AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene068070


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene068070.t1 MTR_7g088330 95.778 450 19 0 1 450 1 450 0.0 880
MS.gene068070.t1 MTR_7g096340 48.910 413 200 5 40 450 40 443 1.45e-136 402
MS.gene068070.t1 MTR_7g096320 48.184 413 203 4 40 450 41 444 7.35e-134 395
MS.gene068070.t1 MTR_1g070365 46.171 444 225 7 11 450 12 445 7.77e-128 380
MS.gene068070.t1 MTR_1g070345 45.652 414 213 5 40 450 41 445 1.26e-126 377
MS.gene068070.t1 MTR_3g080580 44.218 441 223 9 24 450 29 460 4.79e-121 363
MS.gene068070.t1 MTR_1g060550 46.447 394 195 7 60 450 71 451 5.21e-119 358
MS.gene068070.t1 MTR_4g054920 45.679 405 195 7 58 450 67 458 9.41e-119 357
MS.gene068070.t1 MTR_4g075110 43.013 458 231 11 13 450 45 492 4.88e-115 349
MS.gene068070.t1 MTR_2g086040 44.757 391 200 7 60 450 66 440 2.37e-114 345
MS.gene068070.t1 MTR_7g029275 41.447 456 241 9 6 450 11 451 9.06e-114 344
MS.gene068070.t1 MTR_1g037560 42.273 440 223 11 31 450 58 486 1.15e-108 333
MS.gene068070.t1 MTR_1g037550 43.468 444 216 13 31 450 58 490 2.00e-107 330
MS.gene068070.t1 MTR_8g098435 40.481 457 244 10 10 450 4 448 9.88e-106 324
MS.gene068070.t1 MTR_8g030590 41.087 460 241 13 10 450 5 453 1.06e-105 325
MS.gene068070.t1 MTR_4g119660 38.771 472 239 13 12 450 4 458 3.50e-103 317
MS.gene068070.t1 MTR_5g019140 38.559 472 240 13 12 450 19 473 1.91e-102 316
MS.gene068070.t1 MTR_5g070010 39.602 452 232 12 22 450 18 451 6.44e-100 309
MS.gene068070.t1 MTR_1g102220 38.005 421 239 8 40 450 40 448 2.32e-98 305
MS.gene068070.t1 MTR_3g463060 39.344 427 229 12 38 450 35 445 2.82e-94 294
MS.gene068070.t1 MTR_8g035760 37.321 418 241 9 42 450 48 453 8.65e-92 288
MS.gene068070.t1 MTR_8g035860 35.635 449 257 11 19 450 18 451 2.26e-90 284
MS.gene068070.t1 MTR_8g035680 35.800 419 247 9 42 450 48 454 9.66e-90 283
MS.gene068070.t1 MTR_8g035810 34.676 447 265 10 19 450 18 452 3.04e-89 280
MS.gene068070.t1 MTR_8g035810 34.899 447 264 10 19 450 18 452 3.80e-89 281
MS.gene068070.t1 MTR_8g035820 34.298 449 263 10 19 450 18 451 3.53e-88 278
MS.gene068070.t1 MTR_8g035780 35.294 425 243 11 43 450 43 452 5.64e-82 263
MS.gene068070.t1 MTR_7g406990 41.209 364 192 10 31 378 39 396 1.80e-79 254
MS.gene068070.t1 MTR_1g035750 33.043 460 275 9 11 450 2 448 1.42e-77 251
MS.gene068070.t1 MTR_8g088470 35.308 422 244 12 42 450 29 434 1.21e-76 248
MS.gene068070.t1 MTR_7g033580 34.744 449 260 13 15 450 9 437 2.84e-75 244
MS.gene068070.t1 MTR_6g004630 32.339 436 266 10 10 427 3 427 7.06e-73 238
MS.gene068070.t1 MTR_1g036130 34.483 435 252 9 12 427 10 430 1.20e-72 238
MS.gene068070.t1 MTR_6g004600 32.403 466 264 14 14 445 8 456 3.66e-72 237
MS.gene068070.t1 MTR_7g033570 34.515 423 245 12 42 450 33 437 9.07e-72 235
MS.gene068070.t1 MTR_1g050362 33.551 459 274 11 11 450 4 450 9.22e-72 236
MS.gene068070.t1 MTR_1g035670 33.181 437 251 9 12 427 10 426 2.49e-70 232
MS.gene068070.t1 MTR_6g004670 32.667 450 275 12 15 450 13 448 1.30e-69 230
MS.gene068070.t1 MTR_1g035860 34.411 433 259 11 9 427 11 432 4.29e-69 228
MS.gene068070.t1 MTR_1g035790 32.558 430 252 9 42 450 33 445 1.11e-68 228
MS.gene068070.t1 MTR_1g035830 34.223 412 249 7 42 436 34 440 3.64e-68 226
MS.gene068070.t1 MTR_6g004590 31.486 451 277 13 19 445 14 456 4.20e-68 226
MS.gene068070.t1 MTR_1g070370 44.534 247 126 3 177 421 5 242 1.47e-67 216
MS.gene068070.t1 MTR_1g036010 33.659 410 254 7 42 436 34 440 2.53e-67 224
MS.gene068070.t1 MTR_1g036200 31.957 460 272 13 11 450 4 442 4.92e-67 223
MS.gene068070.t1 MTR_1g035760 31.850 427 243 9 16 427 10 403 1.05e-66 221
MS.gene068070.t1 MTR_8g035680 35.873 315 183 7 146 450 2 307 2.76e-66 217
MS.gene068070.t1 MTR_1g035940 31.696 448 280 9 18 450 14 450 4.42e-66 221
MS.gene068070.t1 MTR_1g036270 31.364 440 254 11 42 450 33 455 9.56e-65 217
MS.gene068070.t1 MTR_6g004610 31.759 381 236 8 62 427 16 387 6.62e-64 214
MS.gene068070.t1 MTR_8g035810 32.578 353 216 8 40 377 39 384 2.39e-62 207
MS.gene068070.t1 MTR_1g035580 29.977 437 249 9 42 450 32 439 1.57e-61 208
MS.gene068070.t1 MTR_1g035800 32.854 417 236 10 42 427 33 436 1.94e-61 209
MS.gene068070.t1 MTR_1g102210 36.455 299 148 7 162 450 37 303 5.16e-57 193
MS.gene068070.t1 MTR_1g069715 33.428 353 213 5 92 427 2 349 2.42e-56 198
MS.gene068070.t1 MTR_2g062670 38.071 197 115 3 165 361 56 245 3.82e-36 139
MS.gene068070.t1 MTR_2g062670 32.836 201 88 5 172 371 279 433 6.97e-25 107
MS.gene068070.t1 MTR_4g012320 40.606 165 92 3 287 450 7 166 4.01e-36 133
MS.gene068070.t1 MTR_2g061750 35.870 184 103 3 82 253 12 192 4.79e-31 119
MS.gene068070.t1 MTR_2g061740 35.870 184 103 3 82 253 12 192 6.30e-31 119
MS.gene068070.t1 MTR_7g079440 24.103 390 263 12 85 460 232 602 3.69e-27 115
MS.gene068070.t1 MTR_7g079440 24.129 373 252 11 85 445 232 585 4.30e-27 114
MS.gene068070.t1 MTR_1g062190 25.505 396 258 14 80 458 117 492 1.06e-26 113
MS.gene068070.t1 MTR_2g062680 35.260 173 77 4 280 451 16 154 1.11e-24 101
MS.gene068070.t1 MTR_5g009110 24.000 375 245 11 85 432 117 478 6.84e-23 102
MS.gene068070.t1 MTR_3g467290 22.388 469 320 17 8 448 17 469 2.65e-21 97.1
MS.gene068070.t1 MTR_7g006900 24.611 321 214 8 115 426 99 400 7.22e-21 95.5
MS.gene068070.t1 MTR_8g046580 32.051 156 102 2 40 195 13 164 9.03e-21 93.2
MS.gene068070.t1 MTR_8g046580 47.945 73 33 1 378 450 193 260 1.95e-14 74.3
MS.gene068070.t1 MTR_5g009110 23.708 329 219 9 85 393 117 433 2.69e-20 93.6
MS.gene068070.t1 MTR_5g009110 24.556 338 214 11 118 427 1 325 2.72e-19 90.1
MS.gene068070.t1 MTR_6g017325 24.534 322 213 9 115 426 134 435 2.19e-18 88.2
MS.gene068070.t1 MTR_6g084770 23.923 418 268 12 38 432 40 430 3.69e-18 87.4
MS.gene068070.t1 MTR_5g019010 22.973 444 288 17 10 426 6 422 3.92e-18 87.4
MS.gene068070.t1 MTR_4g089020 22.936 436 293 13 14 432 9 418 5.94e-17 83.6
MS.gene068070.t1 MTR_1g107295 24.740 384 250 12 75 433 73 442 6.98e-17 83.6
MS.gene068070.t1 MTR_5g009110 23.649 296 195 8 118 393 1 285 1.01e-16 81.3
MS.gene068070.t1 MTR_8g042000 24.202 376 226 15 76 425 105 447 1.22e-16 82.8
MS.gene068070.t1 MTR_4g062510 23.698 384 256 13 75 436 72 440 1.96e-16 82.0
MS.gene068070.t1 MTR_0025s0110 23.006 326 219 12 119 433 152 456 2.70e-16 81.6
MS.gene068070.t1 MTR_0147s0030 21.220 377 262 9 80 443 118 472 2.94e-16 81.6
MS.gene068070.t1 MTR_3g467220 21.491 456 325 15 11 448 19 459 4.24e-16 80.9
MS.gene068070.t1 MTR_5g073020 23.834 386 249 14 72 433 66 430 4.58e-16 80.9
MS.gene068070.t1 MTR_8g042020 23.873 377 225 15 76 425 105 446 5.73e-16 80.5
MS.gene068070.t1 MTR_3g076530 23.543 446 309 14 1 432 1 428 7.55e-16 80.1
MS.gene068070.t1 MTR_5g095290 22.738 409 265 16 43 432 49 425 1.91e-15 79.0
MS.gene068070.t1 MTR_7g055793 21.485 377 261 9 80 443 111 465 2.91e-15 78.6
MS.gene068070.t1 MTR_4g104610 20.674 445 310 13 12 432 1 426 3.19e-15 78.2
MS.gene068070.t1 MTR_7g055793 21.485 377 261 9 80 443 56 410 3.53e-15 77.8
MS.gene068070.t1 MTR_2g061910 39.130 92 51 1 80 166 62 153 3.79e-15 73.6
MS.gene068070.t1 MTR_3g025260 22.368 380 262 10 75 433 67 434 8.61e-15 77.0
MS.gene068070.t1 MTR_4g088160 26.364 220 139 7 230 433 213 425 8.80e-15 77.0
MS.gene068070.t1 MTR_4g062500 23.419 427 282 15 31 433 29 434 1.34e-14 76.3
MS.gene068070.t1 MTR_7g079440 22.348 264 184 7 85 336 232 486 1.50e-14 76.3
MS.gene068070.t1 MTR_0171s0020 24.590 366 242 15 80 427 77 426 1.58e-14 76.3
MS.gene068070.t1 MTR_5g095260 23.153 406 257 16 41 428 54 422 1.58e-14 76.3
MS.gene068070.t1 MTR_3g093530 21.652 351 248 8 103 443 132 465 1.59e-14 76.3
MS.gene068070.t1 MTR_5g007450 23.596 445 280 17 12 432 14 422 2.26e-14 75.5
MS.gene068070.t1 MTR_3g436390 21.786 459 304 15 30 466 31 456 3.34e-14 75.1
MS.gene068070.t1 MTR_5g007550 23.371 445 281 17 12 432 14 422 4.26e-14 74.7
MS.gene068070.t1 MTR_5g094540 24.891 458 267 20 7 428 5 421 4.55e-14 74.7
MS.gene068070.t1 MTR_7g075610 21.292 418 294 13 29 430 28 426 5.61e-14 74.3
MS.gene068070.t1 MTR_1g031700 22.197 437 306 15 12 433 8 425 6.56e-14 74.3
MS.gene068070.t1 MTR_1g103670 24.664 446 283 21 11 433 10 425 8.57e-14 73.9
MS.gene068070.t1 MTR_2g061760 33.673 98 63 1 157 254 4 99 1.20e-13 67.4
MS.gene068070.t1 MTR_5g094520 21.839 435 287 16 18 428 47 452 1.37e-13 73.2
MS.gene068070.t1 MTR_8g036185 33.858 127 78 3 301 427 308 428 1.39e-13 73.2
MS.gene068070.t1 MTR_2g010380 24.522 314 214 9 127 427 127 430 1.43e-13 73.2
MS.gene068070.t1 MTR_3g436540 21.634 453 295 14 2 427 7 426 1.85e-13 72.8
MS.gene068070.t1 MTR_3g058220 21.957 460 287 20 10 432 2 426 1.99e-13 72.8
MS.gene068070.t1 MTR_4g089030 20.993 443 309 16 12 434 25 446 2.03e-13 72.8
MS.gene068070.t1 MTR_8g073950 20.270 444 321 15 15 437 17 448 3.29e-13 72.0
MS.gene068070.t1 MTR_0171s0030 24.566 346 211 13 109 427 16 338 4.10e-13 71.2
MS.gene068070.t1 MTR_5g094550 22.049 449 291 18 7 428 5 421 5.22e-13 71.2
MS.gene068070.t1 MTR_8g091690 23.441 401 260 16 1 384 1 371 5.47e-13 71.2
MS.gene068070.t1 MTR_5g094660 22.520 373 233 16 80 428 80 420 5.90e-13 71.2
MS.gene068070.t1 MTR_4g089055 22.902 441 298 15 13 434 27 444 1.03e-12 70.5
MS.gene068070.t1 MTR_5g073250 21.868 439 288 16 15 428 13 421 1.09e-12 70.5
MS.gene068070.t1 MTR_8g080520 22.222 414 288 15 42 443 74 465 1.19e-12 70.5
MS.gene068070.t1 MTR_1g037370 21.346 431 284 12 25 432 21 419 1.23e-12 70.1
MS.gene068070.t1 MTR_5g094520 21.622 370 251 13 75 428 1 347 1.37e-12 69.7
MS.gene068070.t1 MTR_5g094560 21.681 452 289 19 7 428 5 421 1.57e-12 69.7
MS.gene068070.t1 MTR_4g078110 30.247 162 101 5 279 433 249 405 2.08e-12 69.3
MS.gene068070.t1 MTR_1g102390 34.737 95 59 1 40 134 40 131 2.26e-12 64.7
MS.gene068070.t1 MTR_5g018990 22.788 373 239 15 80 428 78 425 2.35e-12 69.3
MS.gene068070.t1 MTR_3g465300 21.767 464 315 19 10 448 19 459 2.76e-12 69.3
MS.gene068070.t1 MTR_3g057910 22.811 434 270 16 31 434 34 432 3.19e-12 68.9
MS.gene068070.t1 MTR_3g057800 22.038 422 272 16 38 434 39 428 3.62e-12 68.6
MS.gene068070.t1 MTR_0059s0170 24.074 378 238 14 80 433 78 430 4.15e-12 68.6
MS.gene068070.t1 MTR_5g094570 21.111 450 302 15 7 432 5 425 4.29e-12 68.6
MS.gene068070.t1 MTR_4g089025 21.445 443 305 15 13 434 27 447 5.71e-12 68.2
MS.gene068070.t1 MTR_5g095220 22.796 329 207 14 123 433 99 398 6.03e-12 67.8
MS.gene068070.t1 MTR_5g045250 23.514 370 254 13 85 443 105 456 6.44e-12 67.8
MS.gene068070.t1 MTR_4g077210 22.102 371 250 12 76 426 71 422 6.83e-12 67.8
MS.gene068070.t1 MTR_8g468780 20.879 364 258 12 80 427 6 355 7.03e-12 67.8
MS.gene068070.t1 MTR_4g048580 21.823 417 270 16 43 435 46 430 9.10e-12 67.4
MS.gene068070.t1 MTR_7g087520 22.133 375 250 15 75 425 72 428 9.68e-12 67.4
MS.gene068070.t1 MTR_2g023680 23.485 396 242 14 76 446 99 458 1.12e-11 67.4
MS.gene068070.t1 MTR_2g010320 26.857 175 116 3 264 427 251 424 1.28e-11 67.0
MS.gene068070.t1 MTR_1g035140 23.238 383 233 15 80 433 78 428 1.99e-11 66.2
MS.gene068070.t1 MTR_3g057980 20.044 459 292 19 1 428 3 417 2.12e-11 66.2
MS.gene068070.t1 MTR_6g042610 21.882 457 310 15 6 432 3 442 2.25e-11 66.2
MS.gene068070.t1 MTR_2g061200 21.809 376 251 13 114 465 133 489 2.43e-11 66.2
MS.gene068070.t1 MTR_0608s0010 22.222 378 249 12 12 376 8 353 2.54e-11 65.5
MS.gene068070.t1 MTR_3g058060 22.581 372 248 12 80 432 79 429 2.54e-11 66.2
MS.gene068070.t1 MTR_3g058000 22.872 376 243 14 80 432 79 430 3.17e-11 65.9
MS.gene068070.t1 MTR_2g055430 22.590 363 230 14 85 425 108 441 3.66e-11 65.5
MS.gene068070.t1 MTR_0022s0290 23.725 451 295 16 10 433 16 444 3.71e-11 65.5
MS.gene068070.t1 MTR_6g084040 28.125 160 78 4 42 191 33 165 4.78e-11 62.0
MS.gene068070.t1 MTR_2g072270 22.162 370 240 12 76 425 105 446 5.04e-11 65.1
MS.gene068070.t1 MTR_4g109470 22.958 453 283 19 15 433 11 431 5.11e-11 65.1
MS.gene068070.t1 MTR_4g113650 23.184 358 235 12 85 425 108 442 6.14e-11 65.1
MS.gene068070.t1 MTR_6g008650 24.062 453 292 18 12 432 16 448 8.07e-11 64.7
MS.gene068070.t1 MTR_2g437840 22.917 192 134 5 248 433 238 421 8.29e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene068070.t1 AT3G56630 61.631 417 154 4 36 450 28 440 0.0 546
MS.gene068070.t1 AT1G34540 60.047 423 163 5 30 450 22 440 0.0 533
MS.gene068070.t1 AT3G48520 46.396 444 222 6 14 450 8 442 3.32e-128 381
MS.gene068070.t1 AT5G63450 47.826 414 202 6 42 450 41 445 4.79e-118 355
MS.gene068070.t1 AT5G63450 47.826 414 202 6 42 450 99 503 1.90e-117 356
MS.gene068070.t1 AT2G27690 44.924 394 201 8 60 450 54 434 1.02e-115 349
MS.gene068070.t1 AT5G23190 42.431 469 236 13 2 450 29 483 1.03e-112 343
MS.gene068070.t1 AT5G08250 43.261 460 221 14 16 450 37 481 2.18e-112 342
MS.gene068070.t1 AT3G01900 41.920 427 231 8 30 450 18 433 3.82e-112 340
MS.gene068070.t1 AT5G08250 44.186 430 207 12 41 450 3 419 1.06e-110 336
MS.gene068070.t1 AT1G63710 40.529 454 242 11 14 450 8 450 1.20e-106 327
MS.gene068070.t1 AT2G45510 40.487 452 239 12 13 450 15 450 1.21e-105 323
MS.gene068070.t1 AT1G01600 42.488 426 218 11 24 427 16 436 1.14e-104 322
MS.gene068070.t1 AT4G00360 41.163 447 235 13 24 450 16 454 1.97e-103 319
MS.gene068070.t1 AT2G45970 40.870 460 243 13 10 450 4 453 2.87e-102 316
MS.gene068070.t1 AT1G24540 40.000 460 243 10 10 450 18 463 1.90e-101 313
MS.gene068070.t1 AT2G44890 40.177 453 240 13 12 450 15 450 4.06e-101 312
MS.gene068070.t1 AT1G13140 39.427 454 247 11 16 450 23 467 2.98e-100 310
MS.gene068070.t1 AT5G58860 38.395 461 245 12 10 450 10 451 2.17e-99 308
MS.gene068070.t1 AT1G69500 39.474 456 221 12 36 450 25 466 7.35e-98 304
MS.gene068070.t1 AT2G44890 39.450 436 240 11 13 437 15 437 2.27e-96 299
MS.gene068070.t1 AT1G13140 37.472 451 234 11 16 450 23 441 2.50e-89 281
MS.gene068070.t1 AT3G26125 37.443 438 234 11 42 450 49 475 1.26e-88 281
MS.gene068070.t1 AT1G13150 37.385 436 241 9 36 450 36 460 9.75e-87 275
MS.gene068070.t1 AT2G23180 35.385 455 264 9 16 450 11 455 8.36e-83 265
MS.gene068070.t1 AT2G21910 34.884 430 252 10 42 454 35 453 3.72e-76 247
MS.gene068070.t1 AT4G39480 36.784 454 253 11 20 450 14 456 8.61e-76 246
MS.gene068070.t1 AT1G65340 34.266 429 243 11 42 450 37 446 2.75e-74 242
MS.gene068070.t1 AT4G39490 33.188 458 267 11 20 450 14 459 3.23e-74 242
MS.gene068070.t1 AT1G57750 34.590 451 254 11 18 450 12 439 3.26e-74 242
MS.gene068070.t1 AT1G57750 34.932 438 246 10 18 435 12 430 4.30e-74 239
MS.gene068070.t1 AT5G52320 32.731 443 264 11 25 450 20 445 5.32e-72 236
MS.gene068070.t1 AT5G52320 32.731 443 264 11 25 450 20 445 5.71e-72 236
MS.gene068070.t1 AT4G39510 34.105 475 270 14 12 464 11 464 6.26e-72 236
MS.gene068070.t1 AT1G47620 33.115 459 277 12 10 450 12 458 1.20e-71 236
MS.gene068070.t1 AT4G39500 34.211 456 257 12 18 450 24 459 2.26e-69 229
MS.gene068070.t1 AT4G32170 33.407 455 267 14 13 450 11 446 8.92e-69 228
MS.gene068070.t1 AT4G39500 34.360 422 244 10 48 450 2 409 7.10e-66 219
MS.gene068070.t1 AT5G02900 31.290 473 252 16 19 465 13 438 3.31e-60 204
MS.gene068070.t1 AT3G53130 25.758 396 257 15 80 458 117 492 4.32e-29 120
MS.gene068070.t1 AT1G31800 23.729 354 242 10 85 426 153 490 7.92e-24 105
MS.gene068070.t1 AT2G24180 26.570 414 267 16 31 428 32 424 1.07e-21 98.2
MS.gene068070.t1 AT5G24950 24.265 408 257 17 43 428 40 417 5.60e-21 95.9
MS.gene068070.t1 AT4G13310 27.518 407 254 14 43 432 40 422 8.81e-21 95.5
MS.gene068070.t1 AT3G48300 24.876 402 263 14 43 432 37 411 9.36e-21 95.1
MS.gene068070.t1 AT4G15110 22.372 371 247 9 85 427 124 481 9.37e-21 95.5
MS.gene068070.t1 AT3G48300 24.876 402 263 14 43 432 39 413 9.45e-21 95.1
MS.gene068070.t1 AT4G13770 21.609 435 308 14 13 432 8 424 1.08e-20 95.1
MS.gene068070.t1 AT5G52400 25.758 396 241 15 85 459 115 478 3.09e-20 94.0
MS.gene068070.t1 AT5G25140 23.608 449 288 16 16 435 1 423 3.77e-20 93.6
MS.gene068070.t1 AT3G14640 24.021 383 236 12 85 446 128 476 2.25e-19 91.3
MS.gene068070.t1 AT3G48270 24.688 401 265 14 43 432 39 413 2.41e-19 90.9
MS.gene068070.t1 AT3G14640 24.021 383 236 12 85 446 106 454 2.53e-19 90.9
MS.gene068070.t1 AT5G05260 22.222 414 290 12 38 430 43 445 4.70e-19 90.1
MS.gene068070.t1 AT2G30770 23.350 394 277 10 43 428 41 417 8.01e-18 86.3
MS.gene068070.t1 AT5G57260 23.243 370 265 9 74 432 64 425 2.60e-17 84.7
MS.gene068070.t1 AT3G48280 24.107 448 274 19 12 432 5 413 3.48e-17 84.3
MS.gene068070.t1 AT3G14650 23.773 387 240 13 80 446 101 452 3.91e-17 84.3
MS.gene068070.t1 AT4G31500 22.936 436 296 14 12 428 3 417 4.22e-17 84.0
MS.gene068070.t1 AT3G14630 24.084 382 231 14 76 435 93 437 1.03e-16 82.8
MS.gene068070.t1 AT3G48310 22.277 404 271 14 43 432 40 414 1.52e-16 82.4
MS.gene068070.t1 AT3G14630 24.084 382 231 14 76 435 148 492 1.60e-16 82.4
MS.gene068070.t1 AT2G22330 23.515 404 279 12 42 428 65 455 1.74e-16 82.4
MS.gene068070.t1 AT4G13290 24.000 400 261 13 43 428 41 411 1.74e-16 82.0
MS.gene068070.t1 AT2G22330 23.515 404 279 12 42 428 88 478 2.09e-16 82.0
MS.gene068070.t1 AT3G26190 24.764 424 277 14 31 433 24 426 2.54e-16 81.6
MS.gene068070.t1 AT3G26200 26.398 322 206 10 123 428 113 419 2.99e-16 81.6
MS.gene068070.t1 AT3G14660 23.773 387 240 13 80 446 101 452 3.01e-16 81.6
MS.gene068070.t1 AT4G39950 22.705 414 290 13 32 428 53 453 5.14e-16 80.9
MS.gene068070.t1 AT4G39950 22.705 414 290 13 32 428 93 493 5.51e-16 80.9
MS.gene068070.t1 AT3G44250 26.247 381 243 13 74 433 62 425 5.73e-16 80.5
MS.gene068070.t1 AT3G14690 24.806 387 236 14 80 446 101 452 5.89e-16 80.5
MS.gene068070.t1 AT3G14690 24.806 387 236 14 80 446 136 487 6.93e-16 80.5
MS.gene068070.t1 AT5G25130 22.148 447 298 16 11 435 5 423 5.35e-15 77.4
MS.gene068070.t1 AT5G25120 21.826 449 296 17 16 435 1 423 1.27e-14 76.3
MS.gene068070.t1 AT2G45560 23.438 448 290 17 14 432 9 432 1.39e-14 76.3
MS.gene068070.t1 AT2G23190 24.541 436 284 18 11 426 49 459 1.52e-14 76.3
MS.gene068070.t1 AT1G74110 25.304 411 257 16 43 427 71 457 2.06e-14 75.9
MS.gene068070.t1 AT1G13110 24.283 453 300 17 3 435 4 433 2.29e-14 75.5
MS.gene068070.t1 AT1G58260 21.924 447 309 14 7 428 6 437 4.98e-14 74.7
MS.gene068070.t1 AT5G07990 23.714 447 300 20 13 440 8 432 5.69e-14 74.3
MS.gene068070.t1 AT1G33730 23.642 313 207 10 143 443 15 307 6.73e-14 73.6
MS.gene068070.t1 AT1G33730 23.642 313 207 10 143 443 15 307 6.73e-14 73.6
MS.gene068070.t1 AT5G25180 22.098 448 296 16 11 434 4 422 1.05e-13 73.6
MS.gene068070.t1 AT5G10600 23.144 458 277 19 11 433 22 439 1.12e-13 73.6
MS.gene068070.t1 AT3G14610 23.575 386 251 14 76 446 96 452 1.47e-13 73.2
MS.gene068070.t1 AT3G48290 20.442 362 252 11 80 428 73 411 1.87e-13 72.8
MS.gene068070.t1 AT5G10610 24.201 438 287 18 18 433 9 423 2.00e-13 72.8
MS.gene068070.t1 AT3G53280 24.941 425 261 14 31 428 24 417 2.57e-13 72.4
MS.gene068070.t1 AT1G13090 23.821 424 284 16 31 435 24 427 3.13e-13 72.0
MS.gene068070.t1 AT3G14620 21.649 388 260 15 56 428 83 441 3.95e-13 71.6
MS.gene068070.t1 AT5G06900 24.176 364 240 14 80 426 74 418 4.09e-13 71.6
MS.gene068070.t1 AT3G48320 23.077 442 293 17 9 432 2 414 4.91e-13 71.6
MS.gene068070.t1 AT2G30750 23.678 397 272 11 43 428 41 417 1.15e-12 70.5
MS.gene068070.t1 AT3G26320 24.848 330 209 14 123 433 116 425 1.27e-12 70.1
MS.gene068070.t1 AT5G42590 24.069 403 264 14 43 428 40 417 2.46e-12 69.3
MS.gene068070.t1 AT4G13310 26.133 375 230 15 43 394 40 390 3.58e-12 68.2
MS.gene068070.t1 AT3G26330 23.404 329 215 14 122 433 115 423 4.81e-12 68.6
MS.gene068070.t1 AT2G45570 23.636 385 237 16 80 433 78 436 5.28e-12 68.2
MS.gene068070.t1 AT1G11610 22.335 394 281 10 43 428 41 417 6.72e-12 67.8
MS.gene068070.t1 AT1G11610 22.335 394 281 10 43 428 41 417 7.70e-12 67.8
MS.gene068070.t1 AT3G14660 27.570 214 117 7 240 435 102 295 7.95e-12 67.0
MS.gene068070.t1 AT1G16410 20.430 465 328 14 12 448 16 466 1.04e-11 67.4
MS.gene068070.t1 AT5G36220 25.000 308 208 12 127 426 129 421 1.25e-11 67.0
MS.gene068070.t1 AT5G35715 22.520 373 254 13 75 428 1 357 1.27e-11 67.0
MS.gene068070.t1 AT3G48290 31.405 121 77 2 309 428 322 437 1.97e-11 66.6
MS.gene068070.t1 AT4G15360 23.529 340 211 14 117 433 119 432 2.47e-11 66.2
MS.gene068070.t1 AT4G37310 21.807 321 225 10 127 433 122 430 4.17e-11 65.5
MS.gene068070.t1 AT5G38450 23.077 325 219 7 115 426 137 443 6.65e-11 64.7
MS.gene068070.t1 AT2G40890 22.222 441 303 13 10 432 2 420 7.93e-11 64.7
MS.gene068070.t1 AT3G26280 22.454 432 296 15 20 432 17 428 8.75e-11 64.3
MS.gene068070.t1 AT2G27010 22.426 272 192 8 163 427 143 402 9.79e-11 64.3

Find 84 sgRNAs with CRISPR-Local

Find 147 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGATGTCTAACCACCTTTC+AGG 0.193809 7.3:+21050649 None:intergenic
TGAGAGTCCGTTTAAGTTTC+CGG 0.195011 7.3:-21050599 MS.gene068070:CDS
CTGTTTCGACAGTTACATTT+TGG 0.219131 7.3:+21051463 None:intergenic
TTGATGAACCTTTCACCTTT+TGG 0.244743 7.3:+21051603 None:intergenic
AACCTTCTTCAAGACTTTCT+TGG 0.266189 7.3:-21051582 MS.gene068070:CDS
GTAATAAGCTTTATTCTTGC+TGG 0.293570 7.3:-21051018 MS.gene068070:CDS
CGGTGTTGGTAGGGCAGTTT+CGG 0.312248 7.3:+21051718 None:intergenic
TTAACTCTGATGGTGATCTT+TGG 0.325827 7.3:-21051548 MS.gene068070:CDS
TGGCGGTTTAATATGAATTC+AGG 0.346108 7.3:+21051771 None:intergenic
TGGGGAGAATGGAGAGTGTA+TGG 0.347414 7.3:-21050696 MS.gene068070:CDS
AAATGAGATCATCGACTTGC+AGG 0.351661 7.3:-21051400 MS.gene068070:CDS
ATGAGGATGAGATATGATTC+AGG 0.368043 7.3:+21051894 None:intergenic
GTTCGCCCCGGCAAAATTCA+TGG 0.373088 7.3:-21051687 MS.gene068070:CDS
TGAGAGAATTTGAATGAGTC+TGG 0.389124 7.3:+21051437 None:intergenic
GAACTAGGATTATGAAAGGT+TGG 0.396953 7.3:-21050744 MS.gene068070:CDS
AAACATGCCTTTGTATCAAC+CGG 0.407908 7.3:+21050790 None:intergenic
TCTTATCATACTTATGCTAT+GGG 0.408385 7.3:-21050715 MS.gene068070:CDS
TTCTTATCATACTTATGCTA+TGG 0.409074 7.3:-21050716 MS.gene068070:CDS
CTTCAAGACTTTCTTGGTAC+AGG 0.415452 7.3:-21051576 MS.gene068070:CDS
GGCTGCACAATGACGATGTT+TGG 0.418136 7.3:-21050886 MS.gene068070:CDS
ATCTTCAAGAAATGATGTTA+AGG 0.422979 7.3:-21050950 MS.gene068070:CDS
CTTGGAGGCAACGGCACCAC+TGG 0.427189 7.3:-21051312 MS.gene068070:CDS
TGAAACACCGGAAACTTAAA+CGG 0.429191 7.3:+21050592 None:intergenic
TACTTATGCTATGGGGAGAA+TGG 0.442604 7.3:-21050707 MS.gene068070:CDS
GAAAGAGAAAGGAGAGGATG+AGG 0.443425 7.3:+21051877 None:intergenic
GACGCCGCCATGTTAAGTTC+TGG 0.453179 7.3:-21051261 MS.gene068070:CDS
TTCATAATCCTAGTTCCATC+TGG 0.455090 7.3:+21050751 None:intergenic
GGGGAGAATGGAGAGTGTAT+GGG 0.457545 7.3:-21050695 MS.gene068070:CDS
TTCAAAATCTACCCTCTACT+TGG 0.457655 7.3:-21051801 MS.gene068070:CDS
GACGTTGATCCTGGATGTCT+TGG 0.465429 7.3:-21051330 MS.gene068070:CDS
GATTTATTATCTCGCTTCAT+CGG 0.473264 7.3:-21051078 MS.gene068070:CDS
GCCTTTGTATCAACCGGCAC+TGG 0.484166 7.3:+21050796 None:intergenic
CTACTTCGTCTGCTTTGAGT+TGG 0.486009 7.3:-21050987 MS.gene068070:CDS
GTGTTGTCCATTCGAGAAAA+CGG 0.492760 7.3:+21051748 None:intergenic
AAGTTTCCGGTGTTTCATGC+AGG 0.494092 7.3:-21050586 MS.gene068070:intron
ACAAAGATGGCGGTGTTGGT+AGG 0.496237 7.3:+21051708 None:intergenic
CAAAGATGGCGGTGTTGGTA+GGG 0.500663 7.3:+21051709 None:intergenic
TTTGCCGGGGCGAACAAAGA+TGG 0.507535 7.3:+21051695 None:intergenic
GCTAAAGAGTCTCCCACAAA+AGG 0.513619 7.3:-21051105 MS.gene068070:CDS
GTTTGGATATGAAGAGTTGA+AGG 0.514398 7.3:-21050869 MS.gene068070:CDS
GCGAACAAAGATGGCGGTGT+TGG 0.514884 7.3:+21051704 None:intergenic
AGTTTGCTGATGAGATCATA+AGG 0.523620 7.3:-21051140 MS.gene068070:CDS
ACCGCCATCTTTGTTCGCCC+CGG 0.524198 7.3:-21051699 MS.gene068070:CDS
GTAGAGGTAGAGAAAGAGAA+AGG 0.524749 7.3:+21051866 None:intergenic
TGAGATCATAAGGTCAAGAA+TGG 0.526847 7.3:-21051130 MS.gene068070:CDS
CATAAAAGCAGCGGCTCCAG+TGG 0.532838 7.3:+21051296 None:intergenic
CGGAACAGAAGAAGCTTCAC+CGG 0.534789 7.3:-21051058 MS.gene068070:CDS
TCCAGTGCCGGTTGATACAA+AGG 0.538300 7.3:-21050797 MS.gene068070:CDS
ACAGGAATCTTTAACTCTGA+TGG 0.538842 7.3:-21051558 MS.gene068070:CDS
GTTTAATATGAATTCAGGTA+AGG 0.538983 7.3:+21051776 None:intergenic
AAATTCGAAAACTATCCAAA+AGG 0.543013 7.3:-21051618 MS.gene068070:CDS
GGGAGAATGGAGAGTGTATG+GGG 0.544960 7.3:-21050694 MS.gene068070:CDS
CGTGTTGAATTCGTAGGTGG+CGG 0.547651 7.3:+21051509 None:intergenic
AGATTTCGTGTTGAATTCGT+AGG 0.550683 7.3:+21051503 None:intergenic
CCGTTGCCTCCAAGACATCC+AGG 0.552632 7.3:+21051321 None:intergenic
GTTGATCCTGGATGTCTTGG+AGG 0.561737 7.3:-21051327 MS.gene068070:CDS
GTAATGAATTTAAACCTGAA+AGG 0.562107 7.3:-21050663 MS.gene068070:CDS
TACCAAGAAAGTCTTGAAGA+AGG 0.569008 7.3:+21051580 None:intergenic
CCTGGATGTCTTGGAGGCAA+CGG 0.569963 7.3:-21051321 MS.gene068070:CDS
GAAACAATACGTTTAAAGAG+TGG 0.576075 7.3:-21050907 MS.gene068070:CDS
AAAACTATCCAAAAGGTGAA+AGG 0.578197 7.3:-21051611 MS.gene068070:CDS
CAGGTAAGGCTCCAAGTAGA+GGG 0.579566 7.3:+21051790 None:intergenic
TGGTTAGACATCGATAAAGA+TGG 0.582481 7.3:-21050640 MS.gene068070:CDS
TCCATTCGAGAAAACGGTGG+CGG 0.584465 7.3:+21051754 None:intergenic
TGGTGAAGAAATGAAAGTAG+AGG 0.587865 7.3:+21051850 None:intergenic
TTTGTATCAACCGGCACTGG+AGG 0.589361 7.3:+21050799 None:intergenic
TCAGGTAAGGCTCCAAGTAG+AGG 0.592116 7.3:+21051789 None:intergenic
TGTTGGTAGGGCAGTTTCGG+AGG 0.593583 7.3:+21051721 None:intergenic
GGTAGAGAAAGAGAAAGGAG+AGG 0.596474 7.3:+21051871 None:intergenic
TTTCGTGTTGAATTCGTAGG+TGG 0.602013 7.3:+21051506 None:intergenic
GAGACTGTATCCTCCAGTGC+CGG 0.602221 7.3:-21050809 MS.gene068070:CDS
CTTATCATACTTATGCTATG+GGG 0.606782 7.3:-21050714 MS.gene068070:CDS
ATGAATTTAAACCTGAAAGG+TGG 0.607646 7.3:-21050660 MS.gene068070:CDS
AGGATACAGTCTCATTGCCT+CGG 0.613723 7.3:+21050819 None:intergenic
CCGCCATGTTAAGTTCTGGA+AGG 0.615423 7.3:-21051257 MS.gene068070:CDS
GATGGAACTAGGATTATGAA+AGG 0.619406 7.3:-21050748 MS.gene068070:CDS
TGAGAAGCAGAAGAGTTGCA+TGG 0.620519 7.3:+21051917 None:intergenic
CTAGGACCTGCATGAAACAC+CGG 0.629760 7.3:+21050580 None:intergenic
AAACGCCGCCATAAAAGCAG+CGG 0.648353 7.3:+21051287 None:intergenic
GCCGGGGCGAACAAAGATGG+CGG 0.659874 7.3:+21051698 None:intergenic
GAACCTTCCAGAACTTAACA+TGG 0.662194 7.3:+21051254 None:intergenic
TTTGCATGCAGCGATAACCG+AGG 0.682994 7.3:-21050836 MS.gene068070:CDS
TTGTCCATTCGAGAAAACGG+TGG 0.737250 7.3:+21051751 None:intergenic
CCTTCCAGAACTTAACATGG+CGG 0.752822 7.3:+21051257 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTGTAAAAAAAAAATATG+TGG - chr7.3:21051752-21051771 MS.gene068070:CDS 10.0%
!! TTTGTAAAAAAAAAATATGT+GGG - chr7.3:21051753-21051772 MS.gene068070:CDS 10.0%
!! TTGTAAAAAAAAAATATGTG+GGG - chr7.3:21051754-21051773 MS.gene068070:CDS 15.0%
!!! AACTACTTAATTTTCAATTT+TGG + chr7.3:21051643-21051662 None:intergenic 15.0%
!! TCAAAAAAACACATCAAATA+TGG - chr7.3:21050033-21050052 MS.gene068070:intron 20.0%
!!! AATTTTCAATTTTGGTAAAC+TGG + chr7.3:21051635-21051654 None:intergenic 20.0%
!!! ATATTTGATGTGTTTTTTTG+AGG + chr7.3:21050034-21050053 None:intergenic 20.0%
! AAATTCGAAAACTATCCAAA+AGG - chr7.3:21050240-21050259 MS.gene068070:intron 25.0%
! ATCTTCAAGAAATGATGTTA+AGG - chr7.3:21050908-21050927 MS.gene068070:CDS 25.0%
! ATTCAAGATGAACATAAGTT+TGG + chr7.3:21051825-21051844 None:intergenic 25.0%
! GTAATGAATTTAAACCTGAA+AGG - chr7.3:21051195-21051214 MS.gene068070:CDS 25.0%
! GTTTAATATGAATTCAGGTA+AGG + chr7.3:21050085-21050104 None:intergenic 25.0%
! TCTTATCATACTTATGCTAT+GGG - chr7.3:21051143-21051162 MS.gene068070:CDS 25.0%
! TTCTTATCATACTTATGCTA+TGG - chr7.3:21051142-21051161 MS.gene068070:CDS 25.0%
!! AATAAATCTTCACCTTTTGT+GGG + chr7.3:21050768-21050787 None:intergenic 25.0%
!! TAATAAATCTTCACCTTTTG+TGG + chr7.3:21050769-21050788 None:intergenic 25.0%
!! TTCTTCATTTTCCATAAGAA+TGG + chr7.3:21050642-21050661 None:intergenic 25.0%
!! TTTTGGATAGTTTTCGAATT+TGG + chr7.3:21050241-21050260 None:intergenic 25.0%
!!! TGACTTTGAGATTGAAAAAT+GGG - chr7.3:21051420-21051439 MS.gene068070:CDS 25.0%
!!! TTGACTTTGAGATTGAAAAA+TGG - chr7.3:21051419-21051438 MS.gene068070:CDS 25.0%
AAAACTATCCAAAAGGTGAA+AGG - chr7.3:21050247-21050266 MS.gene068070:intron 30.0%
AATGTGTTTAGGGAAAGAAA+TGG - chr7.3:21051301-21051320 MS.gene068070:CDS 30.0%
ACAATATCACGTAAAAACTC+CGG + chr7.3:21050822-21050841 None:intergenic 30.0%
ACACAATTGCTGATCTAAAA+TGG - chr7.3:21051561-21051580 MS.gene068070:CDS 30.0%
ATGAATTTAAACCTGAAAGG+TGG - chr7.3:21051198-21051217 MS.gene068070:CDS 30.0%
ATGTTCATCTTGAATATTGC+TGG - chr7.3:21051830-21051849 MS.gene068070:CDS 30.0%
CTTATCATACTTATGCTATG+GGG - chr7.3:21051144-21051163 MS.gene068070:CDS 30.0%
GAAACAATACGTTTAAAGAG+TGG - chr7.3:21050951-21050970 MS.gene068070:CDS 30.0%
GATTTATTATCTCGCTTCAT+CGG - chr7.3:21050780-21050799 MS.gene068070:CDS 30.0%
! AATGAAGAAGATTTTCAACG+TGG - chr7.3:21050653-21050672 MS.gene068070:CDS 30.0%
! AATGGAAGTTTAGGATCATA+AGG - chr7.3:21051579-21051598 MS.gene068070:CDS 30.0%
! AGAATGTGTTGTATGTTTTC+AGG + chr7.3:21050213-21050232 None:intergenic 30.0%
! ATGAAGAAGATTTTCAACGT+GGG - chr7.3:21050654-21050673 MS.gene068070:CDS 30.0%
! CTGATCTAAAATGGAAGTTT+AGG - chr7.3:21051570-21051589 MS.gene068070:CDS 30.0%
! GAATGTGTTGTATGTTTTCA+GGG + chr7.3:21050212-21050231 None:intergenic 30.0%
! TGAGTCTTTTTCCATTCTTA+TGG - chr7.3:21050628-21050647 MS.gene068070:CDS 30.0%
!! GTAATAAGCTTTATTCTTGC+TGG - chr7.3:21050840-21050859 MS.gene068070:CDS 30.0%
!!! GGCTGTTATTTTTCCATTAA+GGG - chr7.3:21051798-21051817 MS.gene068070:CDS 30.0%
!!! TGGCTGTTATTTTTCCATTA+AGG - chr7.3:21051797-21051816 MS.gene068070:CDS 30.0%
!!! TTTGATGTGTTTTTTTGAGG+TGG + chr7.3:21050031-21050050 None:intergenic 30.0%
AAACATGCCTTTGTATCAAC+CGG + chr7.3:21051071-21051090 None:intergenic 35.0%
AACCTTCTTCAAGACTTTCT+TGG - chr7.3:21050276-21050295 MS.gene068070:intron 35.0%
AATGAAGTCTATTGCAGCTT+CGG - chr7.3:21051334-21051353 MS.gene068070:CDS 35.0%
ACAGGAATCTTTAACTCTGA+TGG - chr7.3:21050300-21050319 MS.gene068070:intron 35.0%
ACATAAGTTTGGTCCCTTAA+TGG + chr7.3:21051814-21051833 None:intergenic 35.0%
AGATTTCGTGTTGAATTCGT+AGG + chr7.3:21050358-21050377 None:intergenic 35.0%
ATGAGGATGAGATATGATTC+AGG + chr7.3:21049967-21049986 None:intergenic 35.0%
GAACTAGGATTATGAAAGGT+TGG - chr7.3:21051114-21051133 MS.gene068070:CDS 35.0%
GATGGAACTAGGATTATGAA+AGG - chr7.3:21051110-21051129 MS.gene068070:CDS 35.0%
GTCAAAGACAAAACATGTTC+AGG + chr7.3:21051404-21051423 None:intergenic 35.0%
GTTTGGATATGAAGAGTTGA+AGG - chr7.3:21050989-21051008 MS.gene068070:CDS 35.0%
TACCAAGAAAGTCTTGAAGA+AGG + chr7.3:21050281-21050300 None:intergenic 35.0%
TATGTGAGTGTGTGTATGTA+TGG - chr7.3:21051777-21051796 MS.gene068070:CDS 35.0%
TCATCAGTGTTACATTGTTC+TGG + chr7.3:21051887-21051906 None:intergenic 35.0%
TCTTTCCCTAAACACATTCT+AGG + chr7.3:21051299-21051318 None:intergenic 35.0%
TGAAACACCGGAAACTTAAA+CGG + chr7.3:21051269-21051288 None:intergenic 35.0%
TGAATGTGAGTGTAAGGTAA+GGG - chr7.3:21051450-21051469 MS.gene068070:CDS 35.0%
TGAGAGAATTTGAATGAGTC+TGG + chr7.3:21050424-21050443 None:intergenic 35.0%
TGAGATCATAAGGTCAAGAA+TGG - chr7.3:21050728-21050747 MS.gene068070:CDS 35.0%
TGGCGGTTTAATATGAATTC+AGG + chr7.3:21050090-21050109 None:intergenic 35.0%
TGGTGAAGAAATGAAAGTAG+AGG + chr7.3:21050011-21050030 None:intergenic 35.0%
TGGTTAGACATCGATAAAGA+TGG - chr7.3:21051218-21051237 MS.gene068070:CDS 35.0%
TTCAAAATCTACCCTCTACT+TGG - chr7.3:21050057-21050076 MS.gene068070:intron 35.0%
TTCATAATCCTAGTTCCATC+TGG + chr7.3:21051110-21051129 None:intergenic 35.0%
! AAAAAGCATGATGTTCCCAT+TGG + chr7.3:21051856-21051875 None:intergenic 35.0%
! AAGGTTTGAAGGTGTAAAGT+TGG - chr7.3:21051480-21051499 MS.gene068070:CDS 35.0%
! AAGGTTTGAGATTGTTGCTT+TGG - chr7.3:21051364-21051383 MS.gene068070:CDS 35.0%
! AGGTTTGAAGGTGTAAAGTT+GGG - chr7.3:21051481-21051500 MS.gene068070:CDS 35.0%
! ATGTTTTACCAGATGGAACT+AGG - chr7.3:21051099-21051118 MS.gene068070:CDS 35.0%
! CTGTTTCGACAGTTACATTT+TGG + chr7.3:21050398-21050417 None:intergenic 35.0%
! TATGATGCCATGAATTTTGC+CGG + chr7.3:21050181-21050200 None:intergenic 35.0%
! TTAACTCTGATGGTGATCTT+TGG - chr7.3:21050310-21050329 MS.gene068070:intron 35.0%
! TTGATGAACCTTTCACCTTT+TGG + chr7.3:21050258-21050277 None:intergenic 35.0%
!! AGTTTGCTGATGAGATCATA+AGG - chr7.3:21050718-21050737 MS.gene068070:CDS 35.0%
!!! ACTTGCAGGATGTTTTAGAA+CGG - chr7.3:21050472-21050491 MS.gene068070:intron 35.0%
CAGGTCCTAGAATGTGTTTA+GGG - chr7.3:21051291-21051310 MS.gene068070:CDS 40.0%
CTTCAAGACTTTCTTGGTAC+AGG - chr7.3:21050282-21050301 MS.gene068070:intron 40.0%
CTTGAATATTGCTGGCCAAT+GGG - chr7.3:21051838-21051857 MS.gene068070:CDS 40.0%
GAACCTTCCAGAACTTAACA+TGG + chr7.3:21050607-21050626 None:intergenic 40.0%
GTAGAGGTAGAGAAAGAGAA+AGG + chr7.3:21049995-21050014 None:intergenic 40.0%
GTGAATGTGAGTGTAAGGTA+AGG - chr7.3:21051449-21051468 MS.gene068070:CDS 40.0%
GTGTTGTCCATTCGAGAAAA+CGG + chr7.3:21050113-21050132 None:intergenic 40.0%
TACCTTACACTCACATTCAC+AGG + chr7.3:21051449-21051468 None:intergenic 40.0%
TACTTATGCTATGGGGAGAA+TGG - chr7.3:21051151-21051170 MS.gene068070:CDS 40.0%
TCTTGAATATTGCTGGCCAA+TGG - chr7.3:21051837-21051856 MS.gene068070:CDS 40.0%
TTTCGTGTTGAATTCGTAGG+TGG + chr7.3:21050355-21050374 None:intergenic 40.0%
! AACGACGATGTTTTACCAGA+TGG - chr7.3:21051092-21051111 MS.gene068070:CDS 40.0%
! ATGATGCCATGAATTTTGCC+GGG + chr7.3:21050180-21050199 None:intergenic 40.0%
! TGAGAGTCCGTTTAAGTTTC+CGG - chr7.3:21051259-21051278 MS.gene068070:CDS 40.0%
! TTTTCAACGTGGGATCAGAA+CGG - chr7.3:21050664-21050683 MS.gene068070:CDS 40.0%
!! AAATGAGATCATCGACTTGC+AGG - chr7.3:21050458-21050477 MS.gene068070:intron 40.0%
!! GTGTTGTATGTTTTCAGGGT+TGG + chr7.3:21050208-21050227 None:intergenic 40.0%
!!! CTGCTTTGAGTTGGTTTTTC+TGG - chr7.3:21050880-21050899 MS.gene068070:CDS 40.0%
AAGTTTCCGGTGTTTCATGC+AGG - chr7.3:21051272-21051291 MS.gene068070:CDS 45.0%
AGGATACAGTCTCATTGCCT+CGG + chr7.3:21051042-21051061 None:intergenic 45.0%
AGGGAAAGGTGAAGGTTTGA+AGG - chr7.3:21051469-21051488 MS.gene068070:CDS 45.0%
CCTTCCAGAACTTAACATGG+CGG + chr7.3:21050604-21050623 None:intergenic 45.0%
GAAAGAGAAAGGAGAGGATG+AGG + chr7.3:21049984-21050003 None:intergenic 45.0%
GAAATGTGATCTGCTGCAAG+TGG - chr7.3:21051503-21051522 MS.gene068070:CDS 45.0%
GCAGGTCCTAGAATGTGTTT+AGG - chr7.3:21051290-21051309 MS.gene068070:CDS 45.0%
GCTAAAGAGTCTCCCACAAA+AGG - chr7.3:21050753-21050772 MS.gene068070:CDS 45.0%
GGTAGAGAAAGAGAAAGGAG+AGG + chr7.3:21049990-21050009 None:intergenic 45.0%
GTAAGGTAAGGGAAAGGTGA+AGG - chr7.3:21051461-21051480 MS.gene068070:CDS 45.0%
GTGAGTGTAAGGTAAGGGAA+AGG - chr7.3:21051455-21051474 MS.gene068070:CDS 45.0%
TCGATGTCTAACCACCTTTC+AGG + chr7.3:21051212-21051231 None:intergenic 45.0%
TGCCTGTGAATGTGAGTGTA+AGG - chr7.3:21051444-21051463 MS.gene068070:CDS 45.0%
TTGCAGCTTCGGTTATCGAA+AGG - chr7.3:21051345-21051364 MS.gene068070:CDS 45.0%
TTGTCCATTCGAGAAAACGG+TGG + chr7.3:21050110-21050129 None:intergenic 45.0%
! CTACTTCGTCTGCTTTGAGT+TGG - chr7.3:21050871-21050890 MS.gene068070:CDS 45.0%
! TGATGCCATGAATTTTGCCG+GGG + chr7.3:21050179-21050198 None:intergenic 45.0%
AAACGCCGCCATAAAAGCAG+CGG + chr7.3:21050574-21050593 None:intergenic 50.0%
CAGGTAAGGCTCCAAGTAGA+GGG + chr7.3:21050071-21050090 None:intergenic 50.0%
CGGAACAGAAGAAGCTTCAC+CGG - chr7.3:21050800-21050819 MS.gene068070:CDS 50.0%
CGTGTTGAATTCGTAGGTGG+CGG + chr7.3:21050352-21050371 None:intergenic 50.0%
CTAGGACCTGCATGAAACAC+CGG + chr7.3:21051281-21051300 None:intergenic 50.0%
GACGTTGATCCTGGATGTCT+TGG - chr7.3:21050528-21050547 MS.gene068070:intron 50.0%
GGCTGCACAATGACGATGTT+TGG - chr7.3:21050972-21050991 MS.gene068070:CDS 50.0%
GTTGATCCTGGATGTCTTGG+AGG - chr7.3:21050531-21050550 MS.gene068070:intron 50.0%
TCAGGTAAGGCTCCAAGTAG+AGG + chr7.3:21050072-21050091 None:intergenic 50.0%
TCCATTCGAGAAAACGGTGG+CGG + chr7.3:21050107-21050126 None:intergenic 50.0%
TTTGCATGCAGCGATAACCG+AGG - chr7.3:21051022-21051041 MS.gene068070:CDS 50.0%
! GGGAGAATGGAGAGTGTATG+GGG - chr7.3:21051164-21051183 MS.gene068070:CDS 50.0%
! GGGGAGAATGGAGAGTGTAT+GGG - chr7.3:21051163-21051182 MS.gene068070:CDS 50.0%
! TGGGGAGAATGGAGAGTGTA+TGG - chr7.3:21051162-21051181 MS.gene068070:CDS 50.0%
! TTTGTATCAACCGGCACTGG+AGG + chr7.3:21051062-21051081 None:intergenic 50.0%
!! ACAAAGATGGCGGTGTTGGT+AGG + chr7.3:21050153-21050172 None:intergenic 50.0%
!! CAAAGATGGCGGTGTTGGTA+GGG + chr7.3:21050152-21050171 None:intergenic 50.0%
!! CCGCCATGTTAAGTTCTGGA+AGG - chr7.3:21050601-21050620 MS.gene068070:CDS 50.0%
!! CTCGCTTTTGACGTTGATCC+TGG - chr7.3:21050519-21050538 MS.gene068070:intron 50.0%
!! TCCAGTGCCGGTTGATACAA+AGG - chr7.3:21051061-21051080 MS.gene068070:CDS 50.0%
CATAAAAGCAGCGGCTCCAG+TGG + chr7.3:21050565-21050584 None:intergenic 55.0%
CCTGGATGTCTTGGAGGCAA+CGG - chr7.3:21050537-21050556 MS.gene068070:intron 55.0%
GACGCCGCCATGTTAAGTTC+TGG - chr7.3:21050597-21050616 MS.gene068070:CDS 55.0%
GAGACTGTATCCTCCAGTGC+CGG - chr7.3:21051049-21051068 MS.gene068070:CDS 55.0%
GCCTTTGTATCAACCGGCAC+TGG + chr7.3:21051065-21051084 None:intergenic 55.0%
GTTCGCCCCGGCAAAATTCA+TGG - chr7.3:21050171-21050190 MS.gene068070:intron 55.0%
TTTGCCGGGGCGAACAAAGA+TGG + chr7.3:21050166-21050185 None:intergenic 55.0%
! ACCGCCACCGTTTTCTCGAA+TGG - chr7.3:21050103-21050122 MS.gene068070:intron 55.0%
! GCGAACAAAGATGGCGGTGT+TGG + chr7.3:21050157-21050176 None:intergenic 55.0%
! TGTTGGTAGGGCAGTTTCGG+AGG + chr7.3:21050140-21050159 None:intergenic 55.0%
!! CGGTGTTGGTAGGGCAGTTT+CGG + chr7.3:21050143-21050162 None:intergenic 55.0%
!!! CACTGGAGCCGCTGCTTTTA+TGG - chr7.3:21050563-21050582 MS.gene068070:intron 55.0%
!!! TGGAGCCGCTGCTTTTATGG+CGG - chr7.3:21050566-21050585 MS.gene068070:intron 55.0%
ACCGCCATCTTTGTTCGCCC+CGG - chr7.3:21050159-21050178 MS.gene068070:intron 60.0%
CCGTTGCCTCCAAGACATCC+AGG + chr7.3:21050540-21050559 None:intergenic 60.0%
CTTGGAGGCAACGGCACCAC+TGG - chr7.3:21050546-21050565 MS.gene068070:intron 65.0%
GCCGGGGCGAACAAAGATGG+CGG + chr7.3:21050163-21050182 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 21049943 21051937 21049943 ID=MS.gene068070
chr7.3 mRNA 21049943 21051937 21049943 ID=MS.gene068070.t1;Parent=MS.gene068070
chr7.3 exon 21050587 21051937 21050587 ID=MS.gene068070.t1.exon1;Parent=MS.gene068070.t1
chr7.3 CDS 21050587 21051937 21050587 ID=cds.MS.gene068070.t1;Parent=MS.gene068070.t1
chr7.3 exon 21049943 21049992 21049943 ID=MS.gene068070.t1.exon2;Parent=MS.gene068070.t1
chr7.3 CDS 21049943 21049992 21049943 ID=cds.MS.gene068070.t1;Parent=MS.gene068070.t1
Gene Sequence

>MS.gene068070

ATGCAACTCTTCTGCTTCTCACCTGAATCATATCTCATCCTCATCCTCTCCTTTCTCTTTCTCTACCTCTACTTTCATTTCTTCACCACCTCAAAAAAACACATCAAATATGGCTTCAAAATCTACCCTCTACTTGGAGCCTTACCTGAATTCATATTAAACCGCCACCGTTTTCTCGAATGGACAACACAAGTCCTCCGAAACTGCCCTACCAACACCGCCATCTTTGTTCGCCCCGGCAAAATTCATGGCATCATAACAGCCAACCCTGAAAACATACAACACATTCTCAAAACCAAATTCGAAAACTATCCAAAAGGTGAAAGGTTCATCAACCTTCTTCAAGACTTTCTTGGTACAGGAATCTTTAACTCTGATGGTGATCTTTGGAAGCTTCAGAGAAAAACCGCCACCTACGAATTCAACACGAAATCTCTACGCAACTTCATCGTCCAAAATGTAACTGTCGAAACAGAAACCAGACTCATTCAAATTCTCTCAAAAGCAGCTGAGAAAAATGAGATCATCGACTTGCAGGATGTTTTAGAACGGTTTGCATTCGACAACGTTTGTAAACTCGCTTTTGACGTTGATCCTGGATGTCTTGGAGGCAACGGCACCACTGGAGCCGCTGCTTTTATGGCGGCGTTTGAAGACGCCGCCATGTTAAGTTCTGGAAGGTTCATGAGTCTTTTTCCATTCTTATGGAAAATGAAGAAGATTTTCAACGTGGGATCAGAACGGAGATTGAAAGAATCAATCACAACTGTTCATGAGTTTGCTGATGAGATCATAAGGTCAAGAATGGAAGCTAAAGAGTCTCCCACAAAAGGTGAAGATTTATTATCTCGCTTCATCGGAACAGAAGAAGCTTCACCGGAGTTTTTACGTGATATTGTAATAAGCTTTATTCTTGCTGGACGCGATACTACTTCGTCTGCTTTGAGTTGGTTTTTCTGGATTTTATCTTCAAGAAATGATGTTAAGGAAAAAATAATCAAAGAAATTGAAACAATACGTTTAAAGAGTGGCTGCACAATGACGATGTTTGGATATGAAGAGTTGAAGGAGATGCATTATTTGCATGCAGCGATAACCGAGGCAATGAGACTGTATCCTCCAGTGCCGGTTGATACAAAGGCATGTTTAAACGACGATGTTTTACCAGATGGAACTAGGATTATGAAAGGTTGGTTTATTTCTTATCATACTTATGCTATGGGGAGAATGGAGAGTGTATGGGGAAAAGATTGTAATGAATTTAAACCTGAAAGGTGGTTAGACATCGATAAAGATGGTGTTAGTGTGTGTCGAAGTGAGAGTCCGTTTAAGTTTCCGGTGTTTCATGCAGGTCCTAGAATGTGTTTAGGGAAAGAAATGGCTTATATTCAAATGAAGTCTATTGCAGCTTCGGTTATCGAAAGGTTTGAGATTGTTGCTTTGGAGAAAGATACTTGTCCTGAACATGTTTTGTCTTTGACTTTGAGATTGAAAAATGGGTTGCCTGTGAATGTGAGTGTAAGGTAAGGGAAAGGTGAAGGTTTGAAGGTGTAAAGTTGGGAAATGTGATCTGCTGCAAGTGGATAGTTGATGTGTAGATTGTAGATGTACACAAATCACACAATTGCTGATCTAAAATGGAAGTTTAGGATCATAAGGATTTGCATTTCAACTTTGTATTTTTTTAATCCAGTTTACCAAAATTGAAAATTAAGTAGTTTAATCTTGATCTATAGTTCATAATGTATGACTGTGTGAAATGCAAGATTACAAGTCTATAAGAAATACATATTTGAATCGAAGAGTAAGATTTGTAAAAAAAAAATATGTGGGGTATGTGAGTGTGTGTATGTATGGCTGTTATTTTTCCATTAAGGGACCAAACTTATGTTCATCTTGAATATTGCTGGCCAATGGGAACATCATGCTTTTTTTGTTCTGCCAGAACAATGTAACACTGATGAATACAAGAGTACTATAATCAAAGTAGACTAA

Protein sequence

>MS.gene068070.t1

MQLFCFSPESYLILILSFLFLYLYFHFFTTSKKHIKYGFKIYPLLGALPEFILNRHRFLEWTTQVLRNCPTNTAIFVRPGKIHGIITANPENIQHILKTKFENYPKGERFINLLQDFLGTGIFNSDGDLWKLQRKTATYEFNTKSLRNFIVQNVTVETETRLIQILSKAAEKNEIIDLQDVLERFAFDNVCKLAFDVDPGCLGGNGTTGAAAFMAAFEDAAMLSSGRFMSLFPFLWKMKKIFNVGSERRLKESITTVHEFADEIIRSRMEAKESPTKGEDLLSRFIGTEEASPEFLRDIVISFILAGRDTTSSALSWFFWILSSRNDVKEKIIKEIETIRLKSGCTMTMFGYEELKEMHYLHAAITEAMRLYPPVPVDTKACLNDDVLPDGTRIMKGWFISYHTYAMGRMESVWGKDCNEFKPERWLDIDKDGVSVCRSESPFKFPVFHAEQCNTDEYKSTIIKVD