr2.2:73220128-73220147 MS.gene047182:intron 20.0%
! AATTTCAAGGACTAAATTGA+CGG + chr2.2:73220361-73220380 None:intergenic 25.0%
! ACAACATCACAATAATCAAA+AGG + chr2.2:73220930-73220949 None:intergenic 25.0%
! ACACTATTAACCACAATAAA+GGG + chr2.2:73220592-73220611 None:intergenic 25.0%
! AGACAACCATTTATTACTTT+GGG - chr2.2:73221274-73221293 MS.gene047182:CDS 25.0%
! ATTATGATAAGCTTGAAGAA+AGG - chr2.2:73219899-73219918 MS.gene047182:CDS 25.0%
! CAAATTATGCTGTAATCATA+TGG - chr2.2:73221468-73221487 MS.gene047182:CDS 25.0%
! CAACATCACAATAATCAAAA+GGG + chr2.2:73220929-73220948 None:intergenic 25.0%
! TACAATTTCCAGAACTATAT+TGG - chr2.2:73220471-73220490 MS.gene047182:intron 25.0%
! TATAAGATTAATCCTCAATC+GGG - chr2.2:73219868-73219887 MS.gene047182:CDS 25.0%
! TTAACAAACAAAGATGCAAT+CGG + chr2.2:73221361-73221380 None:intergenic 25.0%
! TTAACGAATAAATACTCTGA+AGG - chr2.2:73219556-73219575 MS.gene047182:intron 25.0%
! TTATGATAAGCTTGAAGAAA+GGG - chr2.2:73219900-73219919 MS.gene047182:CDS 25.0%
! TTTATTGTGGTTAATAGTGT+GGG - chr2.2:73220592-73220611 MS.gene047182:intron 25.0%
!! ATAAGGCATTAAAGTCAATA+TGG + chr2.2:73220730-73220749 None:intergenic 25.0%
!! ATTTTTATGTTGTATCACCA+AGG - chr2.2:73221753-73221772 MS.gene047182:CDS 25.0%
!! CAGAGTATTTATTCGTTAAA+TGG + chr2.2:73219555-73219574 None:intergenic 25.0%
!! CATTTTCCTTACAATATTTG+TGG - chr2.2:73220080-73220099 MS.gene047182:CDS 25.0%
!! GATTAACTTGAAAGTGTATA+AGG + chr2.2:73220747-73220766 None:intergenic 25.0%
!! GTTAACTTTGAAAGTTTAGT+AGG - chr2.2:73220127-73220146 MS.gene047182:intron 25.0%
!! TAGATTTCAGTTTGACTTAA+TGG - chr2.2:73220560-73220579 MS.gene047182:intron 25.0%
!!! ATATAGTTCTGGAAATTGTA+TGG + chr2.2:73220471-73220490 None:intergenic 25.0%
!!! ATTTTCTGTAATTTCTGGAT+GGG - chr2.2:73220777-73220796 MS.gene047182:intron 25.0%
!!! CGTTCTTATGTTTTTGTATA+CGG - chr2.2:73221517-73221536 MS.gene047182:CDS 25.0%
!!! GGTATAATTTTTTATCGGAA+GGG - chr2.2:73220990-73221009 MS.gene047182:CDS 25.0%
!!! TGGTATAATTTTTTATCGGA+AGG - chr2.2:73220989-73221008 MS.gene047182:CDS 25.0%
!!! TGTTGTTTTCTTTAACAGTA+TGG - chr2.2:73220875-73220894 MS.gene047182:intron 25.0%
!!! TTCTGAGAATTTTGTTTGTA+GGG - chr2.2:73219507-73219526 MS.gene047182:intron 25.0%
!!! TTGTTTTAATGCAATAGCAA+GGG + chr2.2:73221147-73221166 None:intergenic 25.0%
AATGGAATTATAATTCCTGG+AGG - chr2.2:73221641-73221660 MS.gene047182:CDS 30.0%
AGTCCTTGAAATTGTTCTTT+AGG - chr2.2:73220368-73220387 MS.gene047182:intron 30.0%
ATCTATATCAGCATGTGTAT+TGG + chr2.2:73220545-73220564 None:intergenic 30.0%
ATGAATCACCAATATAGTTC+TGG + chr2.2:73220482-73220501 None:intergenic 30.0%
ATGGATATTATACTCCGAAT+GGG - chr2.2:73219803-73219822 MS.gene047182:CDS 30.0%
ATTACAGAAAATGACCAACT+AGG + chr2.2:73220769-73220788 None:intergenic 30.0%
CACACTATTAACCACAATAA+AGG + chr2.2:73220593-73220612 None:intergenic 30.0%
CAGACAACCATTTATTACTT+TGG - chr2.2:73221273-73221292 MS.gene047182:CDS 30.0%
CTAACTCCACAAATATTGTA+AGG + chr2.2:73220089-73220108 None:intergenic 30.0%
CTAAGATACTTATTTGTGGT+GGG - chr2.2:73219938-73219957 MS.gene047182:CDS 30.0%
CTTTATTGTGGTTAATAGTG+TGG - chr2.2:73220591-73220610 MS.gene047182:intron 30.0%
GACAATGGAATTATAATTCC+TGG - chr2.2:73221638-73221657 MS.gene047182:CDS 30.0%
GCAATCAATAACAACAATGA+AGG + chr2.2:73220168-73220187 None:intergenic 30.0%
GTCCTTGAAATTGTTCTTTA+GGG - chr2.2:73220369-73220388 MS.gene047182:intron 30.0%
GTTGAAGAATTTCGTATTCT+AGG - chr2.2:73219259-73219278 MS.gene047182:intron 30.0%
TAAAAAATTATACCACCCCT+TGG + chr2.2:73220984-73221003 None:intergenic 30.0%
TAAAACTAGTAGACCACTAT+GGG + chr2.2:73220673-73220692 None:intergenic 30.0%
TAAGAACGAAATGTCACTAA+TGG + chr2.2:73221505-73221524 None:intergenic 30.0%
TAATCAATAAAACCCGATTG+AGG + chr2.2:73219883-73219902 None:intergenic 30.0%
TAATCTTGATCCTAAGTGTT+GGG - chr2.2:73219663-73219682 MS.gene047182:intron 30.0%
TATGTCAACTAGACTCATTT+AGG - chr2.2:73221388-73221407 MS.gene047182:CDS 30.0%
TCTATAATCTCGTATATAGC+AGG + chr2.2:73219445-73219464 None:intergenic 30.0%
TGAGAAATTGAGAGATAGAT+TGG + chr2.2:73219047-73219066 None:intergenic 30.0%
TGCTATTGCATTAAAACAAG+TGG - chr2.2:73221148-73221167 MS.gene047182:CDS 30.0%
TTAAAACTAGTAGACCACTA+TGG + chr2.2:73220674-73220693 None:intergenic 30.0%
TTAATCTTGATCCTAAGTGT+TGG - chr2.2:73219662-73219681 MS.gene047182:intron 30.0%
TTATCGATCACATTTGTAGT+AGG - chr2.2:73220325-73220344 MS.gene047182:intron 30.0%
! ATAGATGAACTTTGTTGCTT+AGG + chr2.2:73220265-73220284 None:intergenic 30.0%
! TCTTTAACAGTATGGTTTTC+TGG - chr2.2:73220883-73220902 MS.gene047182:intron 30.0%
!! ACTTTCAAGTTAATCCTAGT+TGG - chr2.2:73220752-73220771 MS.gene047182:intron 30.0%
!! AGAAAAAGCGTCAATTCAAA+GGG - chr2.2:73219470-73219489 MS.gene047182:intron 30.0%
!! CATTTTCTGTAATTTCTGGA+TGG - chr2.2:73220776-73220795 MS.gene047182:intron 30.0%
!! CTTCTGAGAATTTTGTTTGT+AGG - chr2.2:73219506-73219525 MS.gene047182:intron 30.0%
!! TGGTCATTTTCTGTAATTTC+TGG - chr2.2:73220772-73220791 MS.gene047182:intron 30.0%
!!! ATTGCTATTTTTGGTGACAA+TGG - chr2.2:73221623-73221642 MS.gene047182:CDS 30.0%
!!! CTTGTTTTAATGCAATAGCA+AGG + chr2.2:73221148-73221167 None:intergenic 30.0%
!!! GGGGTGGTATAATTTTTTAT+CGG - chr2.2:73220985-73221004 MS.gene047182:CDS 30.0%
AAGGAAAATGTTTCACACCT+TGG + chr2.2:73220070-73220089 None:intergenic 35.0%
AGACATGTTGCAGATAAATG+TGG - chr2.2:73219997-73220016 MS.gene047182:CDS 35.0%
ATTGCAGAAGACTATTTCGA+AGG - chr2.2:73221887-73221906 MS.gene047182:CDS 35.0%
ATTTGTGCAAAGGGCAATAA+TGG + chr2.2:73220813-73220832 None:intergenic 35.0%
CATGGATATTATACTCCGAA+TGG - chr2.2:73219802-73219821 MS.gene047182:CDS 35.0%
CCACAAACAGAGAAAGAAAA+CGG - chr2.2:73219190-73219209 MS.gene047182:CDS 35.0%
CCACCACAAATAAGTATCTT+AGG + chr2.2:73219940-73219959 None:intergenic 35.0%
CCTAAGATACTTATTTGTGG+TGG - chr2.2:73219937-73219956 MS.gene047182:CDS 35.0%
CCTGCACACCAAAAAAAATA+AGG + chr2.2:73221554-73221573 None:intergenic 35.0%
CGTCCTAAGATACTTATTTG+TGG - chr2.2:73219934-73219953 MS.gene047182:CDS 35.0%
GTCCCTAAAGAACAATTTCA+AGG + chr2.2:73220374-73220393 None:intergenic 35.0%
TCTATCATCTTCATCGTTGT+TGG + chr2.2:73219236-73219255 None:intergenic 35.0%
TGAGAGATAGATTGGATTGA+TGG + chr2.2:73219039-73219058 None:intergenic 35.0%
TGTAATCATATGGTTCAAGC+TGG - chr2.2:73221478-73221497 MS.gene047182:CDS 35.0%
TTATAATTCCTGGAGGAGTA+AGG - chr2.2:73221648-73221667 MS.gene047182:CDS 35.0%
! AATCTTGATCCTAAGTGTTG+GGG - chr2.2:73219664-73219683 MS.gene047182:intron 35.0%
! ACTAAATTGACGGATCGAAA+AGG + chr2.2:73220351-73220370 None:intergenic 35.0%
! ATGAACTTTGTTGCTTAGGA+TGG + chr2.2:73220261-73220280 None:intergenic 35.0%
! TGCAGGTAAATTTTACGAGA+AGG - chr2.2:73221568-73221587 MS.gene047182:CDS 35.0%
! TTTTAATGCAATAGCAAGGG+CGG + chr2.2:73221144-73221163 None:intergenic 35.0%
!! GAGAAAAAGCGTCAATTCAA+AGG - chr2.2:73219469-73219488 MS.gene047182:intron 35.0%
!! GCTAATTTTGCTGTGTATAC+TGG - chr2.2:73219718-73219737 MS.gene047182:CDS 35.0%
!!! CCTTATTTTTTTTGGTGTGC+AGG - chr2.2:73221551-73221570 MS.gene047182:CDS 35.0%
AAATTGCAAACATGCTGCAG+AGG - chr2.2:73221853-73221872 MS.gene047182:CDS 40.0%
AAGTTTAGTAGGGCTTGTGT+CGG - chr2.2:73220138-73220157 MS.gene047182:intron 40.0%
AATTGCAAACATGCTGCAGA+GGG - chr2.2:73221854-73221873 MS.gene047182:CDS 40.0%
AGAGACTCGATATCACTATC+TGG - chr2.2:73220645-73220664 MS.gene047182:intron 40.0%
AGAGGGATACTTCTTACTCA+GGG - chr2.2:73221029-73221048 MS.gene047182:CDS 40.0%
AGCAAAATTAGCCGAAGTAC+AGG + chr2.2:73219710-73219729 None:intergenic 40.0%
ATATAATACCTGTCAACCCC+AGG + chr2.2:73221310-73221329 None:intergenic 40.0%
ATCAGCCATCGTCTCAAAAT+CGG + chr2.2:73221814-73221833 None:intergenic 40.0%
ATTGCACTTAGTCAACGAGT+TGG - chr2.2:73220183-73220202 MS.gene047182:intron 40.0%
CCAGAAACTTTCTTCCCATT+CGG + chr2.2:73219820-73219839 None:intergenic 40.0%
CGAATGGGAAGAAAGTTTCT+GGG - chr2.2:73219818-73219837 MS.gene047182:CDS 40.0%
GAACAAAACCAAGGAAGAGA+GGG - chr2.2:73221012-73221031 MS.gene047182:CDS 40.0%
GAATGGGAAGAAAGTTTCTG+GGG - chr2.2:73219819-73219838 MS.gene047182:CDS 40.0%
GAGTTCTTATCCTCGAGAAT+GGG - chr2.2:73219960-73219979 MS.gene047182:CDS 40.0%
GCGGCAATATGGTTATTATG+AGG + chr2.2:73221125-73221144 None:intergenic 40.0%
GGTTGTGATTGTAGAGGATT+CGG + chr2.2:73219317-73219336 None:intergenic 40.0%
TATAATACCTGTCAACCCCA+GGG + chr2.2:73221309-73221328 None:intergenic 40.0%
TCTCTTGGTTGTGATTGTAG+AGG + chr2.2:73219323-73219342 None:intergenic 40.0%
TGCATGTATGCCTTATACTC+AGG + chr2.2:73221179-73221198 None:intergenic 40.0%
TTAGCATAATCCCATTCTCG+AGG + chr2.2:73219973-73219992 None:intergenic 40.0%
TTAGCCGAAGTACAGGAATA+TGG + chr2.2:73219703-73219722 None:intergenic 40.0%
TTGCACTTAGTCAACGAGTT+GGG - chr2.2:73220184-73220203 MS.gene047182:intron 40.0%
! AAATACTCTGAAGGAATGCC+TGG - chr2.2:73219565-73219584 MS.gene047182:intron 40.0%
! AGCTGTGTTATTGTGTGACA+TGG - chr2.2:73220020-73220039 MS.gene047182:CDS 40.0%
! ATTTTACGAGAAGGTCTGTG+AGG - chr2.2:73221577-73221596 MS.gene047182:CDS 40.0%
! CCGTTTTCTTTCTCTGTTTG+TGG + chr2.2:73219193-73219212 None:intergenic 40.0%
! CTTTGTTGCTTAGGATGGAA+TGG + chr2.2:73220256-73220275 None:intergenic 40.0%
! TCAACGAGTTGGGCAATTAT+AGG - chr2.2:73220194-73220213 MS.gene047182:intron 40.0%
! TTCTGTAATTTCTGGATGGG+TGG - chr2.2:73220780-73220799 MS.gene047182:intron 40.0%
!! CTGCACTTTGCATTGACTTT+GGG - chr2.2:73221422-73221441 MS.gene047182:CDS 40.0%
!! GAAGGTACTTGAGAGCAATA+GGG - chr2.2:73221905-73221924 MS.gene047182:CDS 40.0%
!! TCTGCACTTTGCATTGACTT+TGG - chr2.2:73221421-73221440 MS.gene047182:CDS 40.0%
!! TTTTGTTTGTAGGGCTGTGA+TGG - chr2.2:73219516-73219535 MS.gene047182:intron 40.0%
AACCCCATAATTCTATCCCC+CGG + chr2.2:73219754-73219773 None:intergenic 45.0%
ACAACTCACAAGAGTCTTCG+AGG - chr2.2:73220957-73220976 MS.gene047182:CDS 45.0%
ACATTCACACCCCAACACTT+AGG + chr2.2:73219676-73219695 None:intergenic 45.0%
ATAATACCTGTCAACCCCAG+GGG + chr2.2:73221308-73221327 None:intergenic 45.0%
ATAGGGACATTCTTGAGCTC+CGG - chr2.2:73221922-73221941 MS.gene047182:CDS 45.0%
ATCACCTCGATCGGATTCTA+CGG + chr2.2:73219350-73219369 None:intergenic 45.0%
ATCGGAAGGGAACAAAACCA+AGG - chr2.2:73221003-73221022 MS.gene047182:CDS 45.0%
ATGGCAGAGTCCCTTTATTG+TGG - chr2.2:73220579-73220598 MS.gene047182:intron 45.0%
ATTCCTGGAGGAGTAAGGAT+AGG - chr2.2:73221653-73221672 MS.gene047182:CDS 45.0%
CAAACACCCTCTTGAAGTCA+TGG + chr2.2:73221787-73221806 None:intergenic 45.0%
CCGAATGGGAAGAAAGTTTC+TGG - chr2.2:73219817-73219836 MS.gene047182:CDS 45.0%
GAGAGGGATACTTCTTACTC+AGG - chr2.2:73221028-73221047 MS.gene047182:CDS 45.0%
GCAGCCATATTCCTGTACTT+CGG - chr2.2:73219696-73219715 MS.gene047182:intron 45.0%
GGAACAAAACCAAGGAAGAG+AGG - chr2.2:73221011-73221030 MS.gene047182:CDS 45.0%
GGAGTTCTTATCCTCGAGAA+TGG - chr2.2:73219959-73219978 MS.gene047182:CDS 45.0%
GTATAAGGCATACATGCAGC+AGG - chr2.2:73221181-73221200 MS.gene047182:CDS 45.0%
GTATGCCTTATACTCAGGAG+TGG + chr2.2:73221174-73221193 None:intergenic 45.0%
GTGACATGGCTCAGATTAGT+GGG - chr2.2:73220034-73220053 MS.gene047182:CDS 45.0%
GTGGTTAATAGTGTGGGTCA+TGG - chr2.2:73220598-73220617 MS.gene047182:intron 45.0%
GTTGAGAAGAAAATGCCGCT+TGG - chr2.2:73221238-73221257 MS.gene047182:CDS 45.0%
TCACTATCTGGATCCCATAG+TGG - chr2.2:73220657-73220676 MS.gene047182:intron 45.0%
TCCATGACTAGTATTCCCTC+CGG + chr2.2:73219788-73219807 None:intergenic 45.0%
TGATCAACCCTTACAGGTAG+CGG - chr2.2:73219417-73219436 MS.gene047182:CDS 45.0%
TGTGACATGGCTCAGATTAG+TGG - chr2.2:73220033-73220052 MS.gene047182:CDS 45.0%
TTACCTATCCTTACTCCTCC+AGG + chr2.2:73221659-73221678 None:intergenic 45.0%
TTGTGGTTCCATGAGCTGAA+GGG + chr2.2:73219176-73219195 None:intergenic 45.0%
TTTCGTGACTCGAGATCAAG+TGG + chr2.2:73219376-73219395 None:intergenic 45.0%
TTTGTGGTTCCATGAGCTGA+AGG + chr2.2:73219177-73219196 None:intergenic 45.0%
! AAAATGCCGCTTGGTAACTG+GGG - chr2.2:73221247-73221266 MS.gene047182:CDS 45.0%
! AGAAAATGCCGCTTGGTAAC+TGG - chr2.2:73221245-73221264 MS.gene047182:CDS 45.0%
! GAAAATGCCGCTTGGTAACT+GGG - chr2.2:73221246-73221265 MS.gene047182:CDS 45.0%
! GTTTTCCCATCATTGCAAGG+CGG - chr2.2:73221098-73221117 MS.gene047182:CDS 45.0%
! TGCAACACAGTTTGCTTTGC+CGG - chr2.2:73221962-73221981 MS.gene047182:CDS 45.0%
!! AGAAGTATCCCTCTCTTCCT+TGG + chr2.2:73221023-73221042 None:intergenic 45.0%
!! CATGACTTCAAGAGGGTGTT+TGG - chr2.2:73221785-73221804 MS.gene047182:CDS 45.0%
!! CGAAGGTACTTGAGAGCAAT+AGG - chr2.2:73221904-73221923 MS.gene047182:CDS 45.0%
!! GCTGTTTTCCCATCATTGCA+AGG - chr2.2:73221095-73221114 MS.gene047182:CDS 45.0%
!! TATGGTTTTCTGGTCCTTGC+AGG - chr2.2:73220893-73220912 MS.gene047182:intron 45.0%
AAGAGTCTTCGAGGTCCAAG+GGG - chr2.2:73220966-73220985 MS.gene047182:CDS 50.0%
AAGTGGACGATCACCTCGAT+CGG + chr2.2:73219359-73219378 None:intergenic 50.0%
ACAAGAGTCTTCGAGGTCCA+AGG - chr2.2:73220964-73220983 MS.gene047182:CDS 50.0%
ACACCCTCTTGAAGTCATGG+CGG + chr2.2:73221784-73221803 None:intergenic 50.0%
ACATTCTTGAGCTCCGGGTA+CGG - chr2.2:73221928-73221947 MS.gene047182:CDS 50.0%
AGTGGCCACTCCTGAGTATA+AGG - chr2.2:73221166-73221185 MS.gene047182:CDS 50.0%
ATGCCTGGTGCACGTTACTA+TGG - chr2.2:73219580-73219599 MS.gene047182:intron 50.0%
ATGGGGTTGGATACTCCTTC+CGG - chr2.2:73219766-73219785 MS.gene047182:CDS 50.0%
CAAAAGCTTCAACCCGTACC+CGG + chr2.2:73221944-73221963 None:intergenic 50.0%
CAAGAGTCTTCGAGGTCCAA+GGG - chr2.2:73220965-73220984 MS.gene047182:CDS 50.0%
CAATAGCAAGGGCGGCAATA+TGG + chr2.2:73221136-73221155 None:intergenic 50.0%
GGATTCTACGGAAGCTCTCT+TGG + chr2.2:73219338-73219357 None:intergenic 50.0%
GGGGGATAGAATTATGGGGT+TGG - chr2.2:73219753-73219772 MS.gene047182:CDS 50.0%
GTATACTGGATTGCTGTCGC+CGG - chr2.2:73219732-73219751 MS.gene047182:CDS 50.0%
TAGGGACATTCTTGAGCTCC+GGG - chr2.2:73221923-73221942 MS.gene047182:CDS 50.0%
TATACTGGATTGCTGTCGCC+GGG - chr2.2:73219733-73219752 MS.gene047182:CDS 50.0%
TCCGGAGGGAATACTAGTCA+TGG - chr2.2:73219784-73219803 MS.gene047182:CDS 50.0%
TCGCCGGGGGATAGAATTAT+GGG - chr2.2:73219748-73219767 MS.gene047182:CDS 50.0%
TGACTAGTATTCCCTCCGGA+AGG + chr2.2:73219784-73219803 None:intergenic 50.0%
TGTGGTTCCATGAGCTGAAG+GGG + chr2.2:73219175-73219194 None:intergenic 50.0%
TTCCATGAGCTGAAGGGGAA+CGG + chr2.2:73219170-73219189 None:intergenic 50.0%
! AAATGCCGCTTGGTAACTGG+GGG - chr2.2:73221248-73221267 MS.gene047182:CDS 50.0%
! GCAACACAGTTTGCTTTGCC+GGG - chr2.2:73221963-73221982 MS.gene047182:CDS 50.0%
! TTTGGGATTTAAGGCCCCTG+GGG - chr2.2:73221291-73221310 MS.gene047182:CDS 50.0%
!! ACTTTGGGATTTAAGGCCCC+TGG - chr2.2:73221289-73221308 MS.gene047182:CDS 50.0%
!! CTTTGGGATTTAAGGCCCCT+GGG - chr2.2:73221290-73221309 MS.gene047182:CDS 50.0%
!! GACTTCAAGAGGGTGTTTGG+AGG - chr2.2:73221788-73221807 MS.gene047182:CDS 50.0%
!! TAGTGGGCTAATTGCAGCCA+AGG - chr2.2:73220050-73220069 MS.gene047182:CDS 50.0%
AAAAGCCGCGGTTCGATCGT+GGG - chr2.2:73219393-73219412 MS.gene047182:CDS 55.0%
AACATGCTGCAGAGGGAGCA+TGG - chr2.2:73221861-73221880 MS.gene047182:CDS 55.0%
ACCCTCTTGAAGTCATGGCG+GGG + chr2.2:73221782-73221801 None:intergenic 55.0%
AGCAGGATCCGCTACCTGTA+AGG + chr2.2:73219428-73219447 None:intergenic 55.0%
AGGGTTCACACACTCCTGCA+AGG + chr2.2:73220910-73220929 None:intergenic 55.0%
ATACTGGATTGCTGTCGCCG+GGG - chr2.2:73219734-73219753 MS.gene047182:CDS 55.0%
ATGAGCTGAAGGGGAACGGT+GGG + chr2.2:73219166-73219185 None:intergenic 55.0%
CACCCTCTTGAAGTCATGGC+GGG + chr2.2:73221783-73221802 None:intergenic 55.0%
CATTCTTGAGCTCCGGGTAC+GGG - chr2.2:73221929-73221948 MS.gene047182:CDS 55.0%
CCACCATAGTAACGTGCACC+AGG + chr2.2:73219586-73219605 None:intergenic 55.0%
CCTGGTGCACGTTACTATGG+TGG - chr2.2:73219583-73219602 MS.gene047182:intron 55.0%
CGCCGGGGGATAGAATTATG+GGG - chr2.2:73219749-73219768 MS.gene047182:CDS 55.0%
CTGTACCCCCAGTTACCAAG+CGG + chr2.2:73221256-73221275 None:intergenic 55.0%
GAAGCTGGATTCGAGGTGGA+GGG + chr2.2:73219122-73219141 None:intergenic 55.0%
GAGGTCCGCCTTGCAATGAT+GGG + chr2.2:73221106-73221125 None:intergenic 55.0%
GCAGGATCCGCTACCTGTAA+GGG + chr2.2:73219427-73219446 None:intergenic 55.0%
GCTTCCGTAGAATCCGATCG+AGG - chr2.2:73219343-73219362 MS.gene047182:intron 55.0%
GGTTGGATACTCCTTCCGGA+GGG - chr2.2:73219770-73219789 MS.gene047182:CDS 55.0%
GTCGCCGGGGGATAGAATTA+TGG - chr2.2:73219747-73219766 MS.gene047182:CDS 55.0%
GTGGGGTGATCAACCCTTAC+AGG - chr2.2:73219411-73219430 MS.gene047182:CDS 55.0%
TCTCGAGTCACGAAAAGCCG+CGG - chr2.2:73219381-73219400 MS.gene047182:CDS 55.0%
TGAGGTCCGCCTTGCAATGA+TGG + chr2.2:73221107-73221126 None:intergenic 55.0%
! ACATGCTGCAGAGGGAGCAT+GGG - chr2.2:73221862-73221881 MS.gene047182:CDS 55.0%
! GGACAGGGTTTGATGGATCG+CGG + chr2.2:73219144-73219163 None:intergenic 55.0%
! GTTTGATGGATCGCGGAAGC+TGG + chr2.2:73219137-73219156 None:intergenic 55.0%
!! AGGGCTGTGATGGAAGCACT+TGG - chr2.2:73219526-73219545 MS.gene047182:intron 55.0%
!!! GGAGGCCGATTTTGAGACGA+TGG - chr2.2:73221806-73221825 MS.gene047182:CDS 55.0%
AAAGCCGCGGTTCGATCGTG+GGG - chr2.2:73219394-73219413 MS.gene047182:CDS 60.0%
ACCCCCGCCATGACTTCAAG+AGG - chr2.2:73221777-73221796 MS.gene047182:CDS 60.0%
ACGGTGGGGACAGGGTTTGA+TGG + chr2.2:73219151-73219170 None:intergenic 60.0%
AGTCGTCGGGAATCGGTGGA+CGG + chr2.2:73219093-73219112 None:intergenic 60.0%
AGTCTTCGAGGTCCAAGGGG+TGG - chr2.2:73220969-73220988 MS.gene047182:CDS 60.0%
ATCACCCCACGATCGAACCG+CGG + chr2.2:73219401-73219420 None:intergenic 60.0%
ATGGAGTCGTCGGGAATCGG+TGG + chr2.2:73219097-73219116 None:intergenic 60.0%
CACCGTTCCCCTTCAGCTCA+TGG - chr2.2:73219165-73219184 MS.gene047182:CDS 60.0%
CATGAGCTGAAGGGGAACGG+TGG + chr2.2:73219167-73219186 None:intergenic 60.0%
CCCCCGCCATGACTTCAAGA+GGG - chr2.2:73221778-73221797 MS.gene047182:CDS 60.0%
CCCTCTTGAAGTCATGGCGG+GGG + chr2.2:73221781-73221800 None:intergenic 60.0%
GAAAAGCCGCGGTTCGATCG+TGG - chr2.2:73219392-73219411 MS.gene047182:CDS 60.0%
GATCGCGGAAGCTGGATTCG+AGG + chr2.2:73219129-73219148 None:intergenic 60.0%
GCGATGGAGTCGTCGGGAAT+CGG + chr2.2:73219100-73219119 None:intergenic 60.0%
GCTTTGCTGCGAGCGTGCTT+TGG - chr2.2:73219633-73219652 MS.gene047182:intron 60.0%
GGAAGCTGGATTCGAGGTGG+AGG + chr2.2:73219123-73219142 None:intergenic 60.0%
GGGTTGGATACTCCTTCCGG+AGG - chr2.2:73219769-73219788 MS.gene047182:CDS 60.0%
TACTGGATTGCTGTCGCCGG+GGG - chr2.2:73219735-73219754 MS.gene047182:CDS 60.0%
TGAGCTGAAGGGGAACGGTG+GGG + chr2.2:73219165-73219184 None:intergenic 60.0%
TTAAGGCCCCTGGGGTTGAC+AGG - chr2.2:73221299-73221318 MS.gene047182:CDS 60.0%
!! AAGTCATGGCGGGGGTACCT+TGG + chr2.2:73221773-73221792 None:intergenic 60.0%
CGCGGAAGCTGGATTCGAGG+TGG + chr2.2:73219126-73219145 None:intergenic 65.0%
GAAGGGGAACGGTGGGGACA+GGG + chr2.2:73219159-73219178 None:intergenic 65.0%
GGATTCGAGGTGGAGGGCGA+TGG + chr2.2:73219116-73219135 None:intergenic 65.0%
GTGGAGGGCGATGGAGTCGT+CGG + chr2.2:73219107-73219126 None:intergenic 65.0%
TGAAGGGGAACGGTGGGGAC+AGG + chr2.2:73219160-73219179 None:intergenic 65.0%
TGGAGGGCGATGGAGTCGTC+GGG + chr2.2:73219106-73219125 None:intergenic 65.0%
TCGGGAATCGGTGGACGGCG+CGG + chr2.2:73219088-73219107 None:intergenic 70.0%
GGAATCGGTGGACGGCGCGG+AGG + chr2.2:73219085-73219104 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 73219022 73221998 73219022 ID=MS.gene047182
chr2.2 mRNA 73219022 73221998 73219022 ID=MS.gene047182.t1;Parent=MS.gene047182
chr2.2 exon 73220949 73221998 73220949 ID=MS.gene047182.t1.exon1;Parent=MS.gene047182.t1
chr2.2 CDS 73220949 73221998 73220949 ID=cds.MS.gene047182.t1;Parent=MS.gene047182.t1
chr2.2 exon 73219700 73220105 73219700 ID=MS.gene047182.t1.exon2;Parent=MS.gene047182.t1
chr2.2 CDS 73219700 73220105 73219700 ID=cds.MS.gene047182.t1;Parent=MS.gene047182.t1
chr2.2 exon 73219346 73219447 73219346 ID=MS.gene047182.t1.exon3;Parent=MS.gene047182.t1
chr2.2 CDS 73219346 73219447 73219346 ID=cds.MS.gene047182.t1;Parent=MS.gene047182.t1
chr2.2 exon 73219022 73219245 73219022 ID=MS.gene047182.t1.exon4;Parent=MS.gene047182.t1
chr2.2 CDS 73219022 73219245 73219022 ID=cds.MS.gene047182.t1;Parent=MS.gene047182.t1
Gene Sequence

>MS.gene047182

ATGGATCTATCACACCATCAATCCAATCTATCTCTCAATTTCTCATCTTCTCACGCTTCTCCTCCGCGCCGTCCACCGATTCCCGACGACTCCATCGCCCTCCACCTCGAATCCAGCTTCCGCGATCCATCAAACCCTGTCCCCACCGTTCCCCTTCAGCTCATGGAACCACAAACAGAGAAAGAAAACGGTAACGCTATCGATATCGAATCCAACAACGATGAAGATGATAGAGAAGTTGAAGAATTTCGTATTCTAGGTCATTCAATGTGTATCAAAAGACGAAGAGATTCCGAATCCTCTACAATCACAACCAAGAGAGCTTCCGTAGAATCCGATCGAGGTGATCGTCCACTTGATCTCGAGTCACGAAAAGCCGCGGTTCGATCGTGGGGTGATCAACCCTTACAGGTAGCGGATCCTGCTATATACGAGATTATAGAAAAAGAGAAAAAGCGTCAATTCAAAGGGATTGAATTGATAGCTTCTGAGAATTTTGTTTGTAGGGCTGTGATGGAAGCACTTGGAAGCCATTTAACGAATAAATACTCTGAAGGAATGCCTGGTGCACGTTACTATGGTGGAAATCAATATATAGATGAAATTGAAACGCTTTGCTGCGAGCGTGCTTTGGCTGCGTTTAATCTTGATCCTAAGTGTTGGGGTGTGAATGTGCAGCCATATTCCTGTACTTCGGCTAATTTTGCTGTGTATACTGGATTGCTGTCGCCGGGGGATAGAATTATGGGGTTGGATACTCCTTCCGGAGGGAATACTAGTCATGGATATTATACTCCGAATGGGAAGAAAGTTTCTGGGGCTTCAATATTCTTTGAGAGTTTAGCTTATAAGATTAATCCTCAATCGGGTTTTATTGATTATGATAAGCTTGAAGAAAGGGCACTTGATTTTCGTCCTAAGATACTTATTTGTGGTGGGAGTTCTTATCCTCGAGAATGGGATTATGCTAAGTTTAGACATGTTGCAGATAAATGTGGAGCTGTGTTATTGTGTGACATGGCTCAGATTAGTGGGCTAATTGCAGCCAAGGTGTGAAACATTTTCCTTACAATATTTGTGGAGTTAGAATTTCTTACTGTTTCTAGTTAACTTTGAAAGTTTAGTAGGGCTTGTGTCGGTGTTCCTTCATTGTTGTTATTGATTGCACTTAGTCAACGAGTTGGGCAATTATAGGATTTTTTTTATTATTACGATATGATATGATTCTTTACCATTCCATCCTAAGCAACAAAGTTCATCTATGACTTAGCACATATTTTGAATTAGTCCCTAAAATTGAATTTTATCGATCACATTTGTAGTAGGCCTTTTCGATCCGTCAATTTAGTCCTTGAAATTGTTCTTTAGGGACAATGTAATCGAGAATTTTTTAAATTATGGGACCATTTTATAATTTCGTTAACTTCAAAGACTAAATTGTCAACACCATACAATTTCCAGAACTATATTGGTGATTCATTCTTTTTAAAATTCACACCTGTTTAATCTTTTATGTTTTACCAATACACATGCTGATATAGATTTCAGTTTGACTTAATGGCAGAGTCCCTTTATTGTGGTTAATAGTGTGGGTCATGGACTATGAGAATTCTGCTTAGTGTCAGAGACTCGATATCACTATCTGGATCCCATAGTGGTCTACTAGTTTTAATAAAATTTTCTGCTAATCTGAATACTGTTTTGTCCATATTGACTTTAATGCCTTATACACTTTCAAGTTAATCCTAGTTGGTCATTTTCTGTAATTTCTGGATGGGTGGTTTAAGTCCATTATTGCCCTTTGCACAAATATCTAATAAATTGTGTACTTTTAATATGAAGATATAGATACTTGTTGTTTTCTTTAACAGTATGGTTTTCTGGTCCTTGCAGGAGTGTGTGAACCCTTTTGATTATTGTGATGTTGTTACATCGACAACTCACAAGAGTCTTCGAGGTCCAAGGGGTGGTATAATTTTTTATCGGAAGGGAACAAAACCAAGGAAGAGAGGGATACTTCTTACTCAGGGACATGAAAGTGATCAATATGACTTTGAAGAAAAGATAAACTTTGCTGTTTTCCCATCATTGCAAGGCGGACCTCATAATAACCATATTGCCGCCCTTGCTATTGCATTAAAACAAGTGGCCACTCCTGAGTATAAGGCATACATGCAGCAGGTGAAGAAGAATGCTCAAGCTTTAGCATCTGCTCTGTTGAGAAGAAAATGCCGCTTGGTAACTGGGGGTACAGACAACCATTTATTACTTTGGGATTTAAGGCCCCTGGGGTTGACAGGTATTATATGATCGTGTGATATTTTGACTATATAAGTCCGATTGCATCTTTGTTTGTTAAGCGCTAATATGTCAACTAGACTCATTTAGGTCGCATGTTTTCTGCACTTTGCATTGACTTTGGGTTTGATAGCTACTTTTGTGATCACAAATTATGCTGTAATCATATGGTTCAAGCTGGACCATTAGTGACATTTCGTTCTTATGTTTTTGTATACGGTAACAACAATACCTTATTTTTTTTGGTGTGCAGGTAAATTTTACGAGAAGGTCTGTGAGGCATGTCATATTACTTTGAATAAAATTGCTATTTTTGGTGACAATGGAATTATAATTCCTGGAGGAGTAAGGATAGGTAAGCAATAATTTTATATGCTTGAATCTTTATGTTTTGTATGCTCAAGATATTCGATTGACAGTGCATTCTTATGAGATTTTTATGTTGTATCACCAAGGTACCCCCGCCATGACTTCAAGAGGGTGTTTGGAGGCCGATTTTGAGACGATGGCTGATTTTCTCTTTAGAGCTGCACAAATTGCAAACATGCTGCAGAGGGAGCATGGGAAATTGCAGAAGACTATTTCGAAGGTACTTGAGAGCAATAGGGACATTCTTGAGCTCCGGGTACGGGTTGAAGCTTTTGCAACACAGTTTGCTTTGCCGGGTTTTGACATTTGA
Protein sequence

>MS.gene047182.t1

MDLSHHQSNLSLNFSSSHASPPRRPPIPDDSIALHLESSFRDPSNPVPTVPLQLMEPQTEKENGNAIDIESNNDEDDREVEEFRILGHSMCIKRRRDSESSTITTKRASVESDRGDRPLDLESRKAAVRSWGDQPLQVADPAIYEIIEKEKKRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGMPGARYYGGNQYIDEIETLCCERALAAFNLDPKCWGVNVQPYSCTSANFAVYTGLLSPGDRIMGLDTPSGGNTSHGYYTPNGKKVSGASIFFESLAYKINPQSGFIDYDKLEERALDFRPKILICGGSSYPREWDYAKFRHVADKCGAVLLCDMAQISGLIAAKECVNPFDYCDVVTSTTHKSLRGPRGGIIFYRKGTKPRKRGILLTQGHESDQYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALASALLRRKCRLVTGGTDNHLLLWDLRPLGLTGKFYEKVCEACHITLNKIAIFGDNGIIIPGGVRIGTPAMTSRGCLEADFETMADFLFRAAQIANMLQREHGKLQKTISKVLESNRDILELRVRVEAFATQFALPGFDI