AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene002745

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene002745.t1 MTR_2g019640 96.311 515 19 0 3 517 1 515 0.0 1032
MS.gene002745.t1 MTR_6g034940 25.106 470 301 16 15 463 5 444 1.34e-28 119
MS.gene002745.t1 MTR_2g031920 24.510 510 327 19 22 504 11 489 2.32e-26 112
MS.gene002745.t1 MTR_5g025610 24.950 497 313 19 21 499 6 460 3.67e-26 111
MS.gene002745.t1 MTR_5g025610 25.322 466 290 18 21 468 6 431 1.03e-25 110
MS.gene002745.t1 MTR_2g031930 24.689 482 314 19 39 504 41 489 3.74e-25 108
MS.gene002745.t1 MTR_0045s0070 25.773 485 298 16 37 501 34 476 2.22e-23 103
MS.gene002745.t1 MTR_8g089800 22.669 472 324 16 38 495 38 482 5.21e-23 102
MS.gene002745.t1 MTR_3g467130 24.153 443 273 15 38 455 28 432 1.50e-22 100
MS.gene002745.t1 MTR_8g072260 22.970 505 306 15 25 502 17 465 2.98e-22 100
MS.gene002745.t1 MTR_3g467140 23.214 504 341 17 18 504 5 479 3.11e-22 100
MS.gene002745.t1 MTR_8g072260 23.567 471 279 14 25 468 17 433 4.63e-22 99.4
MS.gene002745.t1 MTR_2g031930 24.887 442 290 16 39 466 37 450 4.69e-22 99.4
MS.gene002745.t1 MTR_0045s0060 23.156 488 297 18 42 501 39 476 1.69e-21 97.8
MS.gene002745.t1 MTR_0045s0060 24.051 395 249 14 120 501 38 394 1.85e-21 96.7
MS.gene002745.t1 MTR_0045s0070 25.951 447 271 15 37 463 34 440 3.92e-21 96.3
MS.gene002745.t1 MTR_5g014250 23.013 478 322 15 34 495 36 483 6.54e-21 96.3
MS.gene002745.t1 MTR_1g019410 24.756 513 312 20 18 505 5 468 8.56e-21 95.9
MS.gene002745.t1 MTR_4g086040 25.959 443 275 17 40 467 35 439 1.43e-20 95.1
MS.gene002745.t1 MTR_4g095050 26.493 268 165 10 221 479 232 476 1.95e-20 94.7
MS.gene002745.t1 MTR_6g015910 22.245 481 320 16 21 489 13 451 1.31e-19 92.0
MS.gene002745.t1 MTR_4g086130 24.661 442 282 16 40 467 32 436 1.69e-19 91.7
MS.gene002745.t1 MTR_5g010750 23.182 440 283 17 43 463 31 434 2.29e-19 90.9
MS.gene002745.t1 MTR_5g010750 23.182 440 283 17 43 463 31 434 3.77e-19 90.5
MS.gene002745.t1 MTR_8g076940 23.762 505 310 23 20 491 17 479 4.58e-19 90.5
MS.gene002745.t1 MTR_2g437840 26.429 280 171 13 228 497 235 489 4.96e-19 90.5
MS.gene002745.t1 MTR_3g007320 22.667 450 307 14 21 463 13 428 6.39e-19 89.7
MS.gene002745.t1 MTR_5g091760 25.855 468 290 18 18 461 5 439 6.65e-19 89.7
MS.gene002745.t1 MTR_7g016040 22.874 494 324 20 20 500 12 461 1.84e-18 88.6
MS.gene002745.t1 MTR_8g072260 23.832 428 250 13 25 425 17 395 1.90e-18 88.2
MS.gene002745.t1 MTR_5g014240 23.950 476 319 14 34 495 36 482 1.52e-17 85.9
MS.gene002745.t1 MTR_3g112120 22.634 486 316 16 19 478 10 461 1.52e-17 85.9
MS.gene002745.t1 MTR_4g102280 27.419 248 167 8 228 472 240 477 2.21e-17 85.5
MS.gene002745.t1 MTR_8g006495 31.548 168 107 5 295 455 158 324 2.39e-17 84.3
MS.gene002745.t1 MTR_0045s0080 25.559 313 197 9 120 426 120 402 4.88e-17 83.6
MS.gene002745.t1 MTR_4g094775 26.316 228 146 7 257 481 260 468 7.38e-17 83.6
MS.gene002745.t1 MTR_0059s0170 29.612 206 135 5 296 494 292 494 8.93e-17 83.6
MS.gene002745.t1 MTR_5g016440 26.697 221 147 6 274 491 267 475 9.46e-17 83.2
MS.gene002745.t1 MTR_8g006450 31.548 168 107 5 295 455 271 437 1.06e-16 83.2
MS.gene002745.t1 MTR_4g102310 25.806 248 170 7 228 472 235 471 1.45e-15 79.7
MS.gene002745.t1 MTR_3g467140 26.384 307 196 10 208 504 60 346 1.97e-15 78.2
MS.gene002745.t1 MTR_1g111240 32.948 173 103 6 310 473 337 505 3.78e-15 78.6
MS.gene002745.t1 MTR_1g032950 20.482 498 334 20 17 495 13 467 1.34e-14 76.6
MS.gene002745.t1 MTR_7g033040 22.863 468 309 15 14 461 4 439 1.39e-14 76.6
MS.gene002745.t1 MTR_3g058060 26.794 209 137 6 296 494 294 496 2.25e-14 76.3
MS.gene002745.t1 MTR_0171s0010 26.244 221 152 7 257 473 264 477 2.78e-14 75.9
MS.gene002745.t1 MTR_3g058220 25.962 208 144 5 294 494 289 493 3.01e-14 75.5
MS.gene002745.t1 MTR_6g022450 26.549 226 148 7 263 473 257 479 4.38e-14 75.1
MS.gene002745.t1 MTR_7g079440 27.717 184 121 5 296 473 442 619 4.86e-14 75.5
MS.gene002745.t1 MTR_4g077210 29.341 167 111 5 292 455 289 451 5.09e-14 74.7
MS.gene002745.t1 MTR_7g012860 28.022 182 122 5 296 473 291 467 5.90e-14 74.7
MS.gene002745.t1 MTR_0287s0060 28.022 182 122 5 296 473 291 467 5.90e-14 74.7
MS.gene002745.t1 MTR_7g006900 30.964 197 122 7 307 499 283 469 6.02e-14 74.3
MS.gene002745.t1 MTR_6g017325 29.082 196 127 5 307 499 318 504 9.44e-14 73.9
MS.gene002745.t1 MTR_8g012585 22.957 257 166 6 263 494 191 440 1.17e-13 73.6
MS.gene002745.t1 MTR_1g035140 25.556 180 129 3 296 473 291 467 1.85e-13 73.2
MS.gene002745.t1 MTR_4g104610 31.138 167 107 5 300 461 295 458 1.90e-13 73.2
MS.gene002745.t1 MTR_5g095220 28.235 170 117 3 306 473 271 437 2.16e-13 72.8
MS.gene002745.t1 MTR_2g072310 25.292 257 163 9 230 473 83 323 2.20e-13 72.0
MS.gene002745.t1 MTR_4g062500 27.368 190 129 4 296 479 299 485 2.31e-13 72.8
MS.gene002745.t1 MTR_4g088160 24.153 236 155 6 276 502 274 494 2.68e-13 72.8
MS.gene002745.t1 MTR_5g095290 27.811 169 117 3 307 473 302 467 3.25e-13 72.4
MS.gene002745.t1 MTR_5g021220 22.024 504 328 20 20 489 4 476 3.74e-13 72.0
MS.gene002745.t1 MTR_8g042060 25.442 283 182 11 232 501 221 487 3.84e-13 72.0
MS.gene002745.t1 MTR_4g104640 22.388 201 146 5 276 473 291 484 4.42e-13 72.0
MS.gene002745.t1 MTR_5g009110 26.522 230 136 6 304 503 197 423 4.55e-13 71.6
MS.gene002745.t1 MTR_5g009110 26.522 230 136 6 304 503 345 571 4.71e-13 72.0
MS.gene002745.t1 MTR_8g036185 25.789 190 126 5 296 473 299 485 5.17e-13 71.6
MS.gene002745.t1 MTR_8g042060 26.070 257 163 9 257 501 282 523 7.09e-13 71.2
MS.gene002745.t1 MTR_5g007450 28.796 191 124 5 299 483 290 474 8.61e-13 70.9
MS.gene002745.t1 MTR_4g104540 31.138 167 107 5 300 461 225 388 1.08e-12 70.5
MS.gene002745.t1 MTR_5g082520 21.830 481 322 16 39 503 24 466 1.13e-12 70.5
MS.gene002745.t1 MTR_4g104660 24.873 197 142 4 296 489 303 496 1.42e-12 70.5
MS.gene002745.t1 MTR_2g065360 26.257 179 126 4 298 473 264 439 1.53e-12 70.1
MS.gene002745.t1 MTR_4g088195 24.155 207 141 5 276 473 274 473 1.54e-12 70.1
MS.gene002745.t1 MTR_5g018980 25.888 197 130 5 276 466 280 466 1.61e-12 70.1
MS.gene002745.t1 MTR_3g093530 28.235 170 115 3 306 472 330 495 1.87e-12 70.1
MS.gene002745.t1 MTR_0638s0020 25.140 179 128 4 298 473 221 396 2.10e-12 69.3
MS.gene002745.t1 MTR_8g012590 25.000 252 171 8 228 473 229 468 2.40e-12 69.7
MS.gene002745.t1 MTR_8g091680 26.667 180 122 6 299 473 244 418 2.46e-12 69.3
MS.gene002745.t1 MTR_3g057980 23.858 197 144 4 280 473 270 463 2.97e-12 69.3
MS.gene002745.t1 MTR_4g026030 28.824 170 111 6 300 464 138 302 3.21e-12 68.2
MS.gene002745.t1 MTR_4g062510 24.737 190 134 4 296 479 303 489 4.39e-12 68.9
MS.gene002745.t1 MTR_8g042020 26.733 202 132 6 307 501 330 522 4.40e-12 68.9
MS.gene002745.t1 MTR_7g012330 27.848 158 107 3 296 451 292 444 4.75e-12 68.6
MS.gene002745.t1 MTR_3g058000 25.112 223 152 6 254 473 262 472 5.20e-12 68.6
MS.gene002745.t1 MTR_8g076290 26.570 207 133 8 257 453 255 452 7.14e-12 68.2
MS.gene002745.t1 MTR_6g008530 26.733 202 139 6 275 471 297 494 7.69e-12 68.2
MS.gene002745.t1 MTR_3g076560 25.414 181 129 4 296 473 305 482 7.70e-12 68.2
MS.gene002745.t1 MTR_4g026050 23.722 489 317 18 14 473 2 463 7.73e-12 67.8
MS.gene002745.t1 MTR_1g102220 26.512 215 124 7 284 473 272 477 8.56e-12 67.8
MS.gene002745.t1 MTR_8g063280 26.230 183 128 4 297 473 286 467 9.42e-12 67.8
MS.gene002745.t1 MTR_5g007460 28.796 191 124 5 299 483 269 453 9.74e-12 67.4
MS.gene002745.t1 MTR_5g018990 25.989 177 119 6 296 466 294 464 1.06e-11 67.4
MS.gene002745.t1 MTR_3g070380 22.981 483 306 16 43 502 29 468 1.24e-11 67.4
MS.gene002745.t1 MTR_4g026080 27.059 170 118 4 307 473 1 167 1.35e-11 64.3
MS.gene002745.t1 MTR_5g019010 25.989 177 119 6 296 466 293 463 1.88e-11 66.6
MS.gene002745.t1 MTR_8g469300 23.846 260 182 10 228 481 233 482 1.88e-11 66.6
MS.gene002745.t1 MTR_7g016040 23.324 373 239 16 20 383 12 346 3.35e-11 65.5
MS.gene002745.t1 MTR_8g042000 25.172 290 194 10 220 501 249 523 5.33e-11 65.5
MS.gene002745.t1 MTR_4g089030 27.749 191 126 6 276 461 291 474 5.99e-11 65.1
MS.gene002745.t1 MTR_8g076510 20.652 460 303 20 51 489 47 465 6.95e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene002745.t1 AT2G34500 68.813 497 146 2 14 510 8 495 0.0 717
MS.gene002745.t1 AT2G34490 64.718 496 169 3 14 508 8 498 0.0 669
MS.gene002745.t1 AT2G28850 60.757 502 186 4 8 507 1 493 0.0 615
MS.gene002745.t1 AT2G28860 59.363 502 193 4 8 507 1 493 0.0 610
MS.gene002745.t1 AT2G32440 24.625 467 316 15 39 495 40 480 5.50e-28 117
MS.gene002745.t1 AT2G32440 24.625 467 316 15 39 495 40 480 5.50e-28 117
MS.gene002745.t1 AT3G19270 23.684 494 316 15 17 493 8 457 2.69e-24 106
MS.gene002745.t1 AT4G19230 23.137 510 336 16 1 502 1 462 5.50e-24 105
MS.gene002745.t1 AT1G05160 24.510 510 333 18 7 500 15 488 7.01e-24 105
MS.gene002745.t1 AT1G05160 24.510 510 333 18 7 500 15 488 7.01e-24 105
MS.gene002745.t1 AT5G45340 23.366 505 326 16 14 502 3 462 1.21e-23 104
MS.gene002745.t1 AT2G29090 24.364 472 305 15 34 492 40 472 1.41e-23 104
MS.gene002745.t1 AT2G29090 24.364 472 305 15 34 492 40 472 1.41e-23 104
MS.gene002745.t1 AT3G19270 23.667 469 299 14 17 468 8 434 1.54e-22 100
MS.gene002745.t1 AT4G19230 23.564 505 327 17 1 495 1 456 1.64e-22 100
MS.gene002745.t1 AT5G45340 23.602 483 307 16 14 477 3 442 2.18e-22 100
MS.gene002745.t1 AT3G30180 22.336 488 326 19 17 492 10 456 9.47e-21 95.5
MS.gene002745.t1 AT2G29090 24.806 387 247 11 116 492 25 377 1.43e-19 91.3
MS.gene002745.t1 AT5G14400 25.858 437 243 16 51 461 4 385 3.59e-19 90.1
MS.gene002745.t1 AT5G14400 25.858 437 243 16 51 461 4 385 5.06e-19 89.7
MS.gene002745.t1 AT5G14400 25.926 378 209 14 100 461 9 331 2.73e-18 87.0
MS.gene002745.t1 AT1G12740 23.148 432 293 14 43 463 31 434 9.74e-18 86.3
MS.gene002745.t1 AT1G12740 23.059 438 292 14 43 463 31 440 1.29e-17 85.9
MS.gene002745.t1 AT1G12740 23.991 446 287 16 27 463 38 440 2.01e-17 85.5
MS.gene002745.t1 AT3G28740 26.126 222 136 8 270 474 257 467 2.03e-17 85.5
MS.gene002745.t1 AT1G19630 22.930 471 317 14 22 474 6 448 3.30e-17 84.7
MS.gene002745.t1 AT4G37410 29.947 187 122 6 292 474 279 460 1.62e-16 82.8
MS.gene002745.t1 AT4G37340 26.160 237 142 9 276 491 257 481 4.38e-16 81.3
MS.gene002745.t1 AT1G11680 31.548 168 107 5 295 455 273 439 4.94e-16 81.3
MS.gene002745.t1 AT5G38970 22.634 486 305 20 28 492 21 456 9.33e-16 80.1
MS.gene002745.t1 AT3G30290 25.071 351 230 12 120 463 41 365 2.19e-15 78.6
MS.gene002745.t1 AT5G36220 27.273 187 119 6 294 474 144 319 3.31e-15 77.4
MS.gene002745.t1 AT5G36220 27.273 187 119 6 294 474 290 465 6.78e-15 77.8
MS.gene002745.t1 AT5G10600 27.461 193 132 5 292 481 297 484 9.26e-15 77.4
MS.gene002745.t1 AT4G15330 30.601 183 119 5 296 473 265 444 1.02e-14 77.0
MS.gene002745.t1 AT4G15330 30.601 183 119 5 296 473 293 472 1.18e-14 77.0
MS.gene002745.t1 AT4G15350 26.738 187 123 6 296 473 291 472 1.49e-14 76.6
MS.gene002745.t1 AT4G37320 22.790 509 320 25 22 491 6 480 1.71e-14 76.3
MS.gene002745.t1 AT2G42250 27.273 187 125 4 296 473 296 480 2.69e-14 75.9
MS.gene002745.t1 AT4G13770 22.912 467 287 20 26 453 14 446 5.14e-14 74.7
MS.gene002745.t1 AT5G57220 25.114 219 140 6 279 481 251 461 6.93e-14 74.3
MS.gene002745.t1 AT1G74550 27.326 172 119 4 296 464 272 440 1.37e-13 73.6
MS.gene002745.t1 AT5G38970 25.342 292 182 11 210 492 111 375 1.41e-13 72.8
MS.gene002745.t1 AT5G38970 25.342 292 182 11 210 492 111 375 1.41e-13 72.8
MS.gene002745.t1 AT1G66540 25.397 189 130 5 289 474 107 287 1.45e-13 72.4
MS.gene002745.t1 AT5G06905 25.946 185 119 5 296 464 287 469 1.71e-13 73.2
MS.gene002745.t1 AT5G24900 25.150 167 118 3 309 472 219 381 2.23e-13 72.4
MS.gene002745.t1 AT5G35715 27.811 169 117 4 296 461 225 391 2.77e-13 72.4
MS.gene002745.t1 AT1G66540 25.500 200 132 6 289 479 166 357 2.98e-13 72.0
MS.gene002745.t1 AT3G20940 25.112 223 150 5 257 473 268 479 3.73e-13 72.4
MS.gene002745.t1 AT5G24900 25.150 167 118 3 309 472 336 498 4.51e-13 72.0
MS.gene002745.t1 AT2G23220 24.180 244 155 8 236 476 258 474 5.60e-13 71.6
MS.gene002745.t1 AT3G14630 24.498 249 169 7 230 473 246 480 5.61e-13 71.6
MS.gene002745.t1 AT4G13310 30.719 153 97 5 304 451 294 442 6.46e-13 71.2
MS.gene002745.t1 AT3G14630 24.498 249 169 7 230 473 301 535 6.47e-13 71.6
MS.gene002745.t1 AT5G38450 32.653 196 122 6 307 499 325 513 6.54e-13 71.6
MS.gene002745.t1 AT3G20935 27.841 176 119 4 304 473 131 304 8.29e-13 70.1
MS.gene002745.t1 AT1G24540 25.600 250 168 7 227 464 240 483 8.82e-13 71.2
MS.gene002745.t1 AT3G20080 29.012 162 107 3 300 455 165 324 9.94e-13 70.1
MS.gene002745.t1 AT3G20080 29.012 162 107 3 300 455 165 324 9.94e-13 70.1
MS.gene002745.t1 AT3G20080 29.012 162 107 3 300 455 165 324 9.94e-13 70.1
MS.gene002745.t1 AT3G20080 29.012 162 107 3 300 455 165 324 9.94e-13 70.1
MS.gene002745.t1 AT4G36220 29.310 174 113 5 296 464 305 473 1.33e-12 70.5
MS.gene002745.t1 AT3G20080 29.012 162 107 3 300 455 302 461 1.92e-12 70.1
MS.gene002745.t1 AT3G20080 29.012 162 107 3 300 455 302 461 1.92e-12 70.1
MS.gene002745.t1 AT4G22710 29.775 178 117 6 300 473 314 487 2.09e-12 69.7
MS.gene002745.t1 AT4G22690 29.444 180 119 6 298 473 343 518 2.24e-12 69.7
MS.gene002745.t1 AT3G20090 23.887 247 167 6 235 473 246 479 2.75e-12 69.3
MS.gene002745.t1 AT1G73340 20.571 525 344 18 8 508 11 486 2.77e-12 69.3
MS.gene002745.t1 AT3G20090 23.887 247 167 6 235 473 108 341 2.86e-12 68.9
MS.gene002745.t1 AT1G64930 30.939 181 117 7 299 473 300 478 3.22e-12 69.3
MS.gene002745.t1 AT2G29090 22.006 309 207 9 34 336 40 320 3.34e-12 68.2
MS.gene002745.t1 AT5G10610 25.907 193 135 5 292 481 281 468 5.11e-12 68.6
MS.gene002745.t1 AT1G64940 33.333 171 106 7 299 464 302 469 5.28e-12 68.6
MS.gene002745.t1 AT1G19630 22.197 446 303 14 22 449 6 425 6.08e-12 68.2
MS.gene002745.t1 AT4G15300 23.529 357 228 13 120 463 111 435 6.27e-12 68.2
MS.gene002745.t1 AT3G20950 23.333 240 165 6 241 473 255 482 6.42e-12 68.2
MS.gene002745.t1 AT4G15300 23.529 357 228 13 120 463 101 425 6.79e-12 68.2
MS.gene002745.t1 AT1G13090 25.373 201 141 6 258 456 254 447 7.42e-12 68.2
MS.gene002745.t1 AT1G50520 24.299 214 146 6 261 467 269 473 7.68e-12 68.2
MS.gene002745.t1 AT3G20130 26.486 185 126 5 296 473 269 450 8.12e-12 67.8
MS.gene002745.t1 AT3G20130 26.486 185 126 5 296 473 297 478 9.01e-12 67.8
MS.gene002745.t1 AT4G15110 24.783 230 140 5 304 503 353 579 9.43e-12 67.8
MS.gene002745.t1 AT5G24910 25.150 167 118 3 309 472 341 503 1.38e-11 67.4
MS.gene002745.t1 AT3G20110 23.967 242 163 5 257 490 264 492 1.47e-11 67.0
MS.gene002745.t1 AT4G15396 23.433 367 236 13 111 463 101 436 1.49e-11 67.0
MS.gene002745.t1 AT5G25120 24.038 312 208 10 172 466 156 455 1.63e-11 67.0
MS.gene002745.t1 AT4G15396 23.433 367 236 13 111 463 101 436 1.64e-11 67.0
MS.gene002745.t1 AT2G23190 24.790 238 140 9 261 476 283 503 1.78e-11 67.0
MS.gene002745.t1 AT5G38970 22.378 429 269 17 17 425 10 394 1.91e-11 66.6
MS.gene002745.t1 AT1G55940 24.062 453 299 22 38 472 40 465 2.05e-11 66.6
MS.gene002745.t1 AT3G48270 27.083 192 127 6 276 461 261 445 2.22e-11 66.6
MS.gene002745.t1 AT5G67310 26.786 224 152 6 292 513 293 506 2.46e-11 66.6
MS.gene002745.t1 AT3G10570 25.824 182 122 6 289 464 298 472 2.60e-11 66.2
MS.gene002745.t1 AT3G48290 29.167 192 123 6 276 461 263 447 2.89e-11 66.2
MS.gene002745.t1 AT5G04660 26.738 187 124 7 285 464 291 471 5.23e-11 65.5
MS.gene002745.t1 AT3G48300 27.976 168 112 5 300 461 279 443 6.04e-11 65.1
MS.gene002745.t1 AT3G48300 27.976 168 112 5 300 461 281 445 6.06e-11 65.1
MS.gene002745.t1 AT2G22330 20.582 481 342 17 1 451 11 481 8.17e-11 65.1
MS.gene002745.t1 AT2G22330 20.582 481 342 17 1 451 34 504 8.59e-11 64.7

Find 149 sgRNAs with CRISPR-Local

Find 168 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTTGTCTCATTGATTTC+TGG 0.072609 2.1:+67519217 MS.gene002745:CDS
CAAATCTCTCTCGGGCTTTC+AGG 0.177380 2.1:-67519035 None:intergenic
CGTCGACTTCGTCGCTTCTT+TGG 0.185585 2.1:+67519361 MS.gene002745:CDS
GAAGCTTCCGTTTGACTTTC+CGG 0.201330 2.1:+67519092 MS.gene002745:CDS
ACTTTCTCGTGATATGAATT+TGG 0.222895 2.1:+67518975 MS.gene002745:CDS
AAAAGAAACTTTCTAGCATT+TGG 0.244128 2.1:+67519726 MS.gene002745:CDS
ACAAGGTTTCCTTCATTTAC+TGG 0.244219 2.1:+67519930 MS.gene002745:CDS
TCTTTGGGCGGTGGCATTGC+TGG 0.247238 2.1:+67519377 MS.gene002745:CDS
ATATTAGGTATGGGATTAAT+TGG 0.255903 2.1:-67518465 None:intergenic
CATCTTGTGGGCCATCCTTT+TGG 0.257964 2.1:+67518751 MS.gene002745:CDS
TTCGTGACCCAACAAAATTT+TGG 0.271500 2.1:+67518599 MS.gene002745:CDS
GGAAAAGGATAAAGCATATT+AGG 0.286042 2.1:-67518480 None:intergenic
CTTTCTTCTGAAAACCGGTC+TGG 0.291774 2.1:-67519684 None:intergenic
GTCGACTTCGTCGCTTCTTT+GGG 0.319856 2.1:+67519362 MS.gene002745:CDS
AAGCTTCCGTTTGACTTTCC+GGG 0.333180 2.1:+67519093 MS.gene002745:CDS
CTCACTCTGGCGAGAACCTC+TGG 0.336155 2.1:-67519408 None:intergenic
CGACTCCGGCGTCCAGATTC+CGG 0.337286 2.1:-67519442 None:intergenic
TCTTTGGTTCTCCCCTTCAT+AGG 0.337717 2.1:+67518559 MS.gene002745:CDS
GGGAAGAAGTTGCCGGAATC+TGG 0.339302 2.1:+67519430 MS.gene002745:CDS
AGGGAAAACTATTGCACCTT+TGG 0.356566 2.1:-67519610 None:intergenic
TCCTCAAACATCTTAAATCA+TGG 0.362523 2.1:+67518905 MS.gene002745:CDS
GAGTCGGTCAACGGCGAGTC+TGG 0.362607 2.1:-67519133 None:intergenic
TCCTTCATTTACTGGGGTTG+TGG 0.363193 2.1:+67519938 MS.gene002745:CDS
CAAGGTTTCCTTCATTTACT+GGG 0.364470 2.1:+67519931 MS.gene002745:CDS
TGTACAACCCGCTAGGGTTC+CGG 0.366222 2.1:-67519157 None:intergenic
TTCCATCCCAGGCCCATCTT+TGG 0.375272 2.1:+67518543 MS.gene002745:CDS
AAAACCCTACAATCATCTTT+AGG 0.377601 2.1:-67519891 None:intergenic
CTTGTCTTTCTTCTGAAAAC+CGG 0.383703 2.1:-67519689 None:intergenic
GGCAGAGCCGTTTCCGTTGA+CGG 0.391585 2.1:+67519572 MS.gene002745:CDS
GGGAAAACTATTGCACCTTT+GGG 0.392533 2.1:-67519609 None:intergenic
TGATAACATCGGAGCAGTTA+AGG 0.396633 2.1:+67519472 MS.gene002745:CDS
TTTGTCCTAAAGATGATTGT+AGG 0.396653 2.1:+67519886 MS.gene002745:CDS
TTTCTTCTGAAAACCGGTCT+GGG 0.399083 2.1:-67519683 None:intergenic
CGGGCTTTCAGGCCCAAATA+AGG 0.400260 2.1:-67519024 None:intergenic
TTCTCCACCAACGCTGAAAT+CGG 0.405544 2.1:+67519300 MS.gene002745:CDS
AACTTTCTAGCATTTGGAGC+TGG 0.407002 2.1:+67519732 MS.gene002745:CDS
GCATTACGGAACGCAGTTCC+CGG 0.407646 2.1:-67519111 None:intergenic
AGGATAAAGCATATTAGGTA+TGG 0.415430 2.1:-67518475 None:intergenic
CCAAAGAGTTTCTTACCAAA+AGG 0.418748 2.1:-67518766 None:intergenic
CCTCTGGCCCACACATTGGT+GGG 0.422184 2.1:-67519757 None:intergenic
TCTCATTGATTTCTGGATGC+AGG 0.429468 2.1:+67519224 MS.gene002745:CDS
CATAGGAAACGCCATCTCAT+TGG 0.436986 2.1:+67518576 MS.gene002745:CDS
CAACGGCGAGTCTGGCATTA+CGG 0.443747 2.1:-67519125 None:intergenic
TAAGATTCCGTCAACGGAAA+CGG 0.445106 2.1:-67519579 None:intergenic
GAGAAAGAGGATAATAATAG+AGG 0.454708 2.1:-67518436 None:intergenic
TAGACTCATGGGCTTGAGCT+TGG 0.460002 2.1:-67518939 None:intergenic
TACTTTGGTGCCGCATGTTG+CGG 0.460799 2.1:+67519551 MS.gene002745:CDS
TTACCGACCACCAGCTACTT+TGG 0.462145 2.1:+67519536 MS.gene002745:CDS
ACCTCTGGCCCACACATTGG+TGG 0.463771 2.1:-67519758 None:intergenic
GCCCAACGCTTTCCATCTTG+TGG 0.466664 2.1:+67518738 MS.gene002745:CDS
CCCATGATTTAAGATGTTTG+AGG 0.466832 2.1:-67518906 None:intergenic
AATCATGTTCAAATCTCTCT+CGG 0.472656 2.1:-67519044 None:intergenic
GATAACATCGGAGCAGTTAA+GGG 0.472782 2.1:+67519473 MS.gene002745:CDS
ACTTTCTAGCATTTGGAGCT+GGG 0.473086 2.1:+67519733 MS.gene002745:CDS
AGCGGCGAGTAAGGAGAAGA+TGG 0.473213 2.1:+67519179 MS.gene002745:CDS
AGACTCATGGGCTTGAGCTT+GGG 0.475253 2.1:-67518938 None:intergenic
AAAACCGGTCTGGGTCGAAC+CGG 0.483391 2.1:-67519674 None:intergenic
GTGTATGTAGAAAGCGCCTT+AGG 0.484393 2.1:-67518862 None:intergenic
GGGTTGTACAGCGGCGAGTA+AGG 0.485139 2.1:+67519170 MS.gene002745:CDS
GGGAGAACCAAAGATGGGCC+TGG 0.486922 2.1:-67518550 None:intergenic
GGAGAACCAAAGATGGGCCT+GGG 0.487711 2.1:-67518549 None:intergenic
CAAAAGGATGGCCCACAAGA+TGG 0.491389 2.1:-67518750 None:intergenic
TGAGATGGCGTTTCCTATGA+AGG 0.491858 2.1:-67518572 None:intergenic
CCCAACGCTTTCCATCTTGT+GGG 0.493749 2.1:+67518739 MS.gene002745:CDS
GATTACTTTCTCTTCAACGT+TGG 0.495270 2.1:+67519063 MS.gene002745:CDS
CCCACAAGATGGAAAGCGTT+GGG 0.496495 2.1:-67518739 None:intergenic
CCTCAAACATCTTAAATCAT+GGG 0.497070 2.1:+67518906 MS.gene002745:CDS
CGGTCTGGGTCGAACCGGTC+CGG 0.505094 2.1:-67519669 None:intergenic
TAATTGGTTGAAAGAGAAAG+AGG 0.508507 2.1:-67518449 None:intergenic
GATGATTCAAAGCGTACCTC+TGG 0.510126 2.1:-67519773 None:intergenic
GGCAACTTCTTCCCTCACTC+TGG 0.510937 2.1:-67519421 None:intergenic
ACATGCGGCACCAAAGTAGC+TGG 0.511652 2.1:-67519546 None:intergenic
TTGTCCTAAAGATGATTGTA+GGG 0.514709 2.1:+67519887 MS.gene002745:CDS
ACACAATCTTATCTACATGA+TGG 0.515797 2.1:+67518792 MS.gene002745:CDS
AGTAAGGAGAAGATGGAGAA+AGG 0.515835 2.1:+67519186 MS.gene002745:CDS
AAGATGACTCGAACGCCGAA+GGG 0.516284 2.1:-67519629 None:intergenic
GCAGTTCCCGGAAAGTCAAA+CGG 0.517756 2.1:-67519099 None:intergenic
ACCACCGATTTCAGCGTTGG+TGG 0.520559 2.1:-67519304 None:intergenic
TTCGTCGCTTCTTTGGGCGG+TGG 0.523611 2.1:+67519368 MS.gene002745:CDS
AGCTGGGCCCCACCAATGTG+TGG 0.524040 2.1:+67519749 MS.gene002745:CDS
GTTCAAGGAGGAGAAGGAAA+AGG 0.524798 2.1:-67518495 None:intergenic
AGCGCCTTAGGAGTGAAATT+CGG 0.526730 2.1:-67518850 None:intergenic
GAAAGCGTTGGGCTTTACAT+TGG 0.526946 2.1:-67518728 None:intergenic
TGAAATTCGGCGCGATTCGA+CGG 0.530838 2.1:-67518837 None:intergenic
CCGCTAGGGTTCCGGCGAGT+CGG 0.533184 2.1:-67519149 None:intergenic
CGCGCCGAATTTCACTCCTA+AGG 0.533242 2.1:+67518846 MS.gene002745:CDS
CTCTGGCCCACACATTGGTG+GGG 0.534062 2.1:-67519756 None:intergenic
GACTTCGTCGCTTCTTTGGG+CGG 0.534699 2.1:+67519365 MS.gene002745:CDS
AAAGATGACTCGAACGCCGA+AGG 0.534701 2.1:-67519630 None:intergenic
CACAATCTTATCTACATGAT+GGG 0.539508 2.1:+67518793 MS.gene002745:CDS
ATAACCACCGATTTCAGCGT+TGG 0.540093 2.1:-67519307 None:intergenic
TCACGAGAAAGTACACGGAT+TGG 0.540148 2.1:-67518964 None:intergenic
CAGAAATCAATGAGACAAGA+AGG 0.540242 2.1:-67519216 None:intergenic
ATGAAGGGGAGAACCAAAGA+TGG 0.542844 2.1:-67518556 None:intergenic
TCGCCGCTGTACAACCCGCT+AGG 0.542956 2.1:-67519164 None:intergenic
ATCATGTTCAAATCTCTCTC+GGG 0.544006 2.1:-67519043 None:intergenic
AACGGCTCTGCCGCAACATG+CGG 0.544241 2.1:-67519561 None:intergenic
CGACTCGCCGGAACCCTAGC+GGG 0.546189 2.1:+67519150 MS.gene002745:CDS
AGATCTGTTCAAGGAGGAGA+AGG 0.546647 2.1:-67518501 None:intergenic
CCCACCAATGTGTGGGCCAG+AGG 0.549703 2.1:+67519757 MS.gene002745:CDS
CACGGATTGGAATAGACTCA+TGG 0.553184 2.1:-67518951 None:intergenic
CGCCGCTGTACAACCCGCTA+GGG 0.554607 2.1:-67519163 None:intergenic
GGATAAAGCATATTAGGTAT+GGG 0.556182 2.1:-67518474 None:intergenic
ATTTCAGCGTTGGTGGAGAA+CGG 0.556836 2.1:-67519297 None:intergenic
AACCAAAGATGGGCCTGGGA+TGG 0.556837 2.1:-67518545 None:intergenic
GCCCACAAGATGGAAAGCGT+TGG 0.558548 2.1:-67518740 None:intergenic
TCCACAACCCCAGTAAATGA+AGG 0.563581 2.1:-67519939 None:intergenic
AGAGGTTCTCGCCAGAGTGA+GGG 0.564227 2.1:+67519410 MS.gene002745:CDS
CGTACCTCTGGCCCACACAT+TGG 0.569147 2.1:-67519761 None:intergenic
TGAGGTATGAGATCTGTTCA+AGG 0.573187 2.1:-67518510 None:intergenic
ATCGTGTAAGATTCCGTCAA+CGG 0.575389 2.1:-67519585 None:intergenic
ACGCGTCTTGTGCTGCGAAG+AGG 0.576235 2.1:-67519341 None:intergenic
GGTTCCGGCGAGTCGGTCAA+CGG 0.576734 2.1:-67519142 None:intergenic
AGAGTTTCTTACCAAAAGGA+TGG 0.576923 2.1:-67518762 None:intergenic
CACACAAGCGGTGGCGCGTG+AGG 0.579947 2.1:+67519506 MS.gene002745:CDS
AGAGTGAGGGAAGAAGTTGC+CGG 0.580981 2.1:+67519423 MS.gene002745:CDS
CTCGCCGTTGACCGACTCGC+CGG 0.582101 2.1:+67519138 MS.gene002745:CDS
TGATTTCAAGAGAGATAGAA+CGG 0.585491 2.1:+67519830 MS.gene002745:CDS
CAGAGGTTCTCGCCAGAGTG+AGG 0.585749 2.1:+67519409 MS.gene002745:CDS
GCTGGGCCCCACCAATGTGT+GGG 0.587228 2.1:+67519750 MS.gene002745:CDS
AAGGTTTCCTTCATTTACTG+GGG 0.593234 2.1:+67519932 MS.gene002745:CDS
TTCAAGAGAGATAGAACGGA+CGG 0.593977 2.1:+67519834 MS.gene002745:CDS
TTCTGTCTAAGCGTTGCACA+AGG 0.594634 2.1:+67519913 MS.gene002745:CDS
GAGATGGCGTTTCCTATGAA+GGG 0.595085 2.1:-67518571 None:intergenic
CGGACCGGTTCGACCCAGAC+CGG 0.595668 2.1:+67519670 MS.gene002745:CDS
TCCACCTTATCAAAATCCAC+TGG 0.602010 2.1:+67518631 MS.gene002745:CDS
ATTGCTGGATTCGCATCCAG+AGG 0.607890 2.1:+67519392 MS.gene002745:CDS
TGAAGGGGAGAACCAAAGAT+GGG 0.609616 2.1:-67518555 None:intergenic
ATTGAAGAATCGAAGCTGAA+CGG 0.619411 2.1:+67519261 MS.gene002745:CDS
AACCCTAGCGGGTTGTACAG+CGG 0.621201 2.1:+67519161 MS.gene002745:CDS
ACGGATTGGAATAGACTCAT+GGG 0.622968 2.1:-67518950 None:intergenic
GTTATCAGCGTATTCGACTC+CGG 0.623325 2.1:-67519456 None:intergenic
AGATGGCGTTTCCTATGAAG+GGG 0.627835 2.1:-67518570 None:intergenic
GCACCAAAGTAGCTGGTGGT+CGG 0.639250 2.1:-67519539 None:intergenic
CCGACTCGCCGGAACCCTAG+CGG 0.646571 2.1:+67519149 MS.gene002745:CDS
TGGGTCACGAACCAATGAGA+TGG 0.647439 2.1:-67518587 None:intergenic
TCATATCACGAGAAAGTACA+CGG 0.651010 2.1:-67518969 None:intergenic
GAATCTTACACGATTCCCAA+AGG 0.656637 2.1:+67519594 MS.gene002745:CDS
GTAGTTAGCTGAAAAGCCAG+TGG 0.671255 2.1:-67518647 None:intergenic
GTCGAATACGCTGATAACAT+CGG 0.671799 2.1:+67519461 MS.gene002745:CDS
AATTCGGCGCGATTCGACGG+CGG 0.671986 2.1:-67518834 None:intergenic
TCCACCAACGCTGAAATCGG+TGG 0.677015 2.1:+67519303 MS.gene002745:CDS
TGCGGCACCAAAGTAGCTGG+TGG 0.679995 2.1:-67519543 None:intergenic
TCAGCGTTGGTGGAGAACGG+TGG 0.681466 2.1:-67519294 None:intergenic
AGTTGCCGGAATCTGGACGC+CGG 0.682404 2.1:+67519437 MS.gene002745:CDS
TCATCTTTAGGACAAATCGT+AGG 0.690195 2.1:-67519879 None:intergenic
GGAGATGAAGTACACACAAG+CGG 0.691579 2.1:+67519494 MS.gene002745:CDS
GATGAAGTACACACAAGCGG+TGG 0.696798 2.1:+67519497 MS.gene002745:CDS
GGTATGAGATCTGTTCAAGG+AGG 0.730684 2.1:-67518507 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! ATATTAGGTATGGGATTAAT+TGG - chr2.1:67518468-67518487 None:intergenic 25.0%
!! AAAAGAAACTTTCTAGCATT+TGG + chr2.1:67519726-67519745 MS.gene002745:CDS 25.0%
AAAACCCTACAATCATCTTT+AGG - chr2.1:67519894-67519913 None:intergenic 30.0%
AATCATGTTCAAATCTCTCT+CGG - chr2.1:67519047-67519066 None:intergenic 30.0%
ACACAATCTTATCTACATGA+TGG + chr2.1:67518792-67518811 MS.gene002745:CDS 30.0%
ACTTTCTCGTGATATGAATT+TGG + chr2.1:67518975-67518994 MS.gene002745:CDS 30.0%
AGGATAAAGCATATTAGGTA+TGG - chr2.1:67518478-67518497 None:intergenic 30.0%
CACAATCTTATCTACATGAT+GGG + chr2.1:67518793-67518812 MS.gene002745:CDS 30.0%
CCTCAAACATCTTAAATCAT+GGG + chr2.1:67518906-67518925 MS.gene002745:CDS 30.0%
GAGAAAGAGGATAATAATAG+AGG - chr2.1:67518439-67518458 None:intergenic 30.0%
GGAAAAGGATAAAGCATATT+AGG - chr2.1:67518483-67518502 None:intergenic 30.0%
GGATAAAGCATATTAGGTAT+GGG - chr2.1:67518477-67518496 None:intergenic 30.0%
TAATTGGTTGAAAGAGAAAG+AGG - chr2.1:67518452-67518471 None:intergenic 30.0%
TCCTCAAACATCTTAAATCA+TGG + chr2.1:67518905-67518924 MS.gene002745:CDS 30.0%
TGATTTCAAGAGAGATAGAA+CGG + chr2.1:67519830-67519849 MS.gene002745:CDS 30.0%
TTGTCCTAAAGATGATTGTA+GGG + chr2.1:67519887-67519906 MS.gene002745:CDS 30.0%
TTTGTCCTAAAGATGATTGT+AGG + chr2.1:67519886-67519905 MS.gene002745:CDS 30.0%
! GAACTTCCCAAAATTTTGTT+GGG - chr2.1:67518609-67518628 None:intergenic 30.0%
! TGAACTTCCCAAAATTTTGT+TGG - chr2.1:67518610-67518629 None:intergenic 30.0%
! TTTTCAGCTAACTACATCAT+TGG + chr2.1:67518655-67518674 MS.gene002745:CDS 30.0%
AAGGTTTCCTTCATTTACTG+GGG + chr2.1:67519932-67519951 MS.gene002745:CDS 35.0%
ACAAGGTTTCCTTCATTTAC+TGG + chr2.1:67519930-67519949 MS.gene002745:CDS 35.0%
AGAGTTTCTTACCAAAAGGA+TGG - chr2.1:67518765-67518784 None:intergenic 35.0%
ATCATGTTCAAATCTCTCTC+GGG - chr2.1:67519046-67519065 None:intergenic 35.0%
ATTGAAGAATCGAAGCTGAA+CGG + chr2.1:67519261-67519280 MS.gene002745:CDS 35.0%
CAAGGTTTCCTTCATTTACT+GGG + chr2.1:67519931-67519950 MS.gene002745:CDS 35.0%
CAGAAATCAATGAGACAAGA+AGG - chr2.1:67519219-67519238 None:intergenic 35.0%
CCAAAGAGTTTCTTACCAAA+AGG - chr2.1:67518769-67518788 None:intergenic 35.0%
GATTACTTTCTCTTCAACGT+TGG + chr2.1:67519063-67519082 MS.gene002745:CDS 35.0%
! CCCATGATTTAAGATGTTTG+AGG - chr2.1:67518909-67518928 None:intergenic 35.0%
! CCTTTTGGTAAGAAACTCTT+TGG + chr2.1:67518766-67518785 MS.gene002745:CDS 35.0%
! CTTGTCTTTCTTCTGAAAAC+CGG - chr2.1:67519692-67519711 None:intergenic 35.0%
! GTTTTCAGAAGAAAGACAAG+AGG + chr2.1:67519692-67519711 MS.gene002745:CDS 35.0%
! TCATATCACGAGAAAGTACA+CGG - chr2.1:67518972-67518991 None:intergenic 35.0%
! TCGTGACCCAACAAAATTTT+GGG + chr2.1:67518600-67518619 MS.gene002745:CDS 35.0%
! TTCGTGACCCAACAAAATTT+TGG + chr2.1:67518599-67518618 MS.gene002745:CDS 35.0%
!! AAAGCCAGTGGATTTTGATA+AGG - chr2.1:67518638-67518657 None:intergenic 35.0%
!! CTTCTTGTCTCATTGATTTC+TGG + chr2.1:67519217-67519236 MS.gene002745:CDS 35.0%
!! TCATCTTTAGGACAAATCGT+AGG - chr2.1:67519882-67519901 None:intergenic 35.0%
!! TTTTCAGGGTTTTACTGAAC+CGG + chr2.1:67519650-67519669 MS.gene002745:CDS 35.0%
AACAAAAAACGTTCCATCCC+AGG + chr2.1:67518532-67518551 MS.gene002745:CDS 40.0%
AGGGAAAACTATTGCACCTT+TGG - chr2.1:67519613-67519632 None:intergenic 40.0%
AGTAAGGAGAAGATGGAGAA+AGG + chr2.1:67519186-67519205 MS.gene002745:CDS 40.0%
ATCGTGTAAGATTCCGTCAA+CGG - chr2.1:67519588-67519607 None:intergenic 40.0%
GAATCTTACACGATTCCCAA+AGG + chr2.1:67519594-67519613 MS.gene002745:CDS 40.0%
GATAACATCGGAGCAGTTAA+GGG + chr2.1:67519473-67519492 MS.gene002745:CDS 40.0%
GGGAAAACTATTGCACCTTT+GGG - chr2.1:67519612-67519631 None:intergenic 40.0%
GTCGAATACGCTGATAACAT+CGG + chr2.1:67519461-67519480 MS.gene002745:CDS 40.0%
TAAGATTCCGTCAACGGAAA+CGG - chr2.1:67519582-67519601 None:intergenic 40.0%
TCCACCTTATCAAAATCCAC+TGG + chr2.1:67518631-67518650 MS.gene002745:CDS 40.0%
TGAGGTATGAGATCTGTTCA+AGG - chr2.1:67518513-67518532 None:intergenic 40.0%
TGATAACATCGGAGCAGTTA+AGG + chr2.1:67519472-67519491 MS.gene002745:CDS 40.0%
TTCAAGAGAGATAGAACGGA+CGG + chr2.1:67519834-67519853 MS.gene002745:CDS 40.0%
! AACGTCTCAGAAAGTTTTCG+TGG + chr2.1:67518999-67519018 MS.gene002745:CDS 40.0%
! AACTTTCTAGCATTTGGAGC+TGG + chr2.1:67519732-67519751 MS.gene002745:CDS 40.0%
! ACGTCTCAGAAAGTTTTCGT+GGG + chr2.1:67519000-67519019 MS.gene002745:CDS 40.0%
! ACTTTCTAGCATTTGGAGCT+GGG + chr2.1:67519733-67519752 MS.gene002745:CDS 40.0%
! AGGTGCAATAGTTTTCCCTT+CGG + chr2.1:67519614-67519633 MS.gene002745:CDS 40.0%
! AGTTTTCGTGGGACCTTATT+TGG + chr2.1:67519011-67519030 MS.gene002745:CDS 40.0%
! TTTCTTCTGAAAACCGGTCT+GGG - chr2.1:67519686-67519705 None:intergenic 40.0%
!! ACGGATTGGAATAGACTCAT+GGG - chr2.1:67518953-67518972 None:intergenic 40.0%
!! GTTTTCGTGGGACCTTATTT+GGG + chr2.1:67519012-67519031 MS.gene002745:CDS 40.0%
!! TCTCATTGATTTCTGGATGC+AGG + chr2.1:67519224-67519243 MS.gene002745:CDS 40.0%
!!! GGATGGAACGTTTTTTGTTG+AGG - chr2.1:67518531-67518550 None:intergenic 40.0%
AGATCTGTTCAAGGAGGAGA+AGG - chr2.1:67518504-67518523 None:intergenic 45.0%
AGATGGCGTTTCCTATGAAG+GGG - chr2.1:67518573-67518592 None:intergenic 45.0%
AGCGCCTTAGGAGTGAAATT+CGG - chr2.1:67518853-67518872 None:intergenic 45.0%
ATGAAGGGGAGAACCAAAGA+TGG - chr2.1:67518559-67518578 None:intergenic 45.0%
CATAGGAAACGCCATCTCAT+TGG + chr2.1:67518576-67518595 MS.gene002745:CDS 45.0%
GAGATGGCGTTTCCTATGAA+GGG - chr2.1:67518574-67518593 None:intergenic 45.0%
GATGATTCAAAGCGTACCTC+TGG - chr2.1:67519776-67519795 None:intergenic 45.0%
GGAGATGAAGTACACACAAG+CGG + chr2.1:67519494-67519513 MS.gene002745:CDS 45.0%
GGTATGAGATCTGTTCAAGG+AGG - chr2.1:67518510-67518529 None:intergenic 45.0%
GTAGTTAGCTGAAAAGCCAG+TGG - chr2.1:67518650-67518669 None:intergenic 45.0%
GTTATCAGCGTATTCGACTC+CGG - chr2.1:67519459-67519478 None:intergenic 45.0%
GTTCAAGGAGGAGAAGGAAA+AGG - chr2.1:67518498-67518517 None:intergenic 45.0%
TCCACAACCCCAGTAAATGA+AGG - chr2.1:67519942-67519961 None:intergenic 45.0%
TCCTTCATTTACTGGGGTTG+TGG + chr2.1:67519938-67519957 MS.gene002745:CDS 45.0%
TGAAGGGGAGAACCAAAGAT+GGG - chr2.1:67518558-67518577 None:intergenic 45.0%
TGAGATGGCGTTTCCTATGA+AGG - chr2.1:67518575-67518594 None:intergenic 45.0%
TTCTCCACCAACGCTGAAAT+CGG + chr2.1:67519300-67519319 MS.gene002745:CDS 45.0%
! AAGCTTCCGTTTGACTTTCC+GGG + chr2.1:67519093-67519112 MS.gene002745:CDS 45.0%
! CTTTCTTCTGAAAACCGGTC+TGG - chr2.1:67519687-67519706 None:intergenic 45.0%
! GAAGCTTCCGTTTGACTTTC+CGG + chr2.1:67519092-67519111 MS.gene002745:CDS 45.0%
! GCGTTCGAGTCATCTTTTCA+GGG + chr2.1:67519636-67519655 MS.gene002745:CDS 45.0%
! TCACGAGAAAGTACACGGAT+TGG - chr2.1:67518967-67518986 None:intergenic 45.0%
! TTCTGTCTAAGCGTTGCACA+AGG + chr2.1:67519913-67519932 MS.gene002745:CDS 45.0%
!! ATAACCACCGATTTCAGCGT+TGG - chr2.1:67519310-67519329 None:intergenic 45.0%
!! ATTTCAGCGTTGGTGGAGAA+CGG - chr2.1:67519300-67519319 None:intergenic 45.0%
!! CACGGATTGGAATAGACTCA+TGG - chr2.1:67518954-67518973 None:intergenic 45.0%
!! GAAAGCGTTGGGCTTTACAT+TGG - chr2.1:67518731-67518750 None:intergenic 45.0%
!! GCCAGTGGATTTTGATAAGG+TGG - chr2.1:67518635-67518654 None:intergenic 45.0%
!! GTGTATGTAGAAAGCGCCTT+AGG - chr2.1:67518865-67518884 None:intergenic 45.0%
!! TCTTTGGTTCTCCCCTTCAT+AGG + chr2.1:67518559-67518578 MS.gene002745:CDS 45.0%
AAAGATGACTCGAACGCCGA+AGG - chr2.1:67519633-67519652 None:intergenic 50.0%
AAGATGACTCGAACGCCGAA+GGG - chr2.1:67519632-67519651 None:intergenic 50.0%
AGACTCATGGGCTTGAGCTT+GGG - chr2.1:67518941-67518960 None:intergenic 50.0%
AGAGTGAGGGAAGAAGTTGC+CGG + chr2.1:67519423-67519442 MS.gene002745:CDS 50.0%
ATTGCTGGATTCGCATCCAG+AGG + chr2.1:67519392-67519411 MS.gene002745:CDS 50.0%
CAAAAGGATGGCCCACAAGA+TGG - chr2.1:67518753-67518772 None:intergenic 50.0%
CAAATCTCTCTCGGGCTTTC+AGG - chr2.1:67519038-67519057 None:intergenic 50.0%
CCCAACGCTTTCCATCTTGT+GGG + chr2.1:67518739-67518758 MS.gene002745:CDS 50.0%
GATGAAGTACACACAAGCGG+TGG + chr2.1:67519497-67519516 MS.gene002745:CDS 50.0%
GCAGTTCCCGGAAAGTCAAA+CGG - chr2.1:67519102-67519121 None:intergenic 50.0%
TAGACTCATGGGCTTGAGCT+TGG - chr2.1:67518942-67518961 None:intergenic 50.0%
TGAAATTCGGCGCGATTCGA+CGG - chr2.1:67518840-67518859 None:intergenic 50.0%
TGGGTCACGAACCAATGAGA+TGG - chr2.1:67518590-67518609 None:intergenic 50.0%
TTACCGACCACCAGCTACTT+TGG + chr2.1:67519536-67519555 MS.gene002745:CDS 50.0%
! AGGGTTTTACTGAACCGGAC+CGG + chr2.1:67519655-67519674 MS.gene002745:CDS 50.0%
! CATCTTGTGGGCCATCCTTT+TGG + chr2.1:67518751-67518770 MS.gene002745:CDS 50.0%
! GGCGTTCGAGTCATCTTTTC+AGG + chr2.1:67519635-67519654 MS.gene002745:CDS 50.0%
! GTCGACTTCGTCGCTTCTTT+GGG + chr2.1:67519362-67519381 MS.gene002745:CDS 50.0%
!! CCCACAAGATGGAAAGCGTT+GGG - chr2.1:67518742-67518761 None:intergenic 50.0%
!! TACTTTGGTGCCGCATGTTG+CGG + chr2.1:67519551-67519570 MS.gene002745:CDS 50.0%
AAAACCGGTCTGGGTCGAAC+CGG - chr2.1:67519677-67519696 None:intergenic 55.0%
AACCAAAGATGGGCCTGGGA+TGG - chr2.1:67518548-67518567 None:intergenic 55.0%
ACATGCGGCACCAAAGTAGC+TGG - chr2.1:67519549-67519568 None:intergenic 55.0%
AGAGGTTCTCGCCAGAGTGA+GGG + chr2.1:67519410-67519429 MS.gene002745:CDS 55.0%
AGCGGCGAGTAAGGAGAAGA+TGG + chr2.1:67519179-67519198 MS.gene002745:CDS 55.0%
CAACGGCGAGTCTGGCATTA+CGG - chr2.1:67519128-67519147 None:intergenic 55.0%
CGCGCCGAATTTCACTCCTA+AGG + chr2.1:67518846-67518865 MS.gene002745:CDS 55.0%
CGGGCTTTCAGGCCCAAATA+AGG - chr2.1:67519027-67519046 None:intergenic 55.0%
GACTTCGTCGCTTCTTTGGG+CGG + chr2.1:67519365-67519384 MS.gene002745:CDS 55.0%
GCACCAAAGTAGCTGGTGGT+CGG - chr2.1:67519542-67519561 None:intergenic 55.0%
GCATTACGGAACGCAGTTCC+CGG - chr2.1:67519114-67519133 None:intergenic 55.0%
GCCCAACGCTTTCCATCTTG+TGG + chr2.1:67518738-67518757 MS.gene002745:CDS 55.0%
GGAGAACCAAAGATGGGCCT+GGG - chr2.1:67518552-67518571 None:intergenic 55.0%
GGCAACTTCTTCCCTCACTC+TGG - chr2.1:67519424-67519443 None:intergenic 55.0%
GGGAAGAAGTTGCCGGAATC+TGG + chr2.1:67519430-67519449 MS.gene002745:CDS 55.0%
TCCACCAACGCTGAAATCGG+TGG + chr2.1:67519303-67519322 MS.gene002745:CDS 55.0%
TGTACAACCCGCTAGGGTTC+CGG - chr2.1:67519160-67519179 None:intergenic 55.0%
TTCCATCCCAGGCCCATCTT+TGG + chr2.1:67518543-67518562 MS.gene002745:CDS 55.0%
! GCCCACAAGATGGAAAGCGT+TGG - chr2.1:67518743-67518762 None:intergenic 55.0%
!! AACCCTAGCGGGTTGTACAG+CGG + chr2.1:67519161-67519180 MS.gene002745:CDS 55.0%
!! ACCACCGATTTCAGCGTTGG+TGG - chr2.1:67519307-67519326 None:intergenic 55.0%
!! CGTCGACTTCGTCGCTTCTT+TGG + chr2.1:67519361-67519380 MS.gene002745:CDS 55.0%
AACGGCTCTGCCGCAACATG+CGG - chr2.1:67519564-67519583 None:intergenic 60.0%
AATTCGGCGCGATTCGACGG+CGG - chr2.1:67518837-67518856 None:intergenic 60.0%
ACCTCTGGCCCACACATTGG+TGG - chr2.1:67519761-67519780 None:intergenic 60.0%
ACGCGTCTTGTGCTGCGAAG+AGG - chr2.1:67519344-67519363 None:intergenic 60.0%
AGTTGCCGGAATCTGGACGC+CGG + chr2.1:67519437-67519456 MS.gene002745:CDS 60.0%
CAGAGGTTCTCGCCAGAGTG+AGG + chr2.1:67519409-67519428 MS.gene002745:CDS 60.0%
CCTCTGGCCCACACATTGGT+GGG - chr2.1:67519760-67519779 None:intergenic 60.0%
CGTACCTCTGGCCCACACAT+TGG - chr2.1:67519764-67519783 None:intergenic 60.0%
CTCACTCTGGCGAGAACCTC+TGG - chr2.1:67519411-67519430 None:intergenic 60.0%
CTCTGGCCCACACATTGGTG+GGG - chr2.1:67519759-67519778 None:intergenic 60.0%
GGCAGAGCCGTTTCCGTTGA+CGG + chr2.1:67519572-67519591 MS.gene002745:CDS 60.0%
GGGAGAACCAAAGATGGGCC+TGG - chr2.1:67518553-67518572 None:intergenic 60.0%
GGGTTGTACAGCGGCGAGTA+AGG + chr2.1:67519170-67519189 MS.gene002745:CDS 60.0%
TCTTTGGGCGGTGGCATTGC+TGG + chr2.1:67519377-67519396 MS.gene002745:CDS 60.0%
TGCGGCACCAAAGTAGCTGG+TGG - chr2.1:67519546-67519565 None:intergenic 60.0%
TTCGTCGCTTCTTTGGGCGG+TGG + chr2.1:67519368-67519387 MS.gene002745:CDS 60.0%
!! TCAGCGTTGGTGGAGAACGG+TGG - chr2.1:67519297-67519316 None:intergenic 60.0%
AGCTGGGCCCCACCAATGTG+TGG + chr2.1:67519749-67519768 MS.gene002745:CDS 65.0%
CCCACCAATGTGTGGGCCAG+AGG + chr2.1:67519757-67519776 MS.gene002745:CDS 65.0%
CGACTCCGGCGTCCAGATTC+CGG - chr2.1:67519445-67519464 None:intergenic 65.0%
CGCCGCTGTACAACCCGCTA+GGG - chr2.1:67519166-67519185 None:intergenic 65.0%
GAGTCGGTCAACGGCGAGTC+TGG - chr2.1:67519136-67519155 None:intergenic 65.0%
GCTGGGCCCCACCAATGTGT+GGG + chr2.1:67519750-67519769 MS.gene002745:CDS 65.0%
GGTTCCGGCGAGTCGGTCAA+CGG - chr2.1:67519145-67519164 None:intergenic 65.0%
TCGCCGCTGTACAACCCGCT+AGG - chr2.1:67519167-67519186 None:intergenic 65.0%
CACACAAGCGGTGGCGCGTG+AGG + chr2.1:67519506-67519525 MS.gene002745:CDS 70.0%
CCGCTAGGGTTCCGGCGAGT+CGG - chr2.1:67519152-67519171 None:intergenic 70.0%
CGACTCGCCGGAACCCTAGC+GGG + chr2.1:67519150-67519169 MS.gene002745:CDS 70.0%
CGGTCTGGGTCGAACCGGTC+CGG - chr2.1:67519672-67519691 None:intergenic 70.0%
! CCGACTCGCCGGAACCCTAG+CGG + chr2.1:67519149-67519168 MS.gene002745:CDS 70.0%
!! CGGACCGGTTCGACCCAGAC+CGG + chr2.1:67519670-67519689 MS.gene002745:CDS 70.0%
!! CTCGCCGTTGACCGACTCGC+CGG + chr2.1:67519138-67519157 MS.gene002745:CDS 70.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 67518421 67519974 67518421 ID=MS.gene002745
chr2.1 mRNA 67518421 67519974 67518421 ID=MS.gene002745.t1;Parent=MS.gene002745
chr2.1 exon 67518421 67519974 67518421 ID=MS.gene002745.t1.exon1;Parent=MS.gene002745.t1
chr2.1 CDS 67518421 67519974 67518421 ID=cds.MS.gene002745.t1;Parent=MS.gene002745.t1
Gene Sequence

>MS.gene002745

ATGAATATGAATGCTCCTCTATTATTATCCTCTTTCTCTTTCAACCAATTAATCCCATACCTAATATGCTTTATCCTTTTCCTTCTCCTCCTTGAACAGATCTCATACCTCAACAAAAAACGTTCCATCCCAGGCCCATCTTTGGTTCTCCCCTTCATAGGAAACGCCATCTCATTGGTTCGTGACCCAACAAAATTTTGGGAAGTTCAATCCACCTTATCAAAATCCACTGGCTTTTCAGCTAACTACATCATTGGACTCTTTATAGTCTTCATTAGAGACACTGAACTCTCTCATAAAGTCTTCTCCAATGTAAAGCCCAACGCTTTCCATCTTGTGGGCCATCCTTTTGGTAAGAAACTCTTTGGTGAACACAATCTTATCTACATGATGGGTCAAGAACACAAGAATCTCCGCCGTCGAATCGCGCCGAATTTCACTCCTAAGGCGCTTTCTACATACACTGAGCTACAGCAGATTATTATCCTCAAACATCTTAAATCATGGGTTGAGATAGCCCAAGCTCAAGCCCATGAGTCTATTCCAATCCGTGTACTTTCTCGTGATATGAATTTGGAAACGTCTCAGAAAGTTTTCGTGGGACCTTATTTGGGCCTGAAAGCCCGAGAGAGATTTGAACATGATTACTTTCTCTTCAACGTTGGTCTCATGAAGCTTCCGTTTGACTTTCCGGGAACTGCGTTCCGTAATGCCAGACTCGCCGTTGACCGACTCGCCGGAACCCTAGCGGGTTGTACAGCGGCGAGTAAGGAGAAGATGGAGAAAGGTGAAGAGCCTTCTTGTCTCATTGATTTCTGGATGCAGGATACTATAAGAGAGATTGAAGAATCGAAGCTGAACGGAATAACAGTGCCACCGTTCTCCACCAACGCTGAAATCGGTGGTTATCTCTTCGATTTCCTCTTCGCAGCACAAGACGCGTCGACTTCGTCGCTTCTTTGGGCGGTGGCATTGCTGGATTCGCATCCAGAGGTTCTCGCCAGAGTGAGGGAAGAAGTTGCCGGAATCTGGACGCCGGAGTCGAATACGCTGATAACATCGGAGCAGTTAAGGGAGATGAAGTACACACAAGCGGTGGCGCGTGAGGTTATTCGTTACCGACCACCAGCTACTTTGGTGCCGCATGTTGCGGCAGAGCCGTTTCCGTTGACGGAATCTTACACGATTCCCAAAGGTGCAATAGTTTTCCCTTCGGCGTTCGAGTCATCTTTTCAGGGTTTTACTGAACCGGACCGGTTCGACCCAGACCGGTTTTCAGAAGAAAGACAAGAGGATCAAATATTTAAAAGAAACTTTCTAGCATTTGGAGCTGGGCCCCACCAATGTGTGGGCCAGAGGTACGCTTTGAATCATCTTGTGCTTTTCATTGCTATGTTCACATCGTTGATTGATTTCAAGAGAGATAGAACGGACGGTTGTGATGAGATCGTGTATGTGCCTACGATTTGTCCTAAAGATGATTGTAGGGTTTTTCTGTCTAAGCGTTGCACAAGGTTTCCTTCATTTACTGGGGTTGTGGAGCTTGTGAAATGA
Protein sequence

>MS.gene002745.t1

MNMNAPLLLSSFSFNQLIPYLICFILFLLLLEQISYLNKKRSIPGPSLVLPFIGNAISLVRDPTKFWEVQSTLSKSTGFSANYIIGLFIVFIRDTELSHKVFSNVKPNAFHLVGHPFGKKLFGEHNLIYMMGQEHKNLRRRIAPNFTPKALSTYTELQQIIILKHLKSWVEIAQAQAHESIPIRVLSRDMNLETSQKVFVGPYLGLKARERFEHDYFLFNVGLMKLPFDFPGTAFRNARLAVDRLAGTLAGCTAASKEKMEKGEEPSCLIDFWMQDTIREIEESKLNGITVPPFSTNAEIGGYLFDFLFAAQDASTSSLLWAVALLDSHPEVLARVREEVAGIWTPESNTLITSEQLREMKYTQAVAREVIRYRPPATLVPHVAAEPFPLTESYTIPKGAIVFPSAFESSFQGFTEPDRFDPDRFSEERQEDQIFKRNFLAFGAGPHQCVGQRYALNHLVLFIAMFTSLIDFKRDRTDGCDEIVYVPTICPKDDCRVFLSKRCTRFPSFTGVVELVK